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2024-05-08 14:39:39

Gene list

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COG category: Replication, recombination and repair
Organism: Chlamydophila caviae GPIC

Number of genes found: 74

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Chlamydophila caviae GPIC
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA CCA00156 hypothetical proteinchromosome CDS163591 3021 + 0.421053
NA CCA00152 conserved hypothetical proteinchromosome CDS160022 708 - 0.387006
NA CCA00027 topoisomerase, subunit B, putativechromosome CDS35604 1809 - 0.36042
NA CCA00970 deoxyribonuclease, TatD familychromosome CDS1129289 801 - 0.409488
NA CCA00316 site-specific recombinase, phage integrase familychromosome CDS367524 939 - 0.382322
NA CCA00413 conserved hypothetical proteinchromosome CDS464066 936 + 0.396368
NA CCA00135 conserved hypothetical protein TIGR00095chromosome CDS142047 570 + 0.382456
NA CCAA00004 virulence plasmid replicative DNA helicase pGP1-DpCpGP1 CDS3733 1377 + 0.338417
NA CCAA00003 virulence plasmid integrase pGP8-DpCpGP1 CDS2622 1008 - 0.355159
NA CCA00489 conserved hypothetical proteinchromosome CDS553157 2778 - 0.37005
NA CCA00852 mutT/Nudix family proteinchromosome CDS974943 450 - 0.388889
NA CCA00351 conserved hypothetical proteinchromosome CDS401993 1752 + 0.403539
NA CCA00239 DNA-3-methyladenine glycosylasechromosome CDS252211 573 - 0.415358
NA CCA00931 helicase, Snf2/Rad54 familychromosome CDS1080395 3618 + 0.386401
NA CCA00509 DNA polymerase III, tau subunit, putativechromosome CDS580419 867 + 0.373702
NA CCA00650 helicase, putative, RecD/TraA familychromosome CDS742283 2208 + 0.380888
NA CCA00618 protein kinase, putativechromosome CDS708041 1857 - 0.403877
NA CCAA00002 virulence plasmid integrase pGP7-DpCpGP1 CDS1638 924 + 0.323593
NA CCA00036 conserved hypothetical proteinchromosome CDS45344 519 + 0.385356
NA CCA00753 conserved hypothetical proteinchromosome CDS863122 1278 - 0.363067
NA CCA00677 serine/threonine-protein kinasechromosome CDS778941 2793 - 0.386681
NA CCA00227 conserved hypothetical proteinchromosome CDS243153 990 + 0.358586
NA CCA00966 conserved hypothetical proteinchromosome CDS1122718 2892 + 0.400069
NA CCA00378 integration host factor beta-subunit, putativechromosome CDS428599 303 + 0.39934
NA CCAA00005 virulence protein pGP2-DpCpGP1 CDS5103 1044 + 0.333333
NA CCA00026 topoisomerase, subunit A, putativechromosome CDS34161 1440 - 0.385417
NA CCA00800 hypothetical proteinchromosome CDS917262 1068 - 0.386704
NA CCA00598 conserved hypothetical protein TIGR00250chromosome CDS678414 492 + 0.408537
ada CCA00145 DNA methyltransferasechromosome CDS153048 528 - 0.399621
dnaA-1 CCA00368 chromosomal replication initiator protein DnaAchromosome CDS419450 1353 - 0.364375
dnaA-2 CCA00473 chromosomal replication initiator protein DnaAchromosome CDS535600 1383 + 0.391179
dnaB CCA00124 replicative DNA helicasechromosome CDS128334 1419 - 0.397463
dnaE CCA00073 DNA polymerase III, alpha subunitchromosome CDS88015 3729 - 0.389917
dnaG CCA00828 DNA primasechromosome CDS951380 1776 - 0.392455
dnaN CCA00445 DNA polymerase III, beta chainchromosome CDS503895 1101 - 0.390554
dnaQ-1 CCA00085 DNA polymerase III, epsilon chainchromosome CDS100477 750 + 0.373333
dnaQ-2 CCA00384 DNA polymerase III, epsilon chainchromosome CDS434630 687 - 0.391557
dnaZ CCA00331 DNA polymerase III, gamma subunitchromosome CDS383557 1341 - 0.395227
gyrA CCA00507 DNA gyrase, subunit Achromosome CDS577301 2493 + 0.401123
gyrB CCA00506 DNA gyrase, subunit Bchromosome CDS574865 2421 + 0.394052
helZ CCA00918 helicase, Snf2 familychromosome CDS1060798 3501 - 0.387889
incA CCA00550 inclusion membrane protein Achromosome CDS622621 1068 - 0.411985
ligA CCA00617 DNA ligasechromosome CDS706045 1989 - 0.415787
mfd CCA00877 transcription-repair coupling factorchromosome CDS1002691 3258 + 0.38674
mutL CCA00951 DNA mismatch repair protein mutLchromosome CDS1102511 1743 - 0.423408
mutS CCA00829 DNA mismatch repair protein MutSchromosome CDS953458 2481 + 0.399839
mutY CCA00392 adenine glycosylasechromosome CDS444619 1110 + 0.392793
nfo CCA00012 endonuclease IVchromosome CDS17659 870 - 0.409195
nth CCA00929 endonuclease IIIchromosome CDS1078324 645 + 0.396899
pcrA CCA00985 ATP-dependent helicase PcrAchromosome CDS1143095 1914 + 0.377743
pkn5 CCA00039 serine/threonine-protein kinasechromosome CDS47847 1506 + 0.384462
polA CCA00128 DNA polymerase Ichromosome CDS133923 2610 + 0.381609
priA CCA00845 primosomal protein N'chromosome CDS966215 2250 + 0.408
recA CCA00995 recA proteinchromosome CDS1155893 1053 + 0.416904
recB CCA00007 exodeoxyribonuclease V, beta subunitchromosome CDS7821 3138 - 0.365519
recC CCA00008 exodeoxyribonuclease V, gamma subunitchromosome CDS10945 3066 - 0.368885
recD CCA01005 exodeoxyribonuclease V, alpha subunitchromosome CDS1165264 1506 - 0.373838
recF CCA00444 recF proteinchromosome CDS502792 1104 - 0.361413
recJ CCA00179 single-stranded-DNA-specific exonuclease RecJchromosome CDS190778 1773 + 0.415116
recR CCA00483 recombination protein RecRchromosome CDS548848 603 - 0.371476
rnhB CCA00654 ribonuclease HIIchromosome CDS747070 639 - 0.395931
rnhC CCA00293 ribonuclease HIIIchromosome CDS341067 903 - 0.400886
ruvA CCA00120 Holliday junction DNA helicase RuvAchromosome CDS124286 624 + 0.383013
ruvB CCA00406 Holliday junction DNA helicase RuvBchromosome CDS456177 1014 + 0.406312
ruvC CCA00119 crossover junction endodeoxyribonuclease RuvCchromosome CDS123780 507 + 0.38856
ssb CCA00410 single-strand binding proteinchromosome CDS461294 486 + 0.397119
topA CCA00988 DNA topoisomerase Ichromosome CDS1147744 2586 + 0.404099
ung CCA00984 uracil-DNA glycosylasechromosome CDS1142295 690 - 0.424638
uvrA CCA00676 excinuclease ABC, subunit Achromosome CDS773526 5421 + 0.400111
uvrB CCA00962 excinuclease ABC, subunit Bchromosome CDS1114741 1971 + 0.397768
uvrC CCA00830 excinuclease ABC, subunit Cchromosome CDS955942 1818 + 0.383938
xerD CCA00737 integrase/recombinase XerDchromosome CDS843715 897 + 0.437012
xseA CCA00307 exodeoxyribonuclease, large subunitchromosome CDS357433 1668 - 0.401679
xseB CCA00306 exodeoxyribonuclease VII, small subunitchromosome CDS357202 228 - 0.381579