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2024-05-02 15:18:34

Gene list

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COG category: Replication, recombination and repair
Organism: Jannaschia sp. CCS1, CCS1

Number of genes found: 161

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Jannaschia sp. CCS1, CCS1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Jann_1574 DEAD/DEAH box helicase-likechromosome CDS1552377 2121 - 0.668553
NA Jann_3727 transposase IS3/IS911chromosome CDS3811405 195 + 0.564103
NA Jann_3876 DNA polymerase III, subunits gamma and tauchromosome CDS3974827 1755 + 0.638746
NA Jann_0132 Exonucleasechromosome CDS121202 591 + 0.593909
NA Jann_1611 serine/threonine protein kinasechromosome CDS1595288 3597 - 0.681957
NA Jann_2777 UvrD/REP helicasechromosome CDS2791975 2454 - 0.616952
NA Jann_3995 DNA-directed DNA polymerasechromosome CDS4099107 1254 + 0.64992
NA Jann_1989 Deoxyribodipyrimidine photolyasechromosome CDS1987997 1407 + 0.638948
NA Jann_0441 conserved hypothetical protein 95chromosome CDS445028 558 + 0.654122
NA Jann_0443 ATP-dependent DNA helicase RecQchromosome CDS446342 2058 + 0.630224
NA Jann_1152 hypothetical proteinchromosome CDS1114393 495 - 0.680808
NA Jann_3003 ISPsy22, transposase truncatedchromosome CDS3024317 447 + 0.545861
NA Jann_3652 Uracil-DNA glycosylase superfamilychromosome CDS3726126 585 - 0.647863
NA Jann_4066 UvrD/REP helicasechromosome CDS4172687 3363 + 0.656259
NA Jann_2747 DNA repair protein RecNchromosome CDS2761608 1650 - 0.648485
NA Jann_0678 hypothetical proteinchromosome CDS650930 846 + 0.656028
NA Jann_0391 Ribonuclease Hchromosome CDS394195 600 + 0.638333
NA Jann_3728 Integrase proteinchromosome CDS3811707 714 + 0.607843
NA Jann_1297 Antirestriction protein-likechromosome CDS1256601 279 - 0.594982
NA Jann_2667 ATP dependent DNA ligasechromosome CDS2677458 1599 + 0.624765
NA Jann_1546 phage integrasechromosome CDS1516603 1164 - 0.609107
NA Jann_0063 hypothetical proteinchromosome CDS58842 714 + 0.670868
NA Jann_3714 nuclease (SNase-like)chromosome CDS3798880 471 - 0.509554
NA Jann_1558 DNA polymerase III, alpha subunitchromosome CDS1530741 3294 - 0.594718
NA Jann_1723 excinuclease ABC, A subunitchromosome CDS1711211 2874 + 0.621434
NA Jann_4141 serine/threonine protein kinasechromosome CDS4251266 1341 + 0.574944
NA Jann_3639 conserved hypothetical proteinchromosome CDS3713001 435 - 0.6
NA Jann_0791 nuclease (SNase-like)chromosome CDS751819 510 - 0.590196
NA Jann_0392 DNA methylase N-4/N-6chromosome CDS394900 1104 + 0.610507
NA Jann_3222 transposase IS3/IS911chromosome CDS3268840 195 + 0.564103
NA Jann_3526 Integrase proteinchromosome CDS3584318 714 - 0.607843
NA Jann_1668 transcriptional regulator, AraC familychromosome CDS1652247 804 - 0.689055
NA Jann_0336 histone-like DNA-binding proteinchromosome CDS341049 291 - 0.62543
NA Jann_0232 virulence-associated protein Echromosome CDS226403 879 + 0.614334
NA Jann_0580 nuclease (SNase-like)chromosome CDS570095 507 + 0.548323
NA Jann_0003 DNA replication and repair protein RecFchromosome CDS2749 1128 + 0.644504
NA Jann_1293 Transposase and inactivated derivatives-likechromosome CDS1253862 735 - 0.565986
NA Jann_0072 NUDIX hydrolasechromosome CDS66479 444 - 0.619369
NA Jann_1992 Nucleoside diphosphate pyrophosphatasechromosome CDS1991211 1128 + 0.650709
NA Jann_0001 chromosomal replication initiator protein DnaAchromosome CDS48 1428 + 0.585434
NA Jann_0621 AAA ATPase proteinchromosome CDS594204 1311 + 0.637681
NA Jann_3223 Integrase proteinchromosome CDS3269142 714 + 0.607843
NA Jann_4047 DNA mismatch repair protein MutLchromosome CDS4150797 1833 + 0.656301
NA Jann_1701 hypothetical proteinchromosome CDS1684961 852 + 0.700704
NA Jann_2006 transposase IS116/IS110/IS902chromosome CDS2012478 996 + 0.553213
NA Jann_3399 hypothetical proteinchromosome CDS3451079 447 - 0.675615
NA Jann_3272 NUDIX hydrolasechromosome CDS3326455 492 - 0.656504
NA Jann_3919 excinuclease ABC, C subunitchromosome CDS4014964 1896 - 0.625
NA Jann_0553 DNA topoisomerase IV, A subunitchromosome CDS540378 2328 + 0.623282
NA Jann_1167 conserved hypothetical proteinchromosome CDS1132229 237 + 0.518987
NA Jann_2624 Integrase proteinchromosome CDS2641907 714 + 0.607843
NA Jann_3214 ISPsy22, transposase truncatedchromosome CDS3258721 318 + 0.54717
NA Jann_2004 hypothetical proteinchromosome CDS2007963 3501 + 0.46958
NA Jann_1669 endonuclease IIIchromosome CDS1653195 723 + 0.607192
NA Jann_0502 ribonuclease Hchromosome CDS499515 474 - 0.618143
NA Jann_0548 hypothetical proteinchromosome CDS536888 870 + 0.625287
NA Jann_0395 A/G-specific adenine glycosylasechromosome CDS398123 1038 - 0.640655
NA Jann_1683 DNA polymerase Ichromosome CDS1665993 2790 + 0.623656
NA Jann_2181 Holliday junction resolvase YqgFchromosome CDS2187530 438 - 0.643836
NA Jann_0002 DNA polymerase III, beta subunitchromosome CDS1603 1119 + 0.609473
NA Jann_2815 exodeoxyribonuclease IIIchromosome CDS2829772 786 + 0.633588
NA Jann_4075 conserved hypothetical proteinchromosome CDS4182606 342 + 0.55848
NA Jann_3137 NUDIX hydrolasechromosome CDS3176139 669 + 0.668161
NA Jann_0018 putative RNA methylasechromosome CDS16714 1113 - 0.662174
NA Jann_2623 transposase IS3/IS911chromosome CDS2641605 195 + 0.564103
NA Jann_3188 conserved hypothetical proteinchromosome CDS3230247 684 + 0.640351
NA Jann_1997 phage integrasechromosome CDS1997294 1269 + 0.609141
NA Jann_3470 methylated-DNA--protein-cysteinemethyltransferasechromosome CDS3522994 456 + 0.638158
NA Jann_1873 Deoxyribodipyrimidine photolyasechromosome CDS1861653 1554 + 0.687902
NA Jann_0213 2OG-Fe(II) oxygenasechromosome CDS208414 651 + 0.612903
NA Jann_2573 metallophosphoesterasechromosome CDS2582044 1092 - 0.660256
NA Jann_2068 Uracil-DNA glycosylase superfamilychromosome CDS2077362 1398 + 0.654506
NA Jann_3231 phage integrasechromosome CDS3277995 1089 - 0.606979
NA Jann_1964 HhH-GPDchromosome CDS1957806 678 + 0.669617
NA Jann_0527 DNA repair protein RecOchromosome CDS517438 735 + 0.673469
NA Jann_0964 crossover junction endodeoxyribonuclease RuvCchromosome CDS921748 576 + 0.654514
NA Jann_0720 DNA repair protein RadCchromosome CDS689582 822 - 0.620438
NA Jann_0965 Holliday junction DNA helicase RuvAchromosome CDS922320 672 + 0.669643
NA Jann_2225 conserved hypothetical proteinchromosome CDS2230573 1131 + 0.64191
NA Jann_1033 primosomal protein N'chromosome CDS984955 2199 + 0.654843
NA Jann_0974 hypothetical proteinchromosome CDS929424 1302 + 0.687404
NA Jann_2618 hypothetical proteinchromosome CDS2638218 216 + 0.625
NA Jann_3300 exodeoxyribonuclease VII, large subunitchromosome CDS3353712 1560 - 0.674359
NA Jann_0940 DNA polymerase III, alpha subunitchromosome CDS895863 3468 + 0.616205
NA Jann_2896 Resolvase-likechromosome CDS2914396 621 - 0.661836
NA Jann_2319 NUDIX hydrolasechromosome CDS2323019 444 + 0.536036
NA Jann_4065 conserved hypothetical proteinchromosome CDS4169734 2961 + 0.669706
NA Jann_3868 NUDIX hydrolasechromosome CDS3967223 984 + 0.629065
NA Jann_2858 DNA-cytosine methyltransferasechromosome CDS2877976 1509 + 0.597084
NA Jann_3002 single-stranded-DNA-specific exonuclease RecJchromosome CDS3021889 1749 + 0.656947
NA Jann_0194 DNA polymerase III, epsilon subunitchromosome CDS185734 696 - 0.54023
NA Jann_0080 NUDIX hydrolasechromosome CDS74251 588 + 0.658163
NA Jann_3216 transposase IS116/IS110/IS902chromosome CDS3259545 1158 + 0.572539
NA Jann_3213 Antirestriction protein-likechromosome CDS3257164 978 - 0.591002
NA Jann_1072 replicative DNA helicasechromosome CDS1033755 714 + 0.571429
NA Jann_3901 phage SPO1 DNA polymerase-related proteinchromosome CDS3999663 903 - 0.645626
NA Jann_1298 Antirestriction protein-likechromosome CDS1256864 600 - 0.585
NA Jann_3158 DNA processing protein DprA, putativechromosome CDS3197746 1209 + 0.687345
NA Jann_0900 protein of unknown function UPF0102chromosome CDS856615 303 + 0.640264
NA Jann_1057 Chromosomal replication initiator, DnaAchromosome CDS1010752 702 + 0.659544
NA Jann_0847 ATPasechromosome CDS801914 1548 - 0.647933
NA Jann_0292 mutator mutT proteinchromosome CDS300162 387 + 0.617571
NA Jann_1612 serine/threonine protein kinasechromosome CDS1598984 2127 - 0.67654
NA Jann_1030 phage integrasechromosome CDS982398 924 - 0.678571
NA Jann_3160 DNA topoisomerasechromosome CDS3199506 2724 + 0.616006
NA Jann_1740 replicative DNA helicasechromosome CDS1732179 1506 - 0.622842
NA Jann_2857 DNA mismatch endonuclease vsrchromosome CDS2877430 471 - 0.564756
NA Jann_1157 transposase IS116/IS110/IS902chromosome CDS1120332 996 - 0.553213
NA Jann_3311 helicase-likechromosome CDS3364359 2937 - 0.660878
NA Jann_2889 DNA-cytosine methyltransferasechromosome CDS2909075 1122 + 0.651515
NA Jann_0115 DEAD/DEAH box helicase-likechromosome CDS105076 1356 + 0.64528
NA Jann_0421 exodeoxyribonuclease IIIchromosome CDS424521 789 + 0.6109
NA Jann_0382 NUDIX hydrolasechromosome CDS388371 462 + 0.603896
NA Jann_2549 Radical SAMchromosome CDS2551914 1089 - 0.647383
NA Jann_0286 DNA repair protein RadCchromosome CDS291578 774 + 0.617571
NA Jann_1177 conserved hypothetical proteinchromosome CDS1140918 753 + 0.674635
NA Jann_3458 ATP-dependent helicase HrpBchromosome CDS3504069 2397 + 0.693367
NA Jann_2516 hypothetical proteinchromosome CDS2514447 510 - 0.623529
NA Jann_2504 DNA ligase, NAD-dependentchromosome CDS2503013 2259 - 0.641434
NA Jann_1276 DNA-directed DNA polymerasechromosome CDS1236375 1125 - 0.672889
NA Jann_0004 DNA gyrase, B subunitchromosome CDS3950 2418 + 0.605045
NA Jann_3227 conjugal transfer protein traAchromosome CDS3275066 804 - 0.63806
NA Jann_2809 DNA photolyase-like proteinchromosome CDS2823462 1212 + 0.607261
NA Jann_1783 integration host factor, alpha subunitchromosome CDS1771684 303 - 0.607261
NA Jann_3521 phage integrasechromosome CDS3578679 1269 + 0.619385
NA Jann_4210 formamidopyrimidine-DNA glycosylasechromosome CDS4315345 852 + 0.606808
NA Jann_1536 phage integrasechromosome CDS1507236 606 + 0.612211
NA Jann_3011 hypothetical proteinchromosome CDS3029685 462 - 0.577922
NA Jann_1986 recA proteinchromosome CDS1983710 1074 + 0.591248
NA Jann_2786 OmpA/MotBchromosome CDS2803977 1446 - 0.650761
NA Jann_3602 excinuclease ABC, B subunitchromosome CDS3678087 2196 + 0.612022
NA Jann_1205 conserved hypothetical proteinchromosome CDS1166200 369 + 0.590786
NA Jann_3732 transposase IS116/IS110/IS902chromosome CDS3814713 996 + 0.553213
NA Jann_1200 DEAD/DEAH box helicase-likechromosome CDS1160864 1935 - 0.648062
NA Jann_0107 conserved hypothetical proteinchromosome CDS97999 405 - 0.624691
NA Jann_1885 single-strand binding proteinchromosome CDS1876031 531 - 0.642185
NA Jann_0853 hypothetical proteinchromosome CDS808630 636 + 0.605346
NA Jann_2484 phage integrasechromosome CDS2480121 915 - 0.674317
NA Jann_2322 transcription-repair coupling factorchromosome CDS2325459 3462 - 0.639804
NA Jann_2865 phage integrasechromosome CDS2887731 1113 + 0.682839
NA Jann_0966 Holliday junction DNA helicase RuvBchromosome CDS923056 1035 + 0.639614
NA Jann_3878 recombination protein RecRchromosome CDS3977057 600 + 0.635
NA Jann_0209 DNA mismatch repair protein MutSchromosome CDS199959 2634 - 0.603645
NA Jann_1816 DNA polymerase III chi subunit, HolCchromosome CDS1806791 465 + 0.649462
NA Jann_1925 DNA topoisomerase IV, B subunitchromosome CDS1912371 1962 - 0.634047
NA Jann_0090 exodeoxyribonuclease VII, small subunitchromosome CDS85639 243 - 0.600823
NA Jann_2503 DEAD/DEAH box helicase-likechromosome CDS2500918 2103 - 0.650024
NA Jann_0495 DNA-3-methyladenine glycosylase Ichromosome CDS493791 588 + 0.62415
NA Jann_1543 MobA/MobL proteinchromosome CDS1512771 3003 - 0.645355
NA Jann_2900 phage integrasechromosome CDS2918945 1176 - 0.672619
NA Jann_0833 hypothetical proteinchromosome CDS789602 561 + 0.664884
NA Jann_3449 DNA primasechromosome CDS3495842 1941 + 0.657393
NA Jann_3527 transposase IS3/IS911chromosome CDS3585139 195 - 0.564103
NA Jann_0229 phage integrasechromosome CDS223268 1206 + 0.568823
NA Jann_2494 DNA gyrase, A subunitchromosome CDS2492711 2760 + 0.625362
NA Jann_1275 TatD-related deoxyribonucleasechromosome CDS1235564 804 - 0.63806
NA Jann_1292 transposase, IS4chromosome CDS1253243 630 - 0.555556
NA Jann_3585 integration host factor, beta subunitchromosome CDS3664377 288 + 0.552083
NA Jann_0278 putative DNA topoisomerase I proteinchromosome CDS284199 972 - 0.638889
NA Jann_0240 nuclease (SNase-like)chromosome CDS234842 483 - 0.571429
NA Jann_1559 conserved hypothetical proteinchromosome CDS1534062 1434 - 0.62622