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2024-05-05 23:57:42

Gene list

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COG category: Replication, recombination and repair
Organism: Porphyromonas gingivalis W83, W83

Number of genes found: 166

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Porphyromonas gingivalis W83, W83
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PG1113 integrasechromosome CDS1185613 1224 - 0.535131
NA PG0460 ISPg1, transposasechromosome CDS502077 1086 + 0.486188
NA PG0384 MutS2 family proteinchromosome CDS416235 2523 + 0.520412
NA PG1205 DNA-binding protein, histone-like familychromosome CDS1284093 471 + 0.456476
NA PG2176 ISPg2, transposasechromosome CDS2283305 1131 - 0.418214
NA PG0222 DNA-binding protein, histone-like familychromosome CDS256003 468 - 0.549145
NA PG1533 Toprim domain proteinchromosome CDS1611803 2049 - 0.43143
NA PG0277 ISPg2, transposasechromosome CDS308996 1131 + 0.418214
NA PG0128 conserved domain proteinchromosome CDS149734 975 + 0.565128
NA PG1281 hypothetical proteinchromosome CDS1358988 1164 + 0.456186
NA PG1710 ISPg5, transposase Orf2chromosome CDS1795497 939 + 0.500533
NA PG0943 ISPg5, transposase Orf2chromosome CDS1002652 939 + 0.500533
NA PG2009 DNA repair protein RecO, putativechromosome CDS2098454 738 + 0.445799
NA PG1389 DNA-binding protein, histone-like familychromosome CDS1470960 459 - 0.538126
NA PG1261 ISPg4, transposasechromosome CDS1338511 1158 + 0.454231
NA PG1420 ISPg5, transposase Orf2chromosome CDS1505586 939 + 0.500533
NA PG1061 ISPg6, transposasechromosome CDS1128820 1089 - 0.431589
NA PG0177 ISPg4, transposasechromosome CDS199227 1158 + 0.457686
NA PG0184 ISPg1, transposasechromosome CDS216542 1086 + 0.481584
NA PG2072 UvrD/REP helicase domain proteinchromosome CDS2167509 3309 + 0.510124
NA PG1983 CRISPR-associated protein, TM1791 familychromosome CDS2072771 762 - 0.430446
NA PG0194 ISPg3, transposasechromosome CDS231068 903 + 0.410853
NA PG0841 mobilizable transposon, excision protein, putativechromosome CDS902871 894 - 0.505593
NA PG0459 ISPg5, transposase Orf1chromosome CDS501607 378 - 0.47619
NA PG2057 ISPg5, transposase Orf2chromosome CDS2155099 939 - 0.504792
NA PG0864 site-specific recombinase, resolvase familychromosome CDS927139 621 - 0.465378
NA PG1072 MutS family proteinchromosome CDS1139116 1392 + 0.438218
NA PG0798 ISPg3, transposasechromosome CDS852985 903 + 0.408638
NA PG0050 ISPg4, transposasechromosome CDS61056 1158 + 0.453368
NA PG0932 DNA polymerase III, delta prime subunit, putativechromosome CDS988643 1251 + 0.529976
NA PG1433 hydrolasechromosome CDS1518971 216 + 0.490741
NA PG1454 integrasechromosome CDS1536967 1230 - 0.472358
NA PG1388 hypothetical proteinchromosome CDS1470185 795 - 0.539623
NA PG0062 TPR domain proteinchromosome CDS73828 2043 + 0.530103
NA PG1624 ISPg1, transposasechromosome CDS1706278 1086 - 0.481584
NA PG0566 DNA-binding protein, histone-like familychromosome CDS623025 507 - 0.540434
NA PG1448 ISPg1, transposasechromosome CDS1532424 1086 + 0.481584
NA PG1985 CRISPR-associated protein, TM1792 familychromosome CDS2073969 702 - 0.42735
NA PG1480 conjugative transposon protein TraIchromosome CDS1555356 630 - 0.5
NA PG1230 hypothetical proteinchromosome CDS1306050 2109 - 0.524893
NA PG0008 ISPg5 transposase Orf2chromosome CDS7175 939 - 0.497338
NA PG0908 G/U mismatch-specific DNA glycosylase, putativechromosome CDS971320 492 - 0.487805
NA PG0261 ISPg3, transposasechromosome CDS293952 903 - 0.409745
NA PG0426 ISPg5, transposase Orf2chromosome CDS464250 939 - 0.502662
NA PG1103 ATPase, AAA familychromosome CDS1173745 1305 + 0.533333
NA PG0783 hydrolase, putativechromosome CDS834968 828 - 0.460145
NA PG1697 type II restriction endonuclease, putativechromosome CDS1781160 3975 + 0.485031
NA PG0574 hypothetical proteinchromosome CDS629158 474 + 0.487342
NA PG0517 hypothetical proteinchromosome CDS559305 2883 - 0.468956
NA PG0368 DNA topoisomerase IV, B subunit, putativechromosome CDS401385 1935 + 0.517313
NA PG0458 ISPg5, transposase Orf2chromosome CDS500615 939 - 0.502662
NA PG1031 ISPg1, transposasechromosome CDS1093171 1086 - 0.481584
NA PG2047 helicase, putativechromosome CDS2145848 2286 - 0.51706
NA PG1000 hypothetical proteinchromosome CDS1057734 633 + 0.472354
NA PG2099 ATP-dependent RNA helicase, DEAD/DEAH box familychromosome CDS2206739 1284 - 0.560748
NA PG0861 helicase, SNF2/RAD54 familychromosome CDS919387 3483 + 0.479759
NA PG0865 ISPg2, transposasechromosome CDS927856 1131 - 0.418214
NA PG1658 ISPg4, transposasechromosome CDS1741837 1158 - 0.457686
NA PG0330 DNA-binding protein, histone-like familychromosome CDS364568 516 - 0.600775
NA PG0820 integrasechromosome CDS878721 1203 + 0.454697
NA PG1691 conserved domain proteinchromosome CDS1775870 705 - 0.510638
NA PG1453 integrasechromosome CDS1535739 1203 - 0.454697
NA PG1038 ATP-dependent DNA helicase UvrD/PcrA/Rep Familychromosome CDS1102884 2298 + 0.485205
NA PG1300 conserved hypothetical proteinchromosome CDS1378620 540 - 0.464815
NA PG2040 DNA-binding protein, histone-like familychromosome CDS2138488 477 - 0.534591
NA PG1906 ISPg1, transposasechromosome CDS2005547 1086 + 0.481584
NA PG1276 DNA-binding protein, histone-like familychromosome CDS1353085 507 + 0.540434
NA PG1320 ISPg1, transposase, internal deletionchromosome CDS1398892 636 + 0.47956
NA PG2101 hypothetical proteinchromosome CDS2210368 996 - 0.517068
NA PG1362 conserved hypothetical proteinchromosome CDS1442230 1455 - 0.485223
NA PG0875 mobilizable transposon, tnpA proteinchromosome CDS938192 903 - 0.415282
NA PG1644 ISPg5, transposase Orf2chromosome CDS1724771 939 - 0.499468
NA PG0838 integrasechromosome CDS895617 1299 + 0.498845
NA PG1316 hypothetical proteinchromosome CDS1396331 531 - 0.474576
NA PG1244 ISPg1, transposasechromosome CDS1319674 1086 + 0.486188
NA PG0199 TatD family proteinchromosome CDS237514 714 - 0.481793
NA PG1500 conserved domain proteinchromosome CDS1576239 2292 + 0.522251
NA PG0019 ISPg4 transposasechromosome CDS22180 1158 + 0.455095
NA PG1673 ISPg4, transposasechromosome CDS1758528 1158 + 0.455959
NA PG2202 conserved hypothetical protein TIGR00250chromosome CDS2309607 417 - 0.563549
NA PG0970 ISPg4, transposasechromosome CDS1029746 1158 + 0.457686
NA PG0223 exonucleasechromosome CDS257209 492 - 0.581301
NA PG0851 conserved hypothetical proteinchromosome CDS911656 1167 - 0.466153
NA PG1350 ISPg2, transposasechromosome CDS1431006 1131 + 0.418214
NA PG2194 ISPg4, transposasechromosome CDS2301052 1158 - 0.452504
NA PG0487 ISPg4, transposasechromosome CDS526366 1158 - 0.457686
NA PG1496 hypothetical proteinchromosome CDS1573482 276 + 0.507246
NA PG1852 exonucleasechromosome CDS1951284 780 - 0.49359
NA PG1248 conserved hypothetical proteinchromosome CDS1325891 732 - 0.515027
NA PG0949 conserved hypothetical proteinchromosome CDS1008826 1008 + 0.499008
NA PG0041 ISPg5 transposase Orf2chromosome CDS48517 939 + 0.502662
NA PG0461 ISPg7, transposasechromosome CDS503529 1308 - 0.446483
NA PG2020 CRISPR-associated protein, TM1814 familychromosome CDS2111698 666 - 0.492492
NA PG1982 CRISPR-associated protein Cas1chromosome CDS2069615 3096 - 0.50646
NA PG1303 helicase, putativechromosome CDS1380792 1416 + 0.500706
NA PG0816 hypothetical proteinchromosome CDS876476 474 - 0.489451
NA PG1622 DNA topoisomerase IV, A subunit, putativechromosome CDS1701508 2697 - 0.503152
NA PG0549 ISPg1, transposasechromosome CDS606077 1086 - 0.486188
NA PG1874 conserved hypothetical proteinchromosome CDS1969343 408 - 0.536765
NA PG0591 ISPg5, transposase Orf2chromosome CDS648624 939 + 0.499468
NA PG2128 ISPg5, transposase Orf2chromosome CDS2233957 939 - 0.497338
NA PG0819 integrasechromosome CDS877466 1230 + 0.472358
NA PG1735 MutT/nudix family proteinchromosome CDS1822618 555 - 0.502703
NA PG0172 exonucleasechromosome CDS193633 783 + 0.536398
NA PG0874 mobilizable transposon, int proteinchromosome CDS937000 1104 - 0.432065
NA PG1746 ISPg2, transposasechromosome CDS1831190 1131 - 0.418214
NA PG1197 ISPg1, transposasechromosome CDS1275565 1086 - 0.481584
NA PG0225 ISPg4, transposasechromosome CDS258575 1158 - 0.457686
NA PG0086 ATP-dependent RNA helicase, DEAD/DEAH box familychromosome CDS100635 1815 - 0.50303
NA PG0787 hypothetical proteinchromosome CDS837815 243 + 0.477366
NA PG1494 conserved hypothetical proteinchromosome CDS1569981 1314 + 0.541096
NA PG1177 ISPg1, transposasechromosome CDS1257884 1086 - 0.481584
NA PG0825 ISPg1, transposasechromosome CDS882153 1086 - 0.481584
NA PG1262 ISPg3, transposasechromosome CDS1339822 903 - 0.408638
NA PG1032 ISPg3, transposasechromosome CDS1094473 903 + 0.40753
NA PG0915 conserved hypothetical proteinchromosome CDS976725 393 + 0.386768
cas1 PG2014 CRISPR-associated protein Cas1chromosome CDS2104579 1017 - 0.429695
cas2-1 PG1981 CRISPR-associated protein Cas2chromosome CDS2069305 291 - 0.474227
cas2-2 PG2013 CRISPR-associated protein Cas2chromosome CDS2104316 264 - 0.371212
cas4 PG2015 CRISPR-associated protein Cas4chromosome CDS2105592 513 - 0.436647
dnaA PG0001 chromosomal replication initiator protein DnaAchromosome CDS1 1422 + 0.508439
dnaB PG1242 replicative DNA helicasechromosome CDS1317575 1587 + 0.536232
dnaE PG0035 DNA polymerase III, alpha subunitchromosome CDS42688 3687 - 0.492813
dnaG PG1814 DNA primasechromosome CDS1908696 2022 - 0.488131
dnaN PG1853 DNA polymerase III, beta subunitchromosome CDS1952076 1134 - 0.499118
dnaX PG1418 DNA polymerase III, gamma and tau subunitschromosome CDS1503204 1809 + 0.505252
dprA PG0295 DNA processing protein DprA, putativechromosome CDS330266 1125 - 0.546667
gyrA PG1386 DNA gyrase, A subunitchromosome CDS1466459 2580 - 0.506589
gyrB PG1702 DNA gyrase, B subunitchromosome CDS1788036 1965 - 0.501781
hup-1 PG0121 DNA-binding protein HUchromosome CDS144608 267 + 0.441948
hup-2 PG1258 DNA-binding protein HUchromosome CDS1334674 279 - 0.426523
ligA PG1253 DNA ligase, NAD-dependentchromosome CDS1329687 2010 - 0.504478
mfd PG1774 transcription-repair coupling factorchromosome CDS1861269 3369 - 0.52152
mutL PG0412 DNA mismatch repair protein MutLchromosome CDS449674 1857 - 0.525579
mutS PG0095 DNA mismatch repair protein MutSchromosome CDS112178 2676 - 0.532511
mutY PG1378 A/G-specific adenine glycosylasechromosome CDS1457805 1224 - 0.486928
nth PG1772 endonuclease IIIchromosome CDS1859219 675 + 0.53037
ogt PG0486 methylated-DNA--protein-cysteineS-methyltransferasechromosome CDS525497 528 - 0.515152
polA PG1794 DNA polymerase type Ichromosome CDS1886118 2781 + 0.522474
priA PG2032 primosomal protein N'chromosome CDS2130958 2514 - 0.526253
radC PG0894 DNA repair protein RadCchromosome CDS956168 684 - 0.530702
recA PG0881 recA proteinchromosome CDS943203 1023 + 0.507331
recF PG0398 recF proteinchromosome CDS434706 1095 - 0.484018
recG PG0348 ATP-dependent DNA helicase RecGchromosome CDS382485 2097 + 0.541249
recJ PG0054 single-stranded-DNA-specific exonuclease RecJchromosome CDS65205 1755 + 0.497436
recN PG1849 DNA repair protein RecNchromosome CDS1947469 1656 - 0.505435
recQ-1 PG0416 ATP-dependent DNA helicase RecQchromosome CDS455223 2178 - 0.46786
recQ-2 PG1831 ATP-dependent DNA helicase RecQchromosome CDS1923545 1968 - 0.53811
recR PG1255 recombination protein RecRchromosome CDS1332218 624 - 0.477564
rnhB PG0736 ribonuclease HIIchromosome CDS785748 606 + 0.539604
ruvA PG0811 Holliday junction DNA helicase RuvAchromosome CDS872691 609 - 0.502463
ruvB PG0488 Holliday junction DNA helicase RuvBchromosome CDS528309 1032 + 0.55814
ruvC PG1324 crossover junction endodeoxyribonuclease RuvCchromosome CDS1402952 570 - 0.515789
ssb PG0271 single-stranded binding proteinchromosome CDS303982 471 + 0.498938
topA PG0754 DNA topoisomerase Ichromosome CDS801083 2367 + 0.507816
topB-1 PG0104 DNA topoisomerase IIIchromosome CDS125481 2028 + 0.525148
topB-2 PG1495 DNA topoisomerase IIIchromosome CDS1571383 2094 + 0.553486
umuC PG1338 umuC proteinchromosome CDS1418386 1299 + 0.501155
ung PG0237 uracil-DNA glycosylasechromosome CDS274918 669 + 0.511211
uvrA-1 PG1036 excinuclease ABC, A subunitchromosome CDS1098576 2904 + 0.466253
uvrA-2 PG2210 excinuclease ABC, A subunitchromosome CDS2321042 2859 - 0.543197
uvrB PG0380 excinuclease ABC, B subunitchromosome CDS409242 2037 + 0.551301
uvrC PG1993 excinuclease ABC, C subunitchromosome CDS2083461 1800 + 0.496667
xerD PG1732 integrase/recombinase XerDchromosome CDS1820311 927 + 0.500539
xseA PG1128 exodeoxyribonuclease VII, large subunitchromosome CDS1203877 1383 + 0.535792
xth PG0269 exodeoxyribonuclease IIIchromosome CDS302168 765 + 0.467974