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# Synechococcus sp. JA-3-3Ab, JA-3-3Ab

>CYA_2573 ISSoc2, transposase
MTITSLPSRNWLRISSPSCTASAVGSTDSGNIGLQSRKIRIYPEPALAKV
WKRWQAACRYCYNQAIAYQRQHGAPKTARKLRDIILHSDLPGWVKDAPCH
IKQNAVVEAWLAFRRSKDARFRSVRDRSHTLQFNAGNFRNGTWYPKLTRG
LAFRASEEMPREWARGTELMRVKDRWYAIFPEPVNEQCSLAKGVIALDPG
VRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSRLSKAPRPKRRRMR
QAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKF
GSKTARAMLTWAHYRFKQLLKFQAKKKNVVVVEVSEAYTSKTCTKCGHIH
TKLGGAKVFRCPKCNHRLPRDWQGALGVMLRALRDTAFLFGLRPSSAVAS
ASRSDNGNGQNAIASPLSSNAQQCSA
>CYA_2653 ATP-dependent helicase, DEAD/DEAH box family
MNPLLSPATDLLDELRRLFPFELDEFQIRAIQALAAGESVVVCAPTGSGK
TLIGEYAIYRALSQGKRVFYTTPLKALSNQKFRDFGQQFGPERVGLLTGD
ISINREAPILVMTTEIFRNMLYGTPLSLAVQQGAYASEMDAWEQAEALSR
DPLQDVQAVILDECHYMNDQQRGTVWEEAIIYCPAHIQLVALSATLANSD
QLTDWMNQVHGPTRLIDSSHRPVPLQFHFANRKGLFPLLEQTESGQWVCN
RRLKSKLPKSGQSSYGGVPDMVQVVENLRQRDMLPAIYFIFSRKGCDLAV
ASVGNLDLIASEAERQQLAEQIDRFCRETPEAVRRDQLDALYRGIAAHHA
GMLPAWKGLVEHLFQQGLVKLVFATETLAAGINMPARTTVISSLSKRTDN
GHRLLTASEFMQMSGRAGRRGKDVIGHVVTLQSPFEGAQEAARLATAGAD
PLVSQFTPTYGMVLNLLQKHSLEAARDLINRSFGQYLLSLQKLPEQQELQ
HTRAELEEIDRLLEGISDEDIARYEKMQAQRREERRILRYLLKQREAEPD
PTLRLLAFPHIQAQEEKIRALEARIRANPAHRVGKKLLGLQEKRQRLRKR
LQHLERQSDSVQELRWQQFMALVGVLQEFDCLREYQPTASGEVVAALRGD
NELWLALALLSGECLGCAPHHFAGVIAALVAEPPRSGTYSRLRTSGLVED
VLHGLRGLRRQLFRSQRQHQVFHVPIGFEPGLAGIVEHWAQGIPWEQLEA
STNLDAGDIVRLIRRTLDLLSQIPYIPHLPAELRENARKAQKLLDRFPVS
ELI
>CYA_2440 ISSoc2, transposase
MTITFLPNRNWLRISSPSCTASVVGSTDSGNIGLQSRKIRIYPEPALAKV
WKQWQAACRYCYNQAIAYQRQHGAPKTARKLRDIILRSDLPGWVKDAPCH
IKQNAVVEAWLAFRRSKDARFRSVRDRSHTLQFNAGNFRNGTWYPKLTRG
LAFRASEEMPREWARGTELMRVKDRWYAIFPEPVNEQCSLAKGVIALDPG
VRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSRLSKAPRPKRRRMR
QAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKF
GSKTARAMLTWAHYRFKQLLKFQAKKKNVVVVEVSEAYTSKTCTKCGHIH
TKLGGAKVFRCPKCNHRLPRDWQGALGVMLRALRDTAFLFGLRPSSAVAS
ASRSDNGNGQNAIASPLSSNAQQCSA
>CYA_1311 ISSoc4, transposase orfAB
MPTHSLDLRQRVVAAYQAGNTSIRQVAKRFMVTKRTVHRWVRQYQQTQDL
APKKAGTKRVGILEQHRQEVMAIITEHPDFYLWQYQELLRERLGINVSIV
TIHNFLKKQGMTLKKKTYRSAKVKEEELQRERLAYSQEVRNIPAEDLIAI
DQTGVWEGMERRVSRSLRGQRAYHYRQRYKGEKYTVIGAISLRGVVGCRV
IKGGMKKGDFLEFLRSELCPKLDARKDLNIHKSREVEELIRGTGARILYL
PVYAPELNPIEMMWSVLKHFIRQLCRIGKYSMEQIVKTSLLLINPSSFRS
WFAKCCYCTP
>CYA_2637 ISSoc4, transposase orfB
MQRERLAYSQEVRNIPAEDLIAIDQTAVWEGMERRVSRSLRGQRAYHYRQ
RYKGEKYTVIGAISLRGVVGCRVIKGGMKKGDFLEFLRSELCPKLDARKV
VIMDNLNIHKSREVEELIRGTGARILYLPVYAPELNPIEMMWSVLKHFIR
QLCRIGKYSMEQIVKTSLLLINPSSFRSWFAKCCYCTP
>CYA_2389 putative single-strand binding protein
MSLNLVTLVGRAGMDPEVRYFESGRVVCTFSLAVNRFRKGEDKPDWFNLE
LWGRTAEVAGEYVRKGSLIGVTGSLKFDRWKDKSTGEDRQRPVIAVDRLE
LLGSRQDREADLPAEEPF
>CYA_0437 ISSoc6, orfA transposase
MREGSQRYNHYNHAVGLAVVRLVFCPKRRKKVLVGEVRNRLFELWQELSS
EKGWHVRAIEIAPDHVHLFLEIKPTDPIHLVVKAFKGRASKYLRQKFPNL
RKLPSLWSRSYFFCTAGNASAEVIQNYINDPHHW
>CYA_0887 ISSoc1, transposase
MTQVLTVSCKLKASQSQAAKLDATLEAFGQALNWVNQNTPEKVANAVKLQ
SLCYREIRARFGLSSNLAQQVCRRLAGARKVAQQKNRPVKAFKRGFATYD
ARIFSFREKDWTVSLTTVEGRERFELAIGRYQRERLAGSNPKSATLVKHK
DGSYSIQICVETEPSPPQRTGRVLGVDLGRTDIAHTSEGDNWNGQQLNRI
RDHYSKLRAALQRKASKGTRSSRRRCRQLLQRLSGKERRFQTWVNHRISK
AIVSRAKATNSAIALEDLTGIRERVNQQPRSKAERRRANSWAFYQLRQFL
EYKALRAGVALILVPPAYTSQTCHRCLHIHPDPAQSYRSGKKFKCGHCGW
EGDADLNGANVIALLGAAVNQPRGSWLACQLQGYRKPALYCEAVRVG
>CYA_2616 putative DNA mismatch repair protein MutL
MSKIQPLNPERIAQMAAGEVIDSLGAALRELLENALDAQATRIQVEIWPS
RWQVRVADNGQGIPASELEQVARRHTTSKLDGCSLGFRGEALHSLARLGS
LTIQTRHADDAHGWLATYDRQGELAHQQPAATALGTVVTVADLFADWPLR
RCSLPQTRPLLTLVQNAALAHPWVSWQVRQEGQLLLSLWPGQSLQDLLLQ
VLPQVDLSDLRYQRIQEGDSDWEVVLGLPDRLHRPRPDWIRVAVNGRFVQ
MPEWQRLIQSVFQHTLPRHRYPLVVVHLRLPPEQVDWNRHPAKSELYLQD
PEIRQEQLRQHLHALLQSGSEQASRRSLHLIRASEAKSVYRVTSSPKSPD
PAPSGQPSTPLPPLKALAQLYRTYILAEHPQGLWLVEQHLAHERVRYEYI
QRHWQPVELQMPVMLEGLSSQAVEQLEQLGLEPEPFGPNTYLMRRLPLAL
WSEDPEEVQGSLRELSRCADLEAAQVAVACRGALRNGIPLTLEQMQQLLE
AWQRTANPHTCPHGRPVYLALAEKDLARYFRRRWGICDRPISDPKLGSWW
ELEPLGDRFAAQVRRSSSASAPDPKDETRSAPL
>CYA_2381 site-specific recombinase, resolvase family
MSVCGYLYTPAHASWPDQELAWLKAHGADPIWHDWGSRIHLEELLQGIAA
GSVQQVLLVRLADLGDRVEEVHQRLLQIQQAGLRLSLVNESGLHTPSAAA
DWIPLLAELPHQLQSRRLCCSQAQNRLAGKPPPGPAPFGYRREGDRYALD
RRQAPIVQDFFQHFLLYGSLRQAVRFIAEKHHKRISVATGRNWLLNPVYR
GDLAYADGTVLRDTHPALLSRAEAAQIDRWLKRNQKIPRRSASAPRALAG
LVHCRVCGSLLRIVQTTPRKAKKNGSSYLYLRCQTCRYSLHYAAVLQEVI
RQVCQQLPQRAQNLDRQALDQTRQQLQAQIQANSERLRQLEELQQSGLMD
EPALAQRCYQLRAETARLAQKLEQLPPANFLQIAQTLSIPPFWQDLSESE
RRAYLREFLRRVEVDSTGAVQMTFAFDP
>CYA_2694 ISSoc2, resolvase
MARYVKPREAADYFGVCLHTLRRWEQKGWIHAIRTPSGRARRYDLDSYIG
LRPADANKAPRKAKRVVLYARVSSRGQKPDLERQIARLVNLYPGAEVVGE
VGGGLDFKRPKFLALLERVRAGDIGTIVVAHRDRLCRFGFEFVEWYCRQY
GCEILVLDDDHLSPQQELVEDILTILHCFSSRLYGLRKYRAAIEKDTDLS
GASAG
>CYA_1502 hypothetical protein
MGSPPLSAKWRRKILEIAYVDSRCFPFFYGYLGYDGDVNVGNAEEIQMQA
GVDLTLDYRTYRLAALLSEHFPMGELLGVSLKWQDDASAVDKLQTEVARS
WREQIEQRYLVPRHK
>CYA_0395 ISSoc2, transposase
MTITFLPNRNWLRISSPSCTASAVGSTDSGNIGLQSRKIRIYPEPALAKV
WKRWQAACRYCYNQAIAYQRQHGAPRTARKLRDIILRSDLPGWVKDAPCH
IKQNAVVEAWLAFRRSKDARFRSVRDRSHTLQFNAGNFRNGTWYPKLTRG
LAFRASEEMPREWARGTELMRVKDRWYAIFPEPVNEQCSLAKGVIALDPG
VRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSRLSKAPRPKRRRMR
QAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKF
GSKTARAMLTWAHYRFKQFLKFQAKKKNVVVVEVSEAYTSKTCTKCGHIH
TKLGGAKVFRCPKCNHRLPRDWQGALGVMLRALRDTAFLFGLRPSSAVAS
ASRSDNGNGQNAIASPLSSNAQQCSA
>CYA_2415 ISSoc3, orfA transposase
MVVAGQDPVLVGDNHETVLAFSATSYNIGHRSVYSLQIHLVLVTKYRRRV
ITAPMLQRLEDIFRATCQKWRCSLVEFKGEADHVHLLVSFPPDVQVSKLV
NNLKTVSSRLIRKEFATEVARFYSKPVFWTGAYFVASCGGVTVEELKKYV
EQQATPRL
>CYA_0037 ISSoc4, transposase orfA
MPTHSLDLRQRVVAAYQAGNTSIRQVAKRFMVTKRTVHRWVRQYQQTQDL
APKKAGTKRVGILEQHRQEVIAIITEHPDFYLWQYQELLRERLGINVSIV
TIHNFLKKQGMTLKKRPTAVQKSKKRRCKGND
>CYA_2722 ISSoc4, transposase orfA
MPTHSLDLRQRVVAAYQAGNTSIRQVAKRFMVTKRTVHRWVRQYQQTQDL
APKKAGTKRVGILEQHRQEVMAIITEHPDFYLWQYQELLRERLGINVSIV
TIHNFLKKQGMTLKKDLLQCKSQRRGGAKGTTSL
>CYA_0727 ISSoc2, resolvase
MARYVKPREAADYFGVCLHTLRRWEQKGWIHAVRTPSGRARRYDLDSYIR
APKKDKRVVLYARVSSRGQKPDLERQIARLVNLYPGAEVVGEIGSSLDFK
RPKFLALLERVRAGDVGTIVVAHRDRLCRFGFEFVEWYCRQYGCEILVLD
DDHLSPQQELVEDILTILHCFSSRLYGLRKYRAAIEKDTDLSGASAG
>CYA_1890 ISSoc2, transposase
MTITSLPSRNWLRISSPSCTASAVGSTDSENTGLQSRKIRIYPEPALAKV
WKRWQAACRYCYNQAIAYQRQHGALKTARKLRDIILRSDLPEWVKDAPCH
IKQNAVVEAWLAFRRSKDARFRSVRDRSHTLQFNAGNFRNGTWYPKLTRG
LAFRASEEMPREWARGTELMRVKDRWYAIFPEPVNEQCSLAKGVIALDPG
VRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSRLSKAPRPKRRRMR
QAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKF
GSKTARAMLTWAHYRFKQLLKFQAKKKNVVVVEVSEAYTSKTCTKCGHIH
TKLGGAKVFRCPKCNHRLPRDWQGALGVMLRALRDTAFLFGLRPSSAVAS
ASRSDNGNGQNAIASPLSSNAQQCSA
>CYA_0126 putative nuclease SbcCD, D subunit
MVKLLHFSDIHLGSGLAYGSINPATGLNTRLEDFVASLRLCIDHALDQAV
DLVLFGGDAFPDATPPPLHQELFAQQFRRLADARIPTVLLVGNHDQYGQG
QEGNSLAIYRALGVAGFVVGDRLQTHWIETRSGPVQVTTLPWLNRSTLLA
RQESLDLNAEVFTQQLLQRLDLALEGEIRTLQPGIPAILLAHVMVDTARY
GTERHLSVGKGVTVPLSLLARPAYQYVALGHVHRHQVLCRDPLVIYPGSI
ERVDFGEEQEEKGCVLAEVTATGASYEFLPLPTRTFHSIRLDLTPYPPQE
VQAKLLEAIAKAPVPGSILRLIYRLRPDQLDCVDERTLHQALAPAFSYTL
VPDVVSPSRIRLPALDPSCLEPLTALEHYLADRSDLAPLRNELLAAARQL
LAEAADPLSEGNANREEADPASLAEGEEQQLPLF
>CYA_2221 ISSoc3, orfA transposase
MVVAGQDPVLVGDNHETVLAFSATSYNIGHRSVYSLQIHLVLVTKYRRRV
ITAPMLQRLEDIFRATCQKWRCSLVEFKGEADHVHLLVSFPPDVQVSKLV
NNLKTVSSRLIRKEFATEVARFYSKPVFWTGTYFVASCGGVTVEELKKYV
EQQATPRL
>CYA_2418 hypothetical protein
MQTIPVVKSAMQRVKSMMQKSLRSVPISHRPKSLLISQGRSLIKLSSLLA
LPLLVSAWPAWALTLVARPDLRSLKRAQVIRVVDYNTLVVQLEGDLNLRL
VQLIGIAPLPAELNPTWTKLRGQTPLPISNAGQYLQTALLGREVFLELDP
ALAPTPTLPAYVWRANTLINQEMLFLGHGLLSPQTNGLKYGVILKEAANA
ARQQGRGYWTPYGPR
>CYA_1958 ISSoc3, orfA transposase
MVVAGQDPVLVGDNHETVLAFSATSYNIGHRSVYSLQIHLVLVTKYRRRV
ITAPMLQRLEDIFRATCQKWCCSLVEFNGEADHVHLLVSFPPDVQVSKLV
NNLKTVSSRLIRKEFATEVARFYSKPVFWTGAYFVASCGGVTVEELKKYV
EQQATPRL
>CYA_0999 ISSoc4, transposase orfA
MPTHSLDLRQRVVAAYQAGNTSIRQVAKRFMVTKRTVHRWVRQYQQTQDL
APKKAGTKRVGILEQHRQEVMAIITEHPDFYLWQYQELLRERLGINVSIV
TIHNFLKKQGMTLKKRPTAVQKSKKRRCKGND
>CYA_2271 conserved hypothetical protein
MNSEYYSYDNYVLDQAEIDRLLDLLPASMRESVKILPASERQTVVIKGRR
QMPWERQMRLFIKPYEWRQFTPLQRAGLFLHKVGYYSRAASRQIDFYLAI
AALGGLSLIFEVVQQDPVGATVSGGLSGLALWQLRRDQTNDRRLLAADAY
AVDRLVLRGIPRLQAVEALGQALHVEARLEGRSGNDLLDMLRYQNLKRLA
QRPAEDIVLS
>CYA_0808 ISSoc2, resolvase
MARYVKPREAADYFGVCLHTLRRWEQKGWIHAVRTPSGRARRYDLDSYIR
TPKKAKRVVLYARVSSRGQKPDLERQIARLVNLYPGAEVVGEIGGGLDFK
RPKFLALLERVRAGDVGTIVVAHRDRLCRFGFEFVEWYCCQYGCEILVLD
DDHLSPQQELVEDILTILHCFSSRLYGLRKYRAAIEKDTDLSGASAG
>CYA_2519 RecF/RecN/SMC N terminal domain protein
MRILSLALQNFKSHEDAFFEFEPGINAICGENGAGKTSILEAIAWVLFDY
CPYNQEELIRTGASDAVATVQFISQWDQRTYDVRRSVRQGYRLFDPQLKQ
RLDYERKADVLAWLRQHLGVPAGTDLARLFATTIGVPQGTFTADFLKTSR
ERKEVFDRILKVEEYQQVAKDLLAVEKYSEAQVLAVKHQIELLHQQMQDW
DPLQVEQQRIEQELSHWQERLSHHTHTLAEVKLELERLEKLLEQIQTLDR
QIAQLEQEGSLLAVALEQAEKLWAEAQRAQAQQQHHQEGSQRFLAIEDRL
RELEKQRQQRLEWLKRREALLSQKQNLENQLARLQEKLSQQQRCKQELEE
LAPQIQAQEELERRQSHWAQQLDTLLQLHREWEQLQGEWSAHAGRCQLLQ
SRVQEAEQAQAICQQHESAYRRYLELEAWVAEQEALRRTRQTLTAQRETL
RQQLHQLQLRESEYRQQLQLFQKIEEEKLHLQTLCEKQTVLEQRYSQIGQ
KLASFQALRLELRQRETEQEQGRAQLEQLRLQLRQRQADREHVAKIPLLE
AQQERLQTQLSRLAAARQFQRELQALFEQGSHQLAQHNRSIQTLVEELAA
CQQSYPQLQPLWQRIPQVLAQSSALSQQLLQSIQQILQDLSPQTCEPQLR
QQLADIQEQLKTLQPLLGLTAQIPELEAQIQQLLQWQNERQSKIEDLQWS
LEAEPDFLRQQQEIGQALQALGDPRGQIQRLEKELNNKPRVEQEYQQVVA
SIQQLQQQIQALEQQLQPLADLDERIAALREEQSCHRNSYETVIRMQPLV
QSLPQRKDELQTAQLALEQIQQAKQEKQAQIDRWEKIEGSKDYLQAQIVK
AAETLKSLGDPRSRAEWLKAELKLERQYLQTQAGCLQQIQDLEAALRPLE
EALLQTEHLDRELGSLQEQREHYRADHEQYLGLEPIAKLLPQRERKLSEL
KAQQQALQTQLSQLRAQRDPLASLYQPQEHQRLRSLLQATEIQKAEAQAR
LESLAPQLQKIQERLQQLERVRETLKQVETQRIEKERLHRFIKFSRDTYK
KAGPQITQYYLQQINNIADHLFREILNRPNVALTWEADYEIRVQEGGGPK
RRFASLSGGEQMSAALAVRLALLKVLGQLDIAFFDEPTTNMDAQRRQRLA
ESITNLRSFEQLFVISHDDTFEQVTENIIRVERHAGSGQMRRDPTYGI
>CYA_0595 ISSoc2, resolvase
MARYVKPREAADYFGVCLHTLRRWEQKGWIHAVRTPSGRARRYDLDSYIG
LRPADANRAPKKDKRVVLYARVSSRGQKPDLERQIARLVDLYPGVEVVGE
VGGGLNFKRPKFLALLERVRAGDVGTIVVAHRDRLCRFGFEFVEWYCRQY
GCEILVLDDDHLSPQQELVEDILTILHCFSSRLYGLRKYRAAIEKDTDLS
GASAG
>CYA_2580 ISSoc3, orfA transposase
MVVAGQDPVLVGDNHETVLAFSATSYNIGHRSVYSLQIHLVLVTKYRRRV
ITAPMLQRLEDIFRATCQKWRCSLVEFNGEADYVHLLVSFPPDVQVSKLV
NNLKTVSSRLIRKEFATEVARFYSKPVFWTGAYFVASCGGVTVEELKKYV
EQQATPRL
>CYA_1374 ISSoc2, resolvase
MARYVKPREAADYFGVCLHTLRRWEQKGWIHAVRTPSGRARRYNLDSYIG
LRPADANRAPKKDKRVVLYARVSSRGQKPDLERQIARLVNLYPGAEVVGE
VGSGLNFKRPKFLALLERVRAGDVGTIVVAHRDRLCRFGFEFVEWYCRQY
GCEILVLDDDHLSPQQELVEDILTILHCFSSRLYGLRKYRAAIEKDTDLS
GASAG
>CYA_0704 ISSoc1, transposase
MSQVLTISYKLKVSPSQAAKLDATMDAFVQALNWVNQNTPEKIVNAVKLQ
SLCYYEIRARFGLSSNLAQQVCRRVAGARKVARQRNRPVKEFKRRFVTYD
ARIFSFREKDWTVSLTTVEGRERFELAIGNYQRGMLAGSNPKSATLVQRK
DGSYYIQICVEKNPPKQQDTDRVIGVDLGRTDIAHTSEGDNWNGQQLNRV
RDHYSKLRAVLQRKASKGTRSSRRRCRQLLQRLSGKERRFQAWVNHRISK
AIVSRAKATNSALALEDLTGIRERVNQQPRSKTERRRANSWAFYQLRQFL
EYKALRAGVALILVPPAYTSQTCHRCLHIHPDPAQSYRSGKSFKCGHCGW
EGDADLNGANVIALLGAAVNQPRGSGLFCSLVEQNRLRATESPLRTA
>CYA_0690 ISSoc1, transposase
MTQVLTVSCKLKASQSQAAKLDATLEAFGQALNWVNQNTPEKVANAVKLQ
SLCYREIRARFGLSSNLAQQVCRRLAGARKVAQQKNRPVKAFKRGFATYD
ARIFSFREKDWTVSLTTVGGRERFELAIGRYQREQLAGSNPKSATLVKRK
DGSYSIQICVEAEPSPPQRTGRVLGVDLGRTDIAHTSEGGNWNGQQLNKV
RDHHSRLKAVLQRKASEGTRSSRRRCRQLLQRLSGKERRFQSRQRCVAKT
WVNHRISKAIVSRAKATNSAIALEDLTGIRKRVNQQPRSKAERRRANSWA
FYQLRQFLEYKARAAGVSLILVPPAYTSQTCHKCLHIHPDPAQSYRSGKS
FKCGHCGWEGDADLNGANVIALLGAVVNQPRG
>CYA_2392 ISSoc2, resolvase
MARYVKPREAADYFGVCLHTLRRWEQKGWIKAIRTPSGRARRYDLDSYIR
TPKKAKRVVLYARVSSRGQKSDLERQIARLVNLYPGAEVVGEVGGGLDFK
RPKFLALLERVRAGDIGTIVVAHRDRLCRFGFEFVEWYCRQYGCEILVLD
DDHLSPQQELVEDILTILHCFSSRLYGLRKYRAAIEKDTDLSGASAG
>CYA_0933 hypothetical protein
MKGDFGTGKSHLLLTLQEKAKKQGFATSLVVISKELPLGNPSRLIPRILA
EIELPDMAERGLQGIAARLQYKQPSFQEFQLSVNQWRFGEGWWPATLALH
QRLEGDDEKLDAIVRFWAGEPTLRLSEVRQRLRDHGLAGAYSVSKLPPAE
SLHWQRLAFSAQLCRAIGLRGLVVLVDEIELIAQYSILQRVKSYRVLGHL
FGKETLPEELKAAPLILAGAVTRDFEQSILQEKGDREKAPEMARQKHISE
EAVKAGMEAIQQAIPLRSCSEAQEAIQAMLHKVADLYQKAYPDWVRPSRS
ELPPLYGTTTVRSIIRRWITEWDVRRYYNPTGTVQIEEDKATGHTPTEEI
QELEEEA
>CYA_1886 hypothetical protein
MYVYCPEEVLEAGAPYNLEELIERLEQGDRTLLSRLFDVRYPYWKRNLRR
NVRLVADLRYLGEVPVLVLFGLWGRGSHEYREFLERRQDPSYQERVRNWV
SDDQLQAWLAQRQAENEQEEARQNQLLPPPNELYDWTQFLNTPNRQERLV
LESGEWVRQVQALSLEQRRQVYRAVEQFIIGDEKGNLYWKLPLFYPETEV
RCWREGSIHLAISLVQVCEQEKVLSPFLIGVYDHAPEQRERFDLGRRTCL
FGRGADQPDILQHPQSLEIWKRYARRAYPDSMVADENVWLEIQETTEGNL
ALSMEEEEILQSTSMPLLINGRAGSGKSLMLYYRFADYCSHYLKDSSKGS
FQYRPLFLTYSPSLVQQARSKVSTILRVNHRYRERGSDFSEGEIERCQAF
FSTFQDYLLSCLPPERQERYQPERYVNFYRFRSWYRGRSDVELAWHTIRT
LIKGYGVSDYLDPDCYRELPQADRTVNVEVFDRIYEQVWPGYQERTTYGS
YWDDQDLARDVLQNGFLRSIHPVIFCDEVQDFTQLELNIVFCLSPWGKYK
LDWAIERLPYAFAGDPLQTINPTGFRWGALRRYLYEHIHAYLLPGHSLEI
PSPRELKNNYRCSPQITCFSNLINLWRRVLSNDRGICPQQPWRFQEPGRP
AQKFVLDGQDKNLTQHELRSMLRNSTGTVCILPCSIGEELDYVRQDPDLQ
RVFAEELEQNLKPALLQTVTAVKGMEFKKIILYKFGDCYRQNFSRRLNHY
AQEAAEKVSLQLHYFLNQLYVGITRPIEALAVVDTAAGWREFWDPALEID
FWLNHSHLQPDRSQWQTHPPVLAGFAQGTGIQYWTDKNLQDVLDLALGFL
RQGVEEGNPELLEDARAFARQAGNQKLEQECQAWILKLQRDYVSAGRQFL
SLERSALPNRNLIREAWECFWKAKAWSELQQHRSTHFARCSEIPNYGPLV
DLMVVTQSSSAKSMERFRQIVRVRDWLSVEVSPKHSDLTWKVCVEKFLAE
LEEVFDNLGTFCPKPEDRELFWQETLEALRERLAFLGQRQPFAGQYHKIL
GICYFQQQKLEEAVAIWDQGGQTEHSRYYRAKIQLEKPPGQVRWLSKDRQ
DAAVVSKWQEAGRPLAGEWEEYINDVILSLERLKEWPLLLRILIRRREWC
RLWEVVQAHPQAWQRGHDYELVASMARDMETNWDELRWKLPGLRDFLQEV
VSSVRGEHAWWLQPLEVGLAYERLGCYRDALRFYERFAENRIGRIPRWQR
SQIRQRWLLVHKKYRDSLQAEGRPTDLLAEEFSRAQERWREQLPQAEPEL
EEWDPWPHDFVEHPSPVQSWLLQREQTEAQRLQVAIREELKRLNERQLQQ
VHSLIQRLLGPG
>CYA_0876 CRISPR-associated RAMP protein
MHKRYVNHCTLCLTLKPDGPVLIKAGKQGADPTKPDMEFVETYRGGGRTV
YFPGSSLKGAIRAHAERIVRTVGGDRRPEGNKLQLWASDPLDQKANQWLE
KIAESHRVYALSSFTDQMFGNTAIASRLRIEDAYPKPGTPLRLEERNGVA
IDRVFGSVAVGPFSYQVCVEGSFQTKIHLKNFTLAQLGLLGLVLRDLDEG
WFGIGFAKSRGMGRVRVEYEWATVDYPGCLVEEGSQELRLLGSQLAWPRG
SLLGASEFLSPEEAGKYGFAKPDRQLVPVGAEPMPLGFGARLTWDQTSEA
KVEHLLATAVNSWAKLLQAEAKAV
>CYA_1940 thermonuclease
MFRRIAVGSAVLGWLLALPGHGFGERRVVPDTPFYFDNHYFDRYPDAVVV
SVVNGDTLVVQVEGEQKLRLIRLAGIQGLSPEEDPFYQQAIELMRERILH
RTVKLEGDKLLRNVDATGLVEAYVWLEGQQMNAMLVRNGLARIAPYSHNI
KYDSYFGGLQKRARQERLGIWSRL
>CYA_2695 ISSoc2, transposase
MTITFLPSRNWLRISSPSCTASAVGSTDSENTGLQSRKIRIYPEPALAKV
WKRWQAACRYCYNQAIAYQRQHGAPKTARKLRDIILRSDLPEWVKDAPCH
IKQNAVVEAWLAFRRSKDARFRSVRDRSHTLQFNAGNFRNGTWYPKLTRG
LAFRASEEMPREWARGTELMRVKDRWYAIFPEPVNEQCSLAKGVVALDPG
VRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSRLSKAPRPKRRRMR
QAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKF
GSKTARAMLTWAHYRFKQLLKFQAKKKNVVVVEVSEAYTSKTCTKCGHIH
TKLGGAKVFRCPKCNHRLPRDWQGALGVMLRALRDTAFLFGLRPSSAVAS
ASRSDNGNGQNAIASPLSSNA
>CYA_1375 ISSoc2, transposase
MTITFLPNRNWLRISSPSCTASAVGSTDSENTGLQSRKIRIYPEPALAKV
WKRWQAACRYCYNQAIAYQRQHGAPKTARKLRDIILRSDLPGWVKDAPCH
IKQNAVVEAWLAFRRSKDARFRSVRDRSHTLQFNAGNFRNGTWYPKLTRG
LAFRASEEMPREWARGTELMRVKDRWYAIFPEPVNEQCSLAKGVVALDPG
VRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSRLSKAPRPKRRRMR
QAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKF
GSKTARAMLTWAHYRFKQLLKFQAKKKNVVVVEVSEAYTSKTCTKCGHIH
TKLGGAKVFRCPKCNHRLPRDWQGALGVMLRALRDTAFLFGLRPSSAVAS
ASRSDNGNGQNAIASPLSSNAQQCSA
>CYA_2146 serine/threonine protein kinase
MDSPGAVSRRTRTTKSIHDSYQILGLAGQGQYGRVFCARPRHGGDLVALK
ELPAERFPTPNLLRELRYLLTLNHPNITRCYALEHAREGRYLVLEYCEGG
TLRELIDQVERGLWLPVKQVLGFVDQILAGLDHAHRQGVIHCDVKPENIL
LKPTPQGWQLKLTDFGIARHPQPAPGEISATGSPAYMAPERFYGQFSPAS
DLYAVGIILLELLTGRRPFSGSPSQLMHAHLNQPFVCPEGIPAPLQELLE
ITLRKLPLRRFRTAAQMRSALATFAREWQEPAGCWVGPRLSRRSPPGLQV
WDLPDPGFVGEGGRESLPEQKFCICEDPSGSRSPLLLRVTPQRLEWLDLQ
TLASGAPPLACFSLAEPLQQVLPLPSFPEALAFSKSNLLHLSPARVRTLL
SFAEDWRATWLAERQELVWATAKEIGAVQWLPAGPTVAQPFPEFHCYFRW
PWQVPTGSLLRLLALSEHLVLLAGLGRQWVEMTVLPYPAAWPPQTGSQPL
RYRLPLDPRGRVLSLGERLLFAGGDGGGQGCCPHLCSVQVNPLRLRRWFL
KGWPLQMAKAPWGVLLLCREGEEFSSLWLYSEGGYPLAQVAVPVGSEVLQ
VGQRGLVWLQVPKAGKPQQFQLWQLDLNQLPANGHAAEGVALG
>CYA_1145 conserved hypothetical protein
MIEVEVHQQLRQLLRQSPEALWPHQLTMARMVARGLRLGRSTLIQVPAGG
QHRLSYLLPALMWPSATLLCATVSVQAQILGEEIPWLRQTLQLHKPVLQK
DRWPDPDFQGLLLVDPLDWLRARLRGAEMPTGIPLILDGAEDLEEWAYQA
LTVTLEASHWQQLRQIFPAEAERLSQAQVNLALQLLRRPLSRCLLQADEQ
AHLEAALSLVVSYAGWLPDPWDQLRQRLCAEGDPASRWVWWAETDRETGR
LTLYHSPAALHEWLAPIWATQPVVIIGEALDLDRQAEAYRWRLGLPDLTP
LRFSSGEDWIRSGGEPLPSLSLYLPRLPLPNSPLFREHLLQELRSLIPQV
QGFVVVLVSDQPLQVQVGAALAAEFGSRVRVNSLFPGEKGILVCDWPYWL
QHKASLPCPELLAIATLPFPSMEDPRVAGRVQYLQRTQQDWFRQYLLPVA
ASQLQRAVAPLRQGAEAGEASGLPTRWVAILDSRIVARSYGVALLNALGP
ALRIQQRSQLFV
>CYA_2249 ISSoc2, transposase
MTITFLPNRNWLRISSPSCTASVVGSTDSENTGLQSRKIRIYPEPALAKV
WKRWQAACRYCYNQAIAYQRQHGAPKTARKLRDIILRSDLPGWVKDAPCH
IKQNAVVEAWLAFRRSKDARFRSVRDRSHTLQFNAGNFRNGTWYPKLTRG
LAFRASEEMPREWARGTELMRVKDRWYAIFPEPVNEQCSLAKGVIALDPG
VRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSRLSKAPRPKRRRMR
QAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAQMVAKAGRKF
GSKTARAMLTWAHYRFKQLLKFQAKKKNVVVVEVSEAYTSKTCTKCGHIH
TKLGGAKVFRCPKCNHRLPRDWQGALGVMLRALRDTAFLFGLRPSSAVAS
ASRSDNGNGQNAIASPLSSNAQQCSA
>CYA_2343 ISSoc1, transposase, truncation
MNAASPYIPPYTGGLGGGGIRERSHRPPRSKTERRWSNSWAFYQLRQFVH
YKAARAGIQVVVVPPAYSSQTCHQCFWIEQREGKHFRCVNPLCGWEGDAD
FNGANGIALLGVAVNQPPYIPPPPCPRIRGLGAGRGAVGAG
>CYA_0726 ISSoc2, transposase
MTITFLPNRNWLRISSPSCTASAVGSTDSENTGLQSRKIRIYPEPALAKV
WKRWQAACRYCYNQAIAYQRQHGAPRTARKLRDIILRSDLPGWVKDAPCH
IKQNAVVEAWLAFRRSKDARFRSVRDRSHTLQFNAGNFRNGTWYPKLTRG
LAFRASEEMPREWARGTELMRVKDRWYAIFPEPVNEQCSLAKGVIALDPG
VRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSRLSKAPRPKRRRMR
QAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKF
GSKTARAMLTWAHYRFKQFLKFQAKKKNVVVVEVSEAYTSKTCTKCGHIH
TKLGGAKVFRCPKCNHRLPRDWQGALGVMLRALRDTAFLFGLRPSSAVAS
ASRSDNGNGQNAIASPLSSNAQQCSA
>CYA_2846 ISSoc4, transposase orfB
MIAIDQTAVWEGMERRVSRSLRGQRAYHYRQRYKGEKYTVIGAISLRGVV
GCRVIKGGMKKGDFLEFLRSELCLKLDARKVVIMDNLNIHKSREVEELIR
GTGARILYLPVYAPELNPIEMMWSVLKHFIRQLCRIGKYSMEQIVKTSLL
LINPSSFRSWFAKCCYCTP
>CYA_0053 ISSoc4, transposase orfAB
MPTHSLDLRQRVVAAYQAGNTSIRQVAKRFMVTKRTVHRWVRQYQQTQDL
APKKAGTKRVGILEQHRQEVMAIITEHPDFYLWQYQELLRERLGINVSIV
TIHNFLKKQGMTLKKKTYRSAKVKEEEVKRERLAYSQEVRNIPAEDLIAI
DQTGVWEGMERRVSRSLRGQRAYHYRQRYKGEKYTVIGAISLRGVVGCRV
IKGGMKKGDFLEFLRSELCPKLDARKVVIMDNLNIHKSREVEELIRGTGA
RILYLPVYAPELNPIEMMWSVLKHFIRQLCRIGKYSMEQIVKTSLLLINP
SSFRSWFAKCCYCTP
>CYA_2581 ISSoc3, orfB transposase
MIITYEYRILPSDDQAALMTEWLELLRRQWNDALGQRLDWLTATRCPIDR
CSLVSCPLPVSEAPLEPNYYRQAGSLKQIKQLFPAYRGIYAEVLQQNLMR
LDKAWKAWQVPDSTGKRRGRPRFKKAGELRSFTFPRINCPKAGAHLEGET
LRLSKIGSMPVVLHRPLPEGFAPKTCTVVRKADGWYVCISLEDKSVPLPE
PVPIKKAVGIDVGLDRFLTTSDGEVVPIPRHYRRAQKHLARQQRQLSRKV
KGSANWKRQATKVACLQLHVARQRKAFHYQVAHWLVGQYDLLVVEDLNVR
GLARTRLAKSILDAAWGQFLDILTAVAVKRGKQVLRVDPRGTSQNCCVCE
ERVPKALSERVHDCPRCGSWDRDLNAAIEILKRGLRAVGLPLSGCGGSWF
TSPLKQQLREVILGSSRLQPVRA
>CYA_0373 serine/threonine protein kinase
MNQRLIGQLIGNRYRLTHHISEGGYGNVFEAVDTQLNDEPVAVKLLRPPP
PDMEPEYYQQLQQRFLDEARVSALLGEHPNIVQVRSYGLYQNQPYLVMEY
LKAKPYTGQGLDYVLAREGPLHPERVVNLALQICSALHHAHNFHMDLGKH
SIRGVIHRDIKPSNIFVQKGPDGKERVKLLDFGISKLMGETSRGLTQTGY
FLGTMVYASPEQMRGEKLDGRSDIYSLGVVLYELLTGALPFEPETDTLQG
WYHVHNFQKPRPFQDHPLPHPIPEALEKVVLRCLEKDPALRPATMEELAQ
QLRAVYGDKIPPPPQKAPLQRIPAGFGQQATQQSRAAPVSEAEEEELQRA
VRLIEAGEYKMAVHLLNKLIQSAPNEARYYLYRGLAHQRQGHWGLAQMDY
QGVLRLEPGNPSAEQGLREVEQQVGQEQVSPHQKPTLPTSGKPRQRKGLA
LGWLLANWAAAGIGYLGLGAAAPLLAALGSLQGAVAGAGLGLGMGLLQWA
VLRRQVSWRWVAATLLATALGWVAADTLEAGMATFAFDPRDPWLQNALQA
MASPLRGLLVGLGVGGLQGILLSRHGKVAWAWVLAAGVEGGGAALLIHWL
LAGSALSRWLLLLAGLLAHTRPLSALVLANLNWRRIPAVQNCQQAKQQAA
>CYA_0708 conserved hypothetical protein TIGR00252
MPKRTSLQNMGEAGEACVRQYLEEQGWQILAQQWRCRWGELDLVASRAGE
LIFVEVKTRSGQGWDQKGLLAVGIQKQQRLIRAAQAFLSQHPDLAELACR
FDVALVEQRPGKEGVSYALADYLQGAFELWE
>CYA_1291 ISSoc4, transposase orfA
MPTHSLDLRQRVVAAYQAGNTSIRQVAKRFMVTKRTVHRWVRQYQQTQDL
APKKAGTKRVGILEQHRQEVMAIITEHPDFYLWQYQELLRERLGINVSIV
TIHNFLKKQGMTLKKRPTAVQKSKKRRCKGND
>CYA_1938 ISSoc2, transposase
MTITFLPSRNWLRISSPSCTASAVGSTDSENTGLQSRKIRIYPEPALAKV
WKQWQAACRYCYNQAIAYQRQHGAPKTARKLRDIILRSDLPGWVKDAPCH
IKQNAVVEAWLAFRRSKDARFRSVRDRSHTLQFNAGNFRNGTWYPKLTRG
LAFRASEEMPREWARGTELMRVKDRWYAIFPEPVNEQCSLAKGVIALDPG
VRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSRLSKAPRPKRRRMR
QAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKF
GSKTARAMLTWAHYRFKQLLKFQAKKKNVVVVEVSEAYTSKTCTKCGHIH
TKLGGAKVFRCPKCNHRLPRDWQGALGVMLRALRDTAFLFGLRPSSAVAS
ASRSDNGNGQNAIASPLSSNAQQCSA
>CYA_2425 ISSoc2, resolvase
MARYVKPREAADYFGVCLHTLRRWEQKGWIKAIRTPSGRARRYDLDSYIR
TPKKAKRVVLYARVSSRGQKSDLERQIARLVNLYPGAEVVGEVGGGLDFK
RPKFLALLERVRAGDIGTIVVAHRDRLCRFGFELVEWYCRQYGCEILVLD
DDHLSPQQELVEDILTILHCFSSRLYGLRKYRAAIEKDTDLSGASAG
>CYA_2005 staphylococcal nuclease domain protein
MASRTSLLMMAAVLSGSWFVLPAAAQSSGTARVRSVVDGDTFWADLNGRP
TRFRLAYVDAPELTQGRWGRLSQEALQSLLPPGSLVQVDTLYVTPEGLHI
AQVYNAEGLVNLEMLRQGQAVVYERFLYGANRERYLEAQELAQAARRGFW
QQRNPVMPWEFRETAAQTSAFAGSNVLDGSFLRENPAAAAGVGIATAVVM
VGLSKLLWRKPSRQRVSIRQMERDLKQLQRSLATTLASRKQLERQYDQLL
QKAEDWFVRAQKASQHDQDELARQALVQRNQHMSAAEAVRKSLDEVEAQA
ATLREGISRLESQIALAKLEREMNN
>CYA_0156 ISSoc3, orfA transposase
MVVAGQDPVLVGDNHETVLAFSAMSYNIGHRSVYSLQIHLVLVTKYRRRV
ITAPMLQRLEDIFRATCQKWRCSLVEFDGEADHVHLLVSFPPDVQVSKLV
NNLKTVSSRLIRKEFATEVARFYSKPVFWTGAYFVASCGGVTVEELKKYV
EQQASPR
>CYA_2355 ISSoc3, orfA transposase
MVVAGQDPVLVGDNHETVLAFSAMSYNIGHRSVYSLQIHLVLVTKYRRRV
ITAPMLQRLEDIFRATCQKWRCSLVEFNGEADHVHLLVSFPPDVQVSKLV
NNLKTVSSRLIRKEFATEVARFYSKPVFWTGTYFVASCGGVTVEELKKYV
EQQATPRL
>CYA_2069 conserved hypothetical protein
MLKCTTRHVHIFAGEVTADNHFVPRDDLLTLDVDPDNELVWNDAALQKVY
ARFEELVEEYRGRDLTEYNLRRIGSDLEHFIRSLLKQGEIAYNLQGRTPN
YSMGFPQIPAEEIVGQYIPKG
>CYA_0998 ISSoc4, transposase orfB
MQRERLAYSQEVRNIPAEDLIAIDQTGVWEGMERRVSRSLRGQRAYHYRQ
RYKGEKYTVIGAISLRGVVGCRVIKGGMKKGDFLEFLRSELCPKLDARKV
VIMDNLNIHKSREVEELIRGTGARILYLPVYAPELNPIEMMWSVLKHFIR
QLCRIGKYSMEQIVKTSLLLINPSSFRSWFAKCCYCTP
>CYA_2582 MutS2 family protein
MPTPTTFNLLPICSEPDPSLRQETLELLEWPRLCQHLASFAATPLGRRAC
LELDPWRSRAESEVCLDQTEEAIRLDCSQPGGISLDGIHNLLPALERAER
GGILSGEELVQIATTLGAARRLRRLIDADERLPRLQEWVSNLRTYPELEQ
EIFRCLDEHGEVRDSASAALADLRRQHRQYRSQIQERLQQVMSQHPQALQ
DTLIGQRQGRFVLMVKATHRDLIRGIVHDSSASGATLYVEPYAVVELGNR
LRETQAQIQAEEERILAALSAQVGSVAEDLEHLQAVMVGLEVALARARYS
LWLGGNRPQFVPAGLRLRQARHPLLLWQSREEGKGPEVIPIDFTLSESIR
AVVITGPNTGGKTVALKTLGLLVLMAKAGIFLPAQDPPQLPWFDGVYADI
GDEQSLQQSLSTFSGHIRRISRIVQALQSEPAPALVLLDEVGAGTDPSEG
AALAAGLLEYLAEKALLTLATTHYGELKALKYQHPGFENASVEFDEATLA
PTYRLLWGIPGRSNALAIARRLHLEPEILRRAQQHLQGESQVDKVIAGLE
AQRAQLEERAAQVGSLHQELETLYRQMQQRSRQMAEREAQLEYRQQQGLQ
ALLAAARREVAAAVRKLQQGDDPQQVAAELEQIRRRYSPPPPPVETEFVP
EVGDRVRLRGLGQTGEVIAVEGEVYVVRSGILKFTVPRGQLDPIDEHQAK
QRQRPKAPPSPPPTTAPLNLRTSRNTLDLRGKTVADAEAILEQHFAQAPP
GPVWIIHGHGTGRLRAGVQAYLQNHPRVQRFAPADPQDGGTGVTVAHLR
>CYA_0042 WD domain, G-beta repeat protein
MVGQTLAGRYQILEELGSSGQTYLAQDGHCPEQSWVVIRRWQPRSPKGEE
PSAARQRFQQAMALRERLGSHDAIPRLLAYFEEEGGFYWVEEWIQGQTLE
QALRQTTEQGQLWSEVEVRAFLQDVLQTLAFLQGEGVSHGNLRPSCLLCR
QSDGRWMVLGLGQAMASAGSGLEASSAGGDLDALGLLALQALSGIPTHKL
FRDPLTGELRWHDLAPTSAPFAAFLDGLVGCDPRQRFASAAAALAALQAL
SLAEGVSPGAEILPDPVAVDPWQEPTTPPRSPVSLRARFWIPPLWAGSSL
AALLVLFGVAAWQLAANLSRWGEKAVVPRDSVPPAGTMANLGSAGPNSFS
FTEQPPNPSKTGSPALDLADWAKSLRLKAKLEGPAAITALAISPDGNLLV
AGGDDGVIRFWDPQAGQLLQSWTGHEGSIETLAISPDGTFLVSGGADKTV
RVWDLAALGDPALRSGEGVPRLQLQGHTDLINSVAISPDGRWIASGSADR
TIRLWQAEDGQLVRTIDSAAYPVTQGAGITAVAFAPSGLAEEGSSPWILV
AANGNPAVYLWDPRSGALLKTLEADYPIEQVLLSPDGRHLLAASASGIWI
WNVGTGSRERTLPQPLSGLATLALSPDGRLLASSTDHRAQQIKLWDLRSG
KELRTLGGQTWMVSALLFGPDGQTLLSGGADGAIRIWGPEHPASEAEKGT
QP
>CYA_2163 hydrolase, NUDIX family
MLTDAAYGVIPILPLPPAQGSHLYLLIQHQKGHWAFPKGHKDEGESDLAA
AQRELREETGLTDYQLLTLPGQPGPLTLQEAYTFIDPEGNAVAKTVTYYV
ALLPPQFPPPELQVQPEEVAAYRWCSYPEALEQISFEESRQLLRRCQAHL
EQLWKLEKT
>CYA_1438 ISSoc2, transposase
MTITSLPSRNWLRISSPSCTASAVGSTDSENTGLQSRKIRIYPEPALAKV
WKRWQAACRYCYNQAIAYQRQHGAPKTARKLRDIILRSDLPEWVKDVPCH
IKQNAVVEAWLAFRRSKDARFRSVRDRSHTLQFNAGNFRNGTWYPKLTRG
LAFRASEEMPREWARGTELMRVKDRWYAIFPEPVNEQCSLAKGVIALDPG
VRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSRLSKAPRLKRRRMR
QAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKF
GSKTARAMLTWAHYRFKQFLKFQAKKKNVVVVEVSEGYTSKTCTKCGHIH
TKLGGAKVFVCPRCGRKLPRDWQGALGVMLRALRDTAFLFSNGQNAIAAP
LSSNAQQCSA
>CYA_2253 uracil-DNA glycosylase, family 4
MPIPPGTYRELEQLEQHCRVCQRCELAANRTHVVVHRGNPKARILIIGEG
PGEQEDLQGLPFVGKSGQLLDKILASVGLDSERDTYICNVVKCRPPNNRV
PTQEEMDACRPYLLEQIRLVDPWIILLTGATSVRSLLGDKRGITKIRGEW
IQWQGRWCMPIFHPAYLLRNPDRTPGSPKWLMWQDIQAVKQKYLELAGAT
PPQPDF
>CYA_2780 hydrolase, TatD family
MDTHVHLNYPDFAEDLPQVAERWRQAGIQQLVHSCVTPAEFPQLQAIADQ
YPEVFLSVGLHPLEARQWQPDLAEKIAQLAAGDPRVVAIGETGLDFYKSD
PADVERQTESFRAHIALAQEQDLALIVHCREAAAATYEILREAMAARGPL
RAVMHCWSGSPEETRLFVELGCFISFSGIVTFKNAETVRRSAQEVPLSQL
LVETDCPFLAPTPFRGKRNEPAHVQRVAQTLAELLQIPLQDLARQTSQNA
ARLFRLPQPPL
>CYA_2135 hydrolase, NUDIX family
MHTPSQILRERLRFQGHKYTFVSQRLRFPNGTEGEREYLLHPGGVVAVPV
TAEGKFVCIRQYRFAVAAYLYEFPAGTVEPGEHPDETIRRELEEETGLRA
HRWDPLGQFYLCPGYSSEIMYAYLARDLEVLDAPPAKDEDEDIAVVELSP
AELTEMARFGLDFDSKSITCFWRAQLFLAAENAAFASRNKP
>CYA_0596 ISSoc2, transposase
MTITFLPNRNWLRISSPSCTASAVGSTDSENTGLQSRKIRIYPEPALAKV
WKRWQAACRYCYNQAIAYQRQHGAPKTARKLRDIILRSDLPGWVKDAPCH
IKQNAVVEAWLAFRRSKDARFRSVRDRSHTLQFNAGNFRNGTWYPKLTRG
LAFRASEEMPREWVRGTELMRVKDRWYAIFPEPVNEQCSLAKGVIALDPG
VRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSRLSKAPRPKRRRMR
QAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKF
GSKTARAMLTWAHYRFKQLLKFQAKKKNVVVVEVSEAYTSKTCTKCGHIH
TKLGGAKVFRCPKCNHRLPRDWQGALGVMLRALRDTAILFSSGQDAIAAP
LSDNA
>CYA_0158 ISSoc3, orfB transposase
MIITHEYRILPSDDQAALMTEWLELLRRQWNDALGQRLDWLTATRCPIDR
CSLVSCPLPVSEPPLEPNYYRQAGSLKQIKQLFPAYRGIYAEVLQQNLMR
LDKAWKAWREPDSTGKRRGRPRFKKAGELRSFTFPRINCPKAGAHLEGET
LRLSKIGSMPVVLHRPLPEGFVPKTCTVVRKADGWYVCITLEDKSVPSPE
PVPIKKAVGIDVGLDRFLTTSDGEVVPIPRHYRRAQKHLARQQRQLSRKV
KGSANWKRQATKVACLQLHVARQRKAFHYQVAHWLVEQYDLLVVEDLNVR
GLARTRLAKSILDAAWGRFLDILTAVAVKRGKQVLRVDPRGTSQNCCVCE
ERVPKTLSERVHDCPRCGSWDRDLNAAIEILKRGLRAVGLPLSGCGGSWF
TSPLKQQLREVILGSSRLQPVRA
>CYA_2684 ISSoc2, resolvase
MARYVKPREAADYFGVCLHTLRRWEQKGWIHAVRTPSGRARRYDLDSYIG
LRPADANRAPKKDKRVVLYARVSSRGQKPDLERQIARLVDLYPGAEVVGE
VGGGLNFKRPKFLALLERVRAGDVGTIVVAHRDRLCRFGFEFVEWYCRQY
GCEILVLDDDHLSPQQELVEDILTILHCFSSRLYGLRKYRAAIEKDTDLS
GASAG
>CYA_1060 putative methylated-DNA-[protein]-cysteine S-methyltransferase
MAQSVSLYQRFYEVVRRIPPGRVATYGQVARLAGCPGYARQVGYALFRLQ
GQETDIPWHRVINAQGRISYSPFRLGYDDLQKVLLQAEGIPFDAEGRVDL
QQFGWDPREA
>CYA_0345 ISSoc2, transposase
MTITFLPNRNWLRISSPSCTASAVGSTDSENTGLQSRKIRIYPEPALAKV
WKRWQAACRYCYNQAIAYQRQHGAPKTARKLRDIILRSDLPGWVKDVPCH
IKQNAVVEAWLAFRRSKDARFRSVRDRSHTLQFNAGNFRNGTWYPKLTRG
LAFRASEEMPREWARGTELMRVKDRWYAIFPEPVNEQCSLAKGVIALDPG
VRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSRLSKAPRSKRRRMR
QAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKF
GSKTARAMLTWAHYRFKQFLKFQAKKKNVVVVEVSEAYTSKTCTKCGHIH
TKLGGAKVFRCPKCNHRLPRDWQGALGVMLRALRDTAFLFGLRPANAVAS
ASRSNNGNGQNAIASPLSSNAQQCSA
>CYA_1236 conserved hypothetical protein
MLMGFDPGRDKCGLAVVQVQPAWQVLHREVVSAGEALARLQALWQQFGAE
RLILGNQTTARGWKRQLESLLPPQQIVLVDERHSSEEARRRYWDFYPPRG
WERLLPKGMRVPDKAYDDLVALILVERYWRGQARAEPT
>CYA_0012 hypothetical protein
MIDLQLQDWWSRQRLTQLSYPNLSLSGASVSLRVILEPFKNVGAIWYSKI
YGEYQDNVLLLACSPDLEGLSDRVRCLEQSPIQKLCRENFSKHFTEYLLT
DAVAYELEIRFEGKDFLVVDQERLGNRVVHQIYIHDNCFFKPVEDDLLSK
IIGCVLEQHSFYLGQEIDWSEISARLTDHLLTSSKIEIQSDPKRQHVWIP
QLEEKSILSDPFFKKLSARAQWLLKADKPVLERKKPLPEGFASI
>CYA_0091 ISSoc1, transposase
MAQVLTISCKLKVSVSQAAKLDATLDAFAKALNCVNENTPEKIVNAVKLQ
SLCYREIRTRFGLSSNLAQQVCRRLAGARKVAQQKNRPVKAFKSGFVTYD
ARIFSFREKDWTVSLTTVEGRERFELDIGHYQRGLLAGSNPKAATLVKRQ
GGSYSIQIGVESEVPEPEHAVKAIGVDLGRRDIAHTSEGDNWNGQQLNQV
RDHYSRLRGVLQRKASKGTRSTRRRCQQLLQRLSGRERRFQTWVNHCISK
SIVARALATHRFIALEDLTGIRERVNRQPRSKTERRRANSWAFYQLRQFV
HYKAMRAGVKVVVVSPAYSSQTCHQCLWIGQREGKHFRCVNPACGWEGDA
DLNGANGIALLGVAVNQPPSIPPPPCPRIRGVGGLEGGAVGAG
>CYA_1860 conserved hypothetical protein
MTLEQVNLSASALALLDYCPRLFCYVYLERLIWPAADAFEHEAEQQRGRQ
FHRLVESYSRGLQVEPRLSALEETVRQWWQVFLASPHAQPQGRVLAELPL
WQRIEGFKLMARLDRLVIAPGSLHIVDWKTERQRPPDEQLAQDWQVRLYP
LLLCGVAAQLPLAGPFEPEQVQLTFWYVQHPQQPFQLRYSAAAYERDLAH
LKATLGRLRQLEAQAFPALPYGERCASCLFCARCHGLMPPGIPSQNLTDW
VWPEAEPLEETPEAEWL
>CYA_1646 ISSoc2, transposase
MTITFLPNRNWLRISSPSCTASAVGSTDSENTGLQSRKIRIYPEPALAKV
WKRWQAACRYCYNQAIAYQRQHGAPKTARKLRHIILRSDLPGWVKDAPCH
IKQNAVVEAWLAFRRSKDARFRSVRDRSHTLQFNAGNFRNGTWYPKLTRG
LAFRASEEMPREWARGTELMRVKDRWYAIFPEPVNEQCSLAKGVVALDPG
VRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSRLSKAPRPKRRRMR
QAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKF
GSKTARAMLTWAHYRFKQFLKFQAKKKNVVVVEVSEAYTSKTCTKCGHIH
TKLGGAKVFRCPKCNHRLPRDWQGALGVMLRALRDTAFLFGLRPSSAVAS
ASRSNNGNGQNAIASPLSSNAQQCSA
>CYA_1439 ISSoc2, resolvase
MARYVKPREAADYFGVCLHTLRRWEQKGWIHATRTPSGRARRYDLDSYIR
APKKDKRVVLYARVSSRGQKSDLERQIARLVNLYPGAEVVGEVGGGLDFK
RPKFLALLERVRAGDVGTIVVAHRDRLCRFGFEFVEWYCRQYGCEILVLD
DDHLSPQQELVEDILTILHCFSSRLYGLRKYRAAIEKDTDLSGASAG
>CYA_1126 ISSoc4, transposase orfA
MPTHSLDLRQRVVAAYQAGNTSIRQVAKRFMVTKRTVHRWVRQYQQTQDL
APKKAGTKRVGILEQHRQEVMAIITEHPDFYLWQYQELLRERLGINVSIV
TIHNFLKKQGMTLKKRPTAVQKSKKRRCKGND
>CYA_2158 ISSoc1, transposase
MSQVLTVSCKLKVAQSQAAKLDATMEAFGQALNWVNQNTPEKIVNAVKLQ
SLCYYEIRARFGLSSNLAQQVCRRVAGARKVARQRNRPVKEFKRGFVTYD
ARIFSFREKDWTVSLTTVEGRERFELAIGNYQRGMLAGSNPKSATLVQRK
DGSYYIQICVEKKPPKQQDTDKVIGVDLGRTDIAHTSEGDNWNGQQLNRV
RDHYSRLRAVLQRKASKGTRSSRRRCRELLQRLSGKERRFQVWVNHRISK
AIVSRAKATNSAIALEDLTGIRERVNQQPRSKAERRRTNSWAFYQLRQFL
EYKARVAGVSLILVPPAYTSQTCHKCLHIHPDPAQSYRNGKSFKCGHCGW
EGDADLNGANVIALLGAVVNQPRGPGLFCSLVEQNRLRATESPLRTA
>CYA_2424 ISSoc2, transposase
MTITFLPNRNWLRISSPSCTASAVGSTDSENTGLQSRKIRIYPEPALAKV
WKRWQAACRYCYNQAIAYQRQHGAPRTARKLRDIILRSDLPEWVKDVPCH
IKQNAVVEAWLAFRRSKDARFRSVRDRSHTLQFNAGNFRNGTWYPKLTRG
LAFRASEEMPREWARGTELMRVKDRWYAIFPEPVNEQCSLAKGVVALDPG
VRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSRLSKAPRPKRRRMR
QAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKF
GSKTARAMLTWAHYRFKQLLKFQAKKKNVVVVEVSEAYTSKTCTKCGHIH
TKLGGAKVFRCPKCNHRLPRDWQGALGVMLRALRDTAFLFGLRPSSAVAS
ASRSDNGNGQNAIASPLSSNAQQCSA
>CYA_0707 conserved hypothetical protein TIGR00250
MSTDLNYSATRDPFSALGLDVGNRRIGVAGSDGLGLLATGLGVIRRRSLP
EDIAQVQAWIRRRQATVVVVGIPLLADGSVGSQARKVQRFVRALQAAVDL
PVVTVNEYLSTVQAEWDLRQAGIPAKAQKALIDQQSAAVILQTWLDERRY
SQSSKAPCR
>CYA_2640 ISSoc3, orfA transposase, interruption-C
MLQRLEDIFRATCQKWRCSLVEFNGEADYVHLLVSFPPDVQVSKLVNNLK
TVSSRLIRKEFVTEVARFYSKPVFWAGTYFVASCGGVTVEELKKYVEQQA
TPRL
>CYA_1604 ISSoc4, transposase orfAB
MPTHSLDLRQRVVAAYQAGNTSIRQVAKRFMVTKRTVHRWVRQYQQTQDL
APKKAGTKRVGILEQHRQEVMAIITEHPDFYLWQYQELLRERLGINVSIV
TIHNFLKKQGMTLKKKTYRSAKVKEEEVKRERLAYSQEVRNIPAEDLIAI
DQTGVWEGMERRVSRSLRGQRAYHYRQRYKGEKYTVIGAISLRGVVGCRV
IKGGMKKGDFLEFLRSELCPKLDARKVVIMDNLNIHKSREVEELIRGTGA
RILYLPVYAPELNPIEMMWSVLKHFIRQLCRIGKYSMEQIVKTSLLLINP
SSFRSWFAKCCYCTP
>CYA_2012 putative transposase, truncation
MQRAVSRKKKGSNRYKKAVKRLSKAHQKVANQRKDFHYKTAKELLSRGKH
IAHEALTIGGLARTRLAKSIYDAGWGQFLQILKVKAERAGLLTIAVNPNG
TSQECSGCGQVVPKKLHERWHDCPYCGLRLSRDHNSARVIKSRAVGHPVL
KARKTSYAVAGVTEKPALYPFASAARSALG
>CYA_0349 UvrD/REP helicase domain protein
MRPEQQRALAYRSGPLGIAAVPGSGKTFILELLIADLILNRGVPPERIGV
FTYMRSARSNLINRINQRLQQAGYPDRFTQAFTLHSLALRVLREVPGPWE
ELSILEEYEQERLLSRLCRAWLAHHTHLWEPLIPAEKPHKVVRNRLRFRR
SFQQMVRAVISTAKNLRLGPEAIPTTTQGYLGWAAPIYAAYQAELRRLGK
LDYDDLGWQAVELIERDPALRQQVQNWYDYLFEDEAQDSSPLQEELLRLL
SQRTGNLVRVGDPNQSIMGTFTTAEPRLFRAFCQANPQVTLKESSRSAPQ
ILELANRLVDWVNQKHPIPALRTALAPQHICPASAGGLNPPASEGEVVFR
RVVGSPEQELQEVTRWALAAAQAFPDQTVAILVTTNELGGKALDYLRELG
AEQVIDLLRGNPSQRRVLLQLKGIIDWLAQPISSARLAAAVDHLADWAGI
PRLELGPMLDWIRASLPERLLFPQFGEAPTLPDSPSWQNLGRLLRILAGW
LRAGRSPWPEVLNVIVQSLYRKPEELFVGCYVIDQLEQVLGSLPEVDWQE
IAQELRVILDRRLNNLPSEIFAFNPEPGSITVTTLHRAKGLEWDQVFIPQ
VSAYEFPTYSEERPVGLRFLEDVDMRAEALAQLRQLSRRSCWEQQADSAT
EQAFLDLAAERLRLLYVGITRSKRRLTLSVSSQSRFGEEQSASLVFRVLS
RPCEAS
>CYA_2710 ISSoc4, transposase orfB
MQRERLAYSQEVRNIPAEDLIAIDQTGVWEGMERRVSRSLRGQRAYHYRQ
RYKGEKYTVIGAISLRGVVGCRVIKGGMKKGDFLEFLRSELCPKLDARKV
VIMDNLNIHKSREVEELIRGTGARILYLPVYAPELNPIEMMWSVLKYFIR
QLCRIGKYSMEQTVKTSLLLINPSSFRSWFAKCCYCTP
>CYA_1773 ISSoc2, transposase
MTITFLPNRNWLRISSPSCTASAVGSTDSENTGLQSRKIRIYPEPALAKV
WKRWQAACRYCYNQAIAYQRQHGAPKTARKLRDIILRSDLPGWVKDAPCH
IKQNAVVEAWLAFRRSKDARFRSVRDRSHTLQFNAGNFRNGTWYPKLTRG
LAFRASEEMPREWARGTELMRVKDRWYAIFPEPVNEQCSLAKGVIALDPG
VRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSSLSKAPRPKRRRMR
QAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAQMVAKAGRKF
GSKTARAMLTWAHYRFKQFLKFQAKKKNVVVVEVSEAYTSKTCTKCGHIH
TKLGGAKVFRCPKCNHRLPRDWQGALGVMLRALRDTAFLFGLRPSSAVAS
ASRSDNGNGQNAIASPLNSNAQQCSA
>CYA_0226 ISSoc7, transposase
MLLGFCTRLELNNRQKTLAAQHAGVARHAYNWGLAICKQAVESKQKLPTA
IDLHKRLVAEVKKENPWYYQVSKCAPQQALRNLEQAFKRWRSGLGKFPRF
KRKGVRDSFYLEGSIRISGDRIKVPILGWLRCAELLPTATPKNVVISLRA
GHWYVSFKYEAPAPQVEKTGEVVGVDLGINRLATCSDGEVFENPKPYYKA
KKRLARLQRRLSRKQKGSANRKKAVAQLAKAHKRVADIRQDNLHKLTTYL
AKKYRVVVIEDLQVKNLLKNHKLAGALSDCGFYEFRRQLEYKARLYGCQV
VVADRFYPSSQLCSRCGHRQKMPLQERMFCCPCCGLELDRDLNAALNLLR
WYRTTSSSGGSDACGDPSGGVVGVNSAASHGSLKQEESSDAGQSSALFSV
A
>CYA_2082 ISSoc4, transposase orfA
MPTHSLDLRQRVVAAYQAGSTSIRQVAKRFMVTKRTVHRWVRQYQQTQDL
APKKAGTKRVGILEQHRQEVIAIITEHPDFYLWQYQELLRERLGINVSIV
TIHNFLKKQGMTLKKRPTAVQKSKKRRCKGND
>CYA_2638 ISSoc3, orfA transposase, interruption-N
MVVAGQDPVLVGDNHETVLAFSATSYNIGHRSVYSLQIHLVLVTKYRRRV
IQPVKGSRGTIAALSKPTSEGGWIDQ
>CYA_0436 ISSoc6, orfB transposase
MGYGCQQVLVRDRELLPVLEYLCQQSNKVYNCALYYARQVYFKTKRLASY
GELCAEMVRTKNKHFIAMYVSAAQQTCKSVAEALSSFKTKLKLFLQEEIS
LRPNLPRYRKKGMFTVAYPKKWLKFQEGRVRVPLGNQVKAWFGIDAFWIR
FPTNLDWKNIKELRILPRHGVFYLEWIYAKPAQPQSLDPKKVLAIDHGVN
NWLTCVSNLGHSFIIDGRKVKSFNQWYNKEVARLKTDKPQGFWSQKLERI
TEKRSRRMRDAIHKAARKVIDFCLHHSIGRIIFGWNKEQKQECGLGKVNN
QNFVLIPTGWLKERIAELCQHYGIEFIEAEEAYSSQASFLDGDELPNYGE
KPDGWRPSGKRVKRGLYQTAKGWLVNADANAAANLLKKVSRTLGLCLKEL
SRGALTTPLRVLLWTA
>CYA_2393 ISSoc2, transposase
MTITFLPNRNWLRISSPSCTASAVGSTDSENTGLQSRKIRIYPEPALAKV
WKRWQAACRYCYNQAIAYQRQHGAPKTARKLRDIILHSDLPGWVKDAPCH
IKQNAVVEAWLAFRRSKDARFRSVRDRSHTLQFNAGNFRNGTWYPKLTRG
LAFRASEEMPREWVRGTELMRVKDRWYAIFPEPVNEQCSLAKGVIALDPG
VRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSRLSKAPRLKRRRMR
QAAFRLRERIRNLVGECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKF
GSKTARAMLTWAHYRFKQFLKFQAKKKNVVVVEVSEAYTSKTCTKCGHIH
TKLGGAKVFRCPKCNHRLPRDWQGALGVMLRALRDTAFLFGLRPSSAVAS
ASRSDNGNGQNAIASPLSSNAQQCSA
>CYA_0853 site-specific recombinase, phage integrase family
MPSLSQLVGQFLQERQRDLAPASRRTYRIALEQFAKTCPVPLPQVQPSHV
QSFLNSLKGRPFRNRSGQWVHPPASPATYNLKRLALQQFFEWASQRGYFP
DPLPTQAIRPARLPARLPRDLDRLLLQRVLQRAQSHSLRYAALIRLLLEC
GLRAQELLDLTVQDFQISPEGSLLEVRCGKGSKPRAVAVGDPLSELLQQY
LSRERGPCAPTDPLFVSQSRCPAYRGRPLTYDGLRHIVLKLTEPEPGHQT
PHQFRHSFATLLLDRGVAPEHIQHLLGHTTAAMTMRYTQRANLRAAIAHS
RAILDQGLI
>CYA_0068 ISSoc3, orfA transposase
MVVAGQDPVLVGDNHETVLAFSAMSYNIGHRSVYSLQIHLVLVTKYRRRV
ITAPMLQRLEDIFRATCQKWRCSLVEFNGEADHVHLLVSFPPDVQVSKLV
NNLKTVSSRLIRKEFATEVARFYSKPVFWTGAYFVASCGGVTVEELKKYV
EQQATPRL
>CYA_1572 conserved hypothetical protein
MVYTFEIIGIAPALDFFWQQQELAKRPCRVEYLGTRPCTLDALLGSLEEV
PARRGWDLDQLIEAVIRFWCNNPDLVSLWRSRFQDAGEDVLLISRVGPIQ
SLQQEFEWLLNQ
>CYA_1181 ISSoc7, transposase
MLLGFCTRLELNNRQKTLAAQHAGVARHAYNWGLAICKQAVESKQKLPTA
IDLHKRLVAEVKKENPWYYQVSKCAPQQALRNLEQAFKRWRSGLGKFPRF
KRKGVRDSFYLEGSIRISGDRIKVPILGWLRCAELLPTATPKNVVISLRA
GHWYVSFKYEAPAPQVEKTGEVVGVDLGINRLATCSDGEVFENPKPYYKA
KKRLARLQRRLSRKQKGSANRKKAVAQLAKAHKRVAGIRQDNLHKLTTYL
AKKYRVVVIEDLQVKNLLKNHKLAGALSDCGFYEFRRQLEYKARLYGCQV
VVADRFYPSSQLCSRCGHRQKMPLQERMFCCPCCGLELDRDLNAALNLLR
WYRTTSSSGGSDACGDPSGGVVGVNSAASHGSLKQEESSDAGQSSALFSV
A
>CYA_0956 D12 class N6 adenine-specific DNA methyltransferase
MSDLLLPRPFLKWAGGKTQLTDALLERMPVYFRTYHEPFVGSGALFFRLY
RECKIKQAILSDINAELIDTYLAIRDHVWEVIQLLSEFPHNESFYYQIRE
KDPWSMGLVGRAARMIYLNKTGYNGLYRVNRQGKFNVPFGRYKAPKYLDK
DNLLAASLALQNVEILCVPFDTVVERAKPGDWVYFDPPYVPVSQTSNFTS
YHASGFGLEDQERLRDICIDLSKNKVYIMLSNSDTAIIRSLYAMPFFAID
EVQANRAINCKGTKRGKITELVITNYPVERAVQLGLLDQGLPYLRATQHS
LAPAVTPLRFAGQVRS
>CYA_0877 CRISPR-associated RAMP protein, SSO1426 family
MFDVFKNRLEITGTLTTVTALHIGVGRSTEPIGSDLPVLKDALGRPLIPG
SSLKGALRSRLESFLRGIDPALARDPSELTGSEQVRVVNQIKNTYKDDDA
TLTQKLIEATDWVSQVFGSPWLAGKVQIRDLPVVREAWFGQYQERDGVAI
DRDTETAAEGKLYDFQVVPANTPFQFHAVVENAEAWELGLLAIGLHQLET
EQIPLGGGRSRGLGVVRLEIGAVYWFDSEGDPRRLLTYLQELVAGSRQPL
SPEEAAALRQDWVEALVAKLTAVAPVGPRS
>CYA_2046 conserved hypothetical protein
MNELYLNHPTFGLLYGLCRVNEGEAIFTTLYAQRLFFRVYFKPPADDDPS
AVEELVFDPISRNEARQVLEEQMRLLRRANRKDELEHLQLVYKRTFS
>CYA_1179 conserved hypothetical protein
MGWAGSGLTQACVDRYLDLLRAGSDPGRILFLVRSQRQAEGVLRRLQQLS
SSWVGPWRIETFLQRVGRSLADHWPQVCERVPQLPRSFEPIPLAKDLAQF
LCGRACALCPRHGEVFADLGLEEFQIWDQISSAAYIAGASGLAAEAVGSR
LAAAWPAEGDPGRAEALQAMGCCVERLWEVGLRLGSLDFGLQIRLFGEHI
LPLAEFWQEWDHLIVDQAEDSCGVALEFYRQGQAHLQSQFFSYTIGGGVS
LTGIPEAVARFLRENTQVQLLEGSYRGSAGMIRLGLQIARVLDPRFDHPL
TEPLAERLPRVQVLEGETQFAAVEAMVTQIRQLLRAGIPASRIAVLLPRM
DAGVSLSLQEQLPEVLPIAPFPALIRYPLVRALLTAAEVAHPEWGAFPTL
PAWRLLLGRVLDLDPIRAALLAEDTLDPVGRSLRPKTAVRQPERVGFANL
ERYQKLLDWLRSYRGGPSLAAFFQRFFAEHLAQGMDLPQDQELLQALIDA
AQRFRRAFPAEEDRAFLAMIRSGQTPSNSRFEPDYSRYLVVATPVAYINR
GLQADYQFWFDITNPLWSRSLWRVLYNSRVLTPEWDGEVFNAAQDLQARH
QILARTLLNLCCRTRKGLWLVRSTFNYRGEENTGMLDYLILKAAKAMATA
>CYA_1137 ISSoc3, orfA transposase
MVVAGQDPVLVGDNHETVLAFSATSYNIGHRSVYSLQIHLVLVTKYRRRV
ITAPMLQRLEDIFRATCQKWRCSLVEFNGEADHVHLLVSFPPDVQVSKLV
NNLKTVSSRLIRKEFATEVARFYSKPVFWAGAYFVASCGGVTVEELKKYV
EQQATPRL
>CYA_1913 ISSoc3, orfA transposase
MVVAGQDPVLVGDNHETVLAFSAMSYNIGHRSVYSLQIHLVLVTKYRRRV
ITAPMLQRLEDIFRATCQKWRCSLVEFNGEADHVHLLVSFPPDVQVSKLV
NNLKTVSSRLIRKEFATEVARFYSKPVFWTGAYFVASCGGVTVEELKKYV
EQQATPRL
>CYA_0881 CRISPR-associated RAMP protein
MVRLAELPQTSTSIPLKATLASALAVGSGGSSGSLADKPLLKDAYGKLLI
PGSQLKGRLRHECEKLARGLGWAICRSPDPERMCPKREGIDGHFDRPEYQ
VEGYAGSHCLVCQIFGNPALPSRLWVADLVCEVPPAALEATLRPGVTLNR
RRRTAEDQRLYLIETSPAAELIFSGSLQLLPDCPPWGKALLRVALHHIGA
LGGSKSAGLGWLHWDPQSLAALQPNDADWAFLAGGGS
>CYA_2587 ISSoc3, orfA transposase
MVVAGQDPVLVGDNHETVLAFSAMSYNIGHRSVYSLQIHLVLVTKYRRRV
ITAPMLQRLEDIFRATCQKWRCSLVEFNGEADYVHLLVSFPPDVQVSKLV
NNLKTVSSRLIRKEFATEVARFYSKPVFWTGAYFVASCGGVTVEELKKYV
EQQATPRL
>CYA_2721 ISSoc3, orfA transposase, interruption-N
MVVAGQDPVLVGDNHETVLAFSATSYNIGHRSVYSLQIHLVLVTKYRRRV
IQPFNLK
>CYA_2709 ISSoc4, transposase orfA
MPTHSLDLRQRVVAAYQAGNTSIRQVAKRFMVTKRTVHRWVRQYQQTQDL
APKKAGTKRVGILEQHRQEVMAIITEHPDFYLWQYQELLRERLGINVSIV
TIHNFLKKQGMTLKKRPTAVQKSKKRRCKGND
>CYA_2010 ISSoc4, transposase orfA
MPTHSLDLRQRVVAAYQAGNTSIRQVAKRFMVTKRTVHRWVRQYQQTQDL
APKKAGTKRVGILEQHRQEVMAIITEHPDFYLWQYQELLRERLGINVSIV
TIHNFLKKQGMTLKKDLLQCKSQRRGGAKGTTSL
>CYA_2439 ISSoc2, resolvase
MARYVKPREAAAYFGVCLHTLRRWEQKGWIKAIRTPSGRARRYDLDSYVR
TPRKDKRVVLYARVSSRGQKPDLERQIARLVNLYPGAEVVGEVGGGLDFK
RPKFLALLERVRAGDIGTIVVAHRDRLCRFGFEFVEWYCRQYGCEVLVLD
DDHLSPQQELVEDILTILHCFSSRLYGLRKYRAAIEKDTDLSGASAG
>CYA_0620 ISSoc1, transposase
MSQVLTVSCKLKASQSQAAKLDATMDVFVQALNWVNQNTPEKIVNAVKLQ
SLCYYEIRARFGLSSNLAQQVCRRVAGARKVARQRNRPVKEFKRRFVTYD
ARIFSFRKKDWTVSLTTVEGRERFELAIGRYQREQLAGSNPKSATLVKRK
DGSYSIQICVEAEPSPPQRTDRVLGVDLGRTDIAHTSEGDNWNGQQLNRI
RDHYSKLRAALQRKASKGTRSSRRRCRELLQRLSGKERRFQAWVNHRISK
AIVSRAKATNSAIALEDLTGIRERVNQQPRNKAERRRTNSWAFYQLRQFL
EYKARVAGVSLILVPPAYTSQTCHRCLHIHPDPAQSYRSGKSFKCGHCGW
EGDADLNGANVIALLGAVVNQPRGSGLFCSLVEQNRLRATESPLRTA
>CYA_2685 ISSoc2, transposase
MTITFLPSRNWLRISSPSCTASAVGSTDSENTGLQSRKIRIYPEPALAKV
WKRWQAACRYCYNQAIAYQRQHGAPKTARKLRDIILRSDLPQWVKDVPCH
IKQNAVVEAWLAFRRSKDARFRSVRDRSHTLQFNAGNFRNGTWYPKLTRG
LAFRASEEMPREWARGTELMRVKDRWYAIFPEPVNEQCSLAKGVIALDPG
VRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSRLSKAPRPKRRRMR
QAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKF
GSKTARAMLTWAHYRFKQLLKFQAKKKNVVVVEVSEAYTSKTCTKCGHIH
TKLGGAKVFRCPKCNHRLPRDWQGALGVMLRALRDTAFLFGLRPANAVAS
ASRSDNGNGQNAIASPLSSNAQQCSA
>CYA_2250 ISSoc2, resolvase
MARYVKPREAADYFGVCLHTLRRWEQKGWIHAVRTPSGRARRYDLDSYIG
LRPADANRAPKKDKRVVLYARVSSRGQKPDLERQIARLVNLYPGAEVVGE
VGGGLDFKRPKFLALLERVRAGDIGTIVVAHRDRLCRFGFEFVEWYCRQY
GCEVLVLDDDHLSPQQELVEDILTILHCFSSRLYGLRKYRAAIEKDTDLS
GASAG
>CYA_2333 protein kinase domain/TPR repeat protein
MDDKVKPGAILRGRYEILGLLGQGGFGVTYKAVDRDTFNTPCVVKRLRPL
STDPYTLATARKLLEREAKVLNRLNNYDRVPRLLAHFEQDQEFYLVEEFI
AGHDLTHELVDGKPLSEPEVVQLLWEVLEILRHVHAHQILHRDIKPANLM
RRDFDGKLVLIDFGAVKEVGRLVSHAPGQTQVATVIGSVGYIAPEQLGGK
PQPCSDIYSVGVLAIQALTGRPPTKIRDDPRTGQLLWRDLVPVSKELAEI
VDRMICPRWQERFQSAAEVMEALRPLLPTPPEGVAPALSQLSVDQLLAMR
LVTRGQEKARQGDLQGAIADYTLAIQLDPQNGRAHSQRGSVRYKTGDWAG
AVEDFTRAIQLGGGDARTYFNRGIARYRLGNYEGAVADYTHALRLDPHWA
LAYYSRGNAYRQLDQPQQAIEDYSRALELNPEEVRAYFNRGVVRGQLGDA
QGAVADFSEVLRRDPQDTEAYFNRGVARAQLLDFQGAIEDYTQALQLDPG
HPKACYRRGLARQALGDLQGAITDFSQAIALRATQGEEPSGAVAAAQAEL
YLQRAVAYLSNNALEAALADCEQALRLNPALALAHFYRGLARQGLGDPAG
ALADFNRALELDPRLAKAYLKRGIAHLELGHLEAALADLNQAIALDASDV
GARSSRGQVHRLLGDPLAALQDYTAALERDPRNPQLYFDRGQIYFEQEDW
AAACEDFSQALQWAGQPGGPHGLDLMARIHLYRGMARQRLEDWQGALADF
TALIQEQPQASQGFALRAAVHLVLGDEEAALADLDRAIGCNRDWGLADAA
LAYRQRGDLHRQANRLQQAIADYTQVLALNPQERHALLWRALLWDQAGEI
ERALADYTQLLQLEPDPQTRLWALNNRGWAYAQQGDFAAAIRDYTQVLER
DPSHIKAHCNRALARAAVGDWQGACQDFQTALQLQGYEGRLWEEETHSLG
SS
>CYA_1661 ISSoc4, transposase orfA
MPTHSLDLRQRVVAAYQAGNTSIRQVAKRFMVTKRTVHRWVRQYQQTQDL
APKKAGTKRVGILEQHRQEVMAIITEHPDFYLWQYQELLRERLGINVSIV
TIHNFLKKQGMTLKKRPTAVQKSKKRRCKGND
>CYA_2520 Ser/Thr protein phosphatase family protein
MATSTCTFLHLADVHLGYDRYNSPERSKDFFLAFRDVVRRHAIQNPVDFV
LIAGDLFEHRQIQPGVLNQAQIVLRELKQAGIPVLAIEGNHDSRPYGVKT
SWLRYLADHGDLILLEPEAGEEGLELRPWSGGRGGYLDLPCGVRVIGSQW
YGSAAPKSIEQLAAAIRRLPPGPERVVLMFHHGLEGQIARYQGALRYRDL
LPLREAGVGYLALGHIHKSYTEEGWIFNPGSLEANSTAEWDFPRGAYRVR
WGEGPPQAELVQDYYRRPHRRISLEAKGRETPEEIAAAAIALAKGSDLPE
GGPAPMVEFRLAGQVGFAKHELDSRALQQQIQQLTGALLVLFRFEATTLE
IGSAALSLEEEGRRLQIEEKIYRDLLSSHAHYRKRSEELARLLLDLKEKI
LDEQGEAEVYAHLSGAFLGEED
>CYA_0687 ISSoc1, transposase
MTQVLTVACKLKVSQSQAAKLDATMDAFVQALNWVNQNTPEKVVNAVKLQ
SLCYYQIRARFGLSSNLAQQVCRRVAGARKVARQRNRPVKEFKRRFVTYD
ARIFSFREKDWTVSLATVDGRERFELAIGNYQRGMLAGSNPKSATLVQRK
DGSYSIQICVEAEPPKQQNTDKVIGVDLGRRDIAHTSEGDNWNGQQLNKV
RDHYCRLRASLQRKASKGTRSCRRRCRQLLQRLSGKERRFQAWVNHSIAK
RIVKTAKSLSACIGIEDLSGIRGRTNRQPRSREERRRSNSWAFYQLRRFI
EYKAVRAGVKVVVVPAAYTSQICHKCPHIHPDSAQSYRKGKQFKCGHCGW
EGDADFNGAKVIALLGAAVNQPRGSGLFCSLVEQSRLRATESPLRTALAV
GVG
>CYA_2081 ISSoc4, transposase orfB
MQRERLAYSQEVRNIPAEDLIAIDQTGVWEGMERRVSRSLRGQRAYHYRQ
RYKGEKYTVIGAISLRGVVGCRVIKGGMKKGDFLEFLRSELCPKLDARKD
LNIHKSREVEELIRGTGARILYLPVYAPELNPIEMMWSVLKHFIRQLCRI
GKYSMEQIVKTSLLLINPSSFQSWFAKCCYCTP
>CYA_1662 ISSoc4, transposase orfB
MQRERLAYSQEVKNIPAEDLIALDQTGVWEGMERGVSRSLRGQRAYHYRQ
RYKGEKYTVIGAISLRGVVGCRVIKGGMKKGDFLEFLRSELCPKLDTRKV
VIMDNLNIHKSREVEELIRETGARILYLPVYAPELNPIEMMWSVLKHFIR
QLCRIGKYSMEQIVKTSLLLINPSSFRSWFAKCCYCTP
>CYA_0807 ISSoc2, transposase
MTITFLPNRNWLRISSPSCTASAVGSTDSENTGLQSRKIRIYPEPALAKV
WKRWQAACRYCYNQAIAYQRQHGAPKTARKLRDIILRSDLPGWVKDAPCH
IKQNAVVEAWLAFRRSKDARFRSVRDRSHTLQFNAGNFRNGTWYPKLTRG
LAFRASEEMPREWARGTELMRVKDRWYAIFPEPVNEQCSLAKGVIALDPG
VRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSRLSKAPRPKRRRMR
QAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAQMVAKAGRKF
GSKTARAMLTWAHYRFKQFLKFQAKKKNVVVVEVSEAYTSKTCTKCGHIH
TKLGGAKVFRCPKCNHRLPRDWQGALGVMLRALQDTAILFSSGQDAIAAP
LSDNA
>CYA_2876 putative single-strand binding protein
MNSIVLMGEVASEPELRYTPDNLAVTSLVLRFPSLRPEEPPYQVRVASFG
ELAQRVVDTCRVGDQITVEGQLHMNVVERDGRKEKLAEITARRVHKLGSA
RVLSLTGMGESATVDSSEGGGASPAEPDDIPF
>CYA_1472 ISSoc2, resolvase
MARYVKPREAADYFGVCLHTLRRWEQKGWIHAVRTPSGRARRYDLDSYIG
LRPADANRAPKKDKRVVLYARVSSRGQKPDLERQIARLVDLYPRAEVVGE
IGGGLDFKRPKFLALLERVRAGDVGTIVVAHRDRLCRFGFEFVEWYCRQY
GCEILVLDDDHLSPQQELVEDILTILHCFSSRLYGLRKYRAAIEKDTDLS
GASAG
>CYA_0412 putative uracil-DNA glycosylase, family 4
MREKKSEALADHQPWAALQAEIVACRRCPRLVAWREAVAQQKVARFCDQL
YWGRPVPGFGDVQARLWVIGLAPAAHGGNRTGRVFTGDPSGDWLFRALRR
ARFANQPISLHREDGLQLRDCYISAVMRCAPPQNRPTAAEAKTCLGYLRQ
ELELLTQVRVILALDHNHMPWP
>CYA_2572 ISSoc2, resolvase
MARYVKPREAADYFGVCLHTLRRWEQKGWIKAIRTPSGRARRYDLDSYIG
LRPADANRTPKKAKRVVLYARVSSRGQKPDLERQIARLVNLYPGAEVVGE
IGGGLNFKRPKFLALLERVRAGDIGTIVVAHRDRLCRFGFEFVEWYCRQY
GCEILVLDDDHLSPQQELVEDILTILHCFSSRLYGLRKYRAAIEKDTDLS
GASAG
>CYA_2628 putative ATP-dependent DNA helicase RecQ
MALQDWQQVQSALKQYWGYEALRPPQDQVIRALLEKRDALVVLPTGFGKS
LCFQLPALLQTGLTLVVSPLIALMEDQVQDLWRRRLPAACLHSELDPALR
KRVLRALEGNRLRLLYLGPETLFSPPVWKRLQQVSLNGLIVDEAHTLVHW
GGSFRPDYPRLGLVRPALGQPAFPIAAFTATADPETLSRLRHILKLRDPE
CIRADPLRANISLNVEVAWSPADRRRRLLRFLVENPGSGLVYVRTRRDGE
ELAEWLGRHHQKTAAYHGGLEAGSRRRLERAWLEGELRFLVCTNAFGMGV
NKPDVRWVLHFHPPPNLMDYLQEVGRGGRDGGPCRALMLVSEPTGLLDPT
DRQRQAYFYSQQERLLAQARRLLTTLPPQGSYADLPPGETRVALGLLQEM
GCLHWPDPFHFQVLHRHWQPPPRQDPWRGMDDLIHSRSCRWQVILRHFGY
PENQPGLPCGTCDRCRAAQRR
>CYA_0452 conserved hypothetical protein
MARHVELFQLLKAKPCLSERAGHLAEEIEALGRQERRELVNRLGILPGHL
LKGQFQLQLRGKSWRATISEQRRQIQQLLKESPSLKPELLAALPEAYQDG
ILLVVKETPLSEEDLPAECPYTLEQVMDLGFYPGSE
>CYA_1359 ISSoc5, transposase, truncation
MRIAYQYRLRPTSSQVALMGEWLELLRKQYNYRLAERFRWWEQNRCGIHA
CSLTVCHLPELKEQPDLYSQQRDLPNTKALFPEYREIYSQVLQDCIRRVQ
RAFDRWIKGDSNGKRAGRPRFKGVGRYRSFTFPQMKQDCIRGKFIHLPKI
GPVKLIQHRPLPDGFTIKTATVTRKVDGWYSLLRAQGVQ
>CYA_1127 ISSoc4, transposase orfB
MQRERLAYSQEVRNIPAEDLIAIDQTGVWEGMERRVSRSLRGQRAYHYRQ
RYKGEKYTVIGAISLRGVVGCRVIKGGMKKGDFLEFLRSELCPKLDARKV
VIMDNLNIHKSREVEELIRGTGARILYLPVYAPELNPIEMMWSVLKHFIR
QLCRIGKYSMEQIVKTSLLLINPSSFRSWFAKCCYCTP
>CYA_0846 base excision DNA repair protein, HhH-GPD family
MLESLLARLEQCFGIPQRPRSPDGLPLYPDLLDELVGTILSQNTTDHNSS
RAFRALKAAFPSWEAVLAADPTKLAQVIRPGGLAQLKAARIQEILAAIVK
RQGSLSLDFLRDLDDADALAYLLSLKGVGLKTAACVLLFGLGRDLCPVDT
HVHRVANRLGLVRARHPDDTFAQLSPRIPAGKAYSLHVNLIRLGKRICKA
RMPECGRCPLRHECPSALLRQR
>CYA_1645 ISSoc2, resolvase
MARYVKPREAADYFGVCLHTLRRWEQKGWIHAVRTPSGRARRYNLDSYIG
LRPADANRAPKKDKRVVLYARVSSRGQKPDLERQIARLVNLYPGAEVVGE
VGGGLNFKRPKFLALLERVRAGDVGTIVVAHRDRLCRFGFEFVEWYCRQY
GCEILVLDDDHLSPQQELVEDILTILHCFSSRLYGLRKYRAAIEKDTDLS
GASAG
>CYA_1360 ISSoc4, transposase orfB
MQRERLAYSQEVRDIPAEDLIALDQTGVWEGMERGVSRSLRGQRAYHYRQ
RYKGEKYTVIGAISLRGVVGCRVIKGGMKKGDFLEFLRSELCPKLDARKV
VIMDNLNIHKSREVEELIRGTGARILYLPVYAPELNPIEMMWSVLKHFIR
QLCRIGKYSMEQIVKTSLLLINPSSFRSWFAKCCYCTP
>CYA_1956 ISSoc5, transposase
MRTAYQYRLRPTASQVALMGEWLELLRKQYNYRLAERFNGWEQNRCNIHA
CSLTVCHLPELKDKPDFDSQKRDLVNTKALFPEYQAIHSQVLQDCVERVQ
RAFDRWLKGDCNGKRAGRPRFKGVGRYRSFTFPQMKQDCIRGQFIHLPKI
GPVKLVQHRPLPEGFVIKTATITRKVDGWYVTLSLQDSSVPEWSPDTPTW
ENTMGIDLGLSSFLVTDEGEAVEVPQHYRRAQKPLKRLQRSVSRKQKRPN
RYQKAVKRLSKAHQKVANQRRDFHHKTARKLLQTRKHIAHEALDIKGLAR
TRLAKSVHDAGWGQFLQILAAKAERAGLLTIAGDPRGSSQGCSGCGREVP
KKLHERWHDCPSCGLRLSRDHNSARVIKSRAVGRPVLQAQEMSCHWAGVT
VGEAWRKP
>CYA_1440 ISSoc14, transposase, truncation
MYLVRKLKLGVSEQLQLLSRAAGELYSKVLVHFWRVVRKKGLWLKPSTLM
RWFPNDPENTLHAHSADAVVQSFFASLKSWRERRQTDPNARPPRRRRYYS
KVQWKSSAIQVVNGKLRLSNGKGNEPLMINWAWDTPVWVEMGWDGQQYEL
RA
>CYA_0874 putative CRISPR-associated RAMP protein
MTPQGPRPLPAGNPARGRGELAVARKPYELIPFPQQPPKLEHPAGHAKFH
PDKLHGTLFLTLTVQTALHISTGHLALGSDVGVNGIRVLKTMTTTPDGRL
KIQGSSLKGAIRAMYEAITNSTLAVITSRYKDRIPPERQPCRQKERLCPA
SRVFGALNWQGLVEFRDAIATGTGSGVGSLPPLYRPRPDQCKAYFKKENG
KVIGRKFYYTHKKALQGHQKGTPTQQAAQNTVFKTQIHFKNLTPAELGTL
FTVLGQDPNHPMLLKVGGGKPVGLGSLQVTLDKIEQPRNLKERYSRYDPP
EADTLEGGRLQAFVQEQIRAAQGYILPEQLKRLAAILSPTALREPPTGVY
>CYA_0721 exonuclease, SbcC family
MIPVRLTLHNFLCYSQAVLDLRGIHTACICGPNGAGKSALLDALTWGLWG
QSRASNDSDLIRKGASETWVEVVYRSRGQTYRVLRSRHLAGEGSLEWQIQ
TGESDGQARWRSLTRRGLRATQQAIQNQLGLDYDTFVHSAYLRQGQADAF
TLKRPGERKQILADMLKLGQYDLLAERCREQARSAKLKADLLQERLHKLD
QHQVSIEQMQAELEQLQQRQIHLQQLLAQQQQELQALERAYEHRHTLEER
HQQLAQHLNKLSVNLHHTEQQWRAQRQHLLQLQELIAQSEEILAGYERYQ
TLMAQDRHLHHLFEQQQYLLQERQKLQAQQAEQQQQQLRRMQRLQQELAA
CQAQAQADAQVLAERERIENALHHYRQAQERLQSLNEAQAQAAALLEQQR
HWEEEIRREGERLQARLQFLQEHLQSQETLAQQQQHLAQKIAASAAALAE
LERQRLYQQQVLEKIQERRLFVQKLQERQRVLQHQWQQEEERCRLLEAPW
EEFPVGDSGAESLHAERLDPAELEDLDRPDHLGPSDPDSGRCRPTHALSG
AKAIAEGAAEPGSEVTADPLFSEQPAESMPAPPTKVPTAPIWVCPLCARP
LSPSLRAVVLKKHRQRQEEIAGELFVIREQLAVADREIGLLQEEAQRLGQ
ELATWDERLHLQGRLQQQWEAEQERQRQLEARRAEAAELEQILSQEAYAQ
EARQQLAQIQQALQQLGYDEREHALQRGEVERWRWALGRSHELRKAQERR
ARLGEQIASLQAQLEALQQAGSPDSPLAERLAQIEQALHQVGYDGSLHQQ
VKAELAQAQLWPARLQALQMARQELPEATARSQALSQRLQESRQHFAQAA
QELEALQRQLAEHPDVSPAHLEGIRQALQENRQELDLVLSQIGAARQRLQ
QALEQQAERTELERQLQQARRQQQVYQELANAYGRNGIPALIIENVLPEL
EAQANQILGRLTQHRLHLRFVTQRSGRRSEKLIETLDILIADPRGTRPYE
TYSGGEAFRINFAIRLALSRLLTQRSGSDLQTLIIDEGFGSQDATGRAQL
LAAINAIASDFACILVITHIPSLQEAFPHRIDVQPSPQGSRLFIRG
>CYA_2639 ISSoc4, transposase orfA
MPTHSLDLRQRVVAAYQAGNTSIRQVAKRFMVTKRTVHRWVRQYQQTQDL
APKKAGTKRVGILEQHRQEVMAIITEHPDFYLWQYQELLRERLGINVSIV
TIHNFLKKQGMTLKKRPTAVQKSKKRRCKGND
>CYA_1882 serine/threonine protein kinase
MPNCYCLNPDCLRPENPPAASTCAFCGQPLLLRNRYRAFKRLGQGGFGAT
FLARDEDMPSKPWRVIKQLRPAENSPQLARLAEELFNREAEVLERLGEHS
QIPKLYAHFQEGGKFYLVQEFIEGITLAQEMRRNGPFSEEQARQVMQEVL
LILSYVHSHNTVHRDIKPANLIRRKEDGRLVLIDFGAVKQLGPGHTLSEE
GTAIRSLGFSPPEQMAGQAVGPASDLYALAATCLNLMTLESPAKFYDHNT
GQWDWSDRLQLSPEFDAILRRMLHPVISQRFATATEALRALQGIPVQEGP
PSSPVILPPSPLTAGSSPLLISDHWTRRRSTSPPPARTDGFSPTPLPRPG
AGDMLPLGSVPTGWGSTTGFTQLGQASRITGGGQIKPATPPRIPSLAGAD
LRGKSFANQNLAGYDLRCADLRGADFSGANLQGADLRGIRFNTPQPRWLR
FLSRLLGSAKTLGEILAGLGGLLGAGSLAFLLVHLATRNVVYALGAAGMA
LVVAGSVLWSAGGRTSLPRQAEEKGKRFTSFYKADLRGAQMDRKLREFAR
RQGAILS
>CYA_0777 ISSoc5, transposase
MRTAYQYRLRPTASQVALMGEWLELLRRQYNYRLAERFNGWEQNRCNIHA
CSLTVCHLPELKDKPDFYSQKRDLVNTKALFPEYQAIHSQVLQDCLQRVQ
RAFDRWLKGDCNGKRAGRPRFKGVGRYRSFTFPQMKQDCIRGQFIHLPKI
GPVKLVQHRPLPDGFVIKTATVARKADGWYVTLSLQDSSVPEWSPDPPTW
ENTMGIDLGLSSFLVTDEGEVIEVPQYYRKAQKPLKRLQRSVSRKQKGSN
RYQKAVKRLSKAHQKVANQRRDFHHKVAHQLLQKGRHIAHEALNIKGLAR
TRLAKSIHDAGWGEFLQILAAKAERAGLLTIAGDPRGSSQGCSGCGREVP
KELHERWHDCPHCGLRIGRDHNSARVIKSRAVGRPVLQAQEMSCYRAGVT
GKPALYASA
>CYA_1263 hypothetical protein
MTQSIDLPTSVDTFLQELAAIQQVGPKRIAILGSRHVPITHQYLIETLSY
ALALTGNRILTSGAIGTNLAVIRGAMRADMKSLTVILPQSLERQPAESRA
SLEQVLHLVEHPENDHLPLAEASRLCNLEIVSKCQQLICFVFHDSVTLLE
ACRHAEEQHKVVTLFYFD
>CYA_1642 putative transposase, truncation
MTIAGNPNGMSQECSGCGQVVPKKLHERWHDCPYCGLSLSRDHNLARGIK
SRAVGHPVLKAQETPAAIAGIPVREAWRKP
>CYA_1891 ISSoc2, resolvase
MARYVKPREAADYFGVCLHTLRRWEQKGWIKAIRTPSGRARRYDLDSYIR
TPKKAKRVVLYARVSSRGQKSDLERQIARLVNLYPGAEVVGEVGGGLDFK
RPKFLALLERVRAGDIGTIVVAHRDRLCRFGFEFVEWYCRQYGCEVLVLD
DDHLSPQQELVEDILTILHCFSSRLYGLRKYRAAIEKDTDLSGASAG
>CYA_2859 serine/threonine protein kinase
MNQLAPGKVIGQRYQLVQSIAAGGMGQVFKAVDTRLFNRPVAVKLLHQNL
AGDENTRRHLLKRFQQEIRISTLLGEHPAIVKVLDYGLENNQPYLVMEYL
TGRSLGELLLKQPLLPPQQVVKIARQVCAGLYYAHNLETEQDGHLIKGVI
HRDIKPSNLFVLKDETLGETVKILDFGIAKLLSDVSLALGTQTTGFLGTV
RYASPEQVRGEELDPRSDIYSFGVVLYRMLTGQHPLKPKTDSFPGWYEAH
NYQQPRPFDRSQLPHEIPPALEEVVLACLAKDPGQRPPNMKLLSDQLEGS
LQSDSSAGSALTPPPTTSPFSERTLAALDGQEGAHRLSAQPEPKGRPLPL
WGGIALLAAIAGSTFWGLRLLLDPGTGMERPPAVPLPPATDGQQAIPEPL
LDWLLRDPAGEPAFEDDPDPARDNPQDPPQPEPTPTPATAPAPPPTSPPP
PPTPVPAAPPPRPVAVPTPAAPPSPARVPAKPLPPQPINQPLFPPINRAA
PPAASPTPAQNPTPSFLERLREERERLGKD
>CYA_2724 ISSoc3, orfA transposase, interruption-C
MLQRLEDIFRATCQKWRCSLVEFDGEADHVHLLVSFPPDVQVSKLVNNLK
TVSSRLIRKEFVTEVARFYSKPVFWTGAYFVASCGGVTVEQLKKYVEQQA
TPRL
>CYA_0008 type II DNA topoisomerase, A subunit
MTQQLTLDGLGSGSGGGSRLGRVIVTDLQGEMQRSYLEYAMSVIVGRALP
DVRDGLKPVHRRILYAMHELGLTPDRPYRKCARVVGDVLGKYHPHGDQAV
YDALVRMAQDFSSRYPLVAGHGNFGSVDDDPPAAMRYTECRLAELSHTAL
LQGISEAIVDFMPNFDGSQAEPTVLPARLPILLLNGSAGIAVGMATNIPP
HNLGEVVDGLLALIDEPDLSPEELLRWIPGPDFPTGGQIVDGQGIREAYL
TGRGSITLRGVARFEEIQPGRGRHRRPALIISEFPYQVNKAAWLEKVAEL
VAQDRLSGIADLRDESDRSGMRVVVELKREANPQAVLQQLYKLTPLQSTF
GVILLALVEGKPQQLSLKQILQHFLQFREATLKRMFRAELQQVQRKAEEV
AGMVLALADLEGVIDLLRQAPDSATAKAQLQTRLGCTSQQAETILAMPLR
RLTTLERERLYQEQAELQARIAELQGLLQDRRKLLNYLKKELRHLKKTFA
DPRRTQILSASELEAEAAQIPGGEAGEDSRFLLQLTRKGYVRRLPLPGPR
SRSNPAQRELGEDTLVSLECVTPEQAILVLTASGRAFTVPIEGIPLSTGS
SRGVPLVTLLPNPEPIVAAFPLDPVRVSGAEHSPGEASLVVLSRQGRIKR
VALAELVGLSQRGAAVLKLKEGDELGWAALWHPGHQGYSVVLATSGGRVL
RLDAEQIPLMGRAAMGSPALRLGRTEQIVGMALLPPQGILVLASRSGYLK
RLPLGEIPILEQGKVGVSAFHFSNKGDGLVGLVGFPPDLAAHPHLQVDVI
AESERVHSFSPEEIPLQGRSGGGSLLVKGEQVRELRLFWPQWLPEGGIG
>CYA_2002 ISSoc2, resolvase
MARYVKPREAADYFGVCLHTLRRWEQKGWINATRTPSGRARRYDLDSYIG
LRPADANRAPKKDKRVVLYARVSSRGQKPDLERQIARLVDLYPGAEVVGE
VGGGLNFKRPKFLALLERVRAGDVGTIVVAHRDRLCRFGFEFVEWYCRQY
GCEILVLDDDHLSPQQELVEDILTILHCFSSRLYGLRKYRAAIEKDTDLS
GASAG
>CYA_1585 ISSoc1, transposase
MTQVLTVSCKLKVSPSQAAKLDATMDAFVQALNWVNQNTPEKVVNAVKLQ
SLCYYQIRARFGLSSNLAQQVCRRLAGARKVARQKNRPVKAFKRGFATYD
ARIFSLREKDWTVSLTTVGGRERFELAIGNYQRGMLAGSNPKSATLVQRK
DGSYYIQICVEKNPPKQQDTDRVIGVDLGRTDIAHTSEGDNWNGQQLNRV
RDHYSKLRAVLQRKASKGTRSSRRRCRQLLQRLSGKERRFQTWVNHRISK
AIVSRAKATNSALALEDLTGIRGRVNQQPRSKAERRRANSWAFYQLRQFL
EYKALRAGVALILVPPAYTSQTCHRCLHIHPDPAQSYRSGKKFKCGHCGW
EGDADLNGANMIALLGAAVNQPRGSWLACQLQGYRSRQRAGGLKPALYCE
AVRVG
>CYA_1801 conserved hypothetical protein
MTLLLGLLIGLAIGFCLGVYTCRLTQRADSQLLDEILRKLQADLEGFKLH
ISESLSESYQNFLQHLAEYRSQLVKNISNQQNILSRLLESTEKISQNLSS
SSSLQKTKETNERTAGARLKSLPPGTISLEQVKIGVFLWSRDIRMKNLIP
SSKKADAEGELDNKLNWISNLMGQRYSLIEKLYKEIKSGIGEEKALTLCL
KGNSPEVISYSCQLASTLHKVNFLEEYNYSKSSKNLRVKLSKSTEAIKFL
SGDWLERYVKQQLIKFAREQGQKIDFSYIANEEVTLPDGSDFEIDLFFHI
NNRFYWIESKTGSYRDCIEKYSWLASEMGLGPDQVFLVLADVDQETRSRI
YSSYNLSAISVEEVESLLYRIVRR
>CYA_1128 ISSoc3, orfA transposase
MVVAGQDPVLVGENHETVLAFSATSYNIGHRSVYSLQIHLVLVTKYRRRV
ITAPMLQRLEDIFRATCQKWRCSLVEFNGEADHVHLLVSFPPDVQVSRLV
NNLKTVSSRLIRKEFATEVARFYSKPVFWTGAYFVASCGGVTVEELKKYV
EQQATPRL
>CYA_2063 ISSoc3, orfB transposase
MIITHEYRILPSDDQAALMTEWLELLRRQWNDALGQRLDWLTATRCPIDR
CSLVSCPLPVSEAPLEPNYYRQAGSLKQIKQLFPAYRGIYAEVLQQNLMR
LDKAWKAWREPDSTGKRRGRPRFKKAGELRSFTFPRINCPKAGAHLEGET
LRLSKIGSMPVVLHRPLPEGFVPKTCTVVRKADGWYVCISLEDKSVPLPE
PVPIKKAVGIDVGLDRFLTTSDGEVVPIPRHYRQAQKHLARQQRQLSRKV
KGSANWKRQATKVACLQLHVARQRKAFHYQVAHWLVGQYDLLVVEDLNVR
GLARTRLAKSILDAAWGRFLDILTAVAVKRGKQVLRVAPRGTSQNCCVCE
ERVPKALSERVHDCPRCGSWDRDLNAAIEILKRGLRAVGLPLSGCGGSWF
TSPLKQQLREVILGSSRLQPVRA
>CYA_1937 ISSoc2, resolvase
MARYVKPREAADYFGVCLHTLRRWEQKGWIHAVRTPSGRARRYDLDSYIG
LRPADANRAPKKDKRVVLYARVSSRGQKPDLERQIARLVNLYPGAEVVGE
VGGGLDFKRPKFLALLERVRAGDVGTIVVAHRDRLCRFGFEFVEWYCRQY
GCEILVLDDDHLSPQQELVEDILTILHCFSSRLYGLRKYRAAIEKDTDLS
GASAG
>CYA_1772 ISSoc2, resolvase
MARYVKPREAADYFGVCLHTLRRWEQKGWIKAIRTPSGRARRYDLDSYIR
TPKKAKRVVLYARVSSRGQKPDLERQIARLVDLYPRAEVVGEIGGGLDFK
RPKFLALLERVRAGDVGTIVVAHRDRLCRFGFEFVEWYCRQYGCEILVLD
DDHLSPQQELVEDILTILHCFSSRLYGLRKYRAAIEKDTDLSGASAG
>CYA_0397 ISSoc2, resolvase
MARYVKPREAADYFGVCLHTLRRWEQKGWIKAIRTPSGRARRYDLDSYIR
TPKKAKRVVLYARVSSRGQKPDLERQIARLVNLYPGAEVVGEVGGGLDFK
RPKFLALLERVRAGDVGTIVVAHRDRLCRFGFEFVEWYCRQYGCEILVLD
DDHLSPQQELVEDILTILHCFSSRLYGLRKYRAAIEKDTDLSGAGAG
>CYA_2001 ISSoc2, transposase
MTITFLPNRNWLRISSPSCTASAVGSTDSENIGLQSRKIRIYPEPALAKV
WKRWQAACRYCYNQAIAYQRQHGAPKTARKLRDIILRSDLPGWVKDVPCH
IKQNAVVEAWLAFRRSKDARFRSVRDRSHTLQFNAGNFRNGTWYPKLTRG
LTFRASEEMPREWARGTELMRVKDRWYAIFPEPVNEQCSLAKGVIALDPG
VRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSRLSKAPRPKRRRMR
QAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKF
GSKTARAMLTWAHYRFKQLLKFQAKKKNVVVVEVSEAYTSKTCTKCGHIH
TKLGGAKVFRCPKCNHRLPRDWQGALGVMLRALRDTAFLFGLRPSSAVAS
ASRSDNGNGQNAIASPLSSNAQQCSA
>CYA_1293 putative type III restriction-modification system, Res subunit
MARTTIDRLIINSPYEEPKKHWRYDRETRTFELVEGQRPAGYVVATPGSK
SFDDPGIFVEIPLVNQIRLRVKAWREAGYPGITSITRRLLAHWHDPEEFD
RRRFFFCQLEAVETLIWLTEAPAAERVGIEIPGDGGDFDRRCCKMATGTG
KTIVMAMVIAWHILNKVANPQDARFSKNVLVVAPGLTVKKRLAVLEPAGA
GNYYEAFDIVPSTLLDKLRQGRVLVRNWHALAWESEEQIKKRKSVDKRGA
KSDEAYTREVLGEMANAHNLLVINDEAHHAWRVNWEAEGKYLRQRDLKDS
AQEATVWVGGLDRLHRSRGILTCYDFSATPFAPSGKKSSEEALFGWIVSD
FGLNDAIESGLVKTPRVVVRDDAVPNAKTYKSRLYHIYNDPEVKDDLNRR
ANPEELLPDLVLNAYYLLGYDWRETWKAWKAADLPTPPVMITVCNRTETA
ARVKHAFESRRIPIDELCNSEGILHIDSKVLEEAEAKEEFTAVVEASDEA
DDGEEEDVPVECRLTKAEQAERLRKIVDTVGQVGQPGEKIQNVISVGMLS
EGWDAKTVTHIMGLRAFTSQLLCEQVVGRGLRRTSYEINPQTGLLEPEYV
NIFGVPFTFLPHEDSGDGPPPPPTPKTAVEPDPAKAEFEIRWPNVVRIER
LLQPTLTLDWSKVQPLELDAAQTPQVAELAPILEGKPDVNQISRIELEKL
AREFRTQRIIFETARNVFDQVRQSWRGSREILLAQLVRIVEQFIRSDRIL
ISPPLFYQDELRRRLIITLNLSRVVQHVCEAVRQENTEKLVPVFDRDHPI
RSTGQMRTWYTSKPCERTRKSHINVCVYDSTWEASDAFVLDNSSAVSAWA
KNDHLGFEVLYLYRGVVRKYRPDFLVRLANGDMLILETKGQDTELDRVKR
RYLDEWVQAVNAHGAFGRWRWKVARYPGEIRDTLLQS
>CYA_2636 ISSoc3, orfB transposase
MIITYEYRILPSDDQAALMTEWLELLRRQWNDALGQRLDWLTATCCPIDR
CSLVSCPLPVSEAPLEPNYYRQAGSLKQIKQLFPAYRGIYAEVLQQNLMR
LDKAWKAWQVPDSTGKRRGRPRFKKAGELRSFTFPRINCPKAGAHLEGET
LRLSKIGSMPVVLHRPLPEGFVPKTCTVVRKADGWYVCITLEDKSVPSPE
PVPIKKAVGIDVGLDRFLTTSDGEVVPIPRYYRQAQKHLARQQRQLSRKV
KGSANWKKQATKVACLQLHVARQRKAFHYQVAHWLVGQYDLLVVEDLNVR
GLARTRLAKSILDAAWGRFLDILTAVAVKRGKQVLRVDPRGTSQNCCVCE
ERVPKTLSERVHDCPRCGSWDRDLNAAIEILKRGLRAVGLPLSGCGGSWF
TSPLKQQLREVILGSSRLQPVRA
>CYA_0038 ISSoc4, transposase orfB
MQRERLAYSQEVRNIPAEDLIAIDQTGVWEGMERGVSRSLRGQRAYHYRQ
RYKGEKYTVIGAISLRGVVGCRVIKGGMKKGDFLEFLRSELCPKLDARKD
LNIHKSREVEELIRGTGARILYLPVYAPELNPIEMMWSVLKHFIRQLCRI
GKYSMEQIVKTSLLLINPSSFRSWFAKCCYCTP
>CYA_0680 conserved hypothetical protein TIGR00252
MDPLPRRASLQNTGNVGEGWVRQYLCQQGWQILAQRWRCPWGELDLVAHK
ADVLIFVEVKTRSPGSWDRGGLLAVGIPKQRRLIRAAQAFLSQHPHLSEL
SCRFDVALIERRASGEGVSYALVDYLQAAFEIC
>CYA_1358 ISSoc4, transposase orfA
MPTHSLDLRQRVVAAYQAGNTSIRQVAKRFMVTKRTVHRWVRQYQQTQDL
APKKAGTKRVGILEQHRQEVMAIITEHPDFYLWQYQELLRERLGINVSIV
TIHNFLKKQGMTLKKRPTAVQKSKKRRCKEND
>CYA_2649 putative methyltransferase
MGLRISGKRALQTPAGLGTRPTPGRVRQALFNILRGQVEGCRWLDLCCGA
GTVGAEALCHGAAFVAGIEIAAPACRIIRANWAKVAQPGQSFQVIQGDAR
KLLSRGLGLDPFDYVYFAPPYEAGLYAPLLPLIPPLLKPGGTLIVEHRSS
HELPDQVGSLLRFDQRAYGQTALAFYRHLGEER
>CYA_1977 ISSoc7, transposase
MLPRYPKVMLLGFCTRLELNNRQKTLAAQHAGVARHAYNWGLAICKQAVE
SKQKLPTAIDLHKRLVAEVKKENPWYYQVSKCAPQQALRNLEQAFKRWRS
GLGKFPRFKRKGVRDSFYLEGSIRISGDRIKVPILGWLRCAELLPTATPK
NVVISLRAGHWYVSFKYEAPAPQVEKTGEVVGVDLGINRLATCSDGEVFE
NPKPYYKAKKRLARLQRRLSRKQKGSANRKKAVAQLAKAHKRVAGIRQDN
LHKLTTYLAKKYRVVVIEDLQVKNLLKNHKLAGALSDCGFYEFRRQLEYK
ARLYGCQVVVADRFYPSSQLCSRCGHRQKMPLQERMFCCPCCGLELDRDL
NAALNLLRWYRTTSSSGGSDACGDPSGGVVGVNSAASHGSLKQEESSDAG
QSSALFSVA
>CYA_1471 ISSoc2, transposase
MTITFLPSRNWLRISSPSCTASAVGSTDSENTGLQSRKIRIYPEPALAKV
WKRWQAACRYCYNQAIAYQRQHGAPKTARKLRDIILRSDLPGWVKDAPCH
IKQNAVVEAWLAFRRSKDARFRSVRDRSHTLQFNAGNFRNGTWYPKLTRG
LAFRASEEMPREWARGTELMRVKDRWYAIFPEPVNEQCSLAKGVVALDPG
VRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSRLSKAPRPKRRRMR
QAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKF
GSKTARAMLTWAHYRFKQFLKFQAKKKNVVVVEVSEAYTSKTCTKCGHIH
TKLGGAKVFRCPKCNHRLPRDWQGALGVMLRALRDTAFLFGLRPSSAVAS
ASRSDNGNGQNAIASPLSSNAQQCSA
>CYA_0737 ISSoc8, transposase, interruption-N
MSYNKPMSQIISVRCKLIVPQELRQEIDRTLQGFANACNQILDTAKQKNC
WNTAKLHHLVYRPVRAATGLKANHVCQALRRVISNAKAVKQVHKFRPTSL
TLDARTFKYRESNQAVGVTLMSGRVWLKLKIGGYQIALLRGQTPTSATLS
KTKQGEYYINIAVELDTPPTGKTPKVIGVDLGRRDIATASNGRSWSGEHI
QAVRDRFSRVRAKVQSKRTRSSRRLLRRLSGRERRYAA
>CYA_0981 ISSoc1, transposase
MTQVLTVSCKLKVSQSQAAKLDATMDAFVQALNWVNQNTPEKVVNAVKLQ
SLCYYQIRARFGLSSNLAQQVCRRLAGARKVAQQKNRPVKAFKRGFATYD
ARIFSLREKDWTVSLTTVEGRERFELAIGRYQREQLAGSNPKSATLVKRK
DGSYSIQICVEAEPSPPQRTDRVLGVDLGRTDIAHTSEGDNWNGQQLNKV
RDHHSRLRAVLQRKASKGTRSSRRRCRELLQRLSGKERRFQAWVNHRISK
AIVSRAKATNSAIALEDLTGIRKRVNQQPRSKTERRRANSWAFYQLRQFL
EYKALRAGVALILVPPAYTSQTCHRCLHIHPDPAQSYRSGKKFKCGHCGW
EGDADLNGANVIALLGAVVNQPRGSGLFCSLVEQSRLRATESPLRTALAV
GVG
>CYA_1136 ISSoc3, orfB transposase
MIITYEYRILPSDDQAALMTEWLELLRRQWNDALGQRLDWLTATRCPIDR
CSLVSCPLPVSEAPLEPNYYRQAGSLKQIKQLFPAYRGIYAEVLQQNLMR
LDKAWKAWQVPDSTGKRRGRPRFKKAGELRSFTFPRINCPKAGAHLEGET
LRLSKIGSMPVVLHRPLPEGFVPKTCTVVRKADGWYVCITLEDKSVPLPE
PVPVKRAVGIDVGLDRFLTTSDGEVVPIPRYYRQAQKHLARQQRQLSRKV
KGSANWKRQATKVACLQLHVARQRKAFHYQVAHWLVGQYDLLVVEDLNVR
GLARTRLAKSILDAAWGQFLDILTAVAVKRGKQVLRVDPPGTSQNCCVCE
ERVPKTLSERVHDCPRCGSWDRDLNAAIEILKRGLRAVGLPLSGCGGSWF
TSPLKQQLREVILGSSRLQPVRA
>CYA_2034 putative transposase
MLVREAKLLNGTPKQYQALDEAIRTAQFVRNKCLRHWMDNRGVGKKHLYA
FCKDLAKEFPFANKLNSAARQASAERAWLSISNFYRRCKQGEKKKGYPQF
KKHCRSVEYKQSGWKLSDDGLSITFTDGFGAGTFALYCNGEARQDILSSK
INRVRVIRRADGYYAQFCLDVDRKEQGQYTGNVIGIDLGLKHFYTDQNGN
TVNCPKFLRRSEKRLKRHQRKLSRMFAKGRKPQSNNYHKQKNRVGRIDLK
VQRQRRDWAIKLARCVVMSNDIVVYEDLPVKNLVKNRHLAKSIQDASWSL
FTHWLDYYGKVWGKAIVAVPPQYTTQDCSGCGHRVVKTLSTRTHICPKCL
LVLDRDQNAALNILKKGLSLLGLSIFKLSVLGLKWQNGTLGHKGTAAPRP
PVSPRIRGDVGGPGGRERLGRDAPLL
>CYA_0209 serine/threonine protein kinase
MFTASDPFLGRLLAQRYRLTHLLGQGGMGRVYLAQDLLFGGVEVAVKLLS
QPAMDEQARLRFEREAKACAALGQKSLHIVKVSDYGITADGVPFYVMEYL
NGQTLKDILATGSLPLERFFRLARQIGLGLKAAHEGILLEGQRIQVIHRD
LKPANVIVLADESLGELAKLVDFGIAKLLNTRESLSLTHAYLGTLAYSSP
EQLEGLPLDARSDIYSFGIMLYQMVSGQMPLQPTTESFPGWYQAHHKQRP
LPLEELGLPLALPAGLSDLILSCLAKDPAARPPTVANVLAELERIQARAQ
GSPRGASQAVALQFPAIPSGPLFPSAPPLATAGTLRLAPPTMASENRGSL
LWARLIPFLGGSLLGLALVSWGLGRLLQRPAAPVLSGSRPSPAATELEDE
RPGAEAQPDTAPEVLVPDILGSSAGQDEGATRRDPAPELEPYSGPVLRAF
PLQTSREVVRAALGSPSQQGRGARPNTVYDLYRLGSMNLSLTYDESSLAL
QQIEATVADDVPAPQAEGLLEDMLQAPLPPQLQRELQAVRENRSERVQFR
VGPWSGVVERTPQGHLYMAVWDPPPTVPVAQPRPAPRATPAAAGPRPGQT
LQELLRRARELRGD
>CYA_0322 putative helicase
MQPGSIVCCRHREWVVLPADSEEGVVLRPLTGTPEDAIHIHRQLMNLVGG
TLPFERIEPAFFPLPCADRVADAAAAHLLWQAARLILREGATPFRSLGRI
SIRPRTYQFVPLLMALRLDPVRLFIADDVGVGKTIEALLIARELLDRGEI
RRFCVLCPPYLCEQWARELAEKFHLEPVVIRSGTVGQLERQTPLGQSLYE
YFPVQVASIDFVKTERNRPQFLQFCPELIIADEVHGAAAASSGRAQQERH
ALLRAIAQAPNRHLILLTATPHSGIPEAFRSLLGLLRPEFEAWDFQDLTE
SQRLELARHFVQRTRRDIKETWQETACFPSREAEDETYDLSPRYRELFER
TYAFCAELVRTGQQMEQRRRRVRYWGALALLRCVMSSPAAALAALANRGA
GSREEEAEEAEESFSRWVFESAEERTDDELPLPALEAADQTLPDSDRRRL
RELARLAGQLRGVDQDTKLARAIELVKRLLKESFHPILWCRYVATAEYLA
DHLRQHLGSATQVACVTGRMGDEEREAKIAEMAVDQPRVLVATDCLSEGI
NLQEKLTAVIHYDLPWNPNRLEQREGRVDRYGQRAPRVKVIRFFGRDNPV
DGVVLKVLLNKVREIRRTLGTHVPVPEASESVTQAVLEALFLRQGSGSGE
RQLELDLGMAEVSRFHARWDRSAEQERRNRTRFAQRSLKPEEVQRELEAT
DAVLGDPQAVQQFFLAAAQRLGLAVIPDRQSGVFQVNLSREGTATLPEAI
RSALPQPKGGHWRISFVSPTPEGAEYVGRNHRLIAALAHFLLEKALDNPE
EAVVSRCGVVRTRAVAELTTLLLLRVRYLVEQPLAQPLLAEEVLVLGGVG
LERGAARWLETGAALQLLAKATPDANLPLAEKQELVQHVLDSLSPWPPTA
ENWGLGHPLQQGIREAICRRAGELADAHRRIRQAISQRVRGLEVKPQFPP
DLLGILVLQPLLSR
>CYA_0739 ISSoc8, transposase, interruption-C
MNQKPRSKAERRRTNNWAFYQLRMFVTYKAAIAGVPVVLVPPAYTSQTCH
KCLHIHPEQGKSYRSGKLFKCGHCGWEGDADYNAAQVISLLGATVNSPEI
PKLSCPLGQLGIGIKPAPCA
>CYA_2756 protein kinase
MAWAVGEELQGGRYRIEAVLGEGGFGITYRAWDSVRAEDVVIKVLKDSIR
EDPDYPRFQQNFMNEALQLARCRHPHVVKVEEVIWEQERWCIVMEYIRGQ
TLHQLLRQKGPLPLPEALRLTREVGSALMALHEQGILHRDVKPANILVRE
GSGQAVLIDFGLARAYAQGLIQRHTSYGTDGYAPLEQYDSLRRRGAFTDV
YALAATLYTLLTGIVPLCAPVRATGRQLDPPRSLNPSIPEEVEAAILKGM
ALHPEERPQTMAEWLALLPGAASQEEKKPLTFEPAIRTQDLRQLERLLAP
QPQDELEQLLAQHSAEELEQMVAPPTPATTKKKEGASGSLVSPEVCLEGQ
GSLPATLPWPDWVGEAAPALQGLWDRLRAGQWGEADRWTTALMLKLGGRS
QVGFFDPKDVEAFPCPMLRLIDQLWMQASHGRFGFTVQKQLWQECDSEKR
GGLSSRSFSALPREECMGEKVGWQIQGRWLEYGELKTNLEAPKGHLPVGF
FWGYSGGLRAALLMLDRAVLKKFKACL
>CYA_0701 hypothetical protein
MTQSIDVPTSVDTFLQELAAIQQVGPKRVAILGSRHVPITHQYLIETLSY
ALALTGNQILTSGAIGTNLAVIRGAMRADMKSLTVILPQSLERQPAESRA
SLEQVLHLVEHPENDHLPLAEASRLCNLEIIGKCQQLICFVFHDSVTLLD
ACKHAEEQHKLVTLFYFD
>CYA_2262 protein kinase
MSFDLTNRILGGRYRLIQEIGGGGMGSVFRALDLHNNHQEVAVKILHAPL
LLSRGDAQIDLRRRFAEEIRISILLGQHPRIVKVLDHGQEGEQAYLVMEY
LKGQDLGKLMREKGALPLRQVIRLALQACEGLHFAHTFRAKVDGREIRGV
IHRDIKPSNLFLEQVLQEGQLTSQLKILDFGVAKTLADHTLSLGTHKGGG
FIGTARYASPEQIRGKSLDARSDIYSFGVVLYEMLTGSMPFRLETDSLHS
WIHAHCYESPLEINPETTPQPIPPALAAVVMDCLKKNPDERPQTMQELGE
RLLQAYELTVATQLPSSQASTVILPTGGAKAQNEAPPSSDPRPPIKTTGN
TGSASGAFEDIRDEDLDLVEDDPIPPAGAGIPYYIAEREPLPSDPSAEAA
PDPSPKVEGETAETPSTVIQASNTLPAAPPQDPPVPPRTDTPPTRPLPQA
APPTVLQPSGSSLKWVLAGGGAVALLAAFLLWPRPTIRDTQEEPEPISTA
EVTPTPTPEPTPTPTPPPTPTPTPPPTPTPTPPPTPTPTPPPTPTPTPPP
TLTPTPPPTPTPAPTPTPTPVPTPTLTPIPRFTPLVPRTPTPTPTPIPTP
TSTPAPATPTPAPEFALSGQWLYEGGSFVWQGSLCKINVATGIQETVSIQ
QNGDQIIISSPSFSERSGQLIGNQLSVSGRIGGSGTPTVTWSGTVSSDGR
LIRGTATCGSASFAIRLTRQS
>CYA_1959 ISSoc3, orfB transposase
MIITYEYRILPSDDQAALMTEWLELLRRQWNDALGQRLDWLTATRCPIDR
CSLVSCPLPVSEAPLEPNYYRQAGSLKQIKQLFPAYRGIYAEVLQQNLMR
LDKAWKAWQVPDSTGKRRGRPRFKKAGELRSFTFPRINCPKAGAHLEGET
LRLSKIGSLPVVLHRPLPEGFVPKTCTVVRKADGWYVCITLEDKSVPLPE
PVPIKKAVGIDVGLDRFLTTSDGEVVPIPRYYRQAQKHLARQQRQLSRKV
KGSANWKRQATKVACLQLHVARQRKAFHYQVAHWLVGQYDLLVVEDLNVR
GLARTRLAKSILDAAWGRFLDILTAVAVKRGKQVLRVDPRGTSQNCCVCE
ERVPKALSERVHDCPRCGSWDRDLNAAIEILKRGLRAVGLPLSGCGGSWF
TSPLKQQLREVIPGSSRLQPVRA
>CYA_1289 ISSoc4, transposase orfB
MQRERLAYSQEVKNIPAEDLIALDQTGVWEGMERGVSRSLRGQRAYHYRQ
RYKGEKYTVIGAISLRGVVGCRVIKGGMKKGDFLEFLRSELCPKLDTRKV
VIMDNLNIHKSREVEELIRETGARILYLPVYAPELNPIEMMWSVLKHFIR
QLCRIGKYSMEQIVKTSLLLINPSSFRSWFAKCCYCTP
>CYA_0346 ISSoc2, resolvase
MARYVKPREAADYFGVCLHTLRRWEQKGWIHAVRTPSGRARRYDLDSYIG
LRPADANRAPKKDKRVVLYARVSSRGQKPDLERQIARLVDLYPGAEVVGE
VGGGLDFKRPKFLALLERVRAGDIGTIVVAHRDRLCRFGFEFVEWYCRQY
GCEILVLDDDHLSPQQELVEDILTILHCFSSRLYGLRKYRAAIEKDTDLS
GASAG
>CYA_0767 ISSoc1, transposase
MSQVLTISCKLKVSPSQAAKLDATLEAFGQALNWVNQNTPEKVANAVKLQ
SLCYREIRARFGLSSNLAQQVCRRVAGARKVARQRNRPVKEFKRRFVTYD
ARIFSFREKDWTVSLTTVEGRERFELAIGNYQRGMLAGSNPKAATLVQRK
DGSYYIQICVEKKPPKQQDTDKVIGVDLGRTDIAHTSEGDNWNGQQLNKV
RDHYSRLRAVLQRKASKGTRSSRRRCRELLQRLSGKERRFQAWVNHRISK
AIVSRAKATNSAIALEDLTGIRERVNQQPRSKTERRRANSWAFYQLRQFL
EYKARVAGVSLVLVPPAYTSQTCHKCLHIHPDPAQSYRSGKSFKCGHCGW
EGDADLNGANVIALLGAVVNQPRGSGLFCSLVEQNRLRATESPLRTA
>CYA_2064 ISSoc3, orfA transposase
MVVAGQDPVLVGDNHETVLAFSAMSYNISHRSVYSLQIHLVLVTKYRRRV
ITAPMLQRLEDIFRATCQKWRSSLVEFNGEADHVHLLVSFPPDVQVSKLV
NNLKTVSSRLIRKEFATEVARFYSKPVFWTGTYFVASCGGVTVEELKKYV
EQQATPRL
>CYA_1279 ISSoc4, transposase orfAB
MPTHSLDLRQRVVAAYQAGNTSIRQVAKRFMVTKRTVHRWVRQYQQTQDL
APKKAGTKRVGILEQHRQEVMAIITEHPDFYLWQYQELLRERLGINVSIV
TIHNFLKKQGMTLKKKTYRSAKVKEEEVQRERLAYSQEVRNIPAEDLIAI
DQTAVWEGMEWRVSRSLRGQRAYHYRQRYKGEKYTVIGAISLRGVVGCRV
IKGGMKKGDFLEFLRSELCPKLDARKVVIMDNLNIHKSREVEELIRGTGA
RILYLPVYAPELNPIEMMWSVLKHFIRQLCRIGKYSMEQIVKTSLLLINP
SSFRSWFAKCCYCTP
>CYA_0549 ISSoc3, orfA transposase
MVVAGQDPVLVGENHETVLAFSATSYNIGHRSVYSLQIHLVLVTKYRRRV
ITAPMLQRLEDIFRATCQKWRCSLVEFNGEADYVHLLVSFPPDVQVSKLV
NNLKTVSSRLIRKEFATEVARFYSKPVFWTGAYFVASCGGVTVEELKKYV
EQQATPRL
>CYA_0301 DNA-3-methyladenine glycosylase
MAAWEWLSKPAPLVAPTLLGMVLVRQFADGLQVRAQIVETEAYTAGDPAC
HAYRRKTRRNQVMFGPPGHLYVYRIYGLYHCLNIVTEAEGIASAVLIRAA
QLDCLPEWIPANKRLKPARVAAGPGLLCQALRIDGSHNGWRLEPVAAGQE
GIWLEGSPAWEAQFPIVQTTRIGITRGVELPWRWYIKGHPAVSHY
>CYA_2845 ISSoc4, transposase orfA
MPTHSLDLRQRVVAAYQAGNTSIRQVAKRFMVTKRTVHRWVRQYQQTQDL
APKKAGTKRVGILEQHRQEVMAIITEHPDFYLWQYQELLRERLGINVSIV
TIHNFLKKQGMALKKRPTAVQKSNKRRCKGND
>CYA_0729 cas1-1, CRISPR-associated protein Cas1
MIAKTTTKSLRSIPKVRDSISFVYVERCRIEQDAKAIAVLQEDGRYIIPC
ASLTTLMLGPGTAITHAAIKNLADGLCSVQWVGEDGLRFYASGSHPSSSV
ERLYHQAKLWADPVQHMEVVRRMYSFRFPEPLKEGLTLEQIRGLEGVRVR
TVYSRLSKETGVNWKGRSYKLKEWECADPVNRALSVANTCLYAVCQAALN
AVGYSTALGFIHIGKPLSFVYDVADLYKTEITIPVAFKAAAELMPNFESR
TRQLCREKFVEHRLMQRIIDDVDAILGFRATQEESSPVGSLWDNEKGAVE
GGVSYGEELDEEMSV
>CYA_0135 cas2-1, CRISPR-associated protein Cas2
MPGERQPRVRSNGAALRLWLVCYDVVDDKRRQQLAKRLEQCCQRAQYSVV
ECPLDTAELEKSWLPLLNLEEDSLQAYPLDATAKRRTKVFGGPLPYEPPD
YLIL
>CYA_0885 cas2-3, CRISPR-associated protein Cas2
MLWLVCYDVVDDKRRHQLAKRLEQCCQRVQYSVFECPLDTAELEEKLEKS
WLPLLNLQEDSLRAYPLDASAKQRTKVFGGPPPYEPPDYLIF
>CYA_2539 cas2-4, CRISPR-associated protein Cas2
MFLYVVTYDTPCDKRRKKIADLLEGYGKRVQYSVFECVLDKDKFEELKLR
LRKRVKPDEDSVRFYPLTSHALDQVEIWGGPPLTAPPHSIVV
>CYA_2545 cmr4, CRISPR-associated RAMP protein, Cmr4 family
MAFHLVYLTLLTPLHTGGTTQEGNLLGIAREAHTNLPYIPSSTIRGKLRA
SVAEKELKFELFGNEIGEGDQLTQGSIWIGDGSLLWVPVASLSHGVVWIS
CPLLLKRWLRLSGQKLQVPEPYSTNLEANRPIYLKDAILKNGLKKWENWQ
SFVKSSSISRVLVLPDQHCATLIQMSLWRQVKVKLSEHKVVEGGFRYEEA
IPPDSLMYFTWGVTAQANGSSQEAVEQFQKLLQKNQLLQIGGQESLGRGF
VELSWN
>CYA_2542 cmr6, CRISPR-associated RAMP protein, Cmr6 family
MTGNRPTRPGNAPQPLPRPPRPGDPSRRPPQENRGPNSPRGGNGGGNQPR
GGGGNNPPPSPWLGHPLDPTPRPDPTAGFIEYLRWMRAPLDASKDGTKAE
LAHQVETTINLGARLKVLNERTQRIASDTFQVTCPWRIRVGGAKGPESML
LPAFDPLGIPYIPSSTLCGVARSQAIRELMQERNLSWEQADKAVAPWFGH
LQADEKDRAGKVIFLDAYPVPTRPQRREDPDNSKTGGLAVDIANSIWKWN
GKNLDYSPNPNLFFSLKQATFLIGLRKGPGCTDEMLDQVKEWLIQGLEQG
VGSQVNTGYGRLIPLGKSLDKSQGEFLRLPFELKGQLIHGRQVVNWRPDK
NRYDNRSIAEVRPVAFKNMLRYWFRTFALGVLPVDQVQEWEGQLFGAITP
QQKHGWIHVDLLNGKVSRPEPNQRGEAAGQQEGILILSLSGECQNYASQE
DQEAVEKLFTNLTWMMFHLGGVGQGARRPCYSRQNRERAPWWRGSTLIPR
SEDAFWKLAESVAGFQKLFQKRLGNFFDALKTLTKQAINPDSPRSAGQVQ
RDKWPQAVDANCRIVVCSGEEDFNKPYALATLHRLGRQDEGRYDKFLCGG
VQGGALPSPVWIADLGDYQVVTVFGATADPRKKYLEELKKDADDFQVIWP
LR
>CYA_0001 dnaA, chromosomal replication initiator protein DnaA
MDISLDRLWDEALGHLQVQLSRPTFEAWIKTARAESLVDNRLTISTPSEW
ARGWLQKHYASTITEVVQRVAGIPLQVEFSVAPQALVEEEAPSTAVASTS
RKAGSFPASAPLGLEVSGSLPMRAPDLNPKYSFSRFVVGPNNRMAHAAAL
AVADKPGRAYNPLFLCGGVGLGKTHLMQAIGHYQLEANPRAKVFYVSTER
FTNDLIDAIRRDSMQSFREHYRDVDILLVDDIQFIEGKEYTQEEFFHTFN
TLHESGKQIVLAADRSPHLIPRLQERLCSRFSMGLIAEIQPPDIETRMAI
LKKKAEYEGMILPPEVIEYIATTYTSNIRELEGALIRAVAYVSISGLPMS
VETIQPILNPPSEPKEITPDMIIDVVCEEFGVDRESLLGSSRKRDISQAR
QIAMFLMRHHTNLSLPKIGDYFGGKDHTTVLYSCEKVSQLQRENLQFERQ
LQNLAQRLRVMANSRNR
>CYA_1550 dnaB, replicative DNA helicase
MISDYDLTGGDRLPPQNIEAEEEILGGILLDPEAMARVAELLRPEMFYLS
AHQEIYRAALQLYSQGQPTDLTTVSAWLADHQLLERVGGTAAIRRLVEQT
VSSVNIDQYARLVVDKYMRRRLIQVSNTLARLAYDTSQPLPQLLDRAEQE
VFSLTQERVQRSLVPASEVLVNIFSELEERFQSGAQIPGIPTKFIDLDNL
TQGLQRSDLVILAGRPSMGKTSLALNIAQNVAAYVKQPVAIFSLEMSREQ
LVQRLLASEARIDSSRLRSGRISENEWQRLGQAIGFLSQLPLFIDDTPNC
TVTEIRSKARRLQVEQGGTLGLVLIDYLQLIQGSESDNRVQELSRITRGL
KALAKELMVPVLVLSQLSRAVESRSDKRPQLADLRESGCLAGDTRVRDVD
RGKIWRLEQLAALPPSAELPRLLSLNGRGRLVPQQPVRVFCSGRQPTCLL
KTRLNFSIRATGNHPFLTRDGWKTLDELQLEEEVAVVVQEGLIWDPVVFI
SEPGEPQPVYDIEMPRHHNFVANGLLVHNSIEQDADVVMMIYRPEYYDPN
TSDRGIAEVIVAKHRNGPTGTVRLLFESQYTQFRNLADPYR
>CYA_0057 dnaE, DNA polymerase III, alpha subunit
MAFVPLHLHSEYSLLDGASQLPLLIEQVVAMGLPGLALTDHGVMYGAIEL
VKLCKSKGIKPIIGNEMYVINGDIRDKSRKYPKYHQVVLAKNTQGYKNLV
KLTTISHLQGVQGKGIFARPCINKEYLAQYKEGLIVTSGCLAGEVPQAIL
QGRPEIARQVAAWYQEQFGDDYYIEIQDHGYREDRFVNVQLVRIARELGI
PIILTNDSHFISCWDVEAHDALLCIQTGKSLTEKNRLRYSGTEYLKSPEE
MRRLCRDHLEQEVIDEAIANTLKVLEKIEGYDLFGETRMPDYPVPPGHSA
DSYLTELAWQGLAKRCGVAYPDQIPENYQERLRFELNIIQQKGFSSYFLV
VWDYVRYAREHGIPVGPGRGSAAGSLVAYALQITNIDPVKYGLLFERFLN
PERQSMPDIDTDFCIERRGELIDYVTRKYGQERVAQIITFNRMTSKAILK
DVGRVLDIPYAEADKMAKLIPVSRGKPAKLEEMIGENTPAPEFKEKYEKD
PTTHRWIELARLLEGTNKTFGVHAAGVVISKDPLDEIVPLQYNNEGQIIT
QYSMEDIESLGLLKMDFLGLRNLTMIQRAVELIREHRGVTIDLDNLPLDD
EKTYQLLEKGELEGIFQLESSGMKQVVRELKPSNLEDISSVLALYRPGPL
DTGMIPDFIDRKHGRKPVTYAHDLLKPILQDTYGAILYQEQIMRIAQDMA
GYTLGQADLLRRAMGKKKVSEMEKHREQFVRGAVERGVAKEVATELFDQM
VAFAEYCFNKSHSTAYGLITFQTAYLKANYPTEYMAALLSSVGGDQDKVQ
RYITYCLSIGIQIEPPDINRSGLDFTPQGSSILFGLGAVKNVGEGAIQNI
LAARQAGGPFTSLADFCQRVDLHVVNRRAIESLICAGAFDGISGNRKQLM
ADLDPILNWAAEQAKSKAIGQASLFDLLGNDQGFIEAPRGPATEDFPPQE
KLRLERELLGFYVSDHPLRRIQEQARLLAPVNLSDLSGYAADTSVGILAL
LTAIKTVTTKRGDRMAILQLEDLTGSCEAVIFPKTYERLRHRLEVDQRLF
IWAKVDQRDEQVQLIVEDLQPIESVSWVTVELPLDSAGTLEDRYRLQTLL
ARQRSEAKEENRIPVVAAIVAPPHTLWVRLGSQFWVKDAEATVAALRQAG
YTARSEALASR
>CYA_2329 dnaG, DNA primase
MSSLPPEFIQLVRQKADIVEVVAEKVVLRKQGKNFVGLCPFHNDHKPSFQ
VSPSKQIYKCFACGAGGDVIRFVSQIEGLSFAEAVRHLARRYHVPEPKES
LSQDYERQLSHREKLLEILALAADFYRHALRSQIGSAARQYLHSRHLSEE
TLQKFQIGFAPPGWHSLYEYLVNQKRQPVKLLEEAGLLAPRQQGSGHYDR
FRNRIMLPIFDLQGRVIGFAGRALGEEQPKYLNSPETELFNKGQVVYGLN
FAREAIAKADQVLVVEGYFDVIALHQAGIAYAVAAMGTALTPHQVKTLLR
YTQSKRLILNFDADRAGLNAAKRAIEAIEEQARRGEIELRILTLPAGKDA
DEFLRQHSVSAFEALLAQAPLWLDWQIDQVLAGRDLAQGADFQQAYQALV
QLLAGLGGQWRSLYTHKVAELLSRGNARLCRDLEEDLRRAVRQYRWSKPR
QLAAPKGCKLLQSESHLLQIFLHFAEYRREIRQTLMERELQFSFRPHREL
WQRILELLSAQPELEDQGEGLLTALRTLCAQDEDLNERLSHLLWLDENTR
VALMRPRLVVRAALANMELEIRQKRYRYWTQLWDQAFSEGNTALAAQYQA
SIQQEYQAIQALQRQVQLNLEDLLEAPLAED
>CYA_1647 dnaN, DNA polymerase III, beta subunit
MVQAQRPADWEVETGSPASAPRDGRSGDPFPVNRTESFGKAVDLPAGCLC
FTCEQAELSHHLAAVSRAVASRPALPVLANVLVEASAEAQRVALTAFDLN
LGIRSEFEAEVKGSGRTTLPAKLLSDIVSRLPSGPIGLSQVPESAAVTLT
SAAGQYQLRGMPAEEYPTLPEIAPRTADADAEEESLAAQILELPIESLLQ
GIGQTLFAASGDDTKQVLTGVHVKLLTGDPPRLEFAATDGHRLAIVQVEA
EGIPVDLAAGGTKLDFTIPARTLREVERILGAQTAASAVELRFDRSQVQF
ILPPGAGSAQCQQRITSRLLEGQYPDYNRLIPRQFERHVTLERRPLIESL
ERVGVFAAQRNEIIKFNLSEATQTLRISTEAPDVGSGEESLPVQMSGPDL
ELAFNVRYLLEALKVFHTQQVSLELNGATQPAIWKPIGATRLCYLVMPVQ
LRAT
>CYA_0563 dnaX, DNA polymerase III, subunits gamma and tau
MAVAGKYEPLHLKYRPQRFAEVVGQGAVVQTLANAIRLGRVAPAYLFCGP
RGTGKTSSARILAKSLNCEQGPTPDPCQVCSQCRAITAGSSLDVIEIDAA
SNTGVDNIRELIERAQFAPVNSRYKVYVIDECHMLSNAAFNALLKTLEEP
PPRVVFVLATTDPQRVLPTIVSRCQRFDFRRIPLDDMVAHLGQIAAQEGI
PIAPEALHLVAQLAQGGLRDAERLLDQLSLLEGSITPEAVWDLVGGIPER
QLLDLTDALLAQDVQAVLAQTRQLLERGREPLVVLQSLVVFYRDLLLAKT
APQQRQLAAVTDPTWAALQQRAPRYSVEMLLAAQSHLRQCEPQIRQSGQP
QLWLEIALLDLLGQLRQSAVPLPSIEAKGGEPLPAVGPPTVGKTPSPTVP
ASEELTAPTTTLPETPAPSPAATGGSLPPSQTAKPSREKPASPEKAKDPH
PLKLLRPRWEEFLENLRPITRGLLASGYLQQESLVGSDGTETLEITLAFP
NKGLVDKVRSKEAELCSALHNLLQRPVRLNLVVQQGPSSRHREGSAGETS
GREKAPPLAPAKLQSRTPRGDNLPKDLSPSPKAGSQSYGRVGQPPPAEPE
TPGENSIPPAQAAKPPSYHLAHELAEVARRFADHFNGSLIDLQGILASPE
EATAELSALESLEAEGSPDLGEAYGPPATQSPLAPAEEELPF
>CYA_2512 dprA, DNA protecting protein DprA
MLFPSSPADNAGRPGSCRGEQERPYWLAWAQIKGIGPHRLKRLAEFFGSL
KQAWQADALDLQQVEGIGPTLAQAIVSARPGLDPEEILEQTQKPGIPFLT
PADPGYPPLLWELPDPPPLLYVLGECPDWQQPAIAVVGTRAPTSYGRLWT
QKVSAALAEAGCVVVSGLATGIDGIAHQACLEAGGKTVAVVGTGVDQVYP
AHHRSLYRRILEQGAVLSEYPPGTPPAKEHFPQRNRIIAGLCRATLVMEA
PERSGALITAHLANHYGREVYALPGNIDTAAARGCLQLIRNGAGMILGIE
ELLQELDLVQGSPPPEQPPSFGPSDPQQQLLWQLLGNEILSLDALVQATQ
MDIATLSSTLLLMELEGWLVQLPGMRYQRAR
>CYA_1415 gyrA, DNA gyrase, A subunit
MTARIISTDLQREMAQSYLEYAMSVIVGRALPDARDGLKPVHRRILYAMH
ELGLTADRPFRKCARVVGDVIGKYHPHGDQAVYEALVRMAQDFSMRERLV
DGHGNFGSIDNDPPAAMRYTECRLTAFAQEALLQDIDANTVDFIDNYDGS
QQEPLVLPARIPQLLLNGSSGIAVGMATNIPPHNLGELVDGLIALIHNPN
LTSLELMQWIPAPDFPTGGLIMGQEGIREAYTTGRGSITLRGVATVETIE
QRGRPTREAIIITELPYQTNKAAMIEKIAELVNEKKLEGIADIRDESDRE
GMRVVIELKRDAQPQVVLNNLYKQTPLQSNFGVNMLAILNGEPRTLTLRD
ALQAFLDFRAEVIERRTRYELQKAEERDHLLQGYLLALGQLDRVIALIRG
AADATTARAELQATLGLSEAQADGILQMQLRRLTALEAEKIQAEHEDLVR
QIADLRDILARRERVMQIISEELQQLKSRFASPRRSRLCLEDCELKVADL
IENRETVIFLTEQGYIKRMDLEEFQVQGRATRGKAGARIKDDDAIEQFFA
CRSHDTILFFTDRGMVYTLPAYEIPQGSRTARGSAIVQLLPITREERVTS
MVPVSEFSDDEYLVMLTRAGYIKKTALSAFANVRSNGLIAISLEENDELR
WVRRARSSDDVVMATRQGMCIRFRADDEQLRPLGRATRGVRAITLNPGDD
IVSMDIIFAESVMAAEREGERLANPWVLVITKEGRGKRSAIDHFRRQNRG
GKGVIATKFRQESDELAALRIVNAEDEILLVTARGIVMRQLAKAIPTQSR
EATGVLVQRLDPEDSIVGVTVVPASFIRDPAEAEEEPAEGIPEADG
>CYA_1523 gyrB, DNA gyrase, B subunit
MTENYGAEQIQVLEGLEAVRRRPGMYIGSTGPKGLHHLVYEVVDNSVDEA
LAGYCNEIEVTLHPDGSVSVLDNGRGIPVDIHPKTGQSALVTVMTVLHAG
GKFGGGGYKVSGGLHGVGVSVVNALSEWLEARVWREGKVYFQRFERGAVV
GSLQSEPQPAGAQRRGTEVRFKPDELIFPEREFDYSLLAARLRELAYLNA
GLKIIFSDLRRDPPHREVYQFAGGIKEYVAFINHEKTPIHPDIIYVRGER
DGVEVEAALQWCADVYTDTLIGFANNIRTTEGGTHLEGLKTALTLTINSQ
ARKLNKLKDSDSNLAGENVREGLTAILAVKVPNPEFEGQTKTKLGNTEVR
GIVQTLVSEALTEYLEFNPNVARGIVEKAIQSFNAAEAARRARELVRRKS
ALESSTLPGKLADCSCRDPAESEVYLVEGDSAGGSAKQGRDRQFQAVLPL
RGKILNIEKADPAKIYKNAEIQAMITALGLGVKGEEFDPSQLRYHRIILM
TDADVDGSHIRTLLLTFFYRYQKALLEQGYVYIACPPLYKIEWGRNNVRY
CYNEAEKEQVLRSLPANTKYTIQRFKGLGEMMPEQLWETTMNPATRVLKQ
ITIEDAAEADRIFTILMGDAVGPRREFIEAHSAQLDLAALDI
>CYA_1511 holA, DNA polymerase III, delta subunit
MPVYLYWGDDTYRLMQAVHQLREQVLDPDWAAFNYDRLPPESTLAGLNLA
MTPPLGSNARLVWLEETTLTQDCPEEWVRELERTLASLPPTTHLLLTTRN
KPDGRLKSTKLLKQVALAREFPQLAPWDEEGILRQVYSEARQRDLKLSPE
AAQKLAEAVGNDSRRLAMELEKLALFTVNQRDPISPEQIEALVPASAYNS
FQLAASLRQGNLDQALRILAHLLDHNEPALKILAVLVGQFRTWLWVKLLL
EEGERDPKVIAQKAEIANPNRVYFLQKEVGSLKSSALLQVMQQLLQLEYQ
LKQGQPEREVFQEALIQIVAILQKS
>CYA_1270 holB, DNA polymerase III, delta' subunit
MVEGVTVLPPQHIVGQELAARLLVAALEKGRVTSSYCFLGPEGVGRSLMA
RWFAQALFCEASSGIPCGQCSNCRWLLAGTHPDLHWVSPTYVHQGRLIAA
DAPEAQALQRRSPPQIRLEQVQEVVRFCARRPMHARRSLVVLEGAETLTE
SAANALLKTLEEPEPAHIVLIASHHSPTPPPHPLPPTLLSRCQMVPFRRL
SSAEMEQVLTALGCPELPGIPRSELIALAQGSPGRALAAQQHLQSLPPSL
LQDLRRWPHSLRQALEVARAVAALDLPAQLWLIDYLQQQFWAQGSRQAIR
QLEQIRQQLLQFVQPRLAWEVNLAGFDSSGNPSPVAK
>CYA_0305 hup-1, DNA-binding protein HU
MASPHLNRRLLARQMAAQVDGLTVKMAAAALEAMLDSISQCLAEGGSVRL
ARFGTFLLRPRPARQTYHPRTKAPVHIPAAQVPYFVPSPELGHPRRERRG
DLEAPPSV
>CYA_0940 hup-2, DNA-binding protein HU
MNKAELVDAVAHRANVTKKEAEAVLTAALEIIVEEVASRDENGEPKGKVT
LVGFGSFEARKRKQREGRNPKTNEKMVIPASIVPTFTAGKTFRDAVAGGH
KSSGV
>CYA_0803 ligA, DNA ligase, NAD-dependent
MDPKLEQRARELRALLQKASIAYYVHDAPILEDSVYDRLYRELQELERAY
PELITPDSPTQRVGEKPAEQFPTVSHRIPLYSLENAFNLEELKEWQERLW
RVLGRTPEEGELEYVCELKIDGAALALTYVDGLLQRGATRGDGQSGEDIT
PNIRAIPSIPLRLATAAPPPVLEVRGEAYLPIAEFERINRERCSAGDPPF
ANPRNCAAGTLRQLDSRVVAARKLSFFAYALHWPEGWPSGDPPQTQWECL
QRLKDLGLPVNPLSQVCRGLEEVVQFYERWRQAQLPYACDGVVVKLNSLR
LQEEAGFTQKFPRWAIALKYPAQEVPTRIRAIVASVGRTGAVTPVAELEP
VLLAGTTVSRASLHNADRLEELDVHIGDTAIVRKAGEIIPEVVGILKELR
PPDAVPYRLPSHCPECGTLLVRPAGEAITRCPNPACPAKIRGQLQHWASR
DAMDIEGLGEKRVAQLVEKLGVRTVADLYRLTPEHLESLEGMGSRSSQKL
VQAIQRSRQQPWERVLYGLGIPHVGVVTAQILAQHFPAPELLAQARAEDI
AQIYGIGAEIAEAVVAWFADPAHQKLLQELRELGIPALPRQAAPAVSQVL
AGKKFVITGTLPTLSRQQAKAWIESRGGKVTASVSRQTDYVVVGSDPGSK
LKQAQALGIPLLSEAELLALDPK
>CYA_1763 mfd, transcription-repair coupling factor
MSFIPLVRFLAQSGLMQELAARLRSQRQADLQGAGRIPKGLIASALAQQE
GRSLLVVTATLEEAGRWTAQLEGMGWESVQLYPTSEASPYEPFDLEPELV
WGQFQVLADGLQGKKGMAIVATERALQPHLPPPEVFRAFCLKLEPGLEMS
PQQLGQQLARLGYRRVSLVESEGEWSQRGDILDVFPVACEWPVRLEWFGN
ELERLREFDPVSQRSQDGIPYVWLTPTGYGPILWPALQEKADQLSQGLRQ
QLEQSPTPPEGLRRFLGLLYTPPANLLSYLDPTTLILIDEPEQCQAHSQQ
WLYHAQEQWKQAQVAEPALQPFHRPFDLHAPDWDPFPCLLARTFAPAGEA
EAALDLKSRAVPAIPHQFGSLAKTLREYRKQQLQVWILSAQPSRTVALLQ
EHDCPAQYVPNPKDFPAIERQLQSYTPVALKYSSLADLEGFLLPTLGWVV
LTDREFFGQHSLATPTYVRKRRQASSRQVDPNLLKPGDFVVHKAHGIGQF
LRLESLTIGGETREYLVIQYSDGLLRVAADQVNSLSRYRASSDGPPALHK
MSGSTWEKTKQKVKKSLKKVAFDLLQLYAKRAEQEGYAFPPDSPWQQEFE
ESFPYPLTPDQIRAVQEIKRDMESPRPMDRLLCGDVGFGKTEVAIRAIFK
AVTAGKQVALLAPTTILTQQHYHTLKERFAPYPIQVGLLNRFRTPEEKKE
ILARLKSGELDVIVGTHQLLGKDVQFRDLGLLVIDEEQRFGVNQKEKIKL
LKTQVDVLTLTATPIPRTLYMALSGLREMSLIQTPPPSRRPIKTHLSPYN
PEVIRTAIRQELDRGGQVFYVVNRIEGIEETSAKLREWVPGARIAIAHGQ
MPEGELEATMLAFNNGEIDILVCTTIIESGLDIPRVNTILIENAQEFGLA
QLYQLRGRVGRAGIQAHAWLFYREDGILTEEARKRLQAIQEFTQLGSGYQ
LALRDMEIRGIGNLLGTQQSGQLNAVGFDLYLEMLQEAIREIRGQEIPQV
EDTQIDLNITAMIPQSYIPDEDQKMQAYRQLAAAGSRVELLQIAQEWQDR
FGPLPKPTQELLRVMELKILARTLGFSRIRPAKEHVLLETPMEEPAWNRL
KEALPAHLQSRFVYQPGKVTVRGLGMVPAAQQLENLLQWLDKMSLALMEA
RIPTAT
>CYA_0203 mutM, formamidopyrimidine-DNA glycosylase
MPELPEVETVRRDLQRLTLGLCILSVEVLLPRTVAYPGKDEFAQGLAGSC
LTQWQRRGKYLLGSLDSGAVLGVHLRMTGQLLWVQGSAPLPIHTRVRLHL
EQGWELRFVDLRTFGQMWLVPAGVEPETVIPALQSLGPEPLSPAFSEAYF
QAALQKSRRPIKAALLDQSLVAGVGNIYADEALFLSGIHPSTPAAQLSDA
AKSRLRESLIQVLRAGLEQRGTTLRDYRDLRGLNGNYQGQAWVYGREGDP
CRLCGTPIQRSKLSGRSAHFCPRCQPPPGRVET
>CYA_2035 mutS, DNA mismatch repair protein MutS
MDPALLTPMMQHYVELKRQYPHAILLYRLGDFYEMFFQDAQLVSRELELV
LTGREAGAIGRVPMCGIPYHAFDRYAAQLVAKGYALAVCDQMEPADQAKG
LVRREVTRVITPGTVIEEELLQARQNNYLAAIVRLRGSKQTVWGLAYADI
STGEFWVCQGEGQEQLEQELARLQPAEILLPTEEGLGLGLMRPGDPQAPL
GLPGQYTYTLRPAEPFELATARENLLQTYGLRSLEGLGCEGLPLAIRAAG
GLLHYLEETQKNLVQPSPQGGHPLLRPPRTYQLTDYLILDTQTRRNLELT
QTIREGAFVGSLLWVLDRSRTAMGGRTLRRWLLQPLRDPEQIRLRQDTIQ
ELLESPSLRTRLGSLLDSLYDLERLANRVASGTANPRELVALGSSLGKLP
QLAELVAEAQTPLLQSLQQVDPALVDLGHRIEHTLLPSPPPVLTEGGLIR
PGVDAELDRLRQQVEQDRHWIAQLEKTERERTGIPTLKVGFNKAFGYYLS
ISRAKAQQVPKEYIRKQTLTNEERFITPELKEKEARILTAQTEINQREYE
LFVQLRQEAGSQAAAIRQVAQTLAAVDALFGLAEVAVQQGYTRPVITADR
RLIIEEGRHPVVEKSLPQGLFVPNSVRLGSPHGPDLIVLTGPNMSGKSTY
LRQIGLIQILAQMGSFVPARRAELGLCDRVFTRIGAVDDLATGQSTFMVE
MNETANILNHAGERSLVLLDEIGRGTATFDGLSIAWAVAEYLATQVRART
IFATHYHELNQLETLLPNVANFQVVVKELRDRIIFLHQVQPGGADRSYGI
EVGRMAGLPQPVIERAKQVLALVEQHSRIGLGLRSQGKSRPSSNNPKKRF
KQESNSRGIPDCDAKAGDQLSLIPTSLYPEEL
>CYA_0809 mutY, A/G-specific adenine glycosylase
MQRLRQSLQRWYCQQGRDLPWRRTRDPYAIWVAEVMLQQTQVATVIPYFQ
RWMEALPGIPELATAPQQQVLKLWEGLGYYRRALNLHRAAQILMQEHGGQ
FPRNLEQVLALPGIGRTTAGGILSAAFDLPLPILEGNVKRVLARLVALPQ
PPARCLPLLWRLSQQLLDPEQPRTFNQALMDLGATICRPRQPRCGQCPWQ
ADCAAYNRGQQQHLPMSEHRPSRPHKQIAVAIVLRGKEILIDRRLESSML
SGLWEFPGGKIEPGETPAECVVREVKEEIGIDIEVVAPLATIEHAYTHFT
ITLIAFICRYLRGEAQALQCSEVRWVEPAELSQFPFPAANQKLFPYLYAW
LEARGHLL
>CYA_2169 nrdJ, ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent, intein-contatining
MVQSKEAHSPAIQGLGMGSLGEFPATAPAAAPVFYRTYSRRRPDSSRETW
SDVCDRTLADIARLGRFTPQERELVERLQRQLKALISGRALWVMGTDWIQ
KPENYSGAYNCTSLTVVDWRSFGLMMDLAMMGCGTGAVLEPQFINRLPPI
LNRLQVQVVGSIGATPRHSRQEHTPIQRQGSRVHIQVGDSRRGWVESYQA
LLELAADPSFGGQVEVTVDLSHVRPAGERLKGFGGVANPIKLPGLYQRCA
AILNKAVGRQLNSVECCLLIDEAAATVVAGNIRRSAGMRQFAADDELGSS
AKDNLWQQDEQGNWRIDPERDALRMANHTRVFHRKPTREECIAAVRKQFY
SGEGAIQWAGEAVARANADLINTPELKREFLNVYASEGPEGARRWIEERQ
AASSSPSVQPPTWHRVQRYGLNPCVTADTWIHTGDGPRQVKDLIGKQHST
YVNGELFSTTPEGFFYSGTKPVLKLVTQEGFSLRLTGNHRVLKVIAQTPK
AQYTEWVPAEELRPGDRILLHNHRDLTPWDGEGTWEEGWLLGNLLGDGSL
ATTQGNDTAVLRYGQDTQQERSLHAAQVLQAAVGYEPRRPETCYHPKLKC
WVIHSTGLARLAAKFGMAPGQKQMTAALEATSFDFHRGFLCGLFDADGSV
QGGQEKGVSVRLSQSNLDTLKAVQRMLARLGIVSAIYENRRPAGYRLLPD
SKRQPAPYACKVQHELVISGDNLHQFQAVVGFREPRKAQKLGELLGSYQR
RLNREWFTVTVAALEPDGVEPVYDCTVPGPSCFDANGLVVHNCGEIIGCD
FHCNLAEIHLNRLDPHNRQEQEEAFTAGALSAAALLHHRFVEPRFQRSRE
WDPIVGVSFTGLFDFCVKAFGVDWLRWWQEGRPDTPLGREFKQQEREYLS
FWKEVVHRVVWDYCDRHGLRRPNRCTTVQPAGTKSLLTNASPGWHPPKAQ
RYIRRITFAKNDPVALACLDYGYSVVPAQSDKDENGNLLNDPFDPRCTEW
LVELPVEVEWANLPGAEEIEIERFSALAQFDFYMQVQKYYTTHNTSATLE
LREDEIEALGSRIYEAIRDDEGYISAALLARFDAPFPRLPFEKIDKATYE
RLMAEVKQRRKVDNFYEALARYDRNLALTAEGPAGCDALGCLMPEASPQG
ENLSR
>CYA_0912 nth, endonuclease III
MSGKRALRQRALEILIRLKRHYPNSTCALHYETPLQLLVATILSAQCTDE
RVNQVTPELFRRFPDAQALAAAPREEIEALIRPTGFYRNKAKHIQEACRK
IVTDFGGQVPRTMPELLTLPGVARKTANVVLAHAFGINAGVTVDTHVKRL
SRRLGLTEHEDPVRIERDLMQLLPQADWENWSIRLIEHGRAICTARKPLC
EQCFLADLCPSAPLPGPAEKTDREAATASQT
>CYA_1321 pcrA, ATP-dependent DNA helicase PcrA
MLDALNPAQRQAVHHFCGPLLVVAGAGSGKTRTLAYRIAHLIRHYRVDPE
EILAVTFTNKAAREMKERIEQLFAEQEAQEQFGIPLEELEPAQATRLKSA
VYHRWIKPLWIGTFHSLFAQILRLEIEKYQDPKGRKWTRNFSIFDESDAQ
SLVKEIVTKQLNLDERKFDPRSVRYAISNAKNQGWTPADLERHQPNFRGR
ILAQVYELYEDQLAANNALDFDNLIWIPVQLFRQNEQVLAYWHQRFRHIL
VDEYQDTNRTQYELIRLLATNGETRRSEWDWTNRSLFVVGDADQSIYRFR
GADFTILLEFQETFGDGLPDDDTRTLIKLEENYRSTATILQAANVLIEKN
TERIDKILRPTRPPGHPIVCYQAEDEMAEAEFVVNTIRRLHSQNPNSSWG
DFAILYRTNAQSRPFEEVLLRWGIPYTVVGGLRFYDRKEIKDVLAYLRVV
LNPADSFSLLRIINVPRRGIGKSTLDKLSEAAAALNVPLWTILSDEASVT
NLLGRSAKPVLQFAQLIQHWHRQMAQVSAAALLEGLLRDCGYLEDLKAQG
TEEAEERIANVMELYNAARQFEEEQEDPSLEAFLSNVSLASDLDTLQEGA
EKVSLMTLHASKGLEFPVVFLVGLEQGLFPNFRALEDPAALEEERRLCYV
GITRAREQLFVCHASERRLYGNREPAIPSLFLSELPQELIQWEKGRGLSF
SADNTAAATPKAKAARRQGRSSQWAVGDRLQHPQFGQGQITHVFGSGERI
TLAVRFPAIGQQKILDPRIAPIQKLS
>CYA_0303 phrB-1, deoxyribodipyrimidine photolyase
MAVLLWFRTDLRLLDHQPLTRACQQGSFLIPLYCLDPRHFGRTAFGFPKT
GPFRAQFLLESLADLRQQLRARGSDLVIRQGQPEQVIPALAREWGVKAVY
AHEEVGTEEEAVARALQQALQPLGIPLHLEWGHTLYHPADLPFALADLPE
VFTRFRQQVEAKAAIRAPLPIPSLPPLPPGLDPGPLPTLAELGLSLPPPD
PRARFVYAGGSTAAQARLQTYIWDLDRLRVYKETRNGMLDPNDSSRLSAW
LALGCLSPRTVYAEVKRYEEERVRNESTYWLVFELLWRDYFRFILAKHGA
KLFCPAGIQGIPIPWQQDGDRFQAWCRGETGYPLVDANMRELAATGFMSN
RGRQNVASFLTKNLGIDWRLGAEWFESLLIDYDVASNYGNWNYTAGVGND
ARGFRYFHIPKQSRDYDPQGHYLRHWLPELAGIPGDKIHEPYRLSAAEQK
QFGVRLGVDYPRPVVDLGKSLQASRRAYEAALARYRRG
>CYA_0780 phrB-2, deoxyribodipyrimidine photolyase
MTSLVLLWHRRDLRLGDNTALHGAAQRSPQVVPVFVFDPQLLQRADMAPA
RVAFLLQALQELQERYAQMGIPLLWRRGDPAVELRQLAAELGAQAVFWNE
DLDPWARQQESRVRASLAEAGIPSFSYQDMLLHGPGEVLTQAGEPYSVFT
PFWRRWSSLPKPDPFPIPKSLQAVSSLKAQPLPSLADLGFVCNQRIPAAG
ESVAQGLLEDFCQGLRIFEYGRARDFPAEQGTSLLSPHLCWGTIGIRRVW
QATCEVEAEARSEEAESSLKTWRQELCWREFYKHVLVHWPHVESGAYRRA
FDALEWDNRQDWFQAWCAGQTGYPIVDAAMRQLNETGWMHNRCRMIVASF
LTKDLLIDWRWGERYFMQKLVDGDLAANNGGWQWSAGVGTDPRPLRIFNP
ATQAARYDPEGEYIRRYLPELAGLDTPALLWVGDDPKGSWALQERRRCGY
PDPIVDHKVQQQEFKRRYQAVQQGRSQPD
>CYA_0531 polA, DNA polymerase I
MASHPQTLLLVDGHSLAYRSFYAFAHSREGGLRTSTGIPTSVSFGFLKSL
LEVLEKYPPTHIAVAFDTRQPTFRHEADETYKAGRPETPPEFVEDVENLQ
QVLAALRIPILAVPGFEADDVLGTLCRLAPQEYRVQILSGDQDLFQLIDP
EGRIRVLHLNSKDRVSEFGPQEVKEKLGIWPWQVVDYKALCGDPSDNIPG
VKGIGPKRAAELLQRYGSLEEIFNHLGEIPGKIQQYLREGIPAAQHSQFL
ARIHCDVPLSPDWESMRLTGFDPEEVLPLLEKLEFRSFIAQVRKLQATLG
GIPAQASQARTTSKDGSTYDEALWFDFPAAPAPSLPAVCIVDTAEKLELL
RQELLACSGIVAWDTETTSLDPRDAQLVGIGCCWSERDVAYLPLGHRQGS
NLDWDLVKQSLQPIWEDPNRPKSLQNCKYDLSIFRAHSIRLQGIQFDPML
ASYVLNPEASHNLADLAASYLNLPTTSYEKLLGKAESLADLPIAKVAEYC
GTDAYCAYRLVPILTEKLQQTDPRLWNLFVQVELPLAHVLEEMEWVGIRI
DTEFLRQFSQELEKELHSLEQKAYAQAGEVFNLNSPKQLGSLLFEKLKLD
VRKTRKTATGYSTDASVLEKLEGDHPVIETILQYRTLAKLKSTYVDALPA
LVRRDTGRVHTSFNQTVTATGRLSSSNPNLQNIPIRSEFSRRIRQAFVPQ
EGWLLASADYSQIELRILAHLSQEPTLIECFRSGEDVHTLTARLLFEKQE
VTSEERRLAKTINYGVIYGMGAQRFARTAGVSLAEAKEFLRRFNERYAGV
FAYLRATEAFVEKHGYVETLLGRRRYFPNLSQLSGHRKQAELRAAVNAPI
QGSASDIIKVAMVRLQEKLQNFRSRLLLQVHDELVFEVEPSEWQDLRPLI
QREMEEAVPLSIPLVVDIQIGHNWKEAN
>CYA_1466 priA, primosomal protein N'
MWVDHPHLGGCFTYRVPEGWEPEAGDLLSVPFGQQVAGAVALGWRSELPT
GVDPQSVREIEAVVAKGILPKDFWPLLQRVANYYLTPLAQVVRTVLPPGL
LSRSQRRIRLVGSPPGECSPAAQALLRLLREKGGELSWRYLQQQVPGAEV
ALRELQRRGWVESFWQEQQGGRVKTQQAATLVEDSLEGLSLPQQKALQIL
KQKGGELLLVEWERLAGVSRSVLQSLARKGRVHLYERPLLRLGEAERPVE
KDLPKPLTPAQAEAVAAIQQALGRNQRFLLHGVTGSGKTEVYLQVIAQVL
QQGRSALVLVPEIGLTPQLTDRFRARLGSRVWTYHSGLSAGERYDLWRQM
LVAVPQVVIGTRSAVFAPLANLGLIVLDEEHDDSFKQDQPQPCYHARQVA
EWRAELANCPLVLGSATPAVETYAVHLQDPQRWVRLPLPQRIPQAGIPAT
LPRLELVDMRQELQAGNRSILSRRLHQALHETLKRGEQAILFVPRRGHST
FVLCRSCGFVLTCAHCDVSLTFHLEGGQELRCHYCGARQPHPQHCPACGS
PYLKHFGTGTQKVVEVLQQHWPQVAILRYDSDATRRKGSHRDLLEQFRSG
KAQVLVGTQMLTKGLDIPQVTLVGVVAADGLLHQPDYRAGERTFQLLTQV
AGRAGRGSLPGQAIIQTYLPEHPILQAVLAHNYEGFVQAELRQRQEGGYP
PYRALILIRLSSSRLEALERYCSRLAEGLQGIPAEVLGPGPARVERVAGR
YRWQILLKQLPDQPWDRAQIDTHLRRALGHIPQGIRVSLDVDPLRIL
>CYA_1690 radC, DNA repair protein RadC
MGQYVLRISDLPLQDRPRERLLSQGAKSLSHAELLAILLNTGQGPGKLSA
VGLAQLLLKTLEAQGDPLAQLRQVEAGELLQIEGIGPAKAATVLAAIELG
RRIFLARPPERTVIESPEQAAMALSGDLMWEPQEHFAVLHLDIKHRLIGQ
QIVTRGTATETLTHPRETFRSAIRQGASRILVAHNHPSGSLDPSPEDLAL
TRQLLQAGQLLQIPVLDHLILGGGQFLSLRQHTRLWEEFPQPE
>CYA_1195 rbcX, chaperon-like protein RbcX
MDLKQIAKDTAKTLISYLTYQAMRTVLAQLSETDPPRALWLQQFSARQNL
QEGETYLRALLAERPDLAYRIMTVREHIAAEVVDYLPEMAKTGIQQANME
HRRSHLERLTSAAGSPLATHPEAGSPLQNPTPETE
>CYA_1092 recA, recA protein
MKSEKRKALDQVLGQIERNFGKGAIMRLGDAAQMRVETIPSGAITLDLAM
GGGYPKGRIIEVFGPESSGKTSVALHAIAEVQKRGGTAAFVDAEHALDPA
YAAALGVDIQNLLISQPDTGEAALEIVDQLVRSAAVDIVVVDSVAALVPR
AEIEGDMGDAHVGLQARLMSQALRKIAGNVSKTGSIVLFLNQLRSKIGGI
GYGLQETTTGGNALKFYASVRLDIRRVQTLKKGAEEYGIRARVKVVKNKV
APPFRRAEFDIIFGQGISNIGCIVDLAEEMGILKRRGSWYSYKEENVAQG
RDNLVVYLKEKPEILAEVEAAVREKLSAGVTVSASRPGGIEEGEQEEVEA
PIFADEEF
>CYA_2022 recF, DNA replication and repair protein RecF
MYLRFLHLWHFRNYRDQKISFEAPKTILVGENAQGKTNLLEAVELLATLR
SRRAGRDRELVQQGAEKARIAATVERLGVAHELAMELRSQGGRSLRVNGQ
GLRRQSDFLGQVSAVVFSSLDLELVRGAPEARRTWLDGVLLQLEPAYLGL
VEQYRQILKQRNALLKQDPLAAGDKVPQMAFWDAQLATLGSRILRRRARL
LQRLEPLAARWHQAISGGRETLSLTYRPQVPLPDPQADPKVVQAQFLAAI
RAKAAAEQALGTSLVGPHRDEVELGIDGVAARAYGSQGQQRTLVLALKLA
ELELIEQVKGDPPLLLLDDVLAELDLHRQNQLLEAIQERVQTLVTTTHLG
SFDAAWLQGAQILQVHQGQIAPSPASLPLA
>CYA_2013 recG, ATP-dependent DNA helicase RecG
MFGQDPPAGWTLDGEERRRWKELGSRYRLYPQLELAERQHLVAETRRWLD
RLRRQQEQAQSGPPSPALPPPKGLSLEQPLQFLKGIGPKSAEKLAQLGLH
TVRDALYYFPRDHLDYSRRVLIRQAKVGETVTLVGTVKSCSCFTSPKNPL
LTILNLKIADKSGIVTLSRFYSGRQFAQRSWQAALERQYPKGAVVAASGL
VKKGRLGLTLDNPQLEVLGGEGEDPERLGKILPVYPLSEGIPADLVRKAV
QLALPAAALVEDPLPEPLKRQLQLLDLPLALQQIHFPKTQELLAQARRRL
VFDEFFYLQLSLLQRRQRYRAQAQAVPRYQPARGELLDRFYQILPFQLTA
GQQRAIDEILADLRDPLPMNRLLQGDVGSGKTVVAVAALLAAIQSGWQAA
LMAPTEVLAEQHYRKLVEWLSQLQVPVELLTGSTPPAKRREILRQLQTGE
LPLVVGTHALIQPAVQFRNLGLVVIDEQHRFGVEQRAALQQKGDHPDVLT
MTATPIPRTLTLALHGDLDVTQIDELPPGRKPVHTVVARPGDRLQVVRLM
EREIAQGRQAYVVLPLIEESEKLDLKSAIEEHQRLQEKVFPQFRVGLLHG
RLTSSEKEAVIEAFRRRELDILVSTTVVEVGVDVPNASVMLVEHAERFGL
SQLHQLRGRVGRGSDQAYCILMTGSQSEEALRRLKVLEQSHDGFFIAEMD
LRFRGPGEVMGTRQSGLPDFALASLMDDQEVLQLARQAAEQLIAQDPELQ
QWPRLRRILEERQARLLGPALLT
>CYA_1120 recJ-1, single-stranded-DNA-specific exonuclease RecJ
MEYRWDLLPTPPQFDPELSREYGKYAAKVLALRGLHSREQARAFVDPNQY
SPTPAGSLPDLERAVARLLQARKRGETLCIWGDFDCDGVTATSLLLSALQ
TLGFRVQFTLPLRSTEGHGLNPQRLQQVLDQGCQVLLTVDCGIGNAAEIA
LAQAQGMDVIVTDHHALPDPLPPAYAVVNPLRLPEEHPLRFLPGVGVAYK
LAEALYQALGIPGVEEYLDLVAVGIVADVAVLQRECRYLVQRGLPVLANT
QRPGLRALLDWVSNSQSSGTPTAQDIAFRLAPKLNAIGRWDDASLAVELL
TTSDPQRAQTLVEHFVALNEECRQLTQQVLQEASQQVESLDLARERAIVL
AGSGWNPGVLGIAAARLAEQYGCPTVLIAKDERTGRGYGSGRSIPGVNLV
EAIEAVRPLLLGGGGHPMAAGIQVDLSCLAAVQLALRRELAARVGPDRQA
RALAVEIVIDWERLASQGRDRVAELDEVYRQLQLLQPFGHGNPNPVVALM
NVRRGSVRLRASQNGRHLKFELGSRALWFWEAGEELERWQACQALDIALQ
LEAEQPWQGKVLAVRPSGDWQAPTVSAPSLRIQDYRQRPLPDSLQEVFRY
DGQALPLEQDFLPSAKTALLLARWPWLPANLAQLLQQVQPQTLILAASGH
HWKRLPHQIARLQELGRTGQWDPHVLAATTGLPWQWLAELEGPEQIPTRL
LGRIQESQAFHRWLDEASPTQIAQLCQRLLRPDPLPAVVSPK
>CYA_2826 recJ-2, single-stranded-DNA-specific exonuclease RecJ
MAGIPDQRWLFQPVNPLAAQSLAEAVGVSPVLAQILLNRGLSSPAAVQQY
LQPDPVHLPPPSQDFADLPLAVELLEGAIRRQEPIAICGDYDADGMTSTA
LLLRALRGAPVYYRIPSRLREGYGLNNRMVQELHREGVRLILTVDNGIAA
HAPIQLAKELGLTVIVTDHHDLPPQLPPADAILNPKQLPLSSPYRGMAGV
GVAYLLAQALAERRGDEHLERVALELFTVGTIADLAPLTGVNRLWVRQGL
ALLPTSQVAGIRALLAVMGMTGSPEELRPEWVGFGLGPRINAIGRIGRPE
LGIQLLTTDDPQQAEKLARRCERLNQVRQQMCGRIEAEALEQIARQGRDL
QQERVLTILGSPQQRWHKGVIGLVASRLAERFGCPVFIGSQSPQGEITGS
ARQGIPEFDVFQALEFCKDLFSKHGGHPAAGGFSLRAENWPLLEERLRQF
AQQRLQPEQIRPLVQIDAEVALADLTFDLYRELQRLQPCGIGNPEPVFCS
RNLQVLQQQRFCPQPAQRGEDTPGHLRLLLRDPVSRGLDGAGSSLAAPAK
ARSRPLWAIWWGGAAAYPLPAQIDIAYTLKAKRWGEETQLELEILGIRPA
AEASSADLSPAAVAPTLSDAKAGAQAAPSPLLIYRPAPQPTQPLRWQAVS
RFSALLPQARGTILLYGFRRPTFVLPPKQHPSLTLHYDRPQAGHRYNQLW
LWSWPPSLDHLKWLLSCTPGDALLIVLHHQAVPLPSAAALQRQLRHYLQN
QAQVDLLRLAQQWWLSPALLVAGLRSLGYACPEFGPTGSLEEELEAQRAW
YRSSWQQVAALLQGSRPQ
>CYA_2624 recN, DNA repair protein RecN
MLRLLRIENFALIEYLEIPFRAGLNVLTGETGAGKSIILDALDAALGGPA
RALRSGSDRGLVEAIFQPTAALEAWLEQEQIEPLEEGLVCSRELVMRNGK
LSSRLRVNGVLVNKAQMLSLRSQLVEITAQGQTSQLQSPQTQRRWLDAFG
GEKLLRLRSEVAACYQTWSQLKAEIASRQQNQHLRLQRLDLLELQAQELA
ALRLEDPDELTKLERERERLAHRVELQQQSYAAHQLLYQNDSGSPAIADL
LAQAERLLQSMAQRDPDLTPLVEMVSSALVQVEEAGRELLRYGETLEADP
SRLSKIERRLAQLRQACRKYGPTLAEVMAHAERLKAELAQLRDESTDLEE
LEARLDQAAQELERHCQMLSHLRQQVAHQLEKALVEELGPLGMSGVQFQV
QIQAGSPTAEGVDQVSFWFSPNPGEPLQPLADIASGGEMSRFLLALKAVF
SRVDPVATLVFDEIDVGVSGKVAQAIAAKLHQIARSHQVLCVTHQPLVAA
LADHHLRVYKVVQEGRTCVRVDSLREGERREELAQLAAGHSAQEAMGFVE
ALLKQAAQLRQLQLAGSA
>CYA_1394 recO, DNA repair protein RecO
MSGVTYRVTGINLKAMPLGEADRIITILTREQGLIRAVAKGSRKQLSKWG
GRMEPFVVNDLLVARGRWSAQTDPSQCLQRIAQAETLQSFPRLGRSLAHL
TAAQYLAEVALLLALPNQPQEELFVLLVEHLERIEQAPATEAVLPLLVHG
LYHLLVVGGVAPSVQACYSCGEELAGEAFFSPHAGGLVCDPCRLAQRLSP
VAWVSSSVLQALGSLPNPTLPSLAERALPLASWLAAERLLRRVLELHADR
AIRSAGLLASCYSVPVAETLPPTPSGQGSPVAAAAFSEEDSETLGSNLKK
L
>CYA_1368 recR, recombination protein RecR
MYTRPLARLIEELQRLPGIGSKTAQRLALHLLNRPAGEVEALAKALLEAK
QTVKHCSICFNWSAEDPCEICRSPQRDPSTWCVVADVKDLIAMERTREFK
GLYHVLGGLISPMNGIGAEQLRIRELVARVAREKPQELIFALSPSVEGEV
TMHVVKDYLKPVAPGLRMTRLAFGLPMGSELEYADEVTLARALEARQEF
>CYA_0798 rnhA, ribonuclease H
MAKSLRPGNRQVAPPPRLADCPPSGIFTDGGCSPNPGPGGWAVVVVEDDQ
IVDEFYGGDPASTNNRMELTGLIRALQYCRDTQSNSIDTIYSDSHLCVQT
YNDWMERWAAQGWRRRTGPVENLDLVQELYQLKQQCPQVRVAWIPAHRGL
RWNEYVDELVARARPK
>CYA_0822 rnhB, ribonuclease HII
MVGSGVGGVDKVVQPSLKWEGSLWQQGMRRVAGVDEVGRGALAGPVVAAA
VILPAHLDPEALSGVRDCKQLRPPQRAHWAERIAQVALAVGIGSASAAEI
DQLNIRQATLLAMQRALAQVGEVEHILLDGLPLAELGSRQTALVKGDQLS
LSIAAASIVAKVWRDTLMQSWDHQYPGYGWRTNVGYGTQEHRLALQRLGP
SPQHRRSFAPLRDLQAGEIGG
>CYA_0490 ruvA, Holliday junction DNA helicase RuvA
MIAFLSGHLVAIEWGERSSLTVEVQGIGYRVKAPARFLKQLPPIGEPVRV
FTHLVVRETELVLYGFGSPAERDVFVELIKVSGVGPALGLALLNTFGLPE
LVQAVVTENVRLLSLTPGVGHKTAQRLALELKTKLAHWRQGLENADRPLA
GGPPPAIREEVEMALLALGYSLQEIQAALQALPSQPRPTEEWLRDAITYL
SRQP
>CYA_1812 ruvB-1, Holliday junction DNA helicase RuvB
MAIISSRDTGQNAEGPKRRQQKSSAWRKEGRELSFAGERGADPSALLQPQ
AHPGEAQEESLRPRTLAEYIGQTELKEVLSIAIAAARARQEPLDHLLFYG
PPGLGKTTVAAVLAAEMGSQFYMTTAPALESPRDIAGYLVRLKRGDVLFI
DEIHRLPKVTEELLYPAMEDFRLDITIGKGRSARITSLPLERFTLIGATT
RIGALTSPLRDRFGHVQRLRFYEPHELVQIVLRTARLLNVSTDPEGAAEI
ARRSRGTPRIANRLFKRVRDYAQVRGDGHISQEVAAAALELFQVDPMGLD
WIDRKLLTVLVEQFGGGPVGLETMAAVTGEDPQTIEEVYEPYLLQIGYLQ
RTPRGRVVTPAALRHLGYEAQSPLPLWS
>CYA_1850 ruvB-2, Holliday junction DNA helicase RuvB
MAIISSRAAGAEDPGQRQQKSSARRRESKLAFARAEGLLQPQAHPSEAQE
ESLRPRTLAEYIGQTELKEVLSIAIAAARARGEPLDHLLFYGPPGLGKTT
VAAVLAAEMGSRFYMTTAPALESPRDIAGYLVRLKQGDVLFIDEIHRLPK
VTEELLYPAMEDFRLDITVGKGRSARITSIPLERFTLIGATTRIGALTSP
LRDRFGQVQRLRFYEPHELAEIVLRSARLLNTSIDRAGAEEIARRSRGTP
RIANRLLKRVRDYAQVRGDGHISREVAAAALELFQVDPMGLDWTDRKLLT
VLVEQFGGGPVGLETMAAVTGEDPQTIEEVYEPYLLQIGYLQRTPRGRVV
TPAALQHLGYTAQSPLPVWS
>CYA_1905 ruvC, crossover junction endodeoxyribonuclease RuvC
MPRRTPLPARRDPLPDRVSGTESSRATRTESSDPTPEQRILGLDPGLGTV
GFGCILAGAGGLRSLDYGVISTPGEQSIPERLQTLYEDLKELLRQFQPHQ
VGLEKLFFYKMGNTIPIAQARGVILLVLAQYHLVPVEFTPAQVKQSLTGY
GRADKQAVQAAVARELNLPSLPRPDDAADALAIAITLWHHRFA
>CYA_0561 topA, DNA topoisomerase I
MPKLVIVESPTKARTIRGFLPAGYEVQASMGHVRDLPESASDIPEEVKGE
EWSRLGVNVHANFEPLYVIPKDKRKVVKQLKEALKKADELILATDEDREG
ESISWHLQQVLQPKVPTRRMVFHEITREAIQEALQNCREVDEQLVRAQET
RRILDRLVGYTLSPLLWKKIAPKLSAGRVQSVAVKLLVDRERERRAFKKA
TYWDLKADLQPRTASQAASFPAELVSLGGKRLASGQDFDPSTGQLIAGRD
VVLLDQAQAEALRDRLLGKAWVVSSVEERPSTRKPAPPFTTSTLQQEANR
KLRLSAQQTMRIAQKLYEEGYITYMRTDSVHLSEQAIRAARACVESMYGK
EYLSPEPRQYTTKTKGAQEAHEAIRPAGSEFRLPSQTPLTGQELALYDLI
WKRTVASQMAEARQTHTIVLIAVDDAVFRASGKRIDFPGFFRAYVEGSDD
PEAALEDREVHLPLLRQGDPLSCLQLEPVGHETQPPPRYTEASLVKVLES
EGIGRPSTYATILNTIMSRGYVRSMGNALVPTYTAFAVTELLEKYFPNLV
NTRFTAEMEQTLDDIASGQADWLPYLRHFFLGEQGLEGQVKARELEIDSG
LARSIYLENLPVKIGIGPYGPYVSVETESGEVRANLPEDIPPADLSAEHI
EELIRRKQEGPKPIAFHPETQEPVYVIPQGPYGPYVQLGEVSEENKKPKR
TSLPRGLKPEQVTPEIALGLLSLPRTLGEHPESGKKVQAGIGRFGPYVVC
DGDFRSLPADEDVLTISLERALELLAQPKKGRGRGSAKPLRELGSHPEDG
EPVTLHDGPYGLYVKHGKVNASLPKDLSPEAVTLEMALELLAEKEGKGQA
KASRPAAAKRAKKAEAAPQKQQSHPTLLEAVSKARA
>CYA_0784 uvrA, excinuclease ABC, A subunit
MSGQNEIHVVGARQHNLKNLELRIPRNRLVVFTGVSGSGKSSLAFDTIFA
EGQRRYVESLSAYARQFLGQLDKPDVDRIEGLSPAIAIDQKSTSHNPRST
VGTVTEIYDYLRLLYGRAGIPHCPHCDRVIAPQTVDQMVDQILALPERTR
FQLLAPVVREKKGTHAALLQSLRQQGFVRVRIDGQVRDLSEEIELAKNKA
HTIEVVVDRLVKGPEIAERLADSLTTCLRQSGGLAVVELLPREEEREHLL
QKVAEVAGQYLNGKPTELIFSEQFACPEHGSVLGELSPRLFSFNSPIGAC
PVCHGLGFEPIFDPDRIVPDPKLPLYAAIAPWAERENPYYLALLAGVARA
LGFDLSSRWCDLTPEQQQILLYGTDQEIYVEAESPYRGRGYYRRYEGVIP
QLQRHYQETTSETYRQKLETYLTYRPCAACGGARLRPEALAVRVGGYRIT
DLTEVSIRECLHRLEHLKLTPRQAQIAELVLREIKTRLQFLIDVGLDYLT
LARPAMTLSGGEAQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNERLLQ
TLLRLRDLGNTLIVVEHDEETIRAADHIVDIGPSAGIHGGEVVAQGSLAD
ILACERSLTGAYLSGRRRIPTPARRRPGKAVSLKLTDAHKNNLKHIDVEI
PLGKLVCVTGVSGSGKSTLVNELLYPALRHYLGQKVPKPAEMGELQGVEH
IDKVIVIDQSPIGRTPRSNPATYTGLFDPIRQAFAQTLEAKARGYHAGHF
SFNVKGGRCEACKGQGVNVIEMNFLPDVYVTCEVCGGSRYSRETLQVRYK
GKNIAEVLDMTVGEALEFFAALPPAAKILQTLADVGLDYIKLGQPAPTLS
GGEAQRVKLAAELSRRSTGKTLYLLDEPSTGLSFYDVHKLLNVLQRLVDV
GNTVLVIEHNLDILRCADWIIDLGPEGGDQGGQIVAVGTPEAVAEQPGSH
TGRYLKQVLQRYPPGQ
>CYA_2564 uvrB, excinuclease ABC, B subunit
MSEFQLVSSYQPTGDQPKAIAGLVKSILEGHRFQTLLGATGTGKTFTIAH
TIQQVGRPTLVMAPNKTLAAQLCNELRELFPYNAVEYFISYYDYYQPEAY
VPSTDTYIAKSSSINDEIDMLRHSATRSLFERRDVIVVASVSCIYGLGMP
EEYLKASIPFQVGQEINQREVLRDLAGIQYERNDLELARGRFRVKGDVLE
IVPAYEDRVIRIEFFGDEIEAIRLIDPVTGEILTSLSALRVYPARHFVTP
EAQLQQAILNIEQELEEQLAFFRKQGKLLEAQRLEQRTRYDLEMLREVGY
CNGIENYSRHLTGRKEGEPPACLVDYFKANDWLLVVDESHVTVPQIRGMY
NGDRARKQVLVDHGFRLPSALDNRPLKAEEFWAKVHQCVFVSATPGNWEL
EQSGAQFETVVENGKTLKFYVPGTGRVIEQVIRPTGVVDPEVHVRPTAGQ
VEDLLGEIYLRLERSQQGLPERVIVTTLTKRMAEDLTEYLQERGIRVRYL
HSEISSIERIEILQDFREGAFDVLVGVNLLREGLDLPEVSLVAILDADKE
GFLRAERSLIQMIGRAARNVRGTVVMYADTLTGSMARAIAETQRRREIQL
QYNRQHNITPKPIIKKNSNAILSFLAISRKLNSQDLEKAFPVADEIPLSE
IPELIGQLELKMKAAAKNLEFEEAAQLRDQIKKLRQRLLGHHQST
>CYA_0207 uvrC, excinuclease ABC, C subunit
MTVPLIQNPEVLESRLKEIPAEPGVYLMRDATDQILYVGKSKKLRSRVRS
YFRFTGDLSPRIQRMVVQVCEIEFIVTDNESEALALEDNLIKTYQPPYNV
LLKEDKKYPYLCITWSEPYPQIYITRHRRLNQNQDKYYGPYTDVGLLRYT
LGLVKRIFPLRQRPKPLYKDRPCLNYDIGRCPGVCQGLISPEAYRKTVAQ
VAMIFQGQTDELIRELKEKMAQAAQQENYEAAARYRDQIRGLEQLGQSQK
VSLPNSTASRDAIALAMNDSRACIQLFQVRAGKLVGRLGFVAENRGDDPA
LILQRVLQEHYQYCDPVEIPSEILTQYELPDRDFLESWLSQKKGRKVSLL
APQRQSKAELIELVERNAQLELARSQRLAEREAAALERLAEVLDLPEPPR
RLEAYDISHIQGSDAVGSQVVFIDGLPAKQHYRRYKIRNPQVRPGHSDDF
ASHAEVARRRFSKMTSEDQPDLVLIDGGKGQLAAVMAVLAELGLDHLPVF
ALAKREEEIFRPGDPEPLRLPPQDPARLLLQRLRDEAHRFALAYHRQQRK
LRQQASVLEEIPGLGKQRQKLLMEAFRSLARIQVATEEQLAQVPGIGPKL
ARQIYRYFHPEAETELPATAE
>CYA_1976 xseA, exodeoxyribonuclease VII, large subunit
MLFSKFRTRGLPLLSVGGVSGYLKSLLAGDPYLARLWVVGEVSSCQRSRN
GHLFLTLVDPESGDLLKGVVWQSQTARLSFWPEVGQRVLALGQLGIYSGG
SYYRLVIWQLLPAGEGLLAWRFQQLKARLAAEGLFDNQRPLPTHPQCIAV
VSSPDAAGWGDIRRTLNQRYPGLRVLFAPAQVQGEAAPESIVRAIRRVER
DGRAEVLIVARGGGSGEDLACFNDERVVRAIAECSIPVVTGIGHQRDETL
ADYAADYAAHTPTAAAERVVPDLRELQRQAFQLRQQLVERTLHALEKAEQ
RWHHAQRRLAQVHPERLLQQAQERLAQQQQRLVQAVRHRLQQQQQRHQAL
QQHLQALDPAAVLRRGYALVRDERGSLVRSHRLPPQTRLRIQLASGSLWA
RVEESHEPPQT
>CYA_1975 xseB, exodeoxyribonuclease VII, small subunit
MSRRKREDPWRYEAAIAEVESLIAQIESGELDLAEVVERFQQAAQTLKRC
AEFLEEKRQQVEILIEELNQDDEDWQAF
>CYA_0466 xth, exodeoxyribonuclease III
MQVATWNVNSIRTRLPQVLAWLDKQGSLDVLCLQETKVVDAEFPRAPFEE
RGFHVEVYGQKAYNGVALISREVPEKVERGFAALLPAAAELDEQKRLIGG
LYRGIRILNLYVPNGEAVGSDKYAYKLRWLACLKDYLQVALDQGQPILLC
GDFNIAPEDRDIYDPGKAGEIMASEPERQALQKILALGFEDAFRKFNPDP
GHFSWWDYRGGGFQKNRGWRIDHLYLSPLLQDKATACWIDVEPRRAEKPS
DHAPVVVELAV