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# Rhodopseudomonas palustris BisB18, BisB18

>RPC_1389 DNA mismatch repair protein MutL
MPVRQLPETVVNRIAAGEVVERPASVVKELVENAIDAGASRIDIFTDGGG
RRRIGITDDGAGMTHADLTLAVDRHATSKLDDEDLLAIRTLGFRGEALPS
IGSVAKLSITTRHAAEPHAWALAVEGGAKSPIVPAALSHGTRVEVSDLFY
ATPARLKFLKTDRTEAEAIREVVRRLAMARPDIAFSMAGEERAPVTWAAA
LPGAAGRLTRLGDILGGDFRSNAIEVRSERDGVVVEGFAAAPSLTRANAL
GQYLFVNGRPVRDKLIIGAVRAAYSDYLPRDRHPVVALFVSLDSREVDAN
VHPAKTEVRFRDAGLVRALIVHALKEGLAREGKRTAANDAGATISSFRPS
FAPRANWDWRSSPSYPVAGSAAFDAAAGFAEREQSGFDVGAPSADVRSYQ
PSADFTDRPLGAARTQIHQTYIVAQTRDGLVVVDQHAAHERLVYEKLKAS
LATNGVQRQILLIPEIVELDEATVERLVARGEELATFGLVVESFGPGAVA
VRETPSLLGKTDAGALLRDLAEHMAEWDEALPLERRLLHVAATMACHGSV
RAGRVLKPEEMNALLREMEDTPNSGQCNHGRPTYVELKLSDIEKLFGRR
>RPC_2704 ATPase involved in DNA replication-like
MSTRRTEPQIAARRPRETTALFGHRDAEQALLAAYRSGRIPHAWLIGGAQ
GIGKATLAYRMARFVLAHPDPEAPAVRDAATLQVDASDPVARHIAAGAHG
GLLTLERTLNDKGVLRTMISVDEARETIGFFGSTAAIDGWRVCVVDTVDE
LNANAANALLKVVEEPPRRSLFLLISHAPARVLPTIQSRCRKLLLRPLAT
TDVIAAAALATDSDAADPLLAEAAAASEGSVARTLTLLGGDALNLHQRTT
ALLDTLPNVDPRALHALGDALGGVDRVALASFMDGVDRWVAERLRVDDPN
ANLPRLARLAEVWEKINRAARDTEAFNLERKPLVFSVFGLLAEAIR
>RPC_1567 recA protein
MAAPTALRIVEGSSMDKTKALAAALSQIERQFGKGSVMKLGKNDRSMDIE
TISSGSLGLDIALGVGGLPKGRVVEIYGPESSGKTTLALHCAAEAQKKGG
ICAFIDAEHALDPVYARKLGVNVDELLISQPDHGEQALEIADTLVRSGAV
DVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASINKSNTM
VIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIGQIKERDEVV
GNQTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVDKSG
AWFSYDSQRLGQGRENSKAFLKANPDMTAKIEAAIRQNSGLIAEQILAGS
PERDADGEEPIDE
>RPC_2813 single-stranded-DNA-specific exonuclease RecJ
MTPPATAIPIEQPPAFLGVARSATGRVWRDRLDPRGAARALAIAQRYQLP
EMLARVLAGRNVEIDAVEDFLDPTIRRLLPDPYSVTQMEAAAKRLADAVL
GAETVAIFGDYDVDGATSAALLAWHLRHCGLDPLIHIPDRIFEGYGPNVD
AVRMLASRGATLLITVDCGTTSLEPLAEAKRLGMSVVVIDHHQCGDELPV
VDALVNPNRPDDLSGLGHLAAVGLVFVTLVALNRELRARGFWTLERPQPE
LLNMLHHVALGTVADVAPLTGLNRAFVAKGLIAMRRRDHVGHTALMDIAR
LNGPPDAFHLGFLLGPRINAGGRIGRADLGVRLLLESDISEAAKIAAELD
RLNAERRVIEQMAEAQAEAEALAALGFEDKGSVIVTASEGWHPGVVGLVA
SRLKEKFSRPAFAIALEPGGIGTGSGRSIPGVDLGKAVRQAVSDGLLLKG
GGHAMAAGVTLRKEKLAEFRAYIEAALAADVARSRHANELFIDGAVSARA
VTPDLVATLNRAGPFGSGNPEPVLALPSHQLVYADEVGQAHLRLRFKSGD
GAIVNGIAFRSVGQKLGNALQENRGQPLHVAGCLTVDRWQGNERVQLRVT
DVAVPDPGPAVIR
>RPC_4436 NUDIX hydrolase
MKSDRRNLAEPSLAAGGIVLQSCAVPRLAIVRLRKRNQWVLPKGKLDAGE
TPRQAAEREVLEETGHRVLVHEFIGTLAYNTGGRSKVVHFWRMEATAEPT
LPLMDDVKEVAWLPLEVAVERLSRGHEQAFLTHVGPLALQAAADAAGDRD
GPRREPPAPVSPARMPLTALQRFWRWLRRA
>RPC_4522 phage integrase
MARGFGKLTVKTVEHLSRRGMHADGGGLYLQIAEGGSKSWLFRYKLHGRT
HWHGLGSLRDVGLEEAREKATGARKVRRNGGDPIQAKRQAEAAARIEAAK
AITFGEAAKRFIKANRSGWKNAKHADQWVMTLLGIDQKGKPSKNDYCKTI
RDLPIGAIDTTLVLRIIEPIWASKTETATRIRSRIELVIDAAKAKGEFNG
ENPARWKGHLDNLLPATSKVRKVRNHPALPYRQLPDFMRKLRERDGAAAA
ALEFQILTAVRPGNAVAAKWDQIDRRTSVWTIPSALMKSDAEHRVPLSKA
ALAVLDRMEATKDDSEYIFPNTKGKPLSDASMAAVIDRMNELKRHWIDPK
LDRGIVPHGFRSSFRDWAAEHGYDDPVAEAALAHKVSDEVVAAYRRTTFL
DLRNRMMEDWADYCARPFSSGDIVVAFRA
>RPC_2041 hypothetical protein
MSVHLAEVPEGTPIVIWFQDEARIGQKNGVVRQWARRGSRPRQPADQRYE
DAYLFGAICPARGTGAALALPQADTEAMQLHLNETSRHVAKGAQAVLLMD
RAGWHTTTNLDMPNNITPIFLPSRAPELNPVENIWQYMRANWLSNRVFES
YDAIVDTACEAWQRLVAQPDTITSIGMRDCAHVGQSQCRMNIDQAVLGFA
GAIVLIGLGFGWFVTPYWLLLPAFAEVNMIQASFTGFCLAAIVFKKLGAR
SGCAFS
>RPC_3685 ATP dependent DNA ligase
MARSHRGFPVTLDNLKLYRKKRDFEKTAEPSGEAKVAPSQRRRFVIQKHD
ATRLHYDLRLEFDGVFKSWAVTRGPSLDPHDKRLAVEVEDHPLDYGDFEG
TIPEGQYGGGTVQLWDRGYWEADDPERGFKTGDLKFTLHGEKLHGSWVLV
RMRNDRSGGKRTNWLLIKHRDDDAREGDANDILAQEASVASGRAMEEIAA
GKGRAPKPFMVKAARAKADAVWDSNRGLAAEARGEREAPAKRRAASRPAK
QAKAKQAKAKPAKRAKAKAVAAMPDFIAPQLCSSVERPPGGAGWGHEIKF
DGYRVQLRVEGGQATLKTRKGLDWTRKFRAIADQAAALPDAIIDTEIVAL
DAAGAPDFAALQAALSDENTDNLICFAFDLLFAEGEDLRALPLSERKQRL
QEMLEQARGRRKQSVIRYVEHFESGGDAILQSACKMSLEGIVSKKLDAPY
RSGRSESWTKAKCRAGHEVVIGGWKSNAGKFRSLMVGVHRDDHLAYVGIV
GTGFGQVMVKRIMPALKANASNENPFGGKTAPKKTAEVHWLKPELVAEIE
FAGFTGAGMVRQAAFKGLRQDKPAEEVEAETPKKTAVAEPGRGKRGGKAK
AGAAKPAASKPAAAKPGHPAQVMGVLISKPDKQLWPDASDGEPVTKLDLA
RYFEAVGDWMLPHIKGRPCSIVRAPDGIKGEQFFQRHAMPGTSNLLELVS
VSGDRKPYLQVDRVEGLAAVAQIGGLELHAWNCAPDAPDVPGRFVFDLDP
APDVAFSDVVAAAREMRERLTALGLESFCKTTGGKGLHVVTPLSKSKDNV
DWKQAKAFAQAVCRQMAEDSPERYLLNMSKKLREGKIFLDYLRNDRMATA
VAVLSPRARDGATVSMPLTWPQVKGDLDPKRFTLRTVPGLLAKSKAWAGY
DEAATPLKAAIKRLASSGTT
>RPC_1129 NUDIX hydrolase
MKLMQYGALPFRLTPSGPEILLVTTRNKRRWSVPKGWPIKHHSPHQTAEI
EAREEAGLEGSAHPRPVGRFKHRRVKRGEPVTCEVRLFPMQVIKQHEMWP
ERLQRERRWLPAGNAAAMVHKRGLKKAIRSLMKDELLKAEAARSDVPKSD
VQSVET
>RPC_3656 Resolvase-like
MVNKFKFVAYYRVSTRKQGVSGLGIEAQRAAVVGYLKDSTANVVAEFIEI
ESGRRHDRPALEQALATARIHRAALVVAKVDRLTRSVGFLSKLLEAGVDV
RFADLPAIEGPTGRFMLQQMAAVAELEAGLISSRTRAALSAAKARGQKLG
GNRGVIMSQHAQAEGRMMQANRAKERAADLAPLLDELRRAGLTSATGLAK
ELTNRCIPTARGGKGWSALQVIRVIAKMRSGHLPQFHLLQEGLVRNLE
>RPC_3294 DNA ligase, NAD-dependent
MTAKPKTAPTDLDTLSKAKAKVELKRLSLEIERHNNAYYQDDAPKISDAE
YDALRHRVEAIEAKFPELVSSDSPTQKVGAAPARGFAKVQHAVPMLSLGN
AFSDDEVAEFLTRVRRFLKLDAEQIPAIVAEPKIDGLSLSLRYEHGKLVR
AATRGDGFTGEDVTANVRTIKDIPHALAVAEPPAACELRGEVYMLKSDFL
ALNQRQETAGEPPFANPRNSAAGSLRQKDVAITASRPLKFFAYAWGEFSD
LPEATQYGMLGWLKRAGFTVNPLITLCKSVDDALAFYRKIGEERATLPYD
IDGVVYKVDRLDWQERLGFAGRAPRWAIAHKFAAEQATTILNGIEIQVGR
TGALTPVARLAPVTVGGVVVQNATLHNEDYIKSLDIHIGDTVVVQRAGDV
IPQIVSVVRDKRPEDAEPYEFPKFCPACGSHAVRDEDEGEAVRRCTGGLI
CPAQAIERLRHFVSRGAFDIAGFGETYVELLYEEGLVRNPADIFALHSKV
DELKAALFRKRESLATQREEKTGKKRKSSLSEEKRQYTDVENLLAAIDAR
RTVAFNRFIFGLGIRHVGEVTSKALVRHFADVKAFLDGVDAAALARPGPA
WLDLKNVRYIGEITLERLLEIQGGADTNEERQGFQPDARQRASLLSHYGN
EEKIAGALQAARSEAPGPAFQQLANDSEIGEVATQSLIDFFEETNNRQVV
TALMDQVQVERPAAASAKSPISGKIVVFTGALERTTRDEAKAIAERLGAK
VASSVSSKTDLVVAGPSAGSKLRDAQKFGVKVLTEEEWAEISGNE
>RPC_4846 recombination protein RecR
MAAAVAGPEIERLIQLLAKLPGLGPRSARRAALHLIKKREALMAPLASAL
QVAIERIQVCKVCGNIDTQNPCTVCTDPRRDPSIIVVVADVADLWALERA
HAASGRYHVLGATLSPLDGVGPDDLSIDALVARAHDPQVSEIVLALNATV
DGQTTAHYITDLLMEAGVKVTRLAHGVPVGGELDYLDEGTLSAAMRQRTL
F
>RPC_2397 histone-like DNA-binding protein
MAKKAATAKAATPTTVTLKHLAAALAEEHELSKKQTETILGDLVGRITKH
LKKGERIRIVGLGILQVRKRAARMGRNPATGEAIQIKASKKVAFRAAKEL
KEAV
>RPC_3044 IstB-like ATP-binding protein
MERTQLFDLMGELKLYGMKAAYDEIMTTAIKRQHEPQRIVGDLLSAEINE
KQARSIKYQLTIAKLPLAKDIDGFLFDGTPINQTLVNDLAGGGFIAQQRN
IVLIGGTGTGKTHLAIAIARSCIRSGARGRFYNVVDLVNRLEAETRNGRQ
GQIAEHLTRMDLIVLDELGYLPFAQSGGQLLFHLVSRLYERTSIIVTTNL
AFGEWPSVFGDAKMTTALLDRLTHHCDIVETGNDSWRFKNRDDDQIARAR
LVSATPTSSDEASATAQTRRPRGSKLDADAGSNLNAD
>RPC_0002 DNA polymerase III, beta subunit
MKVTVERAQLLKSLGHVHRVVERRNTIPILGNVLLRAEKGRLSLKATDLD
LEVTETLPAETATGGSTTVPAHMFYDIVRKLPDGSQIVLESDGERAVLAI
RAGRSRFTLQTLPENDFPDLAAGEMTHSFTLTAADVKRLIDRTQFAISTE
ETRYYLNGIYLHGAGTAAAATLRAVATDGHRLAQVDLPLPSGAAGMPGVI
VPRKTVGEVQRLIEDTEAAVGIELSVGKIRFTLGDVVLTSKLIDGTFPDY
GRVIPQNNDKELVVDKKDFEAAVDRVSTISSERGRAVKLALSAGKLVLSV
TNPDSGSATEELEVEYASDALDIGFNSRYLLDIAAQIEGEVAVLKLADPG
SPTLVQDRDAKGALYVLMPMRV
>RPC_0402 Excinuclease ABC, C subunit-like
MKYVYILESLDSEHFYVGIADDLRARLAKHNAGEVPHTSKFKPWRLKTYI
AFSDEDKAVAFEQYLKSASGRAFAKKRL
>RPC_0918 NUDIX hydrolase
MLETGPGVVGVDSEEFFGRARQRLGFEVPPALTDPSILPPSGDAGTDRMW
QIIAQERPVRPAAVLIAVVDHAEPTVLLTMRAAHLTDHAGQIAFPGGKID
AVDASPRDAALREAEEEIGLDRSYVDPIGYLDLYATGYGFRILPLVARVR
PGFELRINKAEVDDAFEVPLAFLMNPANHQLHSKEFRGAARSYYAMPFAE
RYIWGATAGILRVLYERVYLP
>RPC_4805 Holliday junction DNA helicase RuvA
MIGKLKGLIDSYGEDYVILDVQGVGYQVHCSARTLQALPQAGGAAVLSIE
TYVREDQIKLFGFRSDLEREWFRLLQTVQGVGAKVALAVLSTLPPADLAN
AIALRDKAAVARTSGVGPKVAERIVTELKDKAPAFASVDPAVVALSGALD
ERSAPRPVTDAISALVNLGYGQPQAAAAIASASRSAGEGAETAQLIKLGL
KELSK
>RPC_2244 DNA processing protein DprA, putative
MDNEQRTSHLSDAQRLDWLRLIRSDNVGPRTFRSLVNHFGSARAALERLP
DLARRGGAARPGRIVSEHEAHLELTASKRLGVSLIAPGELGYPPRLALIE
DAPPLLGIRGAPDALMRPMIAIVGSRNASGVGLKFAGALARDLGVAGFVI
ASGLARGIDQAAHRASLGSGTVAVLAGGHDKIYPPEHDELLAAILGEGGA
AISEMPLGHVPRARDFPRRNRLISGVALGVAVIEAAYRSGSLITARIAAE
QGRDVFAVPGSPLDPRAAGTNDLIKQGAQLITEAADIVTAVAPILERPIE
LPSREPDEAAPIDEPGSGDRARVTSLLGPSPIGLDDLVRLAGVSPAVART
VLLELELAGRLERHGGGLVSLL
>RPC_3939 transposase, mutator type
MTDDMMNLRSLVEKTPDADLLREMIGFAAQRLMEMEVGSLTGAGYGEKTP
ERLAQRNGYRDRDWETRAGTVELRIPKLRKGSYFPGFLEPRRMAEKALTA
VIQEAYVHGVSTRSVDDLVKAMGMSGISKSQVSRLCEEIDDKVKAFLGRP
IEGDWLYLWIDATYVKVRQAGRIVSVAVIVAVGVNSDGRREILGLDIGPS
EAETFWTGFLRKLARRGLRGVKLVISDAHEGIKAAVSKVFNATWQRCRVH
FMRNVLAHAGKSGRRVVSAFIGTAFAQDDAEAARTQWRRVADQLRPKLPK
LAAFLDEAEVDVLAYMSFPPAHRTKLHSTNPIERLNGEIKRRTEVVGIFP
NEDAIIRLVGAILLEQNDEWAVQRARYMTLETIAPIGDDPAVSLPAFAS
>RPC_2433 DNA polymerase III, alpha subunit
MWRPRSPPSSVPWIDTAPMTNAGFVHLHVHSAYSLLRGSIKVAKLCELAK
ADHQPALALTDTDNMFGALEFSEKMAGYGIQPIVGCELAVDFGDQDPNAR
NALSAAPSRIVLLAARERGYRSLIKLNSRAFLETPVNQTPHIKLDWLNGE
AEDLIALSGGPEGPISLAFTADQAGLAEARCDRLAALFGDRLYIELQRHG
VDAERRAEAALIDLAYAKGLPLVATNEPYFATNDDYEAHDALLCIAGGRL
VAETDRPQLTPDHRFKTRAEMAVLFADLPEALASTVEIAERCAFRPRTRK
PILPHFTLGAGTGSHAAAASSNEADEVRAQAEQGLIKRLQVHGVAKGATE
EEYRARLEFELGIITRMQYAGYFLIVGDFIKWAKENGIPVGPGRGSGAGS
LVAYALTITDLDPIRFGLLFERFLNPERVSMPDFDIDFCQDRRGEVIEYV
QRRYGRDQVAQIITFGTLQARGVLRDVGRVLQMPYGQVDKLTKLVPQNPA
APVTLKQAIESEPKLQAFRDEDPVVARAFNIAQRLEGLTRHASTHAAGIV
IGDRPLSELVPMYRDPKSDMPVTQFNMKWVEPAGLVKFDFLGLKTLTTLD
VAVKLLKQRGVVVSLPTVPLDDPDTFAMLGRGDVVGVFQLESQGMRRALI
DMRPDRFEDIIALVALYRPGPMANIPTYCARKHGDEEPEYLHPILESILK
ETFGVIIYQEQVMQIAQVMAGYSLGQADLLRRAMGKKIRAEMEKQRAGFI
AGSVEHGVPKAQADAIFELLAKFADYGFNKSHAAAYALVSYHTAYMKAHY
PVEFLAASMTLEIHNTDKLSEFRAEAQRLGIKLEAPSVNRSGATFEVADG
VIYYALAALKGVGAQAVELIVEGRKGGLFSSLADFAAKVSPKAINKRVIE
SLAAAGAFDGLNPNRAAVFGGADAIMAACQRHHEAAAMGQNDMFGGMADA
PTIMLPQLEAWLPAERLRREYDAIGFFLSGHPLDDYATALKRLRVQSWAE
FCRAVKSGATAGKVAATVVSRMERRTKTGNKMGILGLSDPTGHFEAVLFS
EGLAQYREVLEPGGAVLLQLGAELQGEDVRARILHAEPLDDAAAKTQKGL
RIFLRDTKPLESIAKRLQMPEAGGGGSATPASEPKRPGGDGEVTLVMMLD
LETEVEMKLPGRFRVSPQIAGAIKAVQGVVDVQTV
>RPC_2255 Holliday junction resolvase YqgF
MPAPILPLIEAAAQWPARGALIGLDLGTKTIGVAVSDPDRRLATGVETII
HTAFKANAARLLLLAGQRNAVGFVLGLPINMDGSEGPRAQSTRAFARNFA
RLTDLPIGLWDERLSTSAVERELIANDVSRAKRAKVIDEHAAIFILQGAL
DRLTVLNAAPRTD
>RPC_4854 ATP-dependent helicase HrpB
MLGPDEPPLTLAFDTPLPIDAVLDRLGSALAANNVAVLVAPPGAGKTTRV
PLALLDAPWLGAKKIIMLEPRRIAARASAERMAKTLGERVGDTVGYRVRF
GSKVSRATRIEVVTEGIFSRMILDDPELNGIAAILFDEFHERSLDADLGL
ALARDAQVGLREDLRILVMSATIDGARVGKLLGDAPVIESLGRAYPVETR
YLGRKPDAPLERQMAEAIASALRENPGSVLAFLPGAAEIRRTETMLRERV
VDASIEIVPLFGALDASVQDRAIQPAPKGCRKVVLATSIAETSLTIEGVR
IVVDCGMARVPRYEPDIGLTRLETVRASRAAVDQRRGRAGRTEPGVCYRL
WDEPQTASLPAYTQPEILSADLSSLLLDLAQWGVGDPAQLAFLDAPPAPA
LKEARALLAELGALDTEGRITDEGKSLRALALPPRLARMIVDAQRQGCGE
DAAAIAAILTERGLGGDSVDLDARLEQFRRDRSQRAISARQLAQRWAAPS
APSPLAGEGRGGGSTSTASVRGTPTPNPSPQGGGESRRARGEAAPSQQGA
GELTTGGMLALAFPDRVAKNRGNGSFVLANGRGAAIDKTAALARAPYIAV
AELTGTAANGRILLAAPITLEEIEARFAAEIDAVDDISFDRVALALRGRR
KRTLHAITLSEAPMAVVPSEATARVFADGLIAAGLDKLPWSKSLKQWRDR
VTFLRKAEGDASQKLWPDLSDAALAEAREAWLVPALFDKTALKDVSAGDL
SDALMGLLPWDLRARLEREAPTHFEAPTGTQLAIDYEAEQGPTIAVRLQE
LFGLTTHPSLAGGAVPLVLELLSPAQRPVQVTRDLPGFWRGSYAAVRTDL
RGRYPRHPWPEDPAGAPPTRRVKPRGT
>RPC_2571 DNA-3-methyladenine glycosylase
MSIGIMLKLYHSPARLAPPRFWVSMVDLRIPAALKLGPKLKRSFFARSVH
EVAPDLIGATLLVEGSGGVIVEVEAYHHTDPAAHSFGGQTPRNAVMFGPP
GVAYVYRSYGIHWCLNVVCEEAGSASAVLIRALVPTDGLALMRRRRGVED
ERALCSGPGKLAQALGVTIAHNGLKLDAPPFALHGRLAAPEIVAGPRIGI
SKAAELPWRYGLRGSKFVSKPFAE
>RPC_3722 Nucleoside diphosphate pyrophosphatase
MNDQQTTAAIIADQAAEVTISEPSLIGRGFMAYQRFDISLHRDGEPPLQQ
RRDLLRANKVAAVLPVDLARGEVVLIRQFRLTAHLVSGRGEMVEIVAGRV
DPGETPAEAAARECVEEIGAAPSRLVELFSVLPTPGITDESVTFFLGLID
ASNLPERCGLAEETEEIRPFAVPIDAAIAALDSGLVANALLVSALQWLAL
HRDRLQDYAKHPAA
>RPC_3658 phage integrase
MGAALGASILKSAQRSERGGGDRRYLTQPRGGGTTWYVVAEVPRTLQGVL
GKKRLLKSLETDDLRVARVARWNALATLKTQIAECRASTSKDGDPLLLEA
MAFREEFVRADAARRNELKHEIADRAEEIDLAAGAPREDYDPFDEGTPAS
RQATDFARLATGKATPADIYVDRWLSSSTYGERTKADARMAIGQFRSWCE
KSDQGFFIESITDRVASNFRDDFFVKAGAHPKTANKKLSALRQYWEWLDR
SFGVQPNPWMRKSLPKTRAHRVAPDGPLGPERPFTDDEIRKLLVGPADKD
LSNVMLIGALSGMRLEEIGQLRVGDCKDGLFSITRSKTAAGVRTIPIHSA
LDPLVEQLTGTRDVKSYLFPDFPNTGWDDNRTMAISKRFAYYRKKVGVDD
KRPGARRSKVNFHSFRRWFATKAEEAGHRENIVADIMGHEGNVGITFGLY
SNAQLKQLKKDCVESVELPK
>RPC_0180 Tyrosine recombinase XerC
MTKPLISAPAPLELPGAAADLVAEATRWLAYLRSERRLSPKTLEAYTRDL
RQCLTFLNEHWDAQVSIKRFAALEAGDIRAFMASRRADEIGGRSLMRALA
GLRSFGRFLEREGKGKVGALSAIRAPKVGKSLPKPIQIAGAKRLADATER
AGENREPWIWARDAAVMALLYGSGLRISEALGLKRRDVPLPGKGDTLIVT
GKGNKTRMVPVLQNVLSLIQDYVAVCPHPLPQQGPIFVGARGGPLSPRII
QLTMERLRGALGLPDSATPHALRHSFATHLLSRGGELRAIQELLGHTSLS
TTQIYTGIDSERLFEVYKTAHPRA
>RPC_0395 integration host factor, beta subunit
MIKSELVQRIAEHNPHLYQRDVENIVNAILDEIVAALARGDRVELRGFGA
FSVKHRPARAGRNPRTGAHVPVDQKSVPFFKTGKEMRERLNRDTGAPDSG
A
>RPC_4362 Radical SAM
MRSTSTALKHPPVPAPPTEPAGATTPFPQLEVAIDRQRRRGRGAQSNDSG
RFEAEARVAFDDGWQSLDELPPFKTTVGLDTARKVITRNDSPDIGFDRSI
NPYRGCEHGCVYCFARPTHAFLGLSPGLDFESKLFAKPDAPALLEKELAA
PDYEPKMIAIGTNTDPYQPIERDSKIMRGILEVLERASHPVGIVTKSALV
TRDIDILSRMAKRNLAKVALSVTTLDPKLARSMEPRASTPANRLEALRQL
SDAGIPTTVMVAPVIPALNDMEIERILDAAAHAGVKEASYVLLRLPLEVR
DLFREWLMANYPDRYRHVFTLIRDMRGGRDYDSQWGTRMKGTGPIAWMIG
RRFEIACAKLGLNKKRVKLTTDHFARPNRAGQQLSLF
>RPC_2251 NUDIX hydrolase
MTGDAAQCRPRLGCGAVVIRTDGKLLLGKRRRAPEAGCWGWLGGKVEWME
AVQDAVAREIREEADVEIRIVRLLCVVDQFETELTPPQHWVSPVYLADHI
AGDARVMEPGAIEALGWFDASSLPQPITHAVRVALPFLAGGKPADQSRSY
EAHRKAAL
>RPC_0339 endonuclease III
MAKTLKSLPAKPAASSNPVAKAAIRGIKPAVAGKAATPAAKAKSKPWTAA
EVREAFGRFAKANPEPKGELEHLNPFTLLVAVVLSAQATDAGVNKATRAL
FAVADTPQKMLDLGEDAVRDSIKTIGLYRNKAKNVIALSQKLISEFGGEV
PRSRAELETLPGAGRKTANVVLNMAFGERTMAVDTHVFRVANRTGLASGD
TPLAVELGLEKVIPTEFMLHAHHWLILHGRYTCLARKPRCEVCLINDLCR
WPEKTV
>RPC_0901 excinuclease ABC, C subunit
MIQHPTDTPEVAADAAAEPERAAGAAGATPQPSQDAVEPAADVDAATASL
AAEDDDEPVLPQVPEEAGDEVAAGPLAIGRSAIAQAVRLAPTSPGVYRML
NAASDVLYVGKAKNVKKRLASYARPTGHVVRISRMIAATVSVEIISTATE
TEALLLEANLIKQLRPRFNVLLRDDKSFPYILITGDHWAPQIIKHRGAQS
RPGRYFGPFASVGSVNRTITALQRAFLMRSCTDAFFESRTRPCLLYQIKR
CAGPCTGEIDFPGYTALVREATDFLSGRSRLVKQELAGEMEKASAELEFE
TAALYRDRLAALSAIQSQQGINPRTVEEADVFAIHQEGGYFCVEVFFFRT
GQNWGNRAYFPRAEKTFTVEEVLAAFLAQFYDDKAPPKQILLSHRIEECE
LLAEALCIKSGHKVEILTPQRGEKKELVGHALTNAREALGRKLADTATQT
RLLQGLVTTLKLPHTPKRIEVYDNSHIQGTNAVGAMIVAGPDGFIKNQYR
KFNIRSEGITPGDDYGMMREVLERRFKRLLAPPPEAEAGKPKPDDEVPQW
PDLVIIDGGRGQLNAVQEIFQALGLSTVTLMAVAKGPDRDAGRETLFMPD
RLPIKLEPRDPVLYFIQRLRDEAHRFVIGSHRKLRKKDIREAGLQEIPGI
GPSRKRALLHHFGTLKEIERASLGDLGKVPGISAESAKRIFDYFHPQPG
>RPC_2092 transposase IS116/IS110/IS902
MEQIIRIGMDTSKHFFQLHGVDAAEKPVLRKKLRRKEMLAFFAKLPPTPI
GIEACGAAHYLARELGKLGHVVKLLAPQHVKPYVKRNKNDGRDAEALCEA
MSRPTMEFVPVKTAEQQAALMLMGLRQQLIARRTQLSNAIRGYAAEFGLI
SPRGLDKIEPLLLRIAQDDTVPTLARELFALQGQDYARLQNELKVIDAKL
LAWHRADACSRRLAQIPGVGPIGASALVMKTPVPQTFASARAFAAWLGLT
PKDHSTAGKLRLGTITRAGDELLRSLLVAGATAVIQQVRRGRGRASPWLL
ALLARKPPKLAAVALANKIARIAWKLMLTGENYDGARMLNASPHAA
>RPC_2669 Xylose isomerase-like TIM barrel
MMIRFGVAGFPPAFKESKYRKNRFDVLHWLVDLQLDAFELQMTYGPRMTA
ENCVLFRQMSEATGVRLSVHASYFIVFTSDDPAKILQSEDTLKRTYEAAE
RLGARTIVLHPGPLYGASGSEPLERFVENTGNCLNSIGRTDIGLFVETAG
KVGQLGSVDEILEICTRLDGTFPCIDFGHVHARTLGTLEDPAAVDAIASQ
LELYLQSRDNLRIHFHYTPIHFGQRGEIQHRAIHDRYPPLAQQSLFGTST
PGEQSRDGLFHPRVEPVAAALARLCVASRMDFTVISETHDSQEEGAAALR
DAVICHNLGTRLDAA
>RPC_4057 putative transposase
MSVHLAEVPEGTPIEIWFQDEARIGQKNGVVRQWARRGSRPRQPADQRYE
NAYLFGAICPARGTGAALALPQADTEAMQLHLNEISRHVAKGAQAVLLMD
RAGWHTTTNLDMPNNITPIFLPSRSPELNPVENIWQYMRANWLSNRVFES
YDAIVDTACEAWQKLVAQPNTITSIGMRDWAHVGQSQ
>RPC_2745 UvrD/REP helicase
MPHGYLDGLNPEQRLAVEHGIGANTASPAPALLVIAGAGSGKTNTLAHRV
AHLLVDGADPRRLLLMTFSRRAAAEMSRRVERIVRKALGAQAGVVSDALT
WAGTFHGIGARLLREHAEQLGLDPAFTIHDREDSADLINLVRHELGFSKM
ESRFPTKGTCLSIYSRCVNAEAALDAVLGGSFPWCAGWSAELKQLFAAYV
EAKQRHCVLDYDDLLLYWAQAMADAGFAADVASRFDHVLVDEYQDTNALQ
SSILLALKPSGAGLTVVGDDAQSIYSFRAASVRNILDFPNQFSPRATVVT
LDRNYRSTQAILSAANGVIDLAKERFTKNLWTDRAAGAAPQLVGVRDEAD
QARYIVERVLDNREAGALLKQQAVLFRTSSHSGPLEIELTRRNIPFVKFG
GLKFLDAAHIKDLLALLRFVQNPRDRVAGFRLMQIIQGVGPTSAQRVLDH
IAEAADPIAALSEAPAPPRAAADWRDLVSTLLDLNRGAGWPAELERARLW
YEPHLDRIHEDAITRRADLIQLEQIAGGYPSRERFLTELTLDPPDATSDQ
AGVPMLDEDYLILSTIHSAKGQEWKSVYVLNVVDGCMPSDLGTGSSAELE
EERRLLYVAMTRAKDDLHLVVPQRFFTHGQNAQGDRHVYASRSRFIPDRL
LGLFERVSWPRVTAAAAAAQRQGPRLDIGARMRGMWR
>RPC_1966 transposase IS116/IS110/IS902
MEQIIRIGMDTSKHFFQLHGVDAAEKPVLRKKLRRKEMLAFFAKLPPTPI
GIEACGAAHYLARELGKLGHVVKLLAPQHVKPYVKRNKNDGRDAEALCEA
MSRPTMEFVPVKTAEQQAALMLMGLRQQLIARRTQLSNAIRGYAAEFGLI
SPRGLDKIEPLLLRIAQDDTVPTLARELFALQGQDYARLQNELKVIDAKL
LAWHRADACSRRLAQIPGVGPIGASALVMKTPVPQTFASARAFAAWLGLT
PKDHSTAGKLRLGTITRAGDELLRSLLVAGATAVIQQVRRGRGRASPWLL
ALLARKPPKLAAVALANKIARIAWKLMLTGENYDGARMLNASPHAA
>RPC_0001 chromosomal replication initiator protein DnaA
MTNIEQDRWSRVKGRLRSSVGEDVYSSWFARMDLESVQPESVHLSVPTRF
LKSWIQTHYSDRVLSCWQAEMPQVHRVDLTVRTAMRCAAPAKDAPAHAEP
RRDDGRPAPELRATAIAPVSATHEALGGSPLDPRLTFGSFVIGRSNTLAH
AAARQVAEGRRGDPVMFNPLYIHSGVGLGKTHLLQAVTWAGNSGTERKVL
YLTAEKFMYGFVAALKSQTALAFKEALRGIDVLVIDDLQFLQGKTTQAEF
CHTLNALIDAGRQVVIAADRPPSDLESLDERVRSRLAGGLVVEMASLGED
LRLGILKSRVTAARAHHASFDVPLPVLEYLARTITHNGRDLEGAINRLLA
HSKLNAQPVTLEMAEREIRDLVRPQEPKRIKIEDIQRVVARQYNVSRSDL
LSSRRTANVVRPRQVAMYLAKTLTLRSLPEIGRRFGGRDHTTVLHAVRKI
EGLVAKDTALSDEVELLKRQLQE
>RPC_3661 Excinuclease ABC, C subunit-like
MRMEDCFVYVLGCACGDRYLTYVGWTLDLDRRLAQHNAGSGARSTRGRSW
VLLHAERYASRSEAMSREWHLKRDRGFRKRLAQAAAGNIQKPHSGAELTS
V
>RPC_0210 conserved hypothetical protein
MRTFKLASLTAAALTLGLLASAPSMAQAPATTDHKSDHMAPMTKPSESKM
APAKAEATKTDLLDINSATVDQLDALPGVGKAYSAAIIKGRPYKGKDELV
QKKIVPEKTYDGIKDKIVAKQKS
>RPC_1460 Type II restriction enzyme methylase subunits-like
MGTASIPDVEQFISRWQGREGGQERANYVSFLNELIALLGLPKPDPADAT
HEHNDYVFERAVKKHKDDGASHGRIDLYKKNSFVLEAKQSRLKGVKKVAG
QNDLFNADVPEASRGRRGADRAWDVLMLNAKRQAEEYARALPASHGWPPF
ILVCDVGHCIEVYADFSGQGKNYTQFPDRQSFRIYLEDLRDETVRERLQK
IWTEPQALDPAQASAKVTRDIAKRLAQVSLALEKKGFVADDVAMFLMRCL
FTMFAEDVGLLPDKSFKTVLEECEKNPEAFVHDVGQLWEAMDLGAWAHAL
KTKVKKFNGEFFKNRAALPLGREEIGELRQAASYDWNEVDPSIFGTLLEQ
ALDPQDRKKLGAHYTPRAYVERLVVATIIEPLREDWRNVQATAETRRGAG
DLKGAAAAVQAFHDKLCATRVLDPACGTGNFLYVSLELMKRLEGEVLEAL
LDLGGQEALRGLGSHSVDPRQFLGLEINPRAAAIAELVLWIGYLQWHFRT
KGGPPDEPILKAFKNIQVKNAVLTWDGAPLPKIVDGKETYPNAKRPEWPA
AEFIVGNPPFTAGQDFRREFGESYAQALWLNYKHISGAADLVMYWWDRAA
ELLNRKGTALRRFGFVTTRTITHEFSGRVVARHLNANDPISIVLAVPNHP
WTRGRDAAAVRIAMTVVEAGHRNGLLQNVISESDLDADEPTILLEDRCGK
INPNLTIGIDLASAGRLRATDGICHDGVKLHGKGFIVQSAELEHLGLDRR
KGIEKVIRPYLNGRDINQRTRGLFVIDLFGLAEDEVRLNFPEIYQKLLLK
VKPDRDANPRPSRRDNWWLFGENQPKMRNAIASLGRYIGTVDTSRHRIFS
FLDEKMLCDDKVVIVASTDAFDLGVLSSRIHCTWSNKSGVRLGVGNDPVY
ASNRCFDPFPFPAANNIQKQTIRVIAEELDAHRKRVLKEHPHLTLTGLYN
VLERLRAGAAIAPSSASAARGAGGAGGDAGAVARGKTPHPNPPHRSAGGG
DQAAAAASAVPALTPDEQRIFDDGLVLILKELHDKLDVAVAEAYGWPADL
SDDEILAKLVALNKERAEEEKRGLVRWLRPDYQIPRFGKGLDKQAAREEG
AQVTADLIGVETVQKRAFPTVAVEQTAAVFAALAAASAPLDAKTLAAQFK
RTKTTEKKVGEVLASLARLGYVTSDDGMTFALRRVA
>RPC_2984 ATP-dependent DNA helicase RecQ
MTADPLQILKTVYGYDAFRGPQAAIVAHVMAGNNAFVLMPTGGGKSLCYQ
IPAIARPGMGLVVSPLIALMADQVTALRQAGVTAAALNSDLQGDERHALW
RDISSGGLDLLYVAPETLLRPDILELLRRTPLSLIAIDEAHCLSQWGHDF
RPSYRQLDALVTQFPDTPRMALTATADAPTRAEILSHLKIAKSDAFVAGF
DRPNIHYAMAEKDNPRAQLKRFLKQHERDSGIVYCLSKRKTEETATWLCE
EGYNALPYHGGMDKAQRQTNQTRFQREEAVIMVATIAFGMGIDKPDVRFV
VHLDLPGSIEAYYQETGRAGRDGLPSDTLMLYGHEDIALRSRFIEESDAP
EQRKRMERQKLDALLGLAETAGCRRQVLLSYFGDHSAPCGNCDTCAEPPQ
RFDGTVATLKALSCIYRTGERFGQAYIVQVLLGVADDRIAQSGHDRISTF
GIGKEHDSRTWRAILRQLIALRLIAVDLTGHGGLSISEAGRRFLREKPVL
MLRVPAKPRATQAKGVRAQASTALPEADRTLFQALREKRTELARMQNVPP
YVIFHDKTLIEMAAARPGSRSQMAKVPGVGEAKLDRYGAAFLAVIAEHGR
>RPC_0906 conserved hypothetical protein 95
MRVVGGRLKGRNIASPTSRDIRPTQDRLRESLFNILMHAYGNPMLDARVL
DLFAGTGALGIEAVSRGAKFALFVDNGAEARALLRNNVEALGLGGVTKVY
RRDAGNLGPAHPVEPFALVFCDPPYRMKLAEKALISLRDGCWLIPDALVV
VEEAKDAAFAAPAGFDELERRAYDDTEFTLLRFGAKAV
>RPC_2706 TatD-related deoxyribonuclease
MLIDSHCHLDFPDFADDLDGIVARARAAGVARMVTISTRVRRLPELIKIA
ERFDDVYCSVGTHPHHVDEEDGISVDELIEHTKHPKLVALGEAGLDYFYE
LGSREAQHRGFRVHIAAARATGLPLVIHTREADDDCAKILREEMANGPFK
AVLHCYTGGRELAMTAIELGLFIGFTGILTFKKTQALRDLAAELPAERIL
VETDSPYLAPGKFRGKRNEPSYVVETAKLLAELRGVSLDAIARQTTENFF
ALFNKVPRPAEVA
>RPC_0320 protein of unknown function UPF0102
MAKSSDARSPAPHAAAPERVAAFRTGISAEARAAAYLIAKGYRIVARRFR
TPYGEIDLVARRRNLLAFVEVKARAKLDDAAYAVTPRQQQRIIDAAQAWL
MAHPEHADFELRFDAVLIAPKSLPRHLPAAFDASP
>RPC_4507 transposase IS200-like
MDEYESLSHSKWECKYHVVFIPKCRRKTLYGELRRHLGELFRKLAQQKES
RIQEGHLMPDHVHMMISIPPKYAVSQVVGFIKGKSAIHLARVYGEKKRNF
VGQHFWARGYFVSTIGRDEAVIREYIRQEDRRLEQLNLWR
>RPC_0168 NUDIX hydrolase
MTRYDDLPYRTCVGMMLLNAEGLVFIGRRLGGIEHVDETHVWQMPQGGVD
PGEDPWTAAKRELYEETSVRSVEKLGEIADWLIYDIPRTVAGRSWKGRYR
GQRQKWYAVRFTGDDSEIDVVSPGGGHKAEFISWRWEPMQNLPDLIVPFK
RPVYERVVKEFAALAKDAAKVSGGG
>RPC_1266 Excinuclease ABC, C subunit-like
MAGLVPAIHVGQICWMRAGYVYFLTNRPNGILYVGVTSDLARRVYEHRTG
AVEGFTRRYGLKRLVYFEVYDDIRLAIQREHNIKHWSRTWKVRLILANNP
EWNDLFETL
>RPC_2061 transposase IS116/IS110/IS902
MEQIIRIGMDTSKHFFQLHGVDAAEKPVLRKKLRRKEMLAFFAKLPPTPI
GIEACGAAHYLARELGKLGHVVKLLAPQHVKPYVKRNKNDGRDAEALCEA
MSRPTMEFVPVKTAEQQAALMLMGLRQQLIARRTQLSNAIRGYAAEFGLI
SPRGLDKIEPLLLRIAQDDTVPTLARELFALQGQDYARLQNELKVIDAKL
LAWHRADACSRRLAQIPGVGPIGASALVMKTPVPQTFASARAFAAWLGLT
PKDHSTAGKLRLGTITRAGDELLRSLLVAGATAVIQQVRRGRGRASPWLL
ALLARKPPKLAAVALANKIARIAWKLMLTGENYDGARMLNASPHAA
>RPC_4857 DNA polymerase I
MPKTSEHAASSVAVKAPSKGDHVFLVDGSSYIFRAYHALPPLNRKSDGLQ
VNAVLGFCNMLWKLLREMPNDERPTHLAIIFDKAEKTFRNELYPLYKAQR
PPAPDDLIPQFALIREAVRAFDLPCLEQIGFEADDLIATYVRQACERGAT
ATIVSSDKDLMQLVTDCVTMFDTMKDRRIGIPQVIEKFGVPPDKVVEVQA
LAGDSVDNVPGVPGIGVKTAAQLINEYGDLDTLLARAAEIKQPKRREALI
ANAEKARISRQLVLLDDKVALDVPLDELAVHEPDARKLIAFLKAMEFSTL
TRRVAEYSQIDPADVEADAAVKSGTSSPSPLAGEGRGGGATDAGDLFGAP
PSPTLPRKGGGSAPQTGQGLASSAPQSSDALTPQLLAAARAEEARKIPVN
RDGYATLRTRDELHGWIAKIHDLGHVALEAKATFDIKSAVVDPMQAELTG
LALALGPNEACYVPLGHRQSGDAAGLFASGLEPDQIAARDALEALRPILE
SPGVLKIGFNIKFTAVLLAQHGITLQNADDVQLMSYALDAGRHAHGLDAL
AETWLGHKTLSYGEVIGSGKAKLSFDQVAIDRATCYAAEDADVALRLWRV
LKPRLVAERMTTVYETLERPLIGVLARMERRGISIDRAVLARLSGDFAQT
AARIEAEIREIAGEEINIGSPKQLGDILFGKMQLPGGSKTKTGAWSTSAQ
VLEELAEQGHEFPRKILDWRQVSKLRSTYTDALPTYVHPQTHRVHTTYAL
AATTTGRLSSNEPNLQNIPVRTEDGRKIRRAFIAAPGHKLVSADYSQIEL
RLLAEIADIPVLKQAFQDGLDIHAMTASEMFGVPIKDMPSEVRRRAKAIN
FGIIYGISAFGLANQLGIPREEAGAYIKKYFERFPGIRAYMDATRDFCRA
HGFVETLFGRKCHYPDIKASNASVRAFNERAAINARLQGTAADIIRRAMV
RMEDALAEKKLSAQMLLQVHDELIFEVADDEVAATLPVVQQVMQDAPFPA
VLLSVPLQVDARAANNWDEAH
>RPC_3542 UvrD/REP helicase
MMGTSQWQPFTIADEDIIWASQMIGLGPDGFAKVGNDESRLAAIRNLDSA
DFEACPGSGKTTLLVAKLAILANRWRWRRQGICVLSHTNAARNEIGTKLS
SSPIGGALLRYPHFVGTIHAFVNEFLSVPWLRSKGNLIKAIDTQIALKHR
MGLLGRNWKAAMEARHLTEFALMYGRADYTADNKGNLGAATPLARAMVAA
TKSSSEAGYFCYDEMFVWANELLDTRPEVAAALRERFPLVFIDEAQDNSE
LQSALLHRLFLEGDNPSRRQRFGDSNQAIYSSVDDKAGAHTDPFPSQIRF
DLPRSYRFNQTIANQVKGLGVIPQQLIGAGPGASVVKTEPKATTVILFDD
ESMSNVLPRYGAHLVEQFTENELRAGVFVAVAGVVKEPEQPDPVPRFIGN
YAPTFDPACGRRDSLQTTFAQYLARARFEMNKLRDVSSLVNATASAVLRL
ADIAGADLSLYSRKSPHRRVKELLDGKAADYNALIELVLVHKGDLSKAEW
EESGKALAVSVAKAIAGNAPPTTNAFLAWPEHGSGSEVEEESVATRTDNL
FSYPPDGPKVHVRLGSIHSVKGETHTATLVLESYFHDHHLSELKAWLLGA
RSGGFKKGNKMEGPRLLGRLRLHYVAMTRPSHLLCIAMRKDAFTEAETTI
LRDRGWLIIDCCSAPEAIAKPT
>RPC_1732 conserved hypothetical protein
MVVARLANALQIAALDDAAAKAGLDIGLPLANARAICPDLMVFDADPAAD
AHALESIAAWCDRFTPLVALDAPDGLLLDITGCAHLFGGEALMLQSVSRA
LTVQGFAVSAAIAGTAVAARTLSRYQHGCIVSVGGEADAVSALPVAALGA
DPAISHGLRRAGLKTIGEVATRARPEITARFGAAFTSLLEQAQGLRDAPI
SPRQPLPDYIVEKRFAEPVATDTVIATTLSALASTLVEAMTRHGKGARQL
KASFFRSDGAVRAVDVQTGQPVTKAVVIDRLFRERLDAIADPLDPGFGFD
LIRLSASQTEIVVQQQRDLDANVHDNDELSALIDRIAARIGGRRVVVHLP
RDSHIPEDAAWASSAQQHLVEAAQAAWPARIAGEPPLRPLRLFAHPEPIK
VIAEVPDGPPARFRWRRVSHAVVRVEGPERVAMEWWRSDAALLTRDYFRV
EDETGLRFWLYRDGLYERELSADEEGESARPNWFMHGLFA
>RPC_4359 phage SPO1 DNA polymerase-related protein
MTPEPRPNARELLAFYLEAGVDCALMDEPVNRLLDDIAPEPARPPAEPRL
VSPQPQPATPRAVPTAAAPALAPDAAILSAREAARTAPSLQALRELLAAF
DGCALKATATQLVFADGNPQARIMLVGEAPGREEDIEGLPFVGRSGKLLD
RMLASIGLDRSTVYIANVIPWRPPGNRTPTPQETQTCLPFTQRQIELVDP
DLLVTLGNPSTQTLLATREGIMKTRGRWVDYDTGSRRIRALPTFHPAYLL
RSPSYKRMAWQDLRAIAKALEDLPPKA
>RPC_3653 type I restriction enzyme StySPI specificity protein
MTGDLPSGWVAAPIDDLRALEPNAITDGPYGSSLKTSHYRSSGARVVRLG
NIGFRRFLSADAVYISEDHFKALVKHHVRAGDVLIAALGDPVGRSCIAPS
DISPALVKADCFRLRCSPHLSAPFIMLWLNSECAREAFSSAAHGLGRVRI
NLSDFRTTVVPVPPATEQGRIVAKIDNLSAKSKRSRDHLDHIPQLVEKYK
QAILAAAFRGELTHEWRVNNLDQKWPWPECSLSDIANIGTGATPKRGEQR
YYSNGNIPWITSGAVKHAVVQAADEYITEAAVRETNCKVFPAGTILMAMY
GEGKTRGRVTVLGINAATNQAVAAIQVRADSPAVRDFVVWHLRSGYLELR
ERAAGGVQPNLNLGIVNAWRIPLPSRDEQMEVVRRVQKAFAWIDRLTIET
TSARKLIDRLDQAILAKAFRGELVPQDPNDEPASILLERIKAKRAGSAGH
TRRRSARATS
>RPC_0029 nuclease (SNase-like)
MYPYFRTNPARIARSPWRGRFSAALPWVFVLGMAAGTMLPARHWIHWPFP
SATDSSSSAQRDRESEAIWQRAGSAGARHPVDVIRTIDGDTFEARVHLWP
GLDMTTRVRLRGIDAPELKAQCAQELKQAEAAGEALHALLGEGEVTIYNI
GPDKYQGRVVADAATKRTPNLSAALLAGGYARAYEGGHRNGWCAGR
>RPC_4887 protein of unknown function DUF450
MADEFGDRLIGFAKRYVGIAERCNNEESTKMFLVLPFISFLGFDVQNPFE
VCPEHAADFSDKYKNRVDFAILQDDLPIVAIECKCCGAPLKDERGQLRSY
FNAAPTVKMGLLTDGVVFEFYADSDEPNMMDEKAFLTVNLRDIANGRLDE
SVADGLKSLQKGQFNPENIGAEAKRKLVFQKFLQEITLLAERPSESFTRM
LLRAVNIQHVRDKSLPEYQDLVGTAFREFVNVKILQRLELTKAAPPAALV
QTEASAAPEAAKEPGTVLPSDTELEVLTFVKRRLSYLADDELLFDAAQRI
EFTSYKGKLVVFFGRERRGRLFDFFEGGTRGPKYRFVFADNPEEIVTDKL
AGAILDGPLLQIFKRRVNGDAPPQPVATSTVIAMNPR
>RPC_3295 DNA repair protein RecN
MLARLSIRDIVLIERLDIEFARGLAVLTGETGAGKSILLDAFALALGGRG
DAGLVRHGAEHGQVTAAFDVARGHPAFAILAANGLDDASPDDSSEMILRR
VQLADGRTRAFINDQTVSVQTLKAVGASLVEIHGQHDERALVDAATHRRL
LDAFAGLEKDVAALETLWDARRAARATLDAHRAGMERAAREADFLRHAAD
ELKKLNPKDGEETSLAERRTTMMQGEKIAGDLREAQEAVSGHHSPVASLA
AAVRRLERRAGNAPALIDPAVKAIDAAINALEEADQHLTAALIAADFDPL
ELERIEERLFALRAASRKYSTPVDALAELAKKYAADVALIDAGAGQLKAL
EEKAAEADSRYAAAAAKLSASRAKSAEKLNKAVAGELAPLKLERAKFMTQ
VETDPGAPGPQGCDRVEFWVQTNPGTKPGPLMKVASGGELSRFLLALKVV
LSDKGSAPTLVFDEIDTGVGGAVADAIGARLARLASKVQVMAVTHAPQVA
ARADQHLLISKDALDKGKRVATRVDALQADRRREEIARMLAGAEITAEAR
AAADQLIKAAG
>RPC_0377 formamidopyrimidine-DNA glycosylase
MPELPEVETVRRGLEPAMAGARIDGFEARRADLRFALQPDLATRLIGQTV
KGLGRRAKYLLAELSSGDVLLMHLGMSGSFRVLQGEASGAPGAFHHPRND
DRAHDHVVFRMSNGAVVVFNDPRRFGYMKILAPGEIADEPFLKGLGPEPL
GNSFDAAMLASACAGRKTSLKAALLDQRVVAGLGNIYVCEALFGAHLSPK
RLAATLATRTGAPTERAERLVEAIRAVLHAAIKAGGSSLRDHRQTSGELG
YFQHSFAVYDREGEPCRSKGCDGVVKRFVQNGRSTFWCPKCQK
>RPC_4848 DNA polymerase III, subunits gamma and tau
MTDAGPPVIPPSDPVSAAPSAGTPYRVLARKYRPNNFEDLIGQDAMVRTL
SNAFETGRIPQAWILTGVRGVGKTTTARILARALNYEMPDGSVTAPTIHM
PVPGVHCQAIMESRHIDVLEMDAASHTGIEDVRQITDGVRYSPTSARYKV
YIIDEVHMLSDKAFNAFLKTLEEPPEHAKFVFATTEIRKVPVTVLSRCQR
FDLRRVEADVLMAHLANIAGKENVEVEPEALGIIARAAEGSVRDSLSLFD
QAIAHAAGTVRADAVRQMLGLADRTRVIDLFAHLAGGDIASAFGEFREQY
DVGADPVVVLSDLAEFVNFVTRVKIVPATAENVAFGETERLRAREFAAKL
SMRVLSRMWQMLLKGITEVQGATRPAAAAEMVLVRIAYVADLPTPDEAIK
MLQDGGPASASAASAAARNGASASSSSNSSSGSPASAMASARMSSAPRGG
AEASLRPQLSASQPAAAAAPVLTINSFPELVALAAEKRDVMTRVALEADV
RLVRIEDGRLELAMERSAARTLINDLSRKLEQWTGRRWTVIVSNEEGQPT
LRSQALAQQSERERAAEADPRVQEVLARFPGAKVLEVRRLAPETPDADAP
EADATGEDSPETLDNDDQ
>RPC_1345 methylated-DNA--protein-cysteinemethyltransferase
MTPSGFTLFDTAIGRCGVVWSAQGIVAVQLPQHTEEQTRARIDQRYPGLN
EAAPPTQVGRAIDRIVALLAGRSVDLSDIALDQAEVSEFQRRVYAIARAI
PPGNTLSYGDIAKRLGDVALSREVGQALGRNPCPIIVPCHRVLAAGDKPG
GFSANGGVATKLKLLSIEGARVNYTPSLFD
>RPC_4076 ribonuclease H
MSALPAVRVHTDGACSGNPGPGGWGAILKFGEIEKQLKGGETHTTNNRME
LLAAISALEALTKPCTVDLYTDSQYVRQGITAWIHNWKRNGWKTADKKPV
KNVDLWQRLDAALKQHDLRWHWVKGHAGHDENERADQLARDGLIEHKLKS
KIG
>RPC_3938 Superfamily I DNA and RNA helicases and helicase subunits-like
MQVTNGGRGVHAREVKGVERLKSLPKDWYAFTNLELATGLGRSRELDVIL
VTDHMILLVDLKDWSGAIESDSGNWLHNGRDTGPSPVAKIHSNVKDVLRL
LTAQLRSRLESKSAPIPKIVGVVVITGKANLSKIAATERSSVFEIDDFLK
TLGSEKLRRAAFGNVAPQIVAEPLTDAVWKDRLFKFFNVKAGSFKPGRSR
YDRYVATSDQASFQHPNDIYREYEAEEENTPQNLGTLRLWNFANCMDGRF
QTEEGRAEIAGREGKVFYYLRDRNEDCENWILVPKAADPNRSVNYWEVYD
RRRRLKRLRDFISSEGANLSILDRIELVRQILARVAALHTSEAAHLDLGS
HSVWLEAPSTVRLSHLLAAKFPEVASLGKARYQFLSTVTAPEDVLGDEFS
AKAKDVFLAAIAAHEILFGRVPDSSSPGNPPDWNASVDGDRAFEPLHHWF
ANALETDPARRFPDAVAALEAFNAATASRPTPKEVIEGLERFRGGIRSQR
QLIGTYPAVEEISATDITEIWRSQQDESPVKVKMWKRQAWGDQSREGPRI
LDFLNRALDLKLSPPQGCAAIRDVLWLGDAIVLVQDWIGGDTLASSLASK
PDSWLDPHASLTFLVQLVETVTELHARGAAHGDLKPDNIIVRDAETREPV
LVDTIDFTPASDGDIASSAYAPEAGSRQERDNFAVTKIVEEVLAKCPINP
RAAVAVASAIATCRNNVPQNATLLPLIDALDAALVPDAEAPRLSIALSIW
SAETGPVFPDEGRLYLRARGDVSALVIRGIGEEIEIRLDVKGVPFSGRRR
TVTQGWIARVSKYEFKSIAADLTVVSSDFNDFSELAALLEDSDVREALGG
AKEPKRADVADEEEPGDREELGDVAEDVLVEEIVAAPAAVRTVDIDVPEL
WRSLIGVEAELTTEGLALSEGFFDRNLRRHVVPFELSSGTFDFDRADTVG
VQKLDAKGVWRRVGELDTARSKPGVVVIDPTEYANPNQTRLIEENQRLRF
TSHFELQSLRRREGAIEKVLSRQARVPGLIDVFDPRQRLLPVTAPCALDD
TLVEAYGLNPSQKEAMSALLGVRPLGLLQGPPGTGKTKFIAALTHYALAK
GLVRNVLLASQSHEAVNNAAESVLALFRRSGGDPSILRVGAEGVVSDRLL
PYHTERVELLFKDRFRAQQTERLRIAGAALGLPEGLVDEFLFVETAVRPV
CERIAELLGSAGSDASRVDGLRQTLRAHLAHLGLPDDLTGIEGDITAFID
KSVGALVERRKGEPGVNAANAARLRTAGKIARDFVTSASTAQRSFEPFLA
GTRQIVAGTCVGLGRPSLGLTSTPFDLVVVDEAARCTASELSVPLQAGRW
IILVGDQAQLEPQHKPEVVQQVGARTGFAKGEIIRSDFDRVFATAYGSVA
GKKLKTQYRMLPAIGRLVSDTFYPEIKLEHGRDKPEIDPSVLPSDLGVPL
TWIATDSFGDQGFESLEAGGTSRINRVEADCLLTLLTQWYEHEPFRDWLT
TQTKYPHGVGVICMYAAQRDHLRNRLLKAPHGDTLLRHVKVDTVDSYQGK
ENPIVILSLVRNNADGPQRSGVATVREGFLSRSNRINVSISRAMDRLVIV
GCNARWPQGGPMRRLADNFGNALGGGEAALVHASDLLSAKKAPRAKKSER
G
>RPC_0278 exodeoxyribonuclease III (xth)
MRFSLSTWNINSVRLRIDLVAKFLESERPDVLCLQETKCPDDAFPLKRFK
RLGYEHVALNGQKGYHGVAIISRLPFASTDVRIFCENLDSRHISVAFAAE
HTSAPLVLHNFYVPAGGDIPDPELNPKFKHKLAFLDEMKSCEPLHPQGDA
RHILVGDLNVAPHEHDVWSHKQLLKVVSHTPIECEKLLAAQHQGGWLDVA
RERIALSDKIYTWWSYRAADWTIANRGRRLDHIWVSPALGPCVQDYQVTR
DARGWERPSDHVPVTVTMEL
>RPC_1377 RelB antitoxin
MARRPAKTGYINARVEPKLKKQAEAVLDKIGLSTTDAVTIFLKQLVAQRG
LPFSVNVPNRETIKAMRDIEQGRTESFSGTPEQLFAHILGNKSR
>RPC_4898 methylated-DNA--protein-cysteinemethyltransferase
MGGRAYTVFDTVVGRCAIAWSAAGIAGVQLAEAREIETRRQLLRRCPDAR
ESRPNPDVEAAIDGLKALLRGEPADLSNAALDMAEATPFHRRVYELVRTI
PRGETLTFAEIATRLGASGAIHSVGQALSKNPFALLVPCHRALPARGETG
GTPSCGGMVSRYRLLSIEGALTGRGPTLFDALLSAPPRSTG
>RPC_3311 DNA-directed DNA polymerase
MTAAAPSPARGFCRDCLAEQDGAAALRCVACGSPRLLRHARLGALTLAHI
DCDAFYATVEKRDDPAIADRPVIIGGGKRGVVSAACYIARTFGVRSAMPM
FKALALCPDAAVVRPDMAKYVRVGREVRQAMLALTPLVEPLSIDEAFLDL
SGTERLHGMIAAKVLARFAAKVEREIGITVSVGLSCNKFLAKIASDLDKP
RGFAVLDQDDARAMLTDRPVGFIFGVGPATEQRLIARGYRLIGDLQRAAE
ADLMKQFGAEGQRLWRLARGIDDRKVVPDRGAKSISNETTFETDIRDLAT
LEKVLWRLSEKVSSRLKSADLAGSTITLKLKTADFRQRTRAQTIHSPTQL
AGKIFALSREMLAKEIDGTAFRLIGTGVSALTPGSAADDTDMLDARAAHA
ERAMDDLRKKFGTAAVIKGIAYEGPEKRDQRE
>RPC_3651 type III restriction enzyme, res subunit
MRSSANFGFLGDHDVRLAQLGALAESYFRDDPTTSIFKLRQFAELMSKLI
AARHAAYRDERESFEETLRRLSFERIIPKEAADVFHALRKSGNRAAHDIA
GTQSDALTALKLARQLGIWFHRTYGKQPDIAFGAFVPPPEPIDATVALRE
EIAALGRRLTESEDAAAGAQREAEEHARARETLEQRLAREAEERAIWEKL
AQDIENEKAEIAARLAALQAVAEHTPAADILQLVQRAEVASSKIDLDEAT
TRALIDQQLRDAGWDADTKALRYSEGVRPSKGRNLAIAEWPTSSGPADYA
LFIGLTLVGVVEAKRKRKNVSAAIDQAERYSVGLAARADFTFAGGPWTDH
KVPFVFAANGRSYLKQLETESGIWFRDTRRAANHRRALVSWLTPSGLSGL
LEVDQDAATDALKTLPFDFGFPLRDYQQAAITAIEKGLEAERRSMLLAMA
TGTGKTKLAIAMLYRLLTTKRFRRVCFVVDRSALGIQAAGEFTTTKIVSG
KAFADIFGLKKLEDVTPETETKVHICTIQGLVKRVLYAADTSEAPPVDQY
DLIVIDECHRGYLLDREMSDAELSFRGQDDYISKYRRVLEYFDAVKIGLT
ATPALHTTEIFGEPIFKYSYRDAVIEGHLIDHEPPVRIETALARAGIVFE
KDEQLELLNTRTGEVDLAHAPDEIRFEVEQFNKQVVTPDFNRAVAEELAK
HIDPALPGKTLIFAATDAHADIVVAKIKDAFAAAYGEIDDAAVKKITGSV
DRVQKLIRSFRNEANPKIVVTVDLLTTGIDVPSITNLVFLRRVNSRILYE
QMIGRATRQCPDIGKEVFRIFDAVDLYPHLQNLTDMKPVVVNPSISFEQL
VKELVEAEQHAHRESIRDQFAVKLRRRLKKLPEEARARFEAAAGETPEQT
LKRLLENGPTEFAKWLSSHSAIGPILDWQSDGDTPRFMPISHHPDQVVAV
TRGYGEASKPEDFLDGFSAFVRDNVNTIAALKLVVQRPRDLTRAGLQDLR
RALDLKGFSEANLRRAWADAKNQDIAASIIGFVRQAALGDPLTPYGDRVR
VAMQKVMASRAWTEPQKRWLTRIGEQITKEIVVDRSTIDREPFIADGGFT
RLNKVFGGELEAVLAGINEEMWKKTG
>RPC_2677 integration host factor, alpha subunit
MTGTGKTVTRVDLCEAVYQKVGLSRTESSAFVELVLKEITDCLEKGETVK
LSSFGSFMVRKKGQRIGRNPKTGTEVPISPRRVMVFKPSAILKQRINANG
AAAPTKTD
>RPC_2236 NUDIX hydrolase
MSDTANVDIEAEHHPYFRPKDAATLLLIDRTGRVPKVLVGRRHDNVVFMP
GKFVFPGGRVDKTDCRIPVAAPLPAGLEANLLQGRPLISRARARALAVCA
IREACEETGLCLGRKVHGAAALDGPWAPFAQAGLLPDPSGLFLVARAITP
PGRVRRFDTRFFTADASMIAHRVEGVIHPGAELVELVWVEIGSEPLAGLH
QMTRQVLGELERRLASGPLRHDAQLPFFHVARGRMQMDLLSGTA
>RPC_3405 protein of unknown function DUF1568
MVRYRRNGLPGGRYFFTVTLADRRSTVLVDRVAELRTAFRAARRERPFAI
DAIVILPDHLHAIFTLPSDDADYSGRWRRIKGHFSSALIAAGVRLKRRPN
GDLALWQSRFWEHTIRDENDFAQHIDYVHFNPVKHGLVPRVVDWPHSSFH
RYVGEGLLPADWAGYARDIGGDFGERCGD
>RPC_4368 A/G-specific adenine glycosylase
MPVSPARQKARRQAAPGSAYPRLLLAWYDRHRRALPWRALPGQAADPYRV
WLSEIMLQQTTVKAVGPYFEKFLARWPNVAALGRASQDDVLRMWAGLGYY
SRARNLFACAVAVSRDHGGAFPDTEAGLRALPGIGPYTAAAIAAIAFGRH
CMPVDGNIERVVSRLFAVEDALPQAKPKISELALTLAGEARAGDSAQALM
DLGATICTPKKPACALCPLNEDCVARSRGDQETFPRKAAKTTGKLRRGAA
FVVRRGDELLVRSRAEKGLLGGMTEVPGSDWIADQDDTIARQQAPALPGV
ARWQRKPGVVNHVFTHFPLELVVYTATMPARSRAPIGMRWVKIATLQHEA
LPNVMRKVIAHGLGDGKPIRR
>RPC_0604 IstB-like ATP-binding protein
MLTRDNTPAPITVDLARLPMLLTSLRLPTIGQMWADLAERSDREGWPAAR
YLAALLEHELAERYQRRIQRNMQDAHLPAGKSFATFDFAAVPMINKSQIT
ALAAGGSWLDKGANLLAFGPPGVGKSHLGAALGQALIENGYRVLFTRTTD
MVQRLQAARRDLTLQNVMEKLDKYDLLILDDLSYVRKDQAETSVLFELIS
ARYERRSLLITANQPFGGWEEIFPDKAMTVAAIDRLVHHAVILEMNTDSY
RRKAAVTRMTDRKASENSKQKPVTKTI
>RPC_4491 IstB-like ATP-binding protein
MLTRDNTPAPITVDLARLPMLLTSLRLPTIGQMWADLAERSDREGWPAAR
YLAALLEHELAERYQRRIQRNMQDAHLPAGKSFATFDFAAVPMINKSQIT
ALAAGGSWLDKGANLLAFGPPGVGKSHLGAALGQALIENGYRVLFTRTTD
MVQRLQAARRDLTLQNVMEKLDKYDLLILDDLSYVRKDQAETSVLFELIS
ARYERRSLLITANQPFGGWEEIFPDKAMTVAAIDRLVHHAVILEMNTDSY
RRKAAVTRMTDRKASENSKQKPVTKTI
>RPC_2755 single-strand binding protein
MAGSVNKVILIGNLGADPEIKRTQDGRPIANLRIATSETWRDKNSGERKE
KTEWHRVVIFSEGLCRIAEQYLKKGAKVYIEGQLQTRKWTDQSGVEKYST
EVVLQNFNSTLTMLDGRSGGGGGFGGDDAPGGDFGSSGPSSAPPRRAPAA
ASSGGGGGRSSDMDDDIPF
>RPC_1565 hypothetical protein
MSTWLPATDFASLAQISDRKARAALTRSLRKNKPWRGTRLTVRLAPGAGG
PGGVRYEVELSSLPLALQEAWKALQSPVETAASLRDDRNNVGHWRHHIIA
PALVHEKWSAARGEAVRKIVAERHTGPDGKPITITDRTIQRWLDAYEAKG
IAGLMLRARRDKGTQRVVISARWDGAVPFDEEIKETIAEALKTYIRGLHK
EATSAALIDTLAADKLRQLTAARCDYAPAMSVLTFKVPRPLIDAERQFRN
VAIFKKDRKAYEDSRPRIFRTREGLAPMQIIVGDVHHLDICMMRPDGAVA
WPKAIAWLDLATNRIWLDVVLLEKGEGIRNAHVIASFVHMVQSWGMPSVL
YLDNGSEYSWADFMDDALKLMRDVYLTEDRDSQIVRAKPYNASAKAIEGI
FRVLEYTYFRSLQGWAGGDRTNKKTAKVGHPTEPFTGGLDELRAQIGACL
TLYHSKGQGGASGLGNRSPRQVYEAAVAAGWQKVTIDPRELRTVFATSEV
RQVRQGAIQFGGQHWTCPELSTFMASKITVRVPKFEDDPTILPLLDDAGK
LIGFAAPVTRYGILDKAGAAEADRIASEHRRAVRDLDKSVPDIDVAAEIA
RVAAALPTPAEAAVLGTISISDQAREIAVALAETSEDRADRQRAEAQKKR
RIQSARMEKLALALQGNKQ
>RPC_0149 MobA/MobL protein
MRRRSPVRDFFEGGRAYTSFRRTLRRGNDLVAMAIYHLHVKVIGRKSGSS
AVASAAYRSGSRLRDERLDRSQDFSAKRGVVHSEVMLPDNAPAAWSDRER
LWNDVEAFEVRKDAQLAREVEFAIPREMTQAQGIELARDFVQSEFVGFGM
IADLNVHWDIGEDGMPKPHAHVMLTMRQINVNGDENGFGPKVRDWNRTEM
VERWRERWAELANKRLAELDIDARIDHRSFEAQGIGLEPQSQIGASAQRI
EGEGVEAADRAEMHREIARGNGERIIADPSIALDAITHQQSTFTPRDMAK
FAHRHSDGIDQFNAVMGAMRGAPDLVELGQDGRGEDRFTTRDMIEAEQRL
HRAAELMAERERHEVNDADRQAALVRAEARGLVLSGEQADALAHVTDGRD
LGIVVGHAGTGKSTMLGMAREAWEAAGYEVRGVALSGIAAENLEGGSGIA
SRTIASMEHGWGQGRDLLSARDVLVIDEAGMVGTRQLERVLSHAAEAGAK
VVLVGDPQQLQSIEAGAAFRSIHERHGGVEIGEVRRQREDWQRDATRDLA
TGKTGAAIDAYDKNGMAHPAASREQARDDLIDRWDRDRQASPDRSRIILT
HTNDEVRALNEGARERMRAAGDLGEDVRVTVERGARCFATGDRIMFLQNE
RGLGVKNGTLGTVEQVSALSMSARIDDGRSVEFDLKDYNRIDHGYAATIH
KAQGMTVDRTHVLATPGMDAHGSYVALSRHRDSTDLHYGRDDFASQDRLV
RALSRARAKDMASDYERAEPIQGYAERRGITFRERVAEIVQKLVPEKLRG
MFDGLRFPGDVSGHDGGRRPERETPERESATAAVRRTTDAPERTVAADTD
VALRQARTKALIRHARAVNAIFEMQQQGGKASSEQVKELQEARKEFEAVR
PYGSHDAEAAYKTNPDLAEQAASGNPARAIRALQLETELRTDPSRRADRF
VERWQKLDQTSQHQYQAGDMSGYKSTRAAMGDMAKNLERDPQLESILAGR
KQQLGIAFETGRRLGQELAFTHGIDLGRGRGIGL
>RPC_0170 NUDIX hydrolase
MSTTIDVGSAVLSETALYRRNVGIALFDPQGRVLIGHRYRDDGPEIVLPG
LDWQMPQGGIDADEEPRVAVKRELWEETGVSHADFLGETDWLSYDFPPYH
GPKHRLGHFRGQRQKWFALRFTGSDAEIDPLATRNGQPPEFDAWRWERLD
RVADLVVPFRREVYLAVARSFARFTDRV
>RPC_1574 transposase IS116/IS110/IS902
MEQIIRIGMDTSKHFFQLHGVDAAEKPVLRKKLRRKEMLAFFAKLPPTPI
GIEACGAAHYLARELGKLGHVVKLLAPQHVKPYVKRNKNDGRDAEALCEA
MSRPTMEFVPVKTAEQQAALMLMGLRQQLIARRTQLSNAIRGYAAEFGLI
SPRGLDKIEPLLLRIAQDDTVPTLARELFALQGQDYARLQNELKVIDAKL
LAWHRADACSRRLAQIPGVGPIGASALVMKTPVPQTFASARAFAAWLGLT
PKDHSTAGKLRLGTITRAGDELLRSLLVAGATAVIQQVRRGRGRASPWLL
ALLARKPPKLAAVALANKIARIAWKLMLTGENYDGARMLNASPHAA
>RPC_0286 DNA polymerase III, delta subunit
MVALRGREVDSFLARPDSGRPIILLYGPDAGLVRERAEALIASAVDDPSD
PFSTVRLDGDELAAEPSRLVDEAMTIPMFGGRRAIRVRAGSKNFVSGVET
LALSALKDCRIVIEAGDLKPDAALRKACERAKTAVAIGCYTDGERDLAKL
VDDEFRNANLRIAPDVRALLVSLLGGDRQASRNEVRKLVLYTHGQSEVTL
DDVMAVVADASELKLDPVIDGAFAGKPSLVETEFTKAMNAGSNPGTIMMA
AQRHAALMHKAALAVDAGSSESSAVEGGFPRLHFSRKAIVEAGLRNFTAQ
RLLAIIDQLGNAALEMRKQSALAPVIAQRALLAIAVNARRRG
>RPC_3175 Excinuclease ABC, C subunit-like
MAYYVYLLASSKHGTLYLGVTNDLVRRCFEHRSKAATGFTSRYGIDKLVW
FEIYDDIVTAITREKQLKKWRRDWKIRLIEEVNPEWTDLYPGISN
>RPC_2827 DNA topoisomerase IV, B subunit
MAKALKANTKSKAAEDLFGAPQPKLPAAAKAAPRASSAEGDYTAADIEVL
EGLEPVRRRPGMYIGGTDEKALHHLFAEVIDNSMDEALAGHATFIEVTLA
ADGFLTVSDNGRGIPVDPHPKFPKKSALEVIMCTLHSGGKFDSKVYETSG
GLHGVGVSVVNALSCLLEVEVARSQQLYKMTFERGLPMGKLESLGKVHNR
RGTTIRFKPDPQIFGPKAAFKPQRLFKMARSKAYLFGGVEIRWHCDPELL
KGLEGVPAEDTFHFPGGLKDFLGAAIHNDTLVHPDIFSGRSGRVGAHGGC
EWAVAWTADADGFLSSYCNTVPTPDGGTHEAGMRSALLRGLKDHAERAGQ
GKRASSITSEDVMVGAAVMLSVFVREPEFQGQTKDRLATAEAQKIVEQAI
KDPFDHWLSGNPLQANKLLEFVLERADERLRRRQEKEISRKTAVKKLRLP
GKLADCTNTAAEGSELFIVEGDSAGGSAKQGRDRKTQAILPLRGKILNVA
SATRDKLTANAQLSDLMQAIGCGSGANYREDDLRYSRIIIMTDADVDGAH
IASLLITFFYRQMPKLIDEGHLYLAVPPLYRLTHGAKTVYARDDAHKEQL
LKSEFNANAKVDVGRFKGLGEMMPAQLKETTMDPAKRTLLRVALADIDRE
GTADSVERLMGTKAEARFAFISEKAEFASEDLLDV
>RPC_4081 protein of unknown function DUF1568
MPNYRRAFIPGGCWFFTVNLLERRATLLVDHVSILRDAIAHTRKAYPFQI
DAFVVLPDHIHAVWTLPPSDADFSTRWRLIKTRFAKALPKQEQLSAVRQR
RGERGIWQRRFWEHLIRDEADYARHIEYCYINPMKHQLVSRVQDWPYSSF
HRDVQRGLIPPDWAGEATAEGEFGEGA
>RPC_2608 DEAD/DEAH box helicase-like
MRPPLLNPLFAPVTSLPGVGPKQDKLFRYLLDRSETPRLVDLLLHLPVSV
IDRRARPKIRDAVPGSMVTLEVTVDRHRPAPGGRSRAPHLVYASDDTGDV
VLTYFRAQPGYVEKLLPVGEKRYVSGTAQMFDGTLQIVHPDRVVDEAGLA
LLSGIDPVYPLTEGLAVGSLRRAVAQALLKLPTLPEWTAPEVMRRCGFAP
FAEALQRVHRPVELTDILPDGPFWSRLAYDELLAGQLALALVRAQLRRPA
GTRNAGDGGLRAKIIDALPYALTASQQAAAAAIAEDLRQPVRMLRLLQGD
VGSGKTVVALLAAAAVAEVGKQAALMAPTEILARQHFKTVAPLAAQAGLR
VAILTGREKGKERREILAALASGEIHCLVGTHALIQDDVVFNDLALAVVD
EQHRFGVRERLALTNKGAAVDVLVLSATPIPRTLVLSYFGDMDLSELREK
PAGRQPIDTRAVPNSRLNEVMDAVGRALAAGKLVYWICPLVEESETVHLT
DAEQRFESLKFRYGDRVGLVHGKMRGPDKDRVMAQFAAHEIGLLVATTVV
EVGVDVPDATIMVIENAERFGLAQLHQLRGRIGRGSESSTCLLLYKEPLG
EMSAARLRVIRETTDGFRIAEEDLKLRGEGDVLGTRQSGLPGYRIARPEV
HAQLISQARDEALQILKDNPKLKGERGEALRCLLYLFERDEALPLIGAG
>RPC_2610 transcription-repair coupling factor
MKSPTRSPAELLAPGQALTFANVAESAEGLIVSDLARAVAARPKPPAVSL
AVICRDGPRMQQLARSLEFFAPDLAVMQFPAWDCQPYDRVSPHGGVLAQR
LTTLARLSRLKGSDKPLIVLTTVNAIVQRVPAREVIAAQALSVAPGHAVS
MESIVAWLEHNGYNRSSTVREPGEYAVRGGILDLFPAGLDQPVRFDFFGD
TLESIRTFDAETQRTLLDMRALDLVPISEFQLVTDTIRKFRMGYVAEFGA
PLRDDQLYEAVSEGRRYPGMEHWLPLFQERMDTLFDYLDRTPIAIEPQGE
DAARERFKQIGDYYLARREARDIPGGGAIYNPLPPDRLYLAEPEWEKCLQ
GVALARLTPFAVPADDGHVIDAAARAGRNFAPERADAAVNVFEAVVAHVL
ALQGQRKKVVVALWSEGSRDRMASMLRDHKLLNLTSVNSWRTVQATPRNE
AMLAVVGMEAGFETDSVAVISEQDILGDRLVRPRKASRKLDNFISEVTSL
AAGDLVVHVEHGIGRFVGLQTLEVGGAPHDCLELHYAADTKLFLPVENIE
LLSRYGSDHAHVELDRLGGSGWQARKAKLKNRIREMAGELIKIAAERHLR
EAPKLVVQPHLYDEFCARFPYDETEDQLGAIQASLHDLESGKPMDRLVCG
DVGFGKTEVALRATFAVAMEGKQVAVVVPTTLLARQHARNFTERFRGFPV
NVGQASRLVPPKELAKVKKGIAEGAIDIVVGTHALLGKSIKFRDLGLIVV
DEEQHFGVSHKERLKQLRAEVHVLTLSATPIPRTLQLALTGVRDLSIIAS
PPVDRLAVRTFVAPHDPLMIREALLRERYRGGQAFYVCPRIEDLAGVKDF
LDKHVPEMKVAVAHGQMPPTVIEDIMSAFYDGKYDILLSTTIVESGLDIP
NANTLIVHRADMFGLAQLYQLRGRVGRSKLRAYALFTLPSQHQITAQAER
RLKVLQSLETLGAGFQLASHDLDIRGAGNLLGEEQSGHIKEVGFELYQSM
LEEAIVNLKAGVVEPVADRWSPQITIGMPVLIPEEFVADLSVRLSLYRRL
ADLDTDEEIDAFAAELRDRFGLLPDEVRYLFKVAAIKAYCRRANVEKVDA
GPKGVVISFRDNSFAQPDRLVFFIKQHGKAAKVRPDMKVVFLQDWETPEE
RLIGTTEILRQLANLAEDRKAA
>RPC_2239 DNA topoisomerase
MNIVIVESPAKAKTINKYLGSSYEVLASFGHVRDLPAKNGSVDPDANFQM
IWEIDPKAAGRLNDIAKALKGADKLILATDPDREGEAISWHVLEVLKEKR
AIKDHKIERVVFNAITKQAVTDAMKNPRQIDGALVDAYMARRALDYLVGF
TLSPVLWRKLPGARSAGRVQSVALRLVCDRELEIEKFVPREYWSLVATLT
TPRGEMFEARLTGADGKKIQRLDIGTGAEAEDFKQAIEAALFNVASVEAK
PARRNPYAPFTTSTLQQEASRKLGFAPAHTMRIAQRLYEGIDIGGETTGL
ITYMRTDGVQIDSSAITQARQVIGEDYGKQYVPEAPRQYTAKAKNAQEAH
EAIRPTDLSRRPASLRARLDHDQIRLYELIWIRTIASQMESAELERTTVE
IAAKAGSRVLELRATGQVVKFDGFLAVYQEGRDDDGDDEDSRRLPAMSQG
EALARKDLAVTQHFTEPPPRFSEASLVKRMEELGIGRPSTYASILQVLKD
RGYVKLDKKRLHAEDKGRVVVAFLENFFARYVEYDFTAALEENLDRISNN
EISWQQVLRDFWTDFIGAVNDIKDLRVAQVLDALDDMLGSHIYAPRDDGG
DPRQCPSCGTGKLNLKAGKFGAFVGCSNYPECRYTRPLAADGGGDGDRIL
GKDPVSGLEVAVKAGRFGPYIQLGDAKDYAEGEKPKRAGIPKNSSPGDME
LELALKLLSLPREVGKHPETGEPIKAGIGRFGPYVQHEKTYASLEAGDEV
FDIGLNRAVTLIAEKILKGPSKRRFGSDPGKPLGEHPSLGTVAVKSGRYG
AYVTAGGVNATIPSDKTQESITLPEAIALIDERAAKGGGKPKKAAKKAPA
KKAAKSDTDAAAETKKPAKKAAAKKSVAKPKADGVAVSAARAPAKAKSST
KTAAAKKPAKPAAKKSAGKANG
>RPC_0613 HNH endonuclease
MNAHVSHGGWPVLVLNADFRPLSYYPLSLWSWQDAIKAVFLDRVNIVEHY
DQAVHSPSFEIQLPSVVSLKSFVKPSTHPAFTRFNVFLRDRFSCQYCGAP
EDLTFDHIMPRSKGGQTTWENVVAACSPCNLRKGNMTPQQARMFPRQAPF
APTVHQLHRNGRLFPPNYLHDSWLDYLYWDTELDP
>RPC_4366 DNA methylase N-4/N-6
MVVSRRGASARAPRTKFESHPSSQIVIGDCVAEMSKMAAGSVDLVFADPP
YNLQLKGDLKRPDESHVDAVTDDWDKFDSFAAYDNFTRAWLLACRRIMKP
TATLWVIGSYHNIFRVGTIMQDLGFWVLNDIVWRKTNPMPNFRGRRFTNA
HETMIWAARDENSKGYTFNYEALKAANEDVQARSDWLIPLCTGEERLKGA
DGKKIHPTQKPEGLLARVLLSSSKPGDLVLDPFNGTGTTGAVAKRLGRHY
IGFERDHDYAAAARARIDAIEPLPDATLAPFMTARSAPRVAFSELIERGI
ISPGTKLVDSKKRHGALVRADGAIMLGDKVGSIHRMGAVAQGSEACNGWT
FWHVETHKGLRLIDELRAEIRSEMAAS
>RPC_3275 transposase IS116/IS110/IS902
MEQIIRIGMDTSKHFFQLHGVDAAEKPVLRKKLRRKEMLAFFAKLPPTPI
GIEACGAAHYLARELGKLGHVVKLLAPQHVKPYVKRNKNDGRDAEALCEA
MSRPTMEFVPVKTAEQQAALMLMGLRQQLIARRTQLSNAIRGYAAEFGLI
SPRGLDKIEPLLLRIAQDDTVPTLARELFALQGQDYARLQNELKVIDAKL
LAWHRADACSRRLAQIPGVGPIGASALVMKTPVPQTFASARAFAAWLGLT
PKDHSTAGKLRLGTITRAGDELLRSLLVAGATAVIQQVRRGRGRASPWLL
ALLARKPPKLAAVALANKIARIAWKLMLTGENYDGARMLNASPHAA
>RPC_0955 exodeoxyribonuclease V
MPTFTPHQDSALKAVADWLKAKPGRGSTPPVFRLFGYAGTGKTTLARHIA
DGVNGEVKFAAFTGKAALVMRNKGCDNASTIHSLIYRTRESGVEQPSFEL
WDDAPASKAKLIVIDECSMVDEELGRDLMSFDCPLLVLGDPAQLPPIQGG
GFFTDCEPDVMLTEVHRQAQDDPIVRLSMDVREGRDLDIGRYGESEVISR
TELDPQRVMNADQVLVGRNNTRRAYNTRFRLRLNIEDPLPVAGDKLVCLR
NNRKKALFNGGLWRVKARAASKSKIITMRLSPDEDFGGRVTKVSVRGDCF
GGAIEQIPWEQRKPYDEFDYGYVLTVHKSQGSQWDDVVLFDESFAFQESR
ARWLYTGITRAAKRLSIVI
>RPC_2833 DEAD/DEAH box helicase-like
MPNNRGSMSFTHLGLSDKVLAAVAATGYTTPTPIQDQAIPHVLARRDVLG
IAQTGTGKTAAFVLPMLTLLEKGRARARMPRTLILEPTRELAAQVKEQFD
KYGAGQKLNVALLIGGVSFGDQDIKLTRGVDVLIATPGRLLDHTERGGLL
LTGVELLVIDEADRMLDMGFIPDIERICKLVPFTRQTLFFTATMPNEIRR
ITETFLHNPVKIEVSKPASTAVTVTQSQVATGREPHEKRETLRRLLRDAK
DLQNAIIFCNRKREVALLAKSLEKHGFSVGALHGDMEQSARTAALDQFRK
GELPILVASDVAARGLDIPEVSHVINFDVPHHPDDYVHRIGRTGRAGRAG
TAISIVCPSDTKSIAAIEKLIGQDIPKADLGVSDFVEASVEEAPARRSRS
SRKSSESRGREERSSEPRAQEQEERKPRRERSRGGQDRPERSHEPRRNDE
AVKPFVPPVPLPPSQTPSIGRTPAPRPSREPDLEPADHSHLPAFLLRPVR
ARG
>RPC_3293 Exonuclease
MSILAIDFETANEKRSSPCALGLAWIERGQIVRREYRLIKPKEMRFGVFE
AKVHGLSPSEVKDAQEFPEVISEFLSDIQSGLLLAHNAQFDVDVLCATLA
LYGIAIPRFSFLCSQRVASRVWSDEKSLKLSALGEKLGISFRHHQADEDA
FACAHIILAAAAHLGLSEVLDIAPRLGLRLGFVDEVGVVLCEDLPLCDKN
EGVPSFRYAKRLSAFVNEAKTTIPEKSLHFVVKGSSGNQYNVSEIKKDGV
FDLKCECTGWKTRHRCRHVHALLYGEVDSLISDNVDDVKKLQLIIKGLGG
VPPLYADWLPPPQR
>RPC_2584 DNA gyrase, A subunit
MADTDDNKPGEPPAPSDIRPVSILDEMKRSYLDYAMSVIVARALPDARDG
LKPVHRRILYAMYENGFEWNKPYRKSARTVGDVIGKYHPHGDQSVYDAMV
RMAQDFSMRVPLIDGQGNFGSVDGDSAAAMRYTESRLTKIAQLLLDDLDK
DTVDYQDNYDGSFREPRVLPAKFPNLLVNGAGGIAVGMATNIPPHNLGEV
IDACVALIDDPALSIDDLTKIVPGPDFPTGGIILGRAGIRLAYHTGRGSI
VMRGKVAIEPTRKDREAIIISEIPYQVNKATMVERIAELVREKKIEGISD
LRDESDRDGFRVVIELRRDAVPDVVLNQLYRFTPLQTNFGANMVALDAGR
PQLMNLKDLLRLFVAFREQVVTRRTKFLLNKARDRAHVLVGLAIAVANID
EIIRVIRTSPDPATARDTLMARDWEAKDVAAMITLIDDPRHRLNADGTAR
LSFEQAKAILDLRLARLTALGREEISEELDKLAIEIADYLEILRSRARVQ
TIIKEELAAVKAEFATPRKTTIIEQEGEVEDEDLIQREDMVVTVSHAGYV
KRVPLSTYRAQRRGGKGRSGMQTREEDFVSRLFVASTHTPVLFFSSRGQV
YKEKVWRLPIAPPNGRGKALINILPLEQGERITTIMPLPEDESSWAELDV
MFATTRGTVRRNKLSDFVDVRRSGIIAMKLDEGEAIVDVQICTDRDDVLL
TAAGGQCIRFAVTDVRVFQSRASMGVRGMALANGDQVISLTILRHFDANP
AERSTYLKQSGAIRRAATGEEAEAVEGSELAAEVADAEPEEVDAIASLSP
DRYAEMSANEQFVLTLSENGFGKRTSSFEYRTTGRGGKGIVAMAVNARNG
KLVASFPVEEEDQIMLVTDKGQLIRCPVGGIRIVGRSTQGVTVFNTAEDE
HVVSVERIGEDTENGNGNGHDNGQDGG
>RPC_3356 Deoxyribodipyrimidine photolyase
MANAPAPISLVWFRDDLRLSDHPALDDAGRSGAAVVCLYVLDEESAGLRP
LGGAARWWLAQSLRSLSADLAARGGVLILRRGPAARIVAEVAREAGAVRV
SWNDVPNRPARAVADDLAARLGDLGVAAQCCPGDLLAAPATVRTQQGRGL
RVFTPFWKRVLALGDPPQPLTAPKALCSVPSLASDTLDDWKLEPTRPDWA
GGLRARWQPGEAAAQRGLQHFLHGAIAGYATERDRPDRVATSTLSPHLRF
GEISPRQVWHAARFAAAERPAIAADVDKFLSELGWREFCRHLLFDNPDLA
TRNLQPAFDRFPWTTDPIALRAWQRGRTGYPLVDAGMRELRLTGVMHNRV
RMVAASFLVKHLLLDWRCGEAWFWDTLVDADPASNPANWQWVAGCGADAA
PYFRVFNPILQGERFDAEGDYVRRFIPEIAGLSNKSIHQPWTATPLELEA
AGVTLGDTYPNPIVDHRAARQRALAAYATVRNN
>RPC_3867 phage integrase
MAVSNITIRTVQALKPGETIWDADHREAVRGFGVRRQRDQATYVLKYRLF
GRQRFVTIGPHGSPWTPELARKEAKRLLGLVAIGKDPADEKAKARLQAAD
TLRAIADQYLRNAKQRLKPRTYSEIERYLLVSWKPLHPVSVFQITRRHIS
ARIADFESAHGAVSAARARTALSSMFNWAIREGLEIAANPVLGTNRPAQP
GSRERVLTETELSAIWHACGDDDYGRIVRLLLLTAQRRDEVGSMQWAELD
TFSGLWTLPSARTKNHREHSLPFVPAALALLPPRRDGLDFLFGDGPRRSG
DPHRGFSGWSKSKAALDARIAEALGNPLPHWTVHDLRRSASTVMADRLGV
LPHIVEAILNHVSGHRAGVAGVYNRARYATEMREALERWTEHVVALPAQK
>RPC_4373 conserved hypothetical protein
MVLYRRNFLPGGTFFFTVTLADRRSSALVTHIDLLRDAFRKAKHQKPFAI
DAIVILPDHLHAIFTLPADDSDFPGRWKAVKAAFTRGVVATGASIPRDHR
GEYALWQRRYWEHTIRDDRDFERCADYIHINPVKHGLVAAPNAWPYSSLH
RYIRAGILDCDWGGDGKTDIEGFGEPND
>RPC_2757 excinuclease ABC, A subunit
MDEVIKAKRQPAGSQQRSITIRGAREHNLKNVDLEIPRDQLVVFTGLSGS
GKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISI
EQKTTSKNPRSTVGTVTEIYDYMRLLWARAGIPYSPATGLPIESQIVSQM
VDKVLALPEGTRLYLLAPVVRGRKGEYRKELADYLKKGFQRVKIDGAFHE
LAEAPTLDKKFPHDIDVVVDRIVVRPDIGQRLAESFETALKLADGLAVIE
YADAPATSPAATAAAEPEKKKADKKVAKIHDKTGAERIMFSEKFACPVSG
FTIPEIEPRLFSFNNPYGACPACGGLGIEQHIDADLVIPDKELSLRKGAI
APWAKSSSPYYIQTLTALGKFYKFTLDTKWKDLPKKTQNALLHGSGDDEI
KFSYEDGVRSYDTKKPFEGVVTNIQRRFRETESEWAREELGKYFSDVPCA
ACHGFRLKPEALCVKIGGKHIGEVSELSVRRAGEWFETVPKLLNKQQNEI
AVRILKEIRERLSFLLDVGLNYLTLARASGTLSGGESQRIRLASQIGSGL
TGVLYVLDEPSIGLHQRDNARLLDTLRRLRDLGNTVIVVEHDEDAVLAAD
YVVDVGPGAGTHGGHIVAQGTPAEVMKNPKSLTGKYLTGELFVPVPERRP
PNHRRTLKVINARGNNLKNVSAEIPLGLFTCVTGVSGGGKSTLLIDTLYK
AIARKLNNASEGAAPHDRIEGLEHIDKIIDIDQSPIGRTPRSNPATYTGA
FTPIREWFAGLPESKARGYEPGRFSFNVKGGRCEACQGDGVIKIEMHFLP
DVYVTCDVCKGKRYNRETLEVLFKGKSIADVLDMTVEEAAEFFKAVPRVR
ETFKTLKRVGLDYIHVGQQATTLSGGEAQRVKLAKELSKRATGRTLYILD
EPTTGLHFHDVAKLLEVLHELVSQGNSVVVIEHNLEVIKTADWVIDLGPE
GGDGGGEIVAWGPPEDIVKAPRSYTGKFLKPVLEKAAGIAKKKRKTGEAA
E
>RPC_0297 DNA polymerase III, epsilon subunit
MREIVLDTETTGLDPLRGDRLVEIGCVEIFNRMPTGQTFHRYINPERDMP
QEAFAVHGLSAEFLSTKPLFAEVVDEFLEFIAEAPLVIHNASFDIGFINA
ELGKIARPPIPRDRLVDTLLLARRKHPGVSNRLDDLCSRYAIDNSRRTKH
GALLDAELLAEVYIDLIGARQSQLILAEAAPSRSNRPGDAPRRQRETPLA
ARVTDADRIAHREFVATLGDKPIWNEYFGEA
>RPC_0575 DNA repair protein RadC
MAADSADPDDRTEPGFFAEAPHYHGHRERLRERFRSAGAEALSDYELMEL
VLFRALPRRDVKPLAKALIGKFGSFAETVHASEPRLREIAGLGEAAITEI
KLIAAAASRVAKGELKQRAVLSSWSSVIDYCRTAMAFADKEQFRILFLDK
RNQLIADELQQVGTIDHTPVYPREIVKRALELSATAIIMVHNHPSGDPTP
SQSDITMTKQIIDIAKPLGIAVHDHIIVGKHGHASLKGLKLI
>RPC_4850 NUDIX hydrolase
MRPTAAVTFPEIASLDRHGGASLADQRMTTNDSFPLGQPAFVTHVLDRAA
HLRSDDDKLFKLESGRDARAYVVHRDSLVMAKQADGVRALLTIDEALTFG
ANSGTIFLGLRDGAPLFGMGIAADAVERLLIRNDVAVSELRGMAMEGAVP
AGELSAIAMAKSMVSWHQRHGYCANCGARTVMSQGGWKRDCPSCKAEHFP
RTDPVVIMLVTFGDKCLLGRQKQFPHGMYSCLAGFVEAAETFEDAVRREV
FEESGIRCGDVAYYMTQPWPYPSSLMIGCSAQATTEDIVVDHTELEDARW
FSRDEAMLMHHRRHPDGLTGAHSFAIAHHLLGRWLHGPSSAT
>RPC_3543 SMC protein-like
MYISEIRIENFRLFGVGNDTFVLRLKPGLTALVGENDGGKTAVIDALRLV
LGTRDQELIRVEATDFHQAPGGAQAEQICIRLTFKALTVHDRAAFAEYLT
YLPGGDVTETALIITWNARRNTKEGVSRRTLPSEIRTGAAGDGPVLEGAA
RALLTATYLRPLRDAERAMSAGRGSRLSQILQHTKEIKETGVAFDPKASP
PADPAKLSVLGVGDYASFLFDGSAGIKEARKKLNDEFLKPLSFANDLLNA
RIAVSGSRDDAVRLRQLLEKLELALSASDDTDASYTRGLGSNNLLFMACE
LLLLAAESDGFPLLLIEEPEAHLHPQRQLRLMSFLQEQADGVRADGQQIQ
ILVTTHSPNLASDIRLENLVMIEGRKAFPMGPEHTQLSASDYRFLERFLD
VTKANLFFARAVMIVEGDSETILLPVIARLLDRDFHRYGVSLVNVGGVGL
GRFARIFMRKRPEESGVISVPVACVTDLDVMPDDAPWIVGKLKDGEDVPE
IKKGGRQWRRKADFPGAKLDERRKERRDKASGQKVKTFVAGDWTLEFDLA
LHGMRPQVWLAAHMAFADDELVNGKTTKKAVIEESVPAFKELIRGGLSSE
TFASHVYALFEGDKASKAIAAQYLAGILEGLVESKKWNSADLLKKLPSYI
VQAIEHVTEPFSTAKKPAETGPKDEGPSETEAGGSGDEPEEDASV
>RPC_0970 DNA primase
MRFTPQFLDELRARLPVSEVVGRRVKLKKAGREWKGLSPFQQEKSPSFTV
NDQKGFYHDFSSGKHGDIISFVMETDGCGFTEAVERLAQMAGVPLPAVTP
DAARQEQRRKSLYDVMDLAAKFFADTLAARQGARARGYLADRAMSPATQL
KFRIGYAPGERFALKEHLGKLGIPVEDMVEAGLLISGEDIPVPFDRFRDR
VMFPIADVRGRVIAFGGRALEKDVPAKYLNSPETPLFHKGDNLYNLAVAR
AAAHDGAPLIVVEGYVDVIAMVGAGYAATVAPLGTALTENQLQLLWKMAD
EPILCFDGDKAGQKAAWRAADMALPHLAPGKSLRFALLPEGQDPDDLARS
GGRAAIDEVIGSARGLADVLWTREIQSGSFATPERRAALEARINELTNGI
RDEVLRRYYRQDMAERLRSAFAPQGGFGGRGGYGRGGPRGGGGGGFGGES
GRGFPQRSAFTPGAAGRMQPRGGRGAVSAGSQTINRMPYQVASPDLASSP
IMRGQRSAISRREALILLTLLNHPWLLHDRLEEVAALELAHPEAHRLRAG
IIAAFANDYHHTGSPGEPSAKLRADLAAAGLSEQLQRVERAITTNDVWAA
GPDAAPEDVLSTWHQLVALHRQWHSLLRELKDAELALGDQQSEANFGWLR
DVKARLAEVDGTEALIEGFGESSGRFQRSV
>RPC_3062 phage integrase
MLTDMAIKRLKPKDKLYKVADRDGMYVSVATTGQITFRYDYRLNGRRETL
TIGPYGPDGFTLAEARERCIAARKQVAEGLSPAHEKQRDKRRKAMERSFG
AVSGIWIKEARMAESTRSMRKAILDRDILPAWKNRLLTEVTPDDLRQLCA
KVKERGAPATAIHARDIVKQIFAFAILHGEKVPNPADEVGPASIATFQPK
DRALSPAEIKIMLQQIEHVPTLPTIRLGLRLILLTMVRKSELQDATWDEV
DFENAVWTIPKERMKRSKAHNVYLSQQSLDILIALKTCAGNSRYLLPSRY
DADAPMSRATFNRVTTAVVARAKKEGLPLEPFTVHDLRRTGSTLLNEMGF
NSDWIEKCLAHEDGRSSRGVYNKAEYEPQRRHMFQEWADMIDAWVNGQKR
APTLLPPAMAFMGGKGEC
>RPC_3416 AAA ATPase, central region
MSPKRPQPSDNLFAAAGMERDAPHPLPDRLRPRALEDVVGQDHILGPDGA
LTRMLETRTLGSLVFWGPPGTGKTTVARLLADTTELHFEQISAVFSGVAD
LKKVFDAARARRQTGRGTLLFVDEVHRFNKAQQDSFLPVMEDGTVVLVGA
TTENPSFELNAALLSRARVLVFHSLDAQAIEKLYAHAETVEAKKLPLDAE
ARAVLVRMADGDGRAALTLAEEVWRAARADEVFNAEQLQEILQRRAPIYD
KSADGHYNLISALHKSVRGSDPDAALYYLCRMLDAGEDPLFLARRVVRMA
VEDIGLADPQALVICNAAKDAYDFLGSPEGELAIAQAVIYLATAPKSNAA
YKAYKAAMRAAKQGGSLLPPKHILNAPTKLMKSEDYGAGYQYDHDTPEGF
SGQEYFPDALGHQTFYDPPDRGFEREIRKRLDYWAKLRNSKT
>RPC_4622 transposase IS116/IS110/IS902
MEQIIRIGMDTSKHFFQLHGVDAAEKPVLRKKLRRKEMLAFFAKLPPTPI
GIEACGAAHYLARELGKLGHVVKLLAPQHVKPYVKRNKNDGRDAEALCEA
MSRPTMEFVPVKTAEQQAALMLMGLRQQLIARRTQLSNAIRGYAAEFGLI
SPRGLDKIEPLLLRIAQDDTVPTLARELFALQGQDYARLQNELKVIDAKL
LAWHRADACSRRLAQIPGVGPIGASALVMKTPVPQTFASARAFAAWLGLT
PKDHSTAGKLRLGTITRAGDELLRSLLVAGATAVIQQVRRGRGRASPWLL
ALLARKPPKLAAVALANKIARIAWKLMLTGENYDGARMLNASPHAA
>RPC_4058 transposase and inactivated derivative
MPSAVPLRTDFSAGELRQLAKRSKDNNQSRRLLSLAAVLDGMNRTDAARI
GGMDRQTLRDWVHRFNEAGPDGLLDNWASGPASRLSPDQQAELAAIVEAG
PDWELDGVVRWRRVDLKRVIAERFGVDYHERHVGTLLKKLGFSHVSARPR
HPGQDVEIMEAFKKTSRAH
>RPC_3936 helicase-like
MTGRPDTASVLAGLKDFQRTTVDYVFERFYGQQPTRRFLVADEVGLGKTL
VARGVIARTIDHLWSTVPRIDIIYICSNVDIARQNVQRLAIPGCEVAAQS
TRLTLLPLHMHDLRRHRVNFVALTPATSFEQTGGGGRIDERVLLYWLLDR
AWGIHGSRASLYVMQDYASTASFERAVDAFDPAMVNEQIAAEFVSRLAEQ
VQEEKAAKTPDMRQRFEVLCRIFCRSDARPEPGATKLRTQWIGELRWMLA
RVCLATLEPDLIILDEFQRFKHLLEEESEAGELARDLFDSQSEHGARALL
LSATPYRGLSLHHEIDDDHYGDFLTLLRFLENGDAAGCKQVLADYRDALP
AIMTPEGLAQLRSAKEALEQRLRRVMARTERLATAGQRGGMLLDSPPADG
SLHTVDVRAFLGAQRIADSIGQGDLVEYWKSSPYLFNFMDSYALKDAFKK
AADTSEIVKFVREFPDTFLDLEKARTYQPLEPANPRLRGLLAETVDRGMW
RLLWIPPSLNYYALAGPFAAPELAKLTKRLVFSAWHMVPRAVASLVSYEA
ERRMMRAPHPRARLTQEDWKKQRGLLRFGTSADRLTGMPLLLLVYPCLTF
ARHCDPRDLARGRSLTASEARLELAARLREMVEGLGIAYETGGNADERWY
WLAPMLLDFAEFPAAAQAWWERTELAQIWAGAEAGEEDAGWSRHVDEARE
TLNTIRDGKQRLGSPPEDLIDVLSLAASAAPATAALRAYVRTGEKDTAQS
LSLRDTAARSGRAFLSLFNHAEVTETIRAEFRGEPYWLRVLEYAHNGGLQ
AVLDEYTHLLRESLGCADAPVSAMAEKVAAELIGALTLRTASLRVDEISA
PPYAREAKIKSEPMHIRFAMRFGDERYDEEAEPGGLLATAGTRKERVRAA
FNSPFWPFVLVSTSVGQEGLDFHHYCHAITHWNLPSNPVDLEQREGRVHR
YKGHAVRKNVAAAFATEALDRPASDVWETVFAIGRANRPSQENDLVPYWL
FPGDAKIERHVPALPFSREAERIHGLRRSLAIYRMVFGQSRQEDLIAYLL
AHIPEQDRAGIMAELQIDLSPQSRTQANE
>RPC_2290 replicative DNA helicase
MAATDSNVLKLAPEPGTPAYRMAPHNIEAEQSVLGAILINNDAFYRVSDF
LKLEHFFEPIHQTIYDTAASLIRAGKVATPVTLKTFLPADTDLGGITVGQ
YLARLAAEATTIINAHDYGRTIYELALRRDLIGIGTDMVNVAYDAPVDFA
PKAQIEDAERRLYELAESGRYDGGFQKFSQALTTAVDMAAAAFQRDGRLS
GIATGLRDLDNKMGGLQHSDLIIVAGRPGMGKTALATNIAYNVARAYRGE
IQADGTNKTVNGGIVGFFSCEMSAEQLATRILAEQTGISSSMIRRGGISE
ADFDKIRDYSIELQSLPLFVDETGGLSISQLTARARRLKRQKGLDLIIVD
YIQLLQGSGKRSDNRVQEVTEITTSLKALAKELNVPVIGLSQLSRQVESR
DDKRPQLSDLRESGSIEQDADVVMFVYREEYYLQNKEPRPGTPEHEKWTT
DMDLVHGKAEVIIGKQRHGPTGTVDLQFEGQFTRFSDLVQDSHLPDRM
>RPC_0965 transposase IS116/IS110/IS902
MEQIIRIGMDTSKHFFQLHGVDAAEKPVLRKKLRRKEMLAFFAKLPPTPI
GIEACGAAHYLARELGKLGHVVKLLAPQHVKPYVKRNKNDGRDAEALCEA
MSRPTMEFVPVKTAEQQAALMLMGLRQQLIARRTQLSNAIRGYAAEFGLI
SPRGLDKIEPLLLRIAQDDTVPTLARELFALQGQDYARLQNELKVIDAKL
LAWHRADACSRRLAQIPGVGPIGASALVMKTPVPQTFASARAFAAWLGLT
PKDHSTAGKLRLGTITRAGDELLRSLLVAGATAVIQQVRRGRGRASPWLL
ALLARKPPKLAAVALANKIARIAWKLMLTGENYDGARMLNASPHAA
>RPC_0179 primosomal protein N'
MDHSTRSSSSSATRVVDVLLPVALDQAYSYRVPRGVELAPGDVVCVPLGA
REVIGVVWADNPNPDPRLHNRLKDVDSKLDVPRFREELRRLVDWVANYTL
SPRGQVLRMTLRMGEHLGPERVRLGVRLVGPKPQRMTPARARLIEILSDG
LLHGKSDAIKEAGCSPGVVDGLVDEGTLKVEPMARALAPPAPDPDFAQPD
FSPEQTTAADSLRALAAGGAFKVALLDGVTGSGKTEVYFEAVAEIIRRGE
QTLILMPEIALTGQFLDRFAQRFGVRPLEWHSELTPRTRARNWAAIAAGE
AQVVVGARSALFLPYAKLGLIIVDEEHDQAYKQDEGAHYHARDMAVVRAS
IAKIPIILASATPSVESEVNARKGRYQRVALPSRFGGQHMPQIEAIDLRR
EGPMRGRYIAPRLAEQIGIAIERREQALLFLNRRGYAPLTLCRACGHRFA
CTICDAWLVDHRFRQRLVCHHCGFSMPRPKLCPHCNAEESLVAVGPGVER
LQEEAQKLFPDARTMVLSSDLVTSIESMRSELTEIAEGRVDIIIGTQLVA
KGHNFPRLNLVGVIDADLGLGNGDPRAAERTYQLLNQVIGRAGRDQGYGI
GYLQTHQPEHPVMKALVACDREAFYESEIDARERTGYPPFGRLASLIVSA
GDRPTAEGFARKLVAMSPLDERIKVLGPAEAPLAVIKGRYRFRILVKSAR
GVDLSSYLRQWLALGPKTTGNLNLEVDVDPQSFL
>RPC_4229 conserved hypothetical protein
MQPDPNTGYLPAACEFEFTTDSGETVRAGTLNALNSRLAVFNEDFIDLNL
QWSAGKARPVFYIGKEQAEAAANLKRTEAAIPAATERKAGAEKLVRAGEQ
QVATFKREVARKISQEIRPANRKYEAPQLTSDYAALDLDAGATLNDTQLA
AQRELCRRDEAMPELANVDFDTAPANVALQTAIRLLQETPSLTIIPELET
HSEMLRWVQEGVDYHENHGLNECLLCGGILSSERKDLLASALDEGFEKFQ
EALDLAKEKLEAERERYQKIALSISSSRDVVADRREEYDQAAGRVKEELA
DSIAKVLEPAIAAIDAKLARPTLKPDAKAMTWGDSRLTDEAFARIESWGG
VLNLNIARHNEACASFSQRQEDARLALRRHHLAENHQEYASVGEAVASAE
NELKAATSELQALQAEARDLSVRVKEHGQAAAKINRLIEAYLGHKELSIV
SVDKGYEIHRRGRPIEGSPSEGEKTAIAICYFLSTLEADGKSIKDSIVVV
DDPISSLDSKALNYACSLLLSRLADASQVFVLTHNQNCMNEFKKAWSRFH
RPRKENATPTASLLFLDVKIPHGGETRTTTIVEMSRLLREYDSEYHYLVD
HVLKFHASNDSEYEYAYMIPNVLRRVLDVFLAFRCPGSAGFAGKMEQLGK
DYEALDGERVAALQRLVQLESHSDSVDDLIGFSSMTLEESKSAAAALVGL
MEIVDPNHLAALRRLCRPGKGG
>RPC_3279 UvrD/REP helicase
MTDPTNKRLANDLPGYQPAAGGIAARARAQAMPAYLAGLNPEQSDAVQTL
DGPVLVLAGAGTGKTRVLTSRIAHILSSGRARPGEILSVTFTNKAAREMK
LRLGQMLGQAVEGMPWLGTFHSIGGRILRYHAELVQLTSNFTVLDTDDQI
RLLKQLLAADNIDDKRWPARMLAGLIDGWKNRGLTPSQVPAGEAAVFGNG
RGGKLYAAYQERLKVLNAADFGDLLLEDIRLFREHPDVLRQYQQRFKYIL
VDEYQDTNVAQYLWLRLLAQAPSSPKNSSILRDAALRAAPQHDGAETIAS
AGTDLVPHPEERGQGPRVSKGEAEPPAASSPPKNICCVGDDDQSIYGWRG
AEVDNILRFDHDFPGAKIIRLERNYRSTGHILAAASHLIAHNEGRLGKTL
RTEDVDGEKVTVTGSWDSEEEARAIGEEIEQLQRDGHKLNDIAILVRASF
QMREFEDRFVTLGLPYRVIGGPRFYERAEIRDALAYLRVINSPADDLAFE
RIVNVPKRGLGDATVQLLHDHARKRKIPLTEAARAIVDSDELKPKARGSL
RELMTSFERWRMQREVKTHTELAEIVLDESGYTEMWQKDRSADAAGRLEN
LKELVRSMEEFENLQGFLEHISLVMDREGGADDDAVSVMTLHSAKGLEFD
SVFLPGWEEGLFPHQRALDEQGRAGLEEERRLAHVGITRARKRAKLYFAS
NRRIHGTWNTTLPSRFLDELPADHVEITESKGGSGWGGAGGYGSSRFDNM
ESFGSSYTTPGWQRAQANRAKNSRGGGSNGFSEEQSPFSSSRGESDHFAK
KRAPLTIEGELVAKSTGAASDYALKDRVFHQKFGYGQVVRVDGNKLTIAF
DKAGEKKVVDSFVERV
>RPC_4621 exodeoxyribonuclease VII, large subunit
MPPTTAALPNSPEFTVTELSSALKRTVEDAYGHVRVRGEISGFRGPHSSG
HCYFALKDEGAKIEAVIWKGVHGRMRFKPQEGLEVIATGKLTTYPGSSKY
QIVIEAIEPAGIGALMALMEERKRKLGAEGLFDEARKQLLPYLPEVIGVV
TSPTGAVIRDILHRLQDRFPRRVLVWPVKVQGDGSAEQIAAAIHGFNALP
EGGSIPRPDLLIVARGGGSLEDLWSFNEEIVVRAAADSMIPLISAVGHET
DITLIDFAADKRAPTPTAAAEMAVPVRAELFVEVGQLGHRAMLCFQRGQE
RRRSELRAATRALPSAAALLAIPRQRLDGAAAALPRALRANSHAHHRRFA
TACAGLTLKVLRAQVAHATQRLAVNGERLKHCARAGLRHRRDRFAALDAR
FKASKLANVQAQRKALARDRERTQRLAERARRALLIALQRQQARVASCGQ
LLGALSYRGVLARGFALVRDAQGLAVHAAAAIDPGARLSLEFADGRIGAT
ADGESAAAPRSKPAAKPATAKPASTTTAKRVSKSVDQGSLF
>RPC_3057 IstB-like ATP-binding protein
MERTQLFDLMGELKLYGMKAAYDEIMTTAIKRQHEPQRIVGDLLSAEINE
KQARSIKYQLTIAKLPLAKDIDGFLFDGTPINQTLVNDLAGGGFIAQQRN
IVLIGGTGTGKTHLAIAIARSCIRSGARGRFYNVVDLVNRLEAETRNGRQ
GQIAEHLTRMDLIVLDELGYLPFAQSGGQLLFHLVSRLYERTSIIVTTNL
AFGEWPSVFGDAKMTTALLDRLTHHCDIVETGNDSWRFKNRDDDQIARAR
LVSATPTSSDEASATAQTRRPRGSKLDADAGSNLNAD
>RPC_3180 Excinuclease ABC, C subunit-like
MAYYVYLLASSKHGTLYLGVTNDLVRRCYEHRTKAAPGFTSRYGVDKLVW
FEIYDNIVTAITREKQLKKWRRDWKIRLIEEVNPEWSDLYPGISH
>RPC_3124 transposase IS116/IS110/IS902
MEQIIRIGMDTSKHFFQLHGVDAAEKPVLRKKLRRKEMLAFFAKLPPTPI
GIEACGAAHYLARELGKLGHVVKLLAPQHVKPYVKRNKNDGRDAEALCEA
MSRPTMEFVPVKTAEQQAALMLMGLRQQLIARRTQLSNAIRGYAAEFGLI
SPRGLDKIEPLLLRIAQDDTVPTLARELFALQGQDYARLQNELKVIDAKL
LAWHRADACSRRLAQIPGVGPIGASALVMKTPVPQTFASARAFAAWLGLT
PKDHSTAGKLRLGTITRAGDELLRSLLVAGATAVIQQVRRGRGRASPWLL
ALLARKPPKLAAVALANKIARIAWKLMLTGENYDGARMLNASPHAA
>RPC_4308 hypothetical protein
MKISRLTVDKLGVKLYDRASAVIAELVSNSYDADATEVRISAPMGQYLAS
KAGGQIIDKGFEIIVQDNGLGMDPRGMQEFFLVVGSDRRLDAKRGDTSKL
YGRKVMGRKGVGKLAPFGICKTLEVISSGGEKVVRRQAGGNTETGYLTSH
ILLDYDDIVGDDDGDYQPTVGSLDNSVQPSRGTTIKLSRFSYRRVPEIEH
LSRQVAQRFGIRSDKWKVLLRDSTMTDGANGSEVSVGEFDINVMEGTRIE
FMGPDGPTVSTVSADGYQARTPIGDLITSFNAGFSHDGRFYPVKGWVAYA
RESYRDDLMAGVRIYCRHKIAAQTALFNRGAGFHGEHSVRSYFIGELSCD
WLDEYEDLIQTDRRDILWSHDLGQAFQEWGQSLVLEVGKRARDPMRKKTR
EVFREVGRVEERVNAAFPRPEQRDLREKATEIAEMLGKSLREDEVGDFDI
VGPLVTLSIDLAPHISLERKLREAAEAENTPAAVIGSILRTAHLAELHSF
GRIAYDRVRVIERLKSLKDDPKTVEEELQELIENAPWLINPEWAPITANQ
ALRTLKIEFEEYYRLRTGQSITLRDFAETQKRPDFVAFAVGQQLEVVEIK
RPFHKLMNDEMERINRYYTEMRDFLDDPGHAAFKKEFQDFRITLVCDGLS
LSGMAKTAFEGITKEGRLEHVKWRDFLLRTEMSHKQFLEEAERQKRDAAQ
RD
>RPC_2010 transposase IS116/IS110/IS902
MEQIIRIGMDTSKHFFQLHGVDAAEKPVLRKKLRRKEMLAFFAKLPPTPI
GIEACGAAHYLARELGKLGHVVKLLAPQHVKPYVKRNKNDGRDAEALCEA
MSRPTMEFVPVKTAEQQAALMLMGLRQQLIARRTQLSNAIRGYAAEFGLI
SPRGLDKIEPLLLRIAQDDTVPTLARELFALQGQDYARLQNELKVIDAKL
LAWHRADACSRRLAQIPGVGPIGASALVMKTPVPQTFASARAFAAWLGLT
PKDHSTAGKLRLGTITRAGDELLRSLLVAGATAVIQQVRRGRGRASPWLL
ALLARKPPKLAAVALANKIARIAWKLMLTGENYDGARMLNASPHAA
>RPC_4309 DNA-cytosine methyltransferase
MMRRKETNAGLPGAQLVAIDLFSGGGALTLGLKTAGFRVVSAVEVEQHAF
ATYKANHPEVFAYKQDVRTVDGQSLSMHAPRRKIDLLAGCPPCQGFTSLT
SKWRRQDPRNNLVREMSRLVQEIRPRAVMMENVPRLASTGRDLLDGFIVD
LKKAGYRVAWDVLQVADYGTPQARKRLVLLAGRGFDIDLPPATHSSTSGF
DLPPWKTVRDTIGGLPPPSDFVDVRHTMGNRVADWHVVRKLSPENQKRIK
RAKPGASWQSIPEALRPNCHRGGYVGFGNVYGRMSWDEVSPTITAGCATF
SKGRFGHPEAHRTISIREAALLQEIPDYYLIDTPHIDQACSIIGNALPCG
FAAVMARHAAQTIQSHFLPRRQSN
>RPC_0772 phage integrase
MELRRLTASFLDTCAVERQLSANTLQAYGYDLADFCAWLKGQGEAPAVTT
EHLRDYLESMMVARKLSPSTVRRRIACLRAFFRFLDDRGEMPDPFTGWRL
KLPRRKRLPRALSREEANQLLTSARAPGAARQSLPASTPLCVEIRLMIST
GIRVGELCKIATGDVSSDGASLRIHGKGSRDRVVYVSNPALRNELRKLTT
LRQRLSAGDGPLFVNRNGENLRPYSFRTKLRNFAGQAGLRRRVTPHMLRH
TAATLLIESGVDIRIVQRLLGHSSIATTEIYTHVSDEALRKSLERANVLG
MLAA
>RPC_0387 UvrD/REP helicase
MSSLRVIPPAATERQVQASDPTASVFVSANAGSGKTHVLVQRVIRLLLAG
VPPEKILCITFTKAAAANMAQRVFTTLGHWVTLSDDSLDAAIRAAGIAQP
DSKLRMRARELFACALETPGGLKVQTIHALCTRLLQQFPFEANVPARFAV
LDERDQTEMMERASLSVLLQAAQAPNSAAGKALTVAMTSAADVTFRDVVR
DACFSRDKFMAWIARAGSTEAAMAQLSAALGVAPDDSCAAVDQEIVDGPN
LPRARWEKAASILEGGSKTDGDQAERLRQAATLTGNDQIARYLQIFLTKD
FTPRKTLATKKITDARPDLVAAMKRECERIGPLLERRRALALRERTQALL
VIASDVAADYARQKQDRGLLDYDDLIDKTLDMLNRISSGWVHYKLDRGVD
HVLIDEAQDTSPRQWDIVDHLIAEFTAGVGARDVKRTIFAVGDEKQSIFS
FQGASPREFALRRSALQTRFRNAELKFDPISFNYSFRSGAAILQSVDHVF
RDQAIYRSIHADTTYPIHESLADAGPSLIDLWELQQPDERQDLEGWRAPF
DALPETSPEVKLSQRVQAEIAELIGNGTLTGPKGDRRALRYGDVLILVRR
RGKAFDAIIQALKRGGIPVAGADRLKLTEHIAIIDLMNLADALLLPQDDL
ALAVALKSPLFGLDDDDLFKLAWQRKGSLRDALAAHAAEDGKFNTAHRRL
QDCEKRARADTPFAFYAWLLGGDGGRARILRRLGHEATDALDEFLELALG
YERKAPASLQGFMAWLRAADTEVKRDMEISRDEVRVMTVHGAKGLEAPVV
FLVDTTSSPADTQRLNLVHLPQGNAALSGPSVAVWAGKKADDPPVVANAR
AAMIAETEDEYRRLLYVAMTRAADRLIVGGCQPGNRAEVRPLSWYDLICK
GLEGSGLAMQTVPPPDGVVKRYCRQEDLVPEQDQAAAPPRVAAPAPQPLP
AWLNQPAAPTPLAERVLRPSDDADSRRSRAEDSSAPRAQARQRGQLVHRL
LQSLPELPRERRAAAAARYLARNAKDPVWTEPDRAALAVSVLALIDDPRL
AALFGPGSRAEVPIAGRLTRLGGDTVLVSGQIDRLLVTPSEVLLVDFKTN
QAPPRALAEIPSGYLRQLALYRAVLANLYPGRTLRAALIWSEVAEIMEIS
DNALDAGLAAIMSA
>RPC_0530 Tyrosine recombinase XerD
MPPGKNSDARLIELFLDMIAAEQGAGKNTLDAYRGDLTDLSDFLGHARSS
FVAADTEVLRGYLAELDERGYKSTSVARKLSAFRHLFRFLLTERIRADDP
AAILSGPKRGRGLPKVLSIADVDRLLQHAKDLIAAPHANTQQRLRAARLY
CLLEVLYATGLRVSELVSLPLSAARRDARMIVVRGKGNKERLVPLNESSK
QAMAGYLAALDELRQEKAKNASASKWLFPSFGESGHLTRQHFARELKDLA
GAAGLSPRLVSPHVLRHAFASHLLHNGADLRIVQTLLGHTDISTTQIYTH
VVEERLKSLVRDLHPLADKP
>RPC_2988 conserved hypothetical protein
MRQLLSYLIIALALVAATAARAENETDRLREALRSVTAQLRSLEDARAVQ
QAKLTAAEQERDRLRKQNEAFRAQVKEAEQAYRQAVRDFNDRLAERDDAL
EKWKSAYGEAATVARTKDAERAKFEGTATALRASNKACEAKNAQLLRVGN
EIVTQYEAMNPMEQIWDHEPVLGLKRVDHQNAAQDFRDKILDQKATP
>RPC_0005 DNA gyrase, B subunit
MTEPARQPIAEPEASAPVEYGAESIRVLKGLDAVRKRPGMYIGDTDDGSG
LHHMVYEVVDNAIDEALAGHATAVEVVLNADGSVTVRDDGRGIPVGIHKG
EGISAAEVIMTQLHAGGKFDQNSYKVSGGLHGVGVSVVNALSSKLQLRVW
RDGKEHFIEFAHGDAVAPLVVVGDSNGKRGTEVTFLASPETFTHIEYDFA
TLEHRLRELAFLNSGVTIVLSDLRHPVEKREEMMYRGGVEEFVKYLDRNK
KAMVPAPIMIAAELNGIGVEAALWWNDSYHENVLCFTNNIPQRDGGTHLA
GFRGALTRQVNGYADVIAKKEKIALTGDDCREGLTAVLSVKVPDPKFSSQ
TKDKLVSSEVRPVVENVLNEALAAWFEEHPAEAKIIVGKVIEAGAAREAA
RKARELTRRKGALDIASLPGKLADCQERDPAKSELFIVEGDSAGGSAKQG
RNREFQAVLPLRGKILNVERARFDKMLGSEQIGTLITALGTGIGRDDFDI
SKLRYHKIILMTDADVDGAHIRTLLLTFFFRQMPSLIEGGFLYIAQPPLY
KVTRGKSEQYLKDERALEDYLIETGLDDCVFKLASGEDRSSRDLLALVED
ARQIRGTLHNLHSRYNRSVVEQAAIAGVLNPRVTADLATANEAAAYIARR
LDALADEVERGWVGRFVEGEGFSFERTVRGVKDVAMIDAALLSSADARKL
DEYAVNLQEAYPRPGILRRKDTETPIHGPVSLFEAVTDAGRKGVALQRYK
GLGEMNPEQLWHTTLDTNARSLLQVKVREVDEADDIFTKLMGDVVEPRRE
FIQDNSLSANVDV
>RPC_4886 HhH-GPD
MTVHLNTQTDLDEAVKALVKLDPRLKPVLKRAGMPTLRRREPGFGGLAAI
VCGQQLSVASAAAIWRRVSAAFDPFHHDALRRARADRLGRLGLSAAKIKT
LKNLARELAAERLNLDVLADEDADAAHASLTALHGIGPWTADIYLLFCLG
HGDAWPAGDLALQEAMRIGLELPARPTPKQMAPLAEPWRPLRGAAAHLWW
AYYHAVKQREGVIGKAAAKI
>RPC_4806 crossover junction endodeoxyribonuclease RuvC
MSAPPIRQPIRILGIDPGLRRTGWGVIESCGNRLVFIGCGSVEPDNDLPL
ASRLLEIHHGLAKVLAEFVPAEAAVEQTFVNKDAGATLKLGQARGIAMLA
PALVGIAVAEYAPNLIKKTVIGAGHADKAQIQMMLKILLPKAEPKTADAA
DALAIAITHAHHRGGALLRLKAVQA
>RPC_1383 NUDIX hydrolase
MKAADVLASWPAGRKRHGSGPREDSVVSNMQKLRRALEPALRRVFHLYWR
LARGMTLGVRGLVLDDAGRVFLIRHTYVSGWHLPGGGVEVGETFREALCR
EVMEEGRIEIVGEPDLHGVFLNSHVSPRDHVAVYVIRQFRQDRVPAPNRE
IAESGFFAVDALPAGTTLGTRLRIAEVLDGARPPLTWRPAAEP
>RPC_1733 DNA polymerase III, alpha subunit
MTPVYAEIGITTNFSFLRGGSHPQDYVQQASELRLPVIGIADHNTLAGVV
RAYSELRNERLAHKPRLLIGARLVFIDGTPDILVYPRDRAAYGRLCQLLT
RGKRAADKGECHLGLDDLAEFAEGQLLVLALPHRFEDAEAGRLLARLQGF
AADGVWLAASLLYRGDDRRRLQRLQQLAAQARLPLLATNEVLYHHPARRP
LQDVLSCVREKLTLESIGTRLEANAERHLKPAQEMARLFRDCPQAIAETM
RFAARIQFSLDQLQYQYPNEPVPAGKTAQRHLEDLTWAGAHKYFPRGISP
HLKKTLRKELRLIRKLRYAHYFLTVHDIVCYARSQNILCQGRGSAANSAV
CYVLGITAVNPIEIDLLFERFISKERLEPPDIDVDFEHSRREEVMQYIYR
RYGRDRAAIIATVIHYRPRSAIRDVGKVLGLTEDVTSALADTVWGSWGRG
LNEMQVTQAGLDPRNPLIARAIDLASELIGFPRHLSQHVGGYVLTEDRLD
SYVPIGNAAMDDRTFVEWDKNDVDTLKMMKVDVLALGMLTCIRKCFDLID
AHKGERWALATVPREVPAVYDMLCRSESLGVFQVESRAQMNMLPRLKPRQ
FYDLVIEVAIVRPGPIQGDMVHPYLRRRNAEEPVYYPSPSPQHGDKDELR
KVLHKTLGVPLFQEQAMRIAIEAAKFSPEEANGLRRAMATFRNVGTIGKF
ESKMVNNMISRGYDPVFAKNCFDQIKGFGSYGFPESHAASFAQLVYVSSW
LKHFHPDAFCCGLLNSQPMGFYAPAQIVRDARTNGVEVRAVDVSFSFGQN
TLEERCGRYHALRLGFRQIDGFRCTDSDAAHLRLQVGRPEVEDWAARIVE
TRRRQRFVSLEQFARATALPKRALLLLAEADAFRSIGLDRRAALWAVRRL
PDDVALPLFEISAAREQPDEAARPLPQMPLAEHVVADYQTIRLSLKGHPM
EFLRAMFDRERVVTCAAVSALRRNGPRSRCAGVVLVRQRPGSANGVVFMT
LEDETGIANVVVWPQVLEQFRKEVMGARLLLVEGKIQASPEGVVHLVAER
LIDRSYEMARLSDNLRTRPALPAGAALIEPLNDDRRDHADNPAQKIRHPR
DVRILPPSRDFR
>RPC_1001 IstB-like ATP-binding protein
MLTRDNTPAPITVDLARLPMLLTSLRLPTIGQMWADLAERSDREGWPAAR
YLAALLEHELAERYQRRIQRNMQDAHLPAGKSFATFDFAAVPMINKSQIT
ALAAGGSWLDKGANLLAFGPPGVGKSHLGAALGQALIENGYRVLFTRTTD
MVQRLQAARRDLTLQNVMEKLDKYDLLILDDLSYVRKDQAETSVLFELIS
ARYERRSLLITANQPFGGWEEIFPDKAMTVAAIDRLVHHAVILEMNTDSY
RRKAAVTRMTDRKASENSKQKPVTKTI
>RPC_3889 hypothetical protein
MISFIDDHREAHGVEPICKVLPVGRPFDLPRSFRQAARSRQAVGRSRQDA
ALKIEVRRVFDQNFAVYGVRKVWRQLKREGLDVARCTVSRLMREMGLQGV
IRGKPIKTTVSDKAAPCPLDHVNRQFKAPRPNVM
>RPC_3060 IstB-like ATP-binding protein
MLTRDNTPAPITVDLARLPMLLTSLRLPTIGQMWADLAERSDREGWPAAR
YLAALLEHELAERYQRRIQRNMQDAHLPAGKSFATFDFAAVPMINKSQIT
ALAAGGSWLDKGANLLAFGPPGVGKSHLGAALGQALIENGYRVLFTRTTD
MVQRLQAARRDLTLQNVMEKLDKYDLLILDDLSYVRKDQAETSVLFELIS
ARYERRSLLITANQPFGGWEEIFPDKAMTVAAIDRLVHHAVILEMNTDSY
RRKAAVTRMTDRKASENSKQKPVTKTI
>RPC_2643 DNA repair protein RecO
MEWTDEGIVLGVRRHGESSAIVELLTRGHGRHLGLVRGGAGSKLRPLLQP
GNSVSAVWRARLDEHLGYYVLEGTRMRAAMLLASSHAVYGVTHLASLARL
LPERDPQPEIYERLERTLDDFDDVGEAAVHVIRFELTMLAELGFGLDLAN
CAATGVTSDLIYVSPKSGGAVSRAAGEPWRDKLLRLPPFLREGSAQRNDW
SDQDLQDGFLLTGRFLLRNVLEPRGQGHSDARDGFINAVVRLRTRELAET
APPK
>RPC_3080 conserved hypothetical protein, putative DNA helicase
MNNIENDSTEENAASMAGGGPSDPCVDLAVDIAATLTFASHQNSIPVIRS
IRIENPTDDGIQNVRLELTASPAFVRTKTWTIDRVGAQNGVTLSDRRVDL
DAAYLAGLDEAERGDITLRLMQGTAVLAETIIPVRLLARDEWGGVADMAQ
LLPSFVMPNDPAIFRLLRSAAERLAEHGHSSALDGYQSNDPNRAYMLTAA
IYSAIAGLGLHYAQPPASFELRGQKVRGPSKIVQDGLATCLDTTLLFAAA
IEAAGLNSVAILLDGHAFVGVWLVKRTLPRTVECDVAEIRKAIAPRELVV
FETTGVTHRPAMTFEQAIKLGETKLDEGAPQRFASAIDIARSRSGGIMPL
ASHQTADPDSAADDDAPSDIGLPAVPDIAMPADAVEQKPSSPAGRIERWR
NRLLDLGLRNRLLNFSDSKRTVAFVCPDIGYLEDRLADGIAIKLISLPEQ
NPLGERDPSLHRETRGQDLHRGFAAEALRRDELSSMLEPKELFARLTALY
RQAKSDITEGGTNTLYLAVGVLKWKKKPTDERVYRAPLLLLPVKLERSGA
SDRFRLRFHEDEPRLNATLLQFLKVEFDLSLPDFRDGLPQDTSGINVALL
FEQMRRAVRDAPGFEIAEDIALSTFSFAKYLMWKDLTDRVDSLRQNRVVS
HLIDNPEHAFPGAAETFPDENEIDRNFSPADIVMPLPADSSQIAAALAAT
QDRDFVIVGPPGTGKSQTIANMIASCLAARKTVLFVAEKTAALDVVYRRL
REHGLGDHCLELHSSKADRKHFFAQLKNSWEKRGDANASQWVTLNDRLQI
RRDELNAYARALHRKSPNGLTPYIAMGIAAAGHDRHAPALRWPSIGAHDA
VGYRQLDDLAKQLGQTFAAVTTRPVLALVHVEEWTGAWQEQLLKAARNLG
RAAAQAQAALAKLSARFGLSDVADTSIDGVGYFADLARNVIATAGADYTI
ILHKDFATLTRAIGELENAITSYRDGETGLSRRYPPDAVARIPIDELDRD
WRQANASMWPKSWFAARRVRRLLGSYAGAKAADPTTDLPRLRAMQATHHA
IAGNAISSTPLAFAGLDTDCDGLRRHLQSAERLRNSLVQLGEFAGDVSRV
AASIAAGLKGQANQPQIAAGKDFIARYEALIETIAAFETCAGLPLGDRAA
DDFLGRVSQQMDELEQSHNLFRDWSSWCAVRARGIAQGLAPLVADLENDA
VAPGDSQTAFRLGYARWWLPLAIDDSRELRSFRRFQHEHAITDFREIDDL
VRAHASQKVVSSLVHGLPAADAVPRKSELGALRHQMGLQRPSASIRDMIS
AMPESFAKLAPCVLMSPLSIAQYLPTQQTLFDVVIFDEASQIATWDAVGA
IARGRQTIIVGDPKQLPPTNFFGRNDADGGDVPQHEQDLESILDEAQASG
LPTRQLRWHYRSRHESLIAFSNWYYYGNHLITFPSPVTEDQAVSLTFVPT
GVYGRGSSRSNLEEARAIVADIGARLRSWLALPEPQRPTLGVITFNQPQQ
ELILDLLDDTRRGNPALEWFFAEDRIEPVIVKNLENIQGDERDVILFSIT
YCRDAAGRLPMTFGAINQDGGERRLNVAVTRARRELKVFSGIRADDIDLG
RSRAIGVQHLKAFLDYAVRGAVALPAQDAGSQGEMESPFEEAVAAQLERR
GWQVVPQVGVSGFRIDLGVRHPDHAGIYLAGIECDGATYHSSATARDRDK
VREQVLCGLGWTILRVWSTDWWFNAAEAIERLQQGLESALTESRASRAET
KAADSPDPIDESQITAAGGLENDDLAGSDAPKETESVAIGIAALNLPEIR
IASLDLPVEATPDSQANPTFAITDLSCFKADPDCFFEFSYRPTLQAMVDA
IIEQEAPLREDVLAQRIARAHGWLRTGGRIRAQIDLHPRKLDRTEETSGV
FLWKPGTILSRVPFRAALGPEHRRPLSDICIAELADFVIAHRTALQEDDP
PLVYARLLQVERLAASSRERLNEAIARAETLGI
>RPC_2042 transposase and inactivated derivative
MPSAVPLRTDFSAGELRLLAKRSKDNNQSRRLLSLAAIVDGMNRTDAARI
GGMDRQTLRDWVHRFSEAGPEGLLDNWASGPASRLSPDQQAELAAIVEAG
PDWEADGVVRWRRVDLKRVIFERFGVEYHERHVGTLLKKLGFLHISARPR
HPGQDAEIVEAFKKTPRAH
>RPC_4520 MobA/MobL protein
MAIYHLHVKVIGRKSGSSVVAAAAYRSGSRLRDERLDRSHDFSAKRGVVH
SEVMLPENAPQAWSDRERLWNDVEAFEIRKDAQLAREVEFAIPREMTQAQ
GIELARDFAQSEFVGRGMIADLNVHWDIGKDGMPKPHAHVMLTMRSVDEN
GFGPKVRAWNRTQMVERWRERWAELANERLAELDIDAHIDHRNFEAQGIG
LEPQSQIGASAQRIEGEGVEAADRAEMHREIARNNGERIIADPSIALDAI
THQQSTFTPRDMAKFAHRHSDGIDQFNAVMGAMRGAPDLVELGQDARGED
RFTTRDMIQTEQRLHRAAQLMAERERHAVEDADREAALARAEQRGLVLSG
EQADALAHVTDGRDLGIVVGHAGTGKSAMLGVAREAWEAAGYEVRGAALS
GIAAENLESGSGIASRTIASMEHGWGQGRDLLSARDVLVIDEAGMVGTRQ
LERVLSHAAEAGAKVVLVGDPQQLQAIEAGAAFRSIHERHGGVAIGEVRR
QREDWQRDATRDLATGKTGAAIQAYARGGMVHVAASREQARVDLIDRWDR
DRQASPDHSRIILTHTNDEVHALNAAARERMRAAGDLGEDVRVTVERGAR
SFASGDRIMFLQNERSLGVKNGTLGTIERVSALSMSARIDDGRSVEFDLK
DYNRIDHGYAATIHKAQGMTVDRTHVLATPGMDAHSSYVALSRHRDGTDL
HYGREDFAGQDRLVRTLSRDRAKDMASDYDRADPVQRYAERRGITFRERV
AEIVQKIVPEKLRGMFDGLRFPGDVPGHDGGRRPERETPERESATAAVRR
RTDAPERTVAADTDVALRQARTKALIRHARAVNAIFEMQQQGGKASSEQV
KELQEARKEFEGVRPYGSHDAEAAYKTNPELVELAASGNPARAIRALQLE
TELRTDPARRADRFVERWQKLDRTSQRQYQAGDMSGYKSTRAAMGSMAKS
LERDPQLESILAGRKQQLGIAFETGRRLGQELAFTHGIDLGKGRGIGL
>RPC_1775 Chromosomal replication initiator, DnaA-like
MLDTPCAIAPSSAPPGQPPSPDQIVRRVVACVAADFGLSVSLLTGAPRGS
PRIALARQIAMYLSHIGFGLSFEAIGRLFGRDRTTVAHACRVVEDSRDDV
WMDGRLATLERICGTATPEPAASRRAAGARR
>RPC_0628 phage integrase
MPVKNDTYFRHLKPAEKDYKRSDSGGLFMLVTKTGSKLWRYGYNFDAKQK
LLALGQYPLISLADARTKRDDAKRLLAEGIDPSVERKAERRDARIARSHT
FEAVAKELMDKFEAEGDAPTTLKKKQWLLDFANKEFGKRPIAEIKAPEIL
DALRKIEKRGRHETATRVRSTVGAVFRYGIATGRAEQDPAADLRGALITP
TVTHRATIVEPDAVGALLRAIDGFEGNAAIRYALRLAPLFFVRPGELRKA
EWAEFKLENAEWRIPAAKMKMRRPHRVPLAHQALSILRELQGITGGSKYL
FPSVRSWHRPISDNTLNAVLRRLGYDKTELTVHGLRSTASVLLNESGKWH
ADAIERQLAHQEQNEVRGAYIHAAEFWDERVRMMCWWADELDRLRDHGRV
VKIRA
>RPC_4332 DNA-3-methyladenine glycosylase I
MTRAVRHSDGLTRCPWPGEDPLYVAYHDSEWGVPEYDDRALFEKLILDGF
QAGLSWITILRKRDNFRKAFDDFLPEKIARYDAEKVHALMNDAGIVRNRA
KIEGTINSAKSYLEIMEKGPGFSSLLWDFVDGKPLVNNFKSTASVPAATP
LSAAMSKELLSRGFKFVGPTIVYAFMQATGLVNDHLVSCFCHERCGAMKR
PAAKAKRK
>RPC_0994 MobA/MobL protein
MRRRSPSRDFFEGGRAYTSFRRALRRGNDLIAMAIYHLHVKVIGRKSGSS
AVASAAYRSASRLRDDRLERSYDFSAKRGVVHSEVMLPENAPQAWRDRER
LWNDVESFEVRKDAQLAREVEFALPRELTQRQGIELAHDFVQSEFVDQGM
IADVNVHWDMAEDGMPKPHAHVMLTMRAVNENGFGPKIRDWNRTEMVERW
RERWAEIANQRLAELDIDARIDHRSLEAQGIGLEPQSQIGATAQRIESQG
IEGRGIEAATNVADRAEMHRQIARGNGARIIADPSIALDAITQQQSTFTQ
RDMAKFAHRHSDGIDQFNQVIGTMRGAPDLVELGKDGRGEDRFTTRDMIE
TEQRLHRATELMAERDRHEVQDADRLAARARAEARGLMLSAEQADALAQV
TNGRDLGVVVGHAGTGKSAMLGVAREAWEAAGYEVRGVALSGIAAENLAS
GSGIASRTIASLEHGWAQGRDLLSARDVLVIDEAGMVGTRQLERVLSHAA
EAGAKVVLVGDPQQLQAIEAGAAFRSIFDRHGGAEIGEVRRQRQDWQRDA
TRDLANGKIGHALDAYRSHGMVHAAPTREDARKNLIDRWDRDRQASPDRS
RIILTHTNDEVHALNAAARERMRAAGDLGEDVRVTVERGARSFATGDRVM
FLQNERGLGVKNGTLGAIEHVSQQSMSVCIDDGRSVEFDLKDYNRIDHGY
AATIHKAQGMTVDRTHVLATPGLDAHASYVALSRHRDGMELHYGRDDFTS
QDRLTRTLSRDRAKDMASDYDRVDPVQNYAERRGITFRARVAEIVRKIVP
ERVRGMFDGLRPPTVPAPEARSEPERESAAAAVRRTTDDAPGRTVAADSD
AALRQARTKALIRHARAVDMIFEMQQQGGKASPEQVKELQEARKEFEEVR
PYGSHDAEAAYKTNPELAEQAASGNPARAIRALQLETELRTAPARRADRF
VERWHKLDQTSQRQYQAGDMSGYKTTRASMGVMAKSLERDPQLESILANR
RAELGIQMESGRRLSAALAFAHGIDIGRGRGIGI
>RPC_2496 exodeoxyribonuclease III (xth)
MKVPMRIATWNVNSVRQRLDHLLVWLKDCAPDIVCLQEIKCVDEAFPREA
IEALGYNVVTHGQKTFNGVALLSKYPLEEATPRLAGDDDDLHARFIEGVV
SLKSGVVRVACLYLPNGNPPETEKYAYKLKWMSRLLDYAKERLKTEEPLI
LAGDFNVIPAPGDVYNPAAWVGDALFKPQTRESFQALLGLGLSDALRAVT
DAPSQYTFWDYQAGAWQKNWGIRIDHLLLSPQAADRLTGVGIDKHVRSWE
KPSDHVPVWIDLDLAAA
>RPC_4137 excinuclease ABC, B subunit
MAKTPDKPNKPIKTPKSKAHRPDVKPIGPALAELLNPAINRGDAGMGSGT
GLQPPPDNSRDRRTGGEAAIHRARASTTQVPPPNPPPQAGEGSARRAPHT
VARVESVEGQPSPPLPLAGEGRGGGATRTTAPGFAEAPQSDFATPNYGTT
ATIPTLDPELAKQLGFTTEEEDEAALARPPRNKMEALGVQATADALENLI
RDGRPEFKGEDGNVKLWTPHRPPRPEKTEGGVRFVIKSEYEPKGDQPTAI
KELVEGISRNDRTQVLLGVTGSGKTYTMAKVIEATQRPAIILAPNKTLAA
QLYGEFKSFFPDNAVEYFVSYYDYYQPEAYVPRTDTYIEKDSSINEQIDR
MRHAATRALLERDDVIIVASVSCIYGIGSVETYTAMTFALKKGERIDQRA
LIADLVALQYKRTQADFTRGTFRVRGDVIDIFPAHYEDRAWRVNLFGDTV
ETIEEFDPLTGHKQDELEFIKIYANSHYVTPRPTLLQAIKSIKAELKWRL
DQLNDQGRLLEAQRLEQRTTFDIEMMEATGSCAGIENYSRYLTGRRPGEP
PPTLFEYVPDNALVFADESHVTVPQIGGMFKGDFRRKATLAEYGFRLPSC
MDNRPLRFEEWDMMRPQSVAVSATPSAWELNESGGVFVEQVIRPTGLIDP
PVNIRPARTQVDDLVGEVRATAQAGYRSLITVLTKRMAEDLTEYLHEQGI
RVRYMHSDIDTIERIEIIRDLRLGAFDALVGINLLREGLDIPECALVAIL
DADKEGFLRSETSLIQTIGRAARNVDGKVILYADRITGSMERAIAETDRR
REKQVEYNTEHNITPESIKKSIGDILNSVYERDHVLVEIGGGGQGGSWSD
DVGAIGHNFETVLADLETRMREAAADLNFEEAARLRDEVKRLRATELAVV
DDPTAKQRTVQGKAGSYAGAKKYGAAANLPQQSKERGGNNTPKVRGATGA
ATQRDGSSPSPLAGEGRGGGSKAAASRIHKPDLDEMGIASWHEVMPDRKG
RAKPRKPTLDEMGPGTESRIFQPKTSRESGPEFGPSPRSSGGAPGHRGGW
KKR
>RPC_4152 DNA methylase N-4/N-6
MSSAKSTPKQLAPNHLYYGDNLDILGGSIASESVDLVYLDPPFNSNASYN
VLFHAPGGESSPAQIEAFDDTWHWSPTAERAFDEVIQSGNSDVSEMLRAM
RSFLKDNDMMAYLAMMAVRLLELHRVLKPTGSLYLHCDPTASHYLKILLD
AVFGKRQFKTEISWRRQSAHNDAKQGRTQYGNVRDIIFFYTKSDKWNWNQ
QYTPYSEEYVRDFYKFSDPDGRRYRLSDITGPGGAAKGNPSYEIFGVTRY
WRYSKLRMQQLINEGKVIQTRPGTVPAEKRYLDEMPGVALQNDWSDIGLP
SRKENLGYGTQKPVALLERIISASSNEGDVVLDPFCGCGTTVHAAQKLNR
NWIGIDVTHLAINLIKRRLIDAFPHAQFEIHGVPKDIGAAQALATQDKHQ
FQLWALSMVEAQPYKGGQKGADGGVDGYLYFKPDGKITEKAIVSVKGGGN
VGVGMIRDLIATVDREKAKIGIFLTLEDPTTRMRTEATAAGFYESPLHGK
FEKIQILTIEDLFDGKRPHIPWVDPSVFRKAKRENLEKQSTLDL
>RPC_2315 DNA polymerase III chi subunit, HolC
MTEVLFYHLQNMTVEKVLPSLLEKSLQRGWRVVVQATTEERADALDTHLW
TYRDDSFLPHATWRVADASQQPIVLTADEANPNGAKVRFLIDNAALPTDV
ALYDRLVLVFNGDDEDSVVMARAAWTDSKSRGFAVIYRQADGSGGWQSRE
>RPC_0363 DNA mismatch repair protein MutS
MMEQYHEIKAANPGLLLFYRMGDFYELFFEDAEIAARALGITLTKRGKHK
GQDIPMCGVPVERSDDYLHRLIALGHRVAVCEQTEDPAAARARKSVVRRD
VVRLITPGTLTEDTLLDARANNYLLAIARARASAGADRIGLAWIDISTAE
FIVTECAPAELAATLARINPNEAIVTDALYSDPELGPLLRELPAVTPLTR
DVFDSATAERRLCDYFAVATMDGLSAMSRLEATAAAACVTYIDRTQLGKK
PPLSPPSREATGSTMAIDPATRANLELTRTLSGERRGSLLDAIDCTVTAA
GSRLLAQRLAAPLTDVEQIAQRLDAVAALLPDPGLREALRATLRAAPDMS
RALARLSVGRGGPRDLAALRDGLLAADQALAQLGALEVPPKEIQTAMAAL
RRPSRDLAQEFSRALADDLPLMKRDGGFVREGYHDALDETRKLRDDSRLI
VAAMQARYADDCGVKGLKIRHNNVLGYFVEVTAQHGDKLMAPPLNLTFIH
RQTLAGQTRFTTAELGEIEAKIANAGDRALGLELEIFERLVALVQAATDD
LRAAAHGFAALDVTLALAKLAVDDNYVRPEVDGSLSFAIEGGRHPVVEQA
LRRDGQPFIANACDLSPGPGQQSGQIWLITGPNMAGKSTFLRQNALIALL
AQIGSFVPASRARIGIVDRLFSRVGAADDLARGRSTFMVEMVETAVILNQ
ASERALVILDEIGRGTATFDGLSIAWAAIEHLHESNRCRSLFATHYHELT
ALSAKLPRLFNATVRVKEWHGDVVFLHEVLPGSADRSYGIQVAKLAGLPP
SVITRAKSVLAKLEAQDRGQSARALAEDLPLFAVTARAAAEPSPPSEAER
LIEALKALHPDELSPREALDALYALKAKLGKA
>RPC_4440 transposase IS116/IS110/IS902
MEQIIRIGMDTSKHFFQLHGVDAAEKPVLRKKLRRKEMLAFFAKLPPTPI
GIEACGAAHYLARELGKLGHVVKLLAPQHVKPYVKRNKNDGRDAEALCEA
MSRPTMEFVPVKTAEQQAALMLMGLRQQLIARRTQLSNAIRGYAAEFGLI
SPRGLDKIEPLLLRIAQDDTVPTLARELFALQGQDYARLQNELKVIDAKL
LAWHRADACSRRLAQIPGVGPIGASALVMKTPVPQTFASARAFAAWLGLT
PKDHSTAGKLRLGTITRAGDELLRSLLVAGATAVIQQVRRGRGRASPWLL
ALLARKPPKLAAVALANKIARIAWKLMLTGENYDGARMLNASPHAA
>RPC_1185 metallophosphoesterase
MRFSFIHAADLHIDSPLAGLSLKDQAVAARFAQAGRRAVEALIEQTIASK
AAFLIIAGDVFDGDWKDVSTGLFFVRAVSALDRAGIPVVMVKGNHDAASV
MSRDLPYPDSVTVFGSGKASTVTLEAHRVALHGRSFPNRLTADFVESYPP
RRDGWLNIGVLHTSLDGTRGHEGYAPCSVDDLKRFGYDYWALGHVHAAEI
VSRDPWIVYPGNLQGRSVRETGAKGAVRVTVEDGRIVEVTPLALDGARWA
QLTLDVAGISSEDEMLARCRAALADAQAQSEGRPLAARITLTGATSLHNH
LVARRETLQDELRAIGFQLGAECWVEQLKVRTSLPVLTGAAMSAADALDV
DQLLREAASDPEFATVLAELTDTIKAKLPKDLHDELDRSEALTRLADDAR
ALLAGDVA
>RPC_4688 nuclease (SNase-like)
MVTRFGLAIALLLSPVLAEAADVSGVPKIREGDQVTIGSSRIRLGGIDAP
SLDQLCLNPKGERWSCGVAARDELVRHAGSKSWSCHIQRTDRFGRSVGRC
EVEGEDIQKWLVQSGWALAYAKISHDYDADQKVARDAKAGLWAGAFIAPW
DWRVRNKATTILGAVKPPPTANAILLASASGPVAPSPECTIKGNVNRSGH
CIYHRPQSRWYAKIQMHVSKGTRWFCSVEEAEAAGCRETRR
>RPC_0751 ATP dependent DNA ligase
MNRFAELLDRLAYEPGRNAKLRLITSYLHGTEDPDRGYALAALTGALSFK
HAKSGLIRELIAARTDPVLFALSYDYVGDLSETVALMWPTSFSPPQRDVS
VFPPRKGEGAGRALSARNDPTPTLTEVVTTLATLGKAELPAQLARWLDEL
DETGRWAILKLVTGSLRIGISARLAKTAAAALGNKDPHDLELIWPGLAPP
YLELFAWLEGRAEKPINADPAPFRPVMLAHAIEDADFNTLDAADYIAEWK
WDGIRVQAVSGRDQHGHLISRLYSRTGEDISQSFPDLLPSLRRPGAIDGE
LLVLRENRVQSFNVLQQRLNRKSVTPKLLKDYPIHLRAYDLLGDGEVDLR
TLPFEQRRARLECFIAELNDRRIDLSATIPFADWQALTAARQAPANAGAG
LDAAAVEGVMLKRRDAPYLPGRPKGQWWKWKHDPHVIDAVLMYAQRGHGK
RSSYYSDYTFGVWTSGEGGDVLVPVGKAYFGFTDEELLQIDRFVRRNTTE
KFGPVRHVVHEPDQGLVLEVAFEGLARSPRHKSGVAMRFPRISRLRWDKP
PRDADRLETLQRLLTAEAAIPPAAASGH
>RPC_4361 Ribonuclease H
MSGTGRQFRVARAVISPQHPGMIRDKEKPAPTKPGKGVIAVAPPSFRRER
ALLKRGVWPVAGCDEAGRGPLAGPVVAAAVVLDPKRIPKGLDDSKRLTAD
KREQLFEQICATAAFAVAYASPARIDRDNILRASLWALAKAVHALPEMPR
HVFVDGRDKIATSCDCDAVIGGDGLVLSIAAASIIAKVSRDRLMCRLAED
CPGYGFENHKGYGVPEHLAALDRLGPSKHHRRLFAPVVAARQKHQPETAT
VPAVAADLFEFGAPPV
>RPC_0003 DNA replication and repair protein RecF
MTVSKIHRLTLTHFRNYRAASVTVRGDVVVLVGPNGAGKTNCLEAISLLS
PGRGLRRATLDDIADNHGDGSWAVSAEVEGALGLATLGTGIDPRTEAAAT
TRRCRIDRENVGSAAAFGDHLRMVWLTPAMDGLFLGAASERRRFFDRLVL
AIDSQHSSRVSALDRSLRSRNRLLEQRSHDSHWLDAIERETAELAVAVAA
MRGETVTRLAAALAQRSADSAFPSATIALDGWMENALRSEPATAVEDRYR
TSLRDNRARDAAAGRTLDGPHLTDLRVIYTPKNMPARDASTGEQKALLIG
LVLAHAYLVAEMTGITPLLLLDEVVAHLDPSRRKALFGELARLGAQVWMT
GADPAAFVDLGEGGELFEVDNGRIAPHGG
>RPC_0523 NUDIX hydrolase
MNLLLVVAVALIDADNRVLIAQRPPGKTLAGLWEFPGGKLDDGERPEQAL
IRELDEELGITVREPCLAPLTFASHAYEDFHLLMPLYICRRWEGTATARE
GQTLAWVRPNKLRDYPMPPADIPLLSHLIDLLQ
>RPC_2632 Uracil-DNA glycosylase superfamily
MMAIARSEPDRNCPLCPRLVDYRLAVRARAPDWFNAPVPTFGDPDAALLI
VGLAPGVQGANRTGRPFTGDFAGDLLYATLIEHGFAKGVYQARPDDGLRL
VDCRIANAVRCVPPQNKPRPVEINTCRQFLSAVLETMPRLTAIVALGRVA
HDSTVKALGLRASAAPFGHGAVHTAGARTLYDSYHCSRYNTNTRVLTPQM
FREVFAKVRADLDGDKPKRAMSKTSS
>RPC_1150 exodeoxyribonuclease VII, small subunit
MADAATDVKKLTFEHAIEELESIVKRLEDGKVPLEESVAIYERGEALKRR
CEELLRTAEARVDKITTDSSGAVTGTTPLDVE
>RPC_1207 exodeoxyribonuclease III (xth)
MKVATFNINNVNRRLENLLHWLKQARPDVVCLQELKCRDAEFPARAIARA
GYQAVWQGENTWNGVAILSRGGAPIVTQTRLPGDRSDLQSRYIEAAIDGI
VVGCLYLPNGNPQPGPKFDYKLAWFKRLAGHARKLLRQDVPVVLAGDFNV
APTALDIYPTRSWDHDALVQPASRAAFARLVKQGWTDALRELHPDRRIYT
FWHYMRQRYERDAGLRLDHLLLSPQLAPRLRQAGVDRAVRGRPGASDHAP
TWIVLK
>RPC_3750 histone-like DNA-binding protein
MATQMTKSQLIEKIATQSELAKKDVKGVLEAMTEIGYKELKKNGVFLVPG
FAKFVVIKKPATKARKGTNPFNGEPMVFKAKPARKIVRARPVKAAKDSV
>RPC_3926 Superfamily I DNA and RNA helicases and helicase subunits-like
MPPTHAKRQPDTLAERFALEETFLSSPNTAALKSAVIRAIDRRTGDPVVL
KYWEKTGTAVDTDFRELWRHEMRQSERVRAYPRADEVVVEVLASGESDDA
FYIVMPSDVAPLEHASRFVRPDHWLRALQGPRQRALLWKNLRRLAESLGA
VHGQGLVHGRIDGRAVYSTGAATTPDFRLGGFEFCLRVAELNKAPLHVIA
KSRPVGSVIFSFLDDWRALGQVGADLIGLDADKLEEEEIQFIEGRAKIDL
RASEIDLIRLLFEPERNRILDAATVTSRIDAILNELDAEAFADNGRYVLA
LRLGPTSQLSATLCAASGDTFDNDDSGSQVEFIRADLETGASLTRTARGD
LLLMTESLVYDLQPLRVAGADETWNVASCNNARFRDDVRLGRRETIALPA
HRIEIVRFAAASRRLNELRSDALDWSAAFDMTPDGDPTLVVRRGLLLAQI
AEALFKGAEIAPVELVNQRRQGDKRIVEIAASDSEHRTRLSQALGVGEPH
QLMRRLFDREEADVDAEWQLTEAAGLGMTVRSAAGVRFIRPVQKNHRRLY
EFEILDGVVPPHSQLHLRKVDETGTEQVLRRRLRMLTTLSTQSELARMLA
DPRERLRTYQDDPLVEDDHFGKLDESKQEALRSIWSTGPGQFVVGPPGVG
KTRLVTEVVRRALAGDPTIRLLLSAQAHQALDHLAASVQKMLKKTGLDND
VILVRSKADNGADLSGAQTPDRAKAYLQELKQSSLYRRAPRAIQQTLRDM
TTAAGVTGNLRARLSLTTLRQRRSFEALVLQSANVLFSTTNSGDLARLID
DGALFDWTIIEEAAKATGSELLAPQLLSMRRMLIGDHNQLPPFDTDRIAE
FLQDQTRVKSALAESDLLIGNIFRDFGLDDLKEAIEDDGVLSETCASARR
MLLLFESLVTGELDRQKRSDQRRRRVATELLQQHRMHPAIATVISECFYD
GTLETPKERETEFHSEQPPFTITDERLPASPIVFIDLPYVQREGSAGEQR
PTYHNPAELQAALSVLGMLKPAPKKPEEPSTLAVLSPYNEQVGRLGRAIE
DALQGKLVNIVDFKPGTNASGFESTVDSFQGSEADVVVVSLVRNNDHVGR
RALGILRDRRRMNVLLSRAKWKLIIIGSMEFLRVQGRRYRRHSTDNRSVP
AFLAKMSEVFDQLAKETLPDGKTPKFKLVTAASLMTVAKS
>RPC_2328 Chromosomal replication initiator, DnaA
MVARVQPRQLALALPHAESLSRDDFLEGPSNSEALKLIDHWPDWPNRVML
LTGPEGSGKSHLSSIWAEQAGARAITAHALTSSAVPGALATGALVVEDLC
PPCIDERALFHLLNLAREDQAYVLITSRLPPSALEVDLRDLRSRLRAVPA
VTLLPPDDQLFRALIVKFCADRQMSVDESLVSFVANRIDRSFIAARQAVE
RLDTEALRLGRPVTRALAAELFRDL
>RPC_3652 N-6 DNA methylase
MTTTTDIVAKLWSLCHVLRDDGVTYNEYVTELTFLLFLKMLEETGKESRL
PKGYRWAALAKREGLDQLDYYKRLLLDLGKPEVKDGLVRAIFTDAQTRLR
KPTNLKALTSSIDQLDWFSAREEGLGTLYEGLLEKNASDKKSGAGQYFTP
RPLIDCIVRLMKPHVGETVQDPAAGTAGFIVAADRYIKDRTDDLYKLPEQ
QVFFQRHHAFNGAELVPDTHRLCMMNLLLHGIEGGVELADTLSPDGERLS
KADLILTNPPFGTKKGGGRPTRSDFSITADTSNKQLAFVEHVVRALKAGG
RAAVVVPDNVLFEDNTGRDLRTWLMDLCSLHTILRLPTGIFYAQGVKTNV
LFFQRGKTDKANTKTVWVYDLRANMPAFGKTRPLTAADFAEFEKAYGSNP
AGSAKRKDQGEEGRWRGFTRDQIKARNDNLDISWLRDTEVEAEEQLTEPE
DIAAAIIGHLKAALEEIETLSEELESPSNKDAAMPEAAE
>RPC_0337 transcriptional regulator, AraC family
MAAGIVPAYITTMMNLAVTDHRLAKPGPQDSALRDYDSVRRAIGFISERW
RAQPAIESIADAAGVTPDELHLLFRRWAGLTPKAFMQALTLDHAKSLLRD
SASVLDAALDSGLSGPGRLHDLFVTHEAMSPGEWKSGGTGMTLRYGFHPS
PFGTAVVIESARGLAGLAFADPGEELTALADMQRRWPRASYVEDAAGTAA
LAQRIFDTRQWRADQPLRVVLIGTDFEVRVWETLLKIPMGRAVSYSDIAG
CISLPKASRAVGAAVGKNPVSFVVPCHRALGKSGALTGYHWGLTRKRAML
GWEAGQVGME
>RPC_0151 phage integrase
MARGFGKLTVKTVEHLSRRGMHADGGGLYLQIAEGGSKSWLFRYKLHGRT
HWHGLGSLRDVGLEEAREKATGARKVRRNGGDPIQAKRQAEAAARIEAAK
AITFGEAAKRFIKANRAGWKNAKHADQWVMTLLGVDQKGKPSKNDYCKTI
RDLPIGAIDTTLVLRIIEPIWASKTETATRIRSRIEQVIDAAKAKGEFNG
ENPARWKGHLDNLLPATSKVRKVRNHPALPYRQLPDFMRKLRERDGAAAA
ALEFQILTAVRPGNAVAAKWDQIDRQTSVWTIPAALMKSDAEHRVPLSKA
ALAVLDRMEATKDDSEYIFPNTKGKPLSDASMAAVIDRMNELERRWIDPK
LDREIVPHGFRSSFRDWAAEHGYDDPVAEAALAHKVSDEVVAAYRRTTFL
DLRNRMMEDWADYCARPSSSGDTVVAFRA
>RPC_0876 DEAD/DEAH box helicase-like
MTFLTTSPPLARALAERNYNDPTPVQTAVLADQAAGRDLLVSAQTGSGKT
VAYGLAIAKNLLGDAERFEQAAAPLALIVAPTRELALQVHRELAWLYAYA
DARVVSCVGGMDPRQEQRELARGAHIVVGTPGRLCDHLRRGRLDVSQLKA
VVLDEADEMLDLGFREDMEFILKTTPPTRRTLLFSATLPRGIVALAKQYQ
QQAFRVEVANGEGGHADIEYQAIRIAPGDVEHAVVNVLRFHESPSTIVFC
NTRNAVKHLQTALLERGFSVVALSGELTQNERTMALQSLRDGRARVCVAT
DVAARGIDLPNLALVIHADLPNDAEVMQHRSGRTGRAGKKGVSVLLVPPA
RRRRAELLLNLAGIDAVWGTAPSADEIRKLDQERMFQDALFAEEPSAEDL
VLAQALLAERSPEYIAAALARLYRARLPSPEDILDPGERGARSREPRATT
RGDSRPRAEDRDYSPKARPGKASTRHAMEGGVWFRAAIGRKKNAEARWLL
PMICRRGGIDKQDIGAIRIHDTTTEFEISGAAAESFAAMIRRPDKEDNIR
IEAMGDAPAAQQAPDRRPPAGKPYERKPSSDKSYDRNHAGDGAPRDASFK
TKKSYDKPGYDKPAYDKPAYDPLANDKPMYAEVSPSGGSFELKPAFDKKP
KKPKKKFRE
>RPC_3642 transposase IS116/IS110/IS902
MEQIIRIGMDTSKHFFQLHGVDAAEKPVLRKKLRRKEMLAFFAKLPPTPI
GIEACGAAHYLARELGKLGHVVKLLAPQHVKPYVKRNKNDGRDAEALCEA
MSRPTMEFVPVKTAEQQAALMLMGLRQQLIARRTQLSNAIRGYAAEFGLI
SPRGLDKIEPLLLRIAQDDTVPTLARELFALQGQDYARLQNELKVIDAKL
LAWHRADACSRRLAQIPGVGPIGASALVMKTPVPQTFASARAFAAWLGLT
PKDHSTAGKLRLGTITRAGDELLRSLLVAGATAVIQQVRRGRGRASPWLL
ALLARKPPKLAAVALANKIARIAWKLMLTGENYDGARMLNASPHAA
>RPC_3160 transposase IS116/IS110/IS902
MEQIIRIGMDTSKHFFQLHGVDAAEKPVLRKKLRRKEMLAFFAKLPPTPI
GIEACGAAHYLARELGKLGHVVKLLAPQHVKPYVKRNKNDGRDAEALCEA
MSRPTMEFVPVKTAEQQAALMLMGLRQQLIARRTQLSNAIRGYAAEFGLI
SPRGLDKIEPLLLRIAQDDTVPTLARELFALQGQDYARLQNELKVIDAKL
LAWHRADACSRRLAQIPGVGPIGASALVMKTPVPQTFASARAFAAWLGLT
PKDHSTAGKLRLGTITRAGDELLRSLLVAGATAVIQQVRRGRGRASPWLL
ALLARKPPKLAAVALANKIARIAWKLMLTGENYDGARMLNASPHAA
>RPC_4803 Holliday junction DNA helicase RuvB
MTTPSRIVTPERRVDDVGDTALRPQLLSEFVGQQQARANLQIFIDAARKR
GEALDHVLFVGPPGLGKTTLAQIVARELGVGFRATSGPVIAKAGDLAALL
TNLEERDVLFIDEIHRLSPAVEEVLYPAMEDFQLDLIIGEGPAARSVKIE
LSKFTLVGATTRAGLLTNPLRDRFGIPVRLNFYTIAELESIVTRGARVLS
IGITPDGANEIARRARGTPRIAGRLLRRVRDFASAADKSAIDRGIADHAL
SALEVDAAGLDAMDRRYLSTIAMNYGGGPVGVETMAAALSEPRDAIEDII
EPFLIQCGYLQRTPRGRLLTSHAFKHLGLAEPARDAAQFGLFGQGGEEG
>RPC_0957 Ferritin and Dps
MTKSKTSDVAAELDTPSDLPQQAVDKISATLNVLLADAFALYLKTKNFHW
HVSGRHFRDYHLMLDEQSDQVLATTDLLAERVRKIGGTTLRSIGHIAKLQ
TLQDNNDAYVPPQQMLIELMNDNKKVAAAMRSAHKVIDELEDVATASLLE
NFIDETERRTWFLFEASRQEGGNEG
>RPC_0376 Excinuclease ABC, C subunit-like
MGIFVYMLRCADGSYYVGSATGDDLAPRVAQHDAGSYPGYTSTRRPVTLV
WSEHFDRITDAIAVERQIKGWSRAKKEALIRGDWGDISRLARRRGRVCSG
ESTV
>RPC_3910 transposase, mutator type
MTDDMMNLRSLVEKTPDADLLREMIGFAAQRLMEMEVGSLTGAGYGEKTP
ERLAQRNGYRDRDWETRAGTVELRIPKLRKGSYFPGFLEPRRMAEKALTA
VIQEAYVHGVSTRSVDDLVKAMGMSGISKSQVSRLCEEIDDKVKAFLGRP
IEGDWLYLWIDATYVKVRQAGRIVSVAVIVAVGVNSDGRREILGLDIGPS
EAETFWTGFLRKLARRGLRGVKLVISDAHEGIKAAVSKVFNATWQRCRVH
FMRNVLAHAGKSGRRVVSAFIGTAFAQDDAEAARTQWRRVADQLRPKLPK
LAAFLDEAEVDVLAYMSFPPAHRTKLHSTNPIERLNGEIKRRTEVVGIFP
NEDAIIRLVGAILLEQNDEWAVQRARYMTLETIAPIGDDPAVSLPAFAS
>RPC_3703 DEAD/DEAH box helicase-like
MERTNLLTSFQDFGLAEAITRALKEENYLTPTPIQAQTIPLAMAGRDVVG
IAQTGTGKTASFALPIIHRLLENRIKPQPKTCRVLVLSPTRELSGQILES
FNAYGRHVRLTSALAIGGVPMGRQVRSIMPGLDVLVATPGRLLDLVQTNA
LKLNQVEFLVLDEADRMLDMGFINDIRKIVAKLPIKRQTLFFSATMPKDI
ADLADQMLRDPARVAVTPVASTVERITQRIIQVDHSAKPTLLAQILKQEN
VNRALIFTRTKHGADKVVKGLARAGITADAIHGNKSQNHRERVLAAFRAG
EIRTLVATDIAARGIDVDGITHVVNFDLPNIPETYVHRIGRTARAGAEGI
AISLVAGEEMAFLRDIEKLIRITLPREDRRTPGHRDTVAKVSQHRGAHAA
PHVHSPRSNEVAPSSNGPRRRRRPTGGTIAAPVARHEPSRHEPTARPQPQ
AAAKEGIQGVAFLHRESRPGTQPNRKQRPQR
>RPC_2644 DNA topoisomerase IV, A subunit
MGKRLIPPEPAEIHDVQLREALEERYLAYALSTIMHRALPDARDGLKPVH
RRILYGMRLLRLDPGTPFKKSAKIVGDVMGSFHPHGDQSIYDALVRLAQD
FSSRYPLVDGQGNFGNIDGDNAAAYRYTEARMTDVARLLLDGIDEDGVAF
RANYDGQSKEPIVLPGGFPNLLANGAQGIAVGMATAIPPHNAAELCDAAL
HLIEKPDAKSKTLLKWVKGPDFPTGGVIIDSRESIAEAYTTGRGSFRTRA
KWHQEDGARGTWVVAITEIPWLVQKSRLIEKIAELLNEKKLPLVGDVRDE
SAEDIRVVIEPKSRAVDPELLMESLFRLTELESKIPLNLNVLVKGRIPKV
LGLAECLREWLDHLRDVLLRRCSYRKGQIEHRLEVLGGYLIAYLNIDKVI
KIIRTEDEPKPVLMKAFNLTDIQAEAILNMRLRSLRKLEEFEIRTEDKNL
RAELKGINAILKSETEQWAKVAEQVRKVREMFGPKTALGKRRTMFADAPE
HDLAAIEEAFVEREPVTVVISDKGWVRTLKGHVADLSGLTFKTDDKLGQA
FFAETTSKLLLFATNGRFYALDVAKLPGGRGHGEPIRMFIDLDQDAAIVA
LFVHTGGRKFLVASHDGQGFIVNEDDCVGNTRKGKQILNVEMPNEARAVC
TVSGDSVAVIGENRKLLIFALDQVPEMARGRGVRLQKYKDGGLSDIATFT
AKDGFSWRDSAGREFSASIKELAEWRGNRADAGRMPPKGFPKSNKFGRGI
E
>RPC_0545 helicase-like
MAFSTSGSASANDRAPGAGVTAVLGPTNTGKTHLAIERMLAHSSGVIGLP
LRLLAREVYNKIVDRAGPDAVALITGEEKIKPPKPRYWVSTVEAMPRDLD
VSFLAVDEIQIAADLERGHVFTDRILHRRGRDETLLLGAATMRPIIERLL
PGASIVTRPRLSQLEFAGDRKITRQPRRTAIVAFSADEVYAIAELIRRQH
GGAAVVLGSLSPRTRNAQVAMYQSGDVDYLVATDAVGMGLNLDVDHVAFA
SDRKYDGYQFRRLNPSEFAQIAGRAGRATRNGTFGTTGRCAPFEPELVNA
LQNHTFDSVKTLQWRNSRLDFSSLGALQVSLSLTPSHEALTRAPIAEDLR
VLDHAARDGEVRDIAHGAAAVERLWDACQIPDYRKIAPAAHAELVTTLFG
YLMRKGRIPDAWFATQIAQADRTDGDIDTLSGRIAQIRTWTFVANRPDWL
ADPEHWQGISRDLENKLSDALHERLTERFVDRRTSVLMRRLRENTMLNTE
IGKTGEVIVEGHVIGRLDGFTFAPDAAEAGSDAKALQAAALKALAGEIES
RAEKLAAAPDDQFVLASDGTVRWTGDAVAKLVAADDALHPRLRIVADDRL
AGAAREAVQTRLELWLKTHVEKLLGPLFDLAKAEDVTGIARGIAFQLIEA
LGVLERSKIAAEMKDLDQASRAVLRKYGVRFGAYHIYLPSLLKPAARSLA
SLLWVQKRDQVDLSALSGAQHLAGSGRTSFPVDKQLDRDAYRTLGYRQCG
ERAVRVDILERLADLIRPALSWRETSPGEKPAGAFDGRGFIVTQAMTSLT
GSAGEDFASILRALGYRMEKKPPLPPAPPKPVVVETAPVEATDPEANPTE
TTVADQAAPDATVAETIVSETSATDAAIADPEHAAAADIGAAVQEAVTEA
PPLDPALTESAGEVPAVAEPTAAPQIAAEVVSPDAEAPAESASAETVSEA
ADTPTSDAPGSEAIATEAVAVLTTAEADPAVVAGSDPALAADAAVAVPEL
VEVWRPGGRADDHRPRHDRNRYRNPDRAAQAGQPASAGEAGEAEQGKGDR
PNRGRRDRKPEFRRPRTDAPVAAAADAPAAEGTPDARPAQAPRPPRDRER
FQGKGGRGKDKFQGGKGGREGREGRDSGDRAPRVFSSSAPRERERVADPN
SPFAKLAALKEQLTANRKD