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2024-05-05 23:57:44

Gene list

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COG category: Replication, recombination and repair
Organism: Staphylococcus aureus subsp. aureus USA300, USA300; FPR3757

Number of genes found: 145

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Staphylococcus aureus subsp. aureus USA300, USA300; FPR3757
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SAUSA300_1961 phiPVL ORF41-like proteinchromosome CDS2117652 1956 - 0.303681
NA SAUSA300_1960 putative phage-related DNA recombination proteinchromosome CDS2116730 921 - 0.336591
NA SAUSA300_0383 conserved hypothetical proteinchromosome CDS433673 957 - 0.37722
NA SAUSA300_0734 putative comf operon protein 1chromosome CDS814619 1083 + 0.323176
NA SAUSA300_1259 ImpB/MucB/SamB family proteinchromosome CDS1386229 1263 + 0.338084
NA SAUSA300_1732 putative transposasechromosome CDS1917170 402 - 0.288557
NA SAUSA300_1875 exonucleasechromosome CDS2035251 555 + 0.317117
NA SAUSA300_1684 conserved hypothetical proteinchromosome CDS1856424 1200 - 0.3275
NA SAUSA300_1344 putative DNA replication protein DnaDchromosome CDS1508674 687 - 0.307132
NA SAUSA300_0468 hydrolase, TatD familychromosome CDS527793 774 + 0.365633
NA SAUSA300_1346 putative DnaQ family exonuclease/DinG family helicasechromosome CDS1511302 2694 - 0.301039
NA SAUSA300_2636 integrase/recombinasechromosome CDS2862348 537 + 0.346369
NA SAUSA300_1608 DNA repair protein RadCchromosome CDS1759529 657 - 0.327245
NA SAUSA300_1023 conserved hypothetical proteinchromosome CDS1119033 543 + 0.314917
NA SAUSA300_1479 conserved hypothetical proteinchromosome CDS1632483 591 - 0.269036
NA SAUSA300_1958 Single-strand binding proteinchromosome CDS2115561 471 - 0.354565
NA SAUSA300_2101 SAP domain proteinchromosome CDS2266034 1137 - 0.258575
NA SAUSA300_2426 conserved hypothetical proteinchromosome CDS2611201 327 - 0.287462
NA SAUSA300_1584 ATPase, AAA familychromosome CDS1733535 1176 + 0.362245
NA SAUSA300_2431 putative helicasechromosome CDS2614823 2862 - 0.280573
NA SAUSA300_1549 ComE operon protein 1chromosome CDS1700989 687 - 0.299854
NA SAUSA300_1326 putative cell wall enzyme EbsBchromosome CDS1456351 402 + 0.325871
NA SAUSA300_0041 conserved hypothetical proteinchromosome CDS51299 1092 + 0.25641
NA SAUSA300_1573 conserved hypothetical protein TIGR00250chromosome CDS1721301 429 - 0.328671
NA SAUSA300_2263 putative transposasechromosome CDS2431859 315 + 0.279365
NA SAUSA300_0724 putative lipoproteinchromosome CDS804192 879 + 0.274175
NA SAUSA300_0034 IS1272, transposasechromosome CDS42442 1512 - 0.28373
NA SAUSA300_2305 transposase, truncationchromosome CDS2478538 357 + 0.271709
NA SAUSA300_0097 conserved hypothetical proteinchromosome CDS105097 3153 + 0.313035
NA SAUSA300_1970 putative exonucleasechromosome CDS2123965 933 + 0.264737
NA SAUSA300_0060 putative transposasechromosome CDS67966 825 + 0.306667
NA SAUSA300_1868 conserved hypothetical proteinchromosome CDS2027962 387 - 0.260982
NA SAUSA300_1631 replication initiation and membrane attachment proteinchromosome CDS1785823 1401 - 0.328337
NA SAUSA300_2212 conserved hypothetical proteinchromosome CDS2379451 165 + 0.327273
NA SAUSA300_0469 primase-related proteinchromosome CDS528733 537 + 0.348231
NA SAUSA300_0267 transposasechromosome CDS318970 405 + 0.303704
NA SAUSA300_2001 DNA mismatch repair protein-like proteinchromosome CDS2160091 1611 + 0.30478
NA SAUSA300_0585 conserved hypothetical proteinchromosome CDS659564 630 + 0.269841
NA SAUSA300_2290 putative 3-methyladenine DNA glycosylasechromosome CDS2462401 609 + 0.380952
NA SAUSA300_1771 conserved hypothetical proteinchromosome CDS1958590 642 + 0.258567
NA SAUSA300_1309 transposase, IS200 familychromosome CDS1443183 486 + 0.294239
NA SAUSA300_2432 hydrolase, MutT/nudix familychromosome CDS2617686 393 - 0.315522
NA SAUSA300_2581 putative surface anchored proteinchromosome CDS2798561 1908 - 0.321279
NA SAUSA300_1378 conserved hypothetical proteinchromosome CDS1543733 879 - 0.301479
NA SAUSA300_1853 conserved hypothetical proteinchromosome CDS2016041 315 - 0.304762
NA SAUSA300_1981 phage terminase family proteinchromosome CDS2138333 591 - 0.34687
NA SAUSA300_1576 helicase, RecD/TraA familychromosome CDS1725029 2478 - 0.327684
NA SAUSA300_1339 conserved hypothetical proteinchromosome CDS1503417 351 - 0.290598
NA SAUSA300_1449 MutT/nudix family proteinchromosome CDS1601926 543 - 0.3186
NA SAUSA300_1748 chromosome pseudo1928771 144 - 0.319444
NA SAUSA300_1734 conserved hypothetical proteinchromosome CDS1918781 480 - 0.35
NA SAUSA300_1408 phage helicasechromosome CDS1573108 1272 - 0.326258
NA SAUSA300_1876 DNA polymerase IVchromosome CDS2035873 1041 - 0.345821
NA SAUSA300_1957 phiPVL ORF046-like proteinchromosome CDS2114638 894 - 0.33557
NA SAUSA300_0028 putative transposasechromosome CDS35877 675 - 0.343704
NA SAUSA300_0284 conserved hypothetical proteinchromosome CDS340437 393 + 0.310433
NA SAUSA300_0597 putative endonuclease IIIchromosome CDS671221 636 + 0.27673
NA SAUSA300_0071 ISSep1-like transposasechromosome CDS78432 1014 + 0.333333
NA SAUSA300_1955 putative endodeoxyribonuclease RusAchromosome CDS2114000 405 - 0.318519
NA SAUSA300_1336 conserved hypothetical proteinchromosome CDS1500707 1146 - 0.357766
NA SAUSA300_1438 phiSLT ORF401-like protein, integrasechromosome CDS1590733 1206 + 0.297678
NA SAUSA300_2485 methylated DNA-protein cysteine methyltransferasechromosome CDS2684265 522 - 0.404215
NA SAUSA300_1658 conserved hypothetical proteinchromosome CDS1823625 948 - 0.31962
NA SAUSA300_1518 ATP-dependent RNA helicase, DEAD/DEAH box familychromosome CDS1667925 1347 - 0.326652
NA SAUSA300_2037 ATP-dependent RNA helicasechromosome CDS2201245 1521 - 0.364234
NA SAUSA300_0294 conserved hypothetical proteinchromosome CDS347212 441 + 0.290249
NA SAUSA300_2510 conserved hypothetical proteinchromosome CDS2715596 501 + 0.353293
NA SAUSA300_0465 conserved hypothetical proteinchromosome CDS524414 249 + 0.337349
NA SAUSA300_0677 putative deoxyribodipyrimidine photolyasechromosome CDS751174 1374 + 0.339156
NA SAUSA300_1487 replication initiation factor family proteinchromosome CDS1641686 1092 - 0.32967
NA SAUSA300_0794 Toprim domain proteinchromosome CDS878376 387 + 0.30491
NA SAUSA300_1793 conserved hypothetical proteinchromosome CDS1976504 1197 - 0.299081
NA SAUSA300_1332 putative 5'-3' exonucleasechromosome CDS1494103 879 - 0.32537
NA SAUSA300_0420 conserved hypothetical proteinchromosome CDS472142 1329 + 0.303236
NA SAUSA300_2052 single-stranded DNA-binding protein familychromosome CDS2216832 348 - 0.318966
NA SAUSA300_0039 conserved hypothetical proteinchromosome CDS49125 1788 - 0.345078
NA SAUSA300_0440 MutT/nudix family proteinchromosome CDS493286 396 + 0.34596
NA SAUSA300_0609 phage integrase family proteinchromosome CDS681555 561 + 0.301248
NA SAUSA300_1810 IS1181, transposasechromosome CDS1993601 1356 + 0.317847
NA SAUSA300_1517 endonuclease IVchromosome CDS1667025 891 - 0.332211
NA SAUSA300_1950 conserved hypothetical phage proteinchromosome CDS2112532 243 - 0.292181
ccrA SAUSA300_0038 cassette chromosome recombinase Achromosome CDS47542 1350 - 0.345926
ccrB SAUSA300_0037 cassette chromosome recombinase Bchromosome CDS45892 1629 - 0.349908
dnaA SAUSA300_0001 chromosomal replication initiator protein DnaAchromosome CDS544 1362 + 0.328928
dnaB SAUSA300_0016 replicative DNA helicasechromosome CDS20787 1401 + 0.383298
dnaE SAUSA300_1649 DNA polymerase III, alpha subunitchromosome CDS1811454 3198 - 0.315822
dnaG SAUSA300_1522 DNA primasechromosome CDS1672626 1800 - 0.316111
dnaI SAUSA300_1630 primosomal protein DnaIchromosome CDS1784903 921 - 0.343105
dnaN SAUSA300_0002 DNA polymerase III, beta subunitchromosome CDS2183 1134 + 0.328042
dnaX SAUSA300_0452 DNA polymerase III, gamma and tau subunitschromosome CDS509354 1674 + 0.362007
dprA SAUSA300_1142 DNA protecting protein DprAchromosome CDS1251718 873 + 0.30126
gyrA SAUSA300_0006 DNA gyrase, A subunitchromosome CDS7032 2664 + 0.368619
gyrB SAUSA300_0005 DNA gyrase, B subunitchromosome CDS5061 1935 + 0.370026
holA SAUSA300_1546 DNA polymerase III, delta subunitchromosome CDS1697199 975 - 0.268718
holB SAUSA300_0461 DNA polymerase III delta subunitchromosome CDS521328 927 + 0.305286
hup SAUSA300_1362 DNA-binding protein HUchromosome CDS1528982 273 - 0.3663
int SAUSA300_0799 integrasechromosome CDS881996 1221 - 0.318591
int SAUSA300_1972 integrasechromosome CDS2126612 1038 + 0.306358
ligA SAUSA300_1885 DNA ligasechromosome CDS2047455 2004 - 0.340818
mfd SAUSA300_0481 transcription-repair coupling factorchromosome CDS537797 3507 + 0.342458
mutL SAUSA300_1189 DNA mismatch repair protein mutLchromosome CDS1309282 2010 + 0.31393
mutM SAUSA300_1635 formamidopyrimidine-DNA glycosylasechromosome CDS1789738 873 - 0.320733
mutS SAUSA300_1188 DNA mismatch repair protein mutSchromosome CDS1306747 2523 + 0.323028
mutS2 SAUSA300_1043 DNA mismatch repair MutS2 proteinchromosome CDS1139529 2349 + 0.330353
mutY SAUSA300_1849 A/G-specific adenine glycosylasechromosome CDS2011237 1038 - 0.340077
nth SAUSA300_1343 endonuclease IIIchromosome CDS1508025 660 - 0.343939
nuc SAUSA300_0776 thermonuclease precursorchromosome CDS866215 687 + 0.340611
nuc SAUSA300_1222 thermonucleasechromosome CDS1339327 534 + 0.318352
parC SAUSA300_1251 DNA topoisomerase IV, subunit Achromosome CDS1374167 2403 + 0.321265
parE SAUSA300_1250 DNA topoisomerase IV, subunit Bchromosome CDS1372170 1998 + 0.349349
pcrA SAUSA300_1886 ATP-dependent DNA helicase, PcrAchromosome CDS2049462 2193 - 0.341541
polA SAUSA300_1423 phage related DNA polymerase, family Achromosome CDS1581398 1953 - 0.351767
polA SAUSA300_1636 DNA polymerase I superfamilychromosome CDS1790626 2631 - 0.322311
polC SAUSA300_1157 DNA polymerase III, alpha subunitchromosome CDS1269495 4311 + 0.347483
priA SAUSA300_1105 primosomal protein N`chromosome CDS1209053 2409 + 0.347862
recA SAUSA300_1178 recombinase A proteinchromosome CDS1296268 969 + 0.372549
recF SAUSA300_0004 DNA replication and repair protein recFchromosome CDS3939 1113 + 0.337826
recG SAUSA300_1120 ATP-dependent DNA helicase RecGchromosome CDS1225776 2061 + 0.335759
recJ SAUSA300_1592 single-stranded-DNA-specific exonuclease RecJchromosome CDS1744103 2274 - 0.323659
recN SAUSA300_1468 DNA repair protein RecNchromosome CDS1622927 1680 - 0.306548
recO SAUSA300_1526 DNA repair protein RecOchromosome CDS1677814 753 - 0.326693
recQ SAUSA300_1371 ATP-dependent DNA helicase RecQchromosome CDS1538679 1380 - 0.336957
recQ SAUSA300_0705 ATP-dependent DNA helicase RecQchromosome CDS781251 1782 + 0.319865
recR SAUSA300_0454 recombination protein RecRchromosome CDS511441 597 + 0.363484
rexA SAUSA300_0870 exonuclease RexAchromosome CDS951985 3654 + 0.334702
rexB SAUSA300_0869 exonuclease RexBchromosome CDS948508 3477 + 0.32298
rnhB SAUSA300_1137 ribonuclease HIIchromosome CDS1245956 768 + 0.351562
rnhC SAUSA300_1039 ribonuclease HIIIchromosome CDS1135638 939 - 0.334398
ruvA SAUSA300_1598 holliday junction DNA helicase RuvAchromosome CDS1752637 603 - 0.331675
ruvB SAUSA300_1597 holliday junction DNA helicase RuvBchromosome CDS1751601 1005 - 0.372139
sbcC SAUSA300_1243 exonuclease SbcCchromosome CDS1360927 3030 + 0.284158
sbcD SAUSA300_1242 exonuclease SbcDchromosome CDS1359802 1122 + 0.306595
ssb SAUSA300_0367 single-strand binding proteinchromosome CDS419090 504 + 0.382937
tag SAUSA300_1612 DNA-3-methyladenine glycosidasechromosome CDS1765506 561 + 0.333333
tnp SAUSA300_2115 IS1181, transposasechromosome CDS2290382 1239 + 0.313156
topA SAUSA300_1143 DNA topoisomerase Ichromosome CDS1252764 2076 + 0.350674
topB SAUSA300_2208 DNA topoisomerase IIIchromosome CDS2373738 2136 - 0.330993
ung SAUSA300_0563 uracil-DNA glycosylasechromosome CDS638296 657 + 0.354642
uvrA SAUSA300_0742 excinuclease ABC, A subunitchromosome CDS825938 2847 + 0.354057
uvrB SAUSA300_0741 excinuclease ABC, B subunitchromosome CDS823945 1986 + 0.350453
uvrC SAUSA300_1045 excinuclease ABC, C subunitchromosome CDS1142757 1713 + 0.33275
xerC SAUSA300_1145 tyrosine recombinase xerCchromosome CDS1256719 897 + 0.32553
xerD SAUSA300_1447 tyrosine recombinase XerDchromosome CDS1600436 888 - 0.333333
xseA SAUSA300_1472 exodeoxyribonuclease VII, large subunitchromosome CDS1626588 1338 - 0.311659
xseB SAUSA300_1471 exodeoxyribonuclease VII, small subunitchromosome CDS1626365 231 - 0.30303