Gene list
Applied filters:
COG category: Replication, recombination and repair
Organism: Synechococcus sp. JA-3-3Ab, JA-3-3Ab
Number of genes found: 229
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| Synechococcus sp. JA-3-3Ab, JA-3-3Ab | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | CYA_1126 | ISSoc4, transposase orfA | SubName: Full=ISSoc4, transposase orfA; | chromosome | CDS | 1152554 | 399 | + | 0.468672 |
| NA | CYA_2418 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2429181 | 648 | - | 0.58642 |
| NA | CYA_2581 | ISSoc3, orfB transposase | SubName: Full=ISSoc3, orfB transposase; | chromosome | CDS | 2604688 | 1272 | + | 0.586478 |
| NA | CYA_0012 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 13486 | 735 | - | 0.45034 |
| NA | CYA_2876 | putative single-strand binding protein | RecName: Full=Single-stranded DNA-binding protein; | chromosome | CDS | 2893038 | 399 | + | 0.62406 |
| NA | CYA_0596 | ISSoc2, transposase | SubName: Full=ISSoc2, transposase; | chromosome | CDS | 607044 | 1218 | + | 0.552545 |
| NA | CYA_0981 | ISSoc1, transposase | SubName: Full=ISSoc1, transposase; | chromosome | CDS | 994257 | 1212 | - | 0.55033 |
| NA | CYA_0126 | putative nuclease SbcCD, D subunit | SubName: Full=Putative nuclease SbcCD, D subunit; | chromosome | CDS | 117811 | 1305 | + | 0.613027 |
| NA | CYA_1374 | ISSoc2, resolvase | SubName: Full=ISSoc2, resolvase; | chromosome | CDS | 1384977 | 618 | + | 0.529126 |
| NA | CYA_1375 | ISSoc2, transposase | SubName: Full=ISSoc2, transposase; | chromosome | CDS | 1385449 | 1281 | + | 0.556596 |
| NA | CYA_2710 | ISSoc4, transposase orfB | SubName: Full=ISSoc4, transposase orfB; | chromosome | CDS | 2728910 | 567 | + | 0.453263 |
| NA | CYA_0727 | ISSoc2, resolvase | SubName: Full=ISSoc2, resolvase; | chromosome | CDS | 732514 | 594 | - | 0.521886 |
| NA | CYA_2859 | serine/threonine protein kinase | SubName: Full=Serine/threonine protein kinase; EC=2.7.1.-; | chromosome | CDS | 2874783 | 1593 | - | 0.632141 |
| NA | CYA_0846 | base excision DNA repair protein, HhH-GPD family | RecName: Full=Endonuclease III; EC=4.2.99.18; | chromosome | CDS | 855551 | 669 | - | 0.630792 |
| NA | CYA_0998 | ISSoc4, transposase orfB | SubName: Full=ISSoc4, transposase orfB; | chromosome | CDS | 1012515 | 567 | - | 0.455026 |
| NA | CYA_2249 | ISSoc2, transposase | SubName: Full=ISSoc2, transposase; | chromosome | CDS | 2258727 | 1281 | - | 0.557377 |
| NA | CYA_2587 | ISSoc3, orfA transposase | SubName: Full=ISSoc3, orfA transposase; | chromosome | CDS | 2610755 | 477 | + | 0.515723 |
| NA | CYA_0767 | ISSoc1, transposase | SubName: Full=ISSoc1, transposase; | chromosome | CDS | 774780 | 1194 | - | 0.553601 |
| NA | CYA_1661 | ISSoc4, transposase orfA | SubName: Full=ISSoc4, transposase orfA; | chromosome | CDS | 1663936 | 399 | + | 0.461153 |
| NA | CYA_2519 | RecF/RecN/SMC N terminal domain protein | SubName: Full=RecF/RecN/SMC N terminal domain protein; | chromosome | CDS | 2531669 | 3597 | - | 0.549903 |
| NA | CYA_0301 | DNA-3-methyladenine glycosylase | RecName: Full=Putative 3-methyladenine DNA glycosylase; EC=3.2.2.-; | chromosome | CDS | 306404 | 588 | + | 0.647959 |
| NA | CYA_2046 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2065899 | 294 | - | 0.527211 |
| NA | CYA_1440 | ISSoc14, transposase, truncation | SubName: Full=ISSoc14, transposase, truncation; | chromosome | CDS | 1446917 | 459 | - | 0.540305 |
| NA | CYA_1645 | ISSoc2, resolvase | SubName: Full=ISSoc2, resolvase; | chromosome | CDS | 1644320 | 618 | + | 0.529126 |
| NA | CYA_1472 | ISSoc2, resolvase | SubName: Full=ISSoc2, resolvase; | chromosome | CDS | 1479754 | 618 | - | 0.533981 |
| NA | CYA_2638 | ISSoc3, orfA transposase, interruption-N | SubName: Full=ISSoc3, orfA transposase, interruption-N; | chromosome | CDS | 2653525 | 231 | + | 0.497835 |
| NA | CYA_2709 | ISSoc4, transposase orfA | SubName: Full=ISSoc4, transposase orfA; | chromosome | CDS | 2728530 | 399 | + | 0.463659 |
| NA | CYA_1940 | thermonuclease | SubName: Full=Thermonuclease; EC=3.1.31.1; | chromosome | CDS | 1951110 | 525 | - | 0.611429 |
| NA | CYA_1291 | ISSoc4, transposase orfA | SubName: Full=ISSoc4, transposase orfA; | chromosome | CDS | 1300763 | 399 | - | 0.461153 |
| NA | CYA_2580 | ISSoc3, orfA transposase | SubName: Full=ISSoc3, orfA transposase; | chromosome | CDS | 2604256 | 477 | - | 0.515723 |
| NA | CYA_2034 | putative transposase | SubName: Full=Putative transposase; | chromosome | CDS | 2051443 | 1281 | - | 0.52381 |
| NA | CYA_0373 | serine/threonine protein kinase | SubName: Full=Serine/threonine protein kinase; EC=2.7.1.-; | chromosome | CDS | 388505 | 1953 | - | 0.626216 |
| NA | CYA_1662 | ISSoc4, transposase orfB | SubName: Full=ISSoc4, transposase orfB; | chromosome | CDS | 1664316 | 567 | + | 0.45679 |
| NA | CYA_1913 | ISSoc3, orfA transposase | SubName: Full=ISSoc3, orfA transposase; | chromosome | CDS | 1922540 | 477 | - | 0.515723 |
| NA | CYA_1890 | ISSoc2, transposase | SubName: Full=ISSoc2, transposase; | chromosome | CDS | 1897469 | 1281 | - | 0.558938 |
| NA | CYA_0807 | ISSoc2, transposase | SubName: Full=ISSoc2, transposase; | chromosome | CDS | 818226 | 1218 | - | 0.555008 |
| NA | CYA_0412 | putative uracil-DNA glycosylase, family 4 | SubName: Full=Putative uracil-DNA glycosylase, family 4; | chromosome | CDS | 433786 | 519 | + | 0.649326 |
| NA | CYA_0853 | site-specific recombinase, phage integrase family | SubName: Full=Site-specific recombinase, phage integrase family; | chromosome | CDS | 862122 | 930 | + | 0.64086 |
| NA | CYA_1604 | ISSoc4, transposase orfAB | SubName: Full=ISSoc4, transposase orfAB; | chromosome | CDS | 1612112 | 948 | + | 0.456751 |
| NA | CYA_0808 | ISSoc2, resolvase | SubName: Full=ISSoc2, resolvase; | chromosome | CDS | 819298 | 594 | - | 0.523569 |
| NA | CYA_2695 | ISSoc2, transposase | SubName: Full=ISSoc2, transposase; | chromosome | CDS | 2710018 | 1266 | + | 0.560032 |
| NA | CYA_2063 | ISSoc3, orfB transposase | SubName: Full=ISSoc3, orfB transposase; | chromosome | CDS | 2083980 | 1272 | - | 0.584119 |
| NA | CYA_1181 | ISSoc7, transposase | SubName: Full=ISSoc7, transposase; | chromosome | CDS | 1196824 | 1206 | + | 0.548093 |
| NA | CYA_2002 | ISSoc2, resolvase | SubName: Full=ISSoc2, resolvase; | chromosome | CDS | 2018988 | 618 | - | 0.535599 |
| NA | CYA_1572 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1583158 | 339 | + | 0.572271 |
| NA | CYA_1801 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1802690 | 1125 | + | 0.432 |
| NA | CYA_2343 | ISSoc1, transposase, truncation | SubName: Full=ISSoc1, transposase, truncation; | chromosome | CDS | 2350437 | 426 | - | 0.619718 |
| NA | CYA_0322 | putative helicase | SubName: Full=Putative helicase; | chromosome | CDS | 338498 | 2895 | - | 0.633851 |
| NA | CYA_1585 | ISSoc1, transposase | SubName: Full=ISSoc1, transposase; | chromosome | CDS | 1594890 | 1218 | + | 0.564039 |
| NA | CYA_2440 | ISSoc2, transposase | SubName: Full=ISSoc2, transposase; | chromosome | CDS | 2450641 | 1281 | + | 0.557377 |
| NA | CYA_1358 | ISSoc4, transposase orfA | SubName: Full=ISSoc4, transposase orfA; | chromosome | CDS | 1367795 | 399 | + | 0.463659 |
| NA | CYA_1938 | ISSoc2, transposase | SubName: Full=ISSoc2, transposase; | chromosome | CDS | 1949094 | 1281 | + | 0.556596 |
| NA | CYA_0999 | ISSoc4, transposase orfA | SubName: Full=ISSoc4, transposase orfA; | chromosome | CDS | 1013063 | 399 | - | 0.468672 |
| NA | CYA_0091 | ISSoc1, transposase | SubName: Full=ISSoc1, transposase; | chromosome | CDS | 88306 | 1182 | - | 0.591371 |
| NA | CYA_1311 | ISSoc4, transposase orfAB | SubName: Full=ISSoc4, transposase orfAB; | chromosome | CDS | 1321050 | 933 | + | 0.458735 |
| NA | CYA_1471 | ISSoc2, transposase | SubName: Full=ISSoc2, transposase; | chromosome | CDS | 1478619 | 1281 | - | 0.557377 |
| NA | CYA_1860 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1865040 | 804 | - | 0.645522 |
| NA | CYA_2846 | ISSoc4, transposase orfB | SubName: Full=ISSoc4, transposase orfB; | chromosome | CDS | 2863004 | 510 | + | 0.452941 |
| NA | CYA_1642 | putative transposase, truncation | SubName: Full=Putative transposase, truncation; | chromosome | CDS | 1642886 | 243 | - | 0.559671 |
| NA | CYA_2520 | Ser/Thr protein phosphatase family protein | SubName: Full=Ser/Thr protein phosphatase family protein; | chromosome | CDS | 2535268 | 1269 | - | 0.610717 |
| NA | CYA_2424 | ISSoc2, transposase | SubName: Full=ISSoc2, transposase; | chromosome | CDS | 2433346 | 1281 | - | 0.555035 |
| NA | CYA_1137 | ISSoc3, orfA transposase | SubName: Full=ISSoc3, orfA transposase; | chromosome | CDS | 1161246 | 477 | + | 0.519916 |
| NA | CYA_0777 | ISSoc5, transposase | SubName: Full=ISSoc5, transposase; | chromosome | CDS | 782541 | 1230 | - | 0.554472 |
| NA | CYA_1236 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1247523 | 417 | + | 0.642686 |
| NA | CYA_1977 | ISSoc7, transposase | SubName: Full=ISSoc7, transposase; | chromosome | CDS | 1995330 | 1230 | + | 0.548781 |
| NA | CYA_0226 | ISSoc7, transposase | SubName: Full=ISSoc7, transposase; | chromosome | CDS | 229317 | 1206 | - | 0.548093 |
| NA | CYA_2221 | ISSoc3, orfA transposase | SubName: Full=ISSoc3, orfA transposase; | chromosome | CDS | 2237234 | 477 | + | 0.515723 |
| NA | CYA_1882 | serine/threonine protein kinase | SubName: Full=Serine/threonine protein kinase; EC=2.7.11.1; | chromosome | CDS | 1888007 | 1674 | + | 0.644564 |
| NA | CYA_2005 | staphylococcal nuclease domain protein | SubName: Full=Staphylococcal nuclease domain protein; | chromosome | CDS | 2022286 | 978 | + | 0.605317 |
| NA | CYA_2616 | putative DNA mismatch repair protein MutL | SubName: Full=Putative DNA mismatch repair protein MutL; | chromosome | CDS | 2632185 | 1752 | + | 0.645548 |
| NA | CYA_2012 | putative transposase, truncation | SubName: Full=Putative transposase, truncation; | chromosome | CDS | 2027934 | 543 | + | 0.530387 |
| NA | CYA_1263 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1279028 | 507 | + | 0.595661 |
| NA | CYA_2721 | ISSoc3, orfA transposase, interruption-N | SubName: Full=ISSoc3, orfA transposase, interruption-N; | chromosome | CDS | 2739836 | 174 | + | 0.477012 |
| NA | CYA_1959 | ISSoc3, orfB transposase | SubName: Full=ISSoc3, orfB transposase; | chromosome | CDS | 1969262 | 1272 | + | 0.583333 |
| NA | CYA_2439 | ISSoc2, resolvase | SubName: Full=ISSoc2, resolvase; | chromosome | CDS | 2450193 | 594 | + | 0.515152 |
| NA | CYA_1891 | ISSoc2, resolvase | SubName: Full=ISSoc2, resolvase; | chromosome | CDS | 1898604 | 594 | - | 0.521886 |
| NA | CYA_0156 | ISSoc3, orfA transposase | SubName: Full=ISSoc3, orfA transposase; | chromosome | CDS | 152388 | 474 | - | 0.521097 |
| NA | CYA_1937 | ISSoc2, resolvase | SubName: Full=ISSoc2, resolvase; | chromosome | CDS | 1948622 | 618 | + | 0.532362 |
| NA | CYA_2393 | ISSoc2, transposase | SubName: Full=ISSoc2, transposase; | chromosome | CDS | 2403316 | 1281 | + | 0.559719 |
| NA | CYA_2163 | hydrolase, NUDIX family | SubName: Full=Hydrolase, NUDIX family; | chromosome | CDS | 2175829 | 480 | - | 0.620833 |
| NA | CYA_2069 | conserved hypothetical protein | RecName: Full=NAD(P)H-quinone oxidoreductase subunit M; EC=1.6.5.-; AltName: Full=NAD(P)H dehydrogenase I subunit M; Short=NDH-1 subunit M; Short=NDH-M; | chromosome | CDS | 2088582 | 366 | + | 0.560109 |
| NA | CYA_2582 | MutS2 family protein | RecName: Full=Endonuclease MutS2; EC=3.1.-.-; | chromosome | CDS | 2606279 | 2400 | + | 0.654167 |
| NA | CYA_0038 | ISSoc4, transposase orfB | SubName: Full=ISSoc4, transposase orfB; | chromosome | CDS | 34937 | 552 | + | 0.46558 |
| NA | CYA_0739 | ISSoc8, transposase, interruption-C | SubName: Full=ISSoc8, transposase, interruption-C; | chromosome | CDS | 744741 | 363 | + | 0.550964 |
| NA | CYA_0452 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 470548 | 411 | - | 0.562044 |
| NA | CYA_2381 | site-specific recombinase, resolvase family | SubName: Full=Site-specific recombinase, resolvase family; | chromosome | CDS | 2389808 | 1287 | + | 0.639472 |
| NA | CYA_2653 | ATP-dependent helicase, DEAD/DEAH box family | SubName: Full=ATP-dependent helicase, DEAD/DEAH box family; | chromosome | CDS | 2668683 | 2412 | - | 0.608209 |
| NA | CYA_0158 | ISSoc3, orfB transposase | SubName: Full=ISSoc3, orfB transposase; | chromosome | CDS | 152817 | 1272 | + | 0.585692 |
| NA | CYA_0037 | ISSoc4, transposase orfA | SubName: Full=ISSoc4, transposase orfA; | chromosome | CDS | 34557 | 399 | + | 0.466165 |
| NA | CYA_2845 | ISSoc4, transposase orfA | SubName: Full=ISSoc4, transposase orfA; | chromosome | CDS | 2862567 | 399 | + | 0.463659 |
| NA | CYA_0933 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 943317 | 1074 | + | 0.539106 |
| NA | CYA_1127 | ISSoc4, transposase orfB | SubName: Full=ISSoc4, transposase orfB; | chromosome | CDS | 1152934 | 567 | + | 0.455026 |
| NA | CYA_1136 | ISSoc3, orfB transposase | SubName: Full=ISSoc3, orfB transposase; | chromosome | CDS | 1160019 | 1272 | - | 0.582547 |
| NA | CYA_1958 | ISSoc3, orfA transposase | SubName: Full=ISSoc3, orfA transposase; | chromosome | CDS | 1968830 | 477 | - | 0.513627 |
| NA | CYA_0687 | ISSoc1, transposase | SubName: Full=ISSoc1, transposase; | chromosome | CDS | 693323 | 1212 | + | 0.559406 |
| NA | CYA_2684 | ISSoc2, resolvase | SubName: Full=ISSoc2, resolvase; | chromosome | CDS | 2698806 | 618 | + | 0.538835 |
| NA | CYA_2628 | putative ATP-dependent DNA helicase RecQ | SubName: Full=Putative ATP-dependent DNA helicase RecQ; | chromosome | CDS | 2645144 | 1416 | + | 0.663136 |
| NA | CYA_2158 | ISSoc1, transposase | SubName: Full=ISSoc1, transposase; | chromosome | CDS | 2170715 | 1194 | + | 0.552764 |
| NA | CYA_0701 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 707669 | 507 | + | 0.579882 |
| NA | CYA_1438 | ISSoc2, transposase | SubName: Full=ISSoc2, transposase; | chromosome | CDS | 1445169 | 1233 | - | 0.555556 |
| NA | CYA_0708 | conserved hypothetical protein TIGR00252 | RecName: Full=UPF0102 protein CYA_0708; | chromosome | CDS | 714927 | 396 | + | 0.583333 |
| NA | CYA_2010 | ISSoc4, transposase orfA | SubName: Full=ISSoc4, transposase orfA; | chromosome | CDS | 2026943 | 405 | + | 0.464198 |
| NA | CYA_2756 | protein kinase | SubName: Full=Protein kinase; EC=2.7.1.-; | chromosome | CDS | 2778001 | 1584 | + | 0.63005 |
| NA | CYA_0053 | ISSoc4, transposase orfAB | SubName: Full=ISSoc4, transposase orfAB; | chromosome | CDS | 51700 | 948 | - | 0.456751 |
| NA | CYA_2694 | ISSoc2, resolvase | SubName: Full=ISSoc2, resolvase; | chromosome | CDS | 2709546 | 618 | + | 0.535599 |
| NA | CYA_0690 | ISSoc1, transposase | SubName: Full=ISSoc1, transposase; | chromosome | CDS | 698056 | 1149 | - | 0.562228 |
| NA | CYA_0887 | ISSoc1, transposase | SubName: Full=ISSoc1, transposase; | chromosome | CDS | 893440 | 1194 | + | 0.567002 |
| NA | CYA_1293 | putative type III restriction-modification system, Res subunit | SubName: Full=Putative type III restriction-modification system, Res subunit; | chromosome | CDS | 1301518 | 2814 | + | 0.598081 |
| NA | CYA_0680 | conserved hypothetical protein TIGR00252 | RecName: Full=UPF0102 protein CYA_0680; | chromosome | CDS | 687319 | 402 | + | 0.594527 |
| NA | CYA_2262 | protein kinase | SubName: Full=Protein kinase; | chromosome | CDS | 2269929 | 2166 | - | 0.609418 |
| NA | CYA_0549 | ISSoc3, orfA transposase | SubName: Full=ISSoc3, orfA transposase; | chromosome | CDS | 563304 | 477 | - | 0.519916 |
| NA | CYA_0068 | ISSoc3, orfA transposase | SubName: Full=ISSoc3, orfA transposase; | chromosome | CDS | 65283 | 477 | + | 0.51782 |
| NA | CYA_0620 | ISSoc1, transposase | SubName: Full=ISSoc1, transposase; | chromosome | CDS | 629981 | 1194 | - | 0.558626 |
| NA | CYA_2146 | serine/threonine protein kinase | SubName: Full=Serine/threonine protein kinase; EC=2.7.11.1; | chromosome | CDS | 2158113 | 1932 | + | 0.645963 |
| NA | CYA_2271 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2279868 | 633 | - | 0.63981 |
| NA | CYA_2572 | ISSoc2, resolvase | SubName: Full=ISSoc2, resolvase; | chromosome | CDS | 2598424 | 618 | + | 0.522654 |
| NA | CYA_0436 | ISSoc6, orfB transposase | SubName: Full=ISSoc6, orfB transposase; | chromosome | CDS | 455921 | 1251 | - | 0.476419 |
| NA | CYA_0876 | CRISPR-associated RAMP protein | SubName: Full=CRISPR-associated RAMP protein; | chromosome | CDS | 880648 | 975 | - | 0.613333 |
| NA | CYA_2685 | ISSoc2, transposase | SubName: Full=ISSoc2, transposase; | chromosome | CDS | 2699278 | 1281 | + | 0.552693 |
| NA | CYA_2780 | hydrolase, TatD family | SubName: Full=Hydrolase, TatD family; | chromosome | CDS | 2799667 | 786 | - | 0.64631 |
| NA | CYA_1279 | ISSoc4, transposase orfAB | SubName: Full=ISSoc4, transposase orfAB; | chromosome | CDS | 1290363 | 948 | - | 0.456751 |
| NA | CYA_1060 | putative methylated-DNA-[protein]-cysteine S-methyltransferase | SubName: Full=Putative methylated-DNA-[protein]-cysteine S-methyltransferase; | chromosome | CDS | 1077377 | 333 | - | 0.612613 |
| NA | CYA_0042 | WD domain, G-beta repeat protein | SubName: Full=WD domain, G-beta repeat protein; | chromosome | CDS | 39584 | 2109 | + | 0.63964 |
| NA | CYA_2081 | ISSoc4, transposase orfB | SubName: Full=ISSoc4, transposase orfB; | chromosome | CDS | 2101216 | 552 | - | 0.45471 |
| NA | CYA_1886 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1891482 | 4089 | - | 0.526779 |
| NA | CYA_1439 | ISSoc2, resolvase | SubName: Full=ISSoc2, resolvase; | chromosome | CDS | 1446256 | 594 | - | 0.530303 |
| NA | CYA_0707 | conserved hypothetical protein TIGR00250 | RecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; | chromosome | CDS | 715289 | 480 | - | 0.660417 |
| NA | CYA_1502 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1510605 | 348 | - | 0.531609 |
| NA | CYA_0721 | exonuclease, SbcC family | SubName: Full=Exonuclease, SbcC family; | chromosome | CDS | 723925 | 3291 | + | 0.64175 |
| NA | CYA_2415 | ISSoc3, orfA transposase | SubName: Full=ISSoc3, orfA transposase; | chromosome | CDS | 2426212 | 477 | - | 0.51782 |
| NA | CYA_1128 | ISSoc3, orfA transposase | SubName: Full=ISSoc3, orfA transposase; | chromosome | CDS | 1153631 | 477 | - | 0.524109 |
| NA | CYA_2425 | ISSoc2, resolvase | SubName: Full=ISSoc2, resolvase; | chromosome | CDS | 2434481 | 594 | - | 0.518519 |
| NA | CYA_2250 | ISSoc2, resolvase | SubName: Full=ISSoc2, resolvase; | chromosome | CDS | 2259862 | 618 | - | 0.535599 |
| NA | CYA_0008 | type II DNA topoisomerase, A subunit | SubName: Full=Type II DNA topoisomerase, A subunit; | chromosome | CDS | 7057 | 2550 | - | 0.648235 |
| NA | CYA_2001 | ISSoc2, transposase | SubName: Full=ISSoc2, transposase; | chromosome | CDS | 2017853 | 1281 | - | 0.555035 |
| NA | CYA_2573 | ISSoc2, transposase | SubName: Full=ISSoc2, transposase; | chromosome | CDS | 2598896 | 1281 | + | 0.559719 |
| NA | CYA_1646 | ISSoc2, transposase | SubName: Full=ISSoc2, transposase; | chromosome | CDS | 1644792 | 1281 | + | 0.555816 |
| NA | CYA_2064 | ISSoc3, orfA transposase | SubName: Full=ISSoc3, orfA transposase; | chromosome | CDS | 2085207 | 477 | + | 0.513627 |
| NA | CYA_2637 | ISSoc4, transposase orfB | SubName: Full=ISSoc4, transposase orfB; | chromosome | CDS | 2653693 | 567 | - | 0.455026 |
| NA | CYA_2333 | protein kinase domain/TPR repeat protein | SubName: Full=Protein kinase domain/TPR repeat protein; | chromosome | CDS | 2337765 | 2859 | - | 0.637636 |
| NA | CYA_1772 | ISSoc2, resolvase | SubName: Full=ISSoc2, resolvase; | chromosome | CDS | 1778902 | 594 | + | 0.516835 |
| NA | CYA_0877 | CRISPR-associated RAMP protein, SSO1426 family | SubName: Full=CRISPR-associated RAMP protein, SSO1426 family; | chromosome | CDS | 881677 | 843 | - | 0.635824 |
| NA | CYA_1360 | ISSoc4, transposase orfB | SubName: Full=ISSoc4, transposase orfB; | chromosome | CDS | 1368175 | 567 | + | 0.45679 |
| NA | CYA_1773 | ISSoc2, transposase | SubName: Full=ISSoc2, transposase; | chromosome | CDS | 1779350 | 1281 | + | 0.557377 |
| NA | CYA_0345 | ISSoc2, transposase | SubName: Full=ISSoc2, transposase; | chromosome | CDS | 362789 | 1281 | - | 0.556596 |
| NA | CYA_0397 | ISSoc2, resolvase | SubName: Full=ISSoc2, resolvase; | chromosome | CDS | 411428 | 594 | - | 0.521886 |
| NA | CYA_0726 | ISSoc2, transposase | SubName: Full=ISSoc2, transposase; | chromosome | CDS | 731379 | 1281 | - | 0.555035 |
| NA | CYA_2392 | ISSoc2, resolvase | SubName: Full=ISSoc2, resolvase; | chromosome | CDS | 2402868 | 594 | + | 0.518519 |
| NA | CYA_1179 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1193692 | 1953 | + | 0.637993 |
| NA | CYA_2636 | ISSoc3, orfB transposase | SubName: Full=ISSoc3, orfB transposase; | chromosome | CDS | 2652298 | 1272 | - | 0.584119 |
| NA | CYA_0595 | ISSoc2, resolvase | SubName: Full=ISSoc2, resolvase; | chromosome | CDS | 606572 | 618 | + | 0.532362 |
| NA | CYA_2389 | putative single-strand binding protein | RecName: Full=Single-stranded DNA-binding protein; | chromosome | CDS | 2399908 | 357 | - | 0.605042 |
| NA | CYA_0704 | ISSoc1, transposase | SubName: Full=ISSoc1, transposase; | chromosome | CDS | 712445 | 1194 | - | 0.553601 |
| NA | CYA_0395 | ISSoc2, transposase | SubName: Full=ISSoc2, transposase; | chromosome | CDS | 410293 | 1281 | - | 0.556596 |
| NA | CYA_1956 | ISSoc5, transposase | SubName: Full=ISSoc5, transposase; | chromosome | CDS | 1966855 | 1227 | + | 0.560717 |
| NA | CYA_0349 | UvrD/REP helicase domain protein | SubName: Full=UvrD/REP helicase domain protein; | chromosome | CDS | 366346 | 2121 | + | 0.639321 |
| NA | CYA_2355 | ISSoc3, orfA transposase | SubName: Full=ISSoc3, orfA transposase; | chromosome | CDS | 2362620 | 477 | + | 0.51782 |
| NA | CYA_2135 | hydrolase, NUDIX family | SubName: Full=Hydrolase, NUDIX family; | chromosome | CDS | 2148726 | 576 | - | 0.602431 |
| NA | CYA_0881 | CRISPR-associated RAMP protein | SubName: Full=CRISPR-associated RAMP protein; | chromosome | CDS | 884334 | 714 | - | 0.672269 |
| NA | CYA_1289 | ISSoc4, transposase orfB | SubName: Full=ISSoc4, transposase orfB; | chromosome | CDS | 1300215 | 567 | - | 0.45679 |
| NA | CYA_2082 | ISSoc4, transposase orfA | SubName: Full=ISSoc4, transposase orfA; | chromosome | CDS | 2101749 | 399 | - | 0.466165 |
| NA | CYA_1145 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1169041 | 1539 | + | 0.637427 |
| NA | CYA_2722 | ISSoc4, transposase orfA | SubName: Full=ISSoc4, transposase orfA; | chromosome | CDS | 2740043 | 405 | + | 0.464198 |
| NA | CYA_0874 | putative CRISPR-associated RAMP protein | SubName: Full=Putative CRISPR-associated RAMP protein; | chromosome | CDS | 879144 | 1053 | - | 0.613485 |
| NA | CYA_0209 | serine/threonine protein kinase | SubName: Full=Serine/threonine protein kinase; EC=2.7.1.-; | chromosome | CDS | 216419 | 1845 | - | 0.660705 |
| NA | CYA_2724 | ISSoc3, orfA transposase, interruption-C | SubName: Full=ISSoc3, orfA transposase, interruption-C; | chromosome | CDS | 2741015 | 315 | + | 0.526984 |
| NA | CYA_0956 | D12 class N6 adenine-specific DNA methyltransferase | SubName: Full=D12 class N6 adenine-specific DNA methyltransferase; | chromosome | CDS | 969244 | 951 | - | 0.471083 |
| NA | CYA_2640 | ISSoc3, orfA transposase, interruption-C | SubName: Full=ISSoc3, orfA transposase, interruption-C; | chromosome | CDS | 2654705 | 315 | + | 0.51746 |
| NA | CYA_2649 | putative methyltransferase | SubName: Full=Putative methyltransferase; | chromosome | CDS | 2665895 | 552 | - | 0.664855 |
| NA | CYA_2253 | uracil-DNA glycosylase, family 4 | SubName: Full=Uracil-DNA glycosylase, family 4; EC=3.2.2.-; | chromosome | CDS | 2262759 | 621 | + | 0.624799 |
| NA | CYA_2639 | ISSoc4, transposase orfA | SubName: Full=ISSoc4, transposase orfA; | chromosome | CDS | 2654241 | 399 | - | 0.463659 |
| NA | CYA_1359 | ISSoc5, transposase, truncation | SubName: Full=ISSoc5, transposase, truncation; | chromosome | CDS | 1368726 | 570 | - | 0.538597 |
| NA | CYA_0346 | ISSoc2, resolvase | SubName: Full=ISSoc2, resolvase; | chromosome | CDS | 363924 | 618 | - | 0.532362 |
| NA | CYA_0737 | ISSoc8, transposase, interruption-N | SubName: Full=ISSoc8, transposase, interruption-N; | chromosome | CDS | 743274 | 717 | + | 0.552301 |
| NA | CYA_0437 | ISSoc6, orfA transposase | SubName: Full=ISSoc6, orfA transposase; | chromosome | CDS | 457222 | 405 | + | 0.454321 |
| cas1-1 | CYA_0729 | CRISPR-associated protein Cas1 | RecName: Full=CRISPR-associated endonuclease Cas1; EC=3.1.-.-; | chromosome | CDS | 734001 | 948 | - | 0.50211 |
| cas2-1 | CYA_0135 | CRISPR-associated protein Cas2 | RecName: Full=CRISPR-associated endoribonuclease Cas2; EC=3.1.-.-; | chromosome | CDS | 130865 | 315 | - | 0.590476 |
| cas2-3 | CYA_0885 | CRISPR-associated protein Cas2 | RecName: Full=CRISPR-associated endoribonuclease Cas2; EC=3.1.-.-; | chromosome | CDS | 892609 | 279 | - | 0.591398 |
| cas2-4 | CYA_2539 | CRISPR-associated protein Cas2 | RecName: Full=CRISPR-associated endoribonuclease Cas2; EC=3.1.-.-; | chromosome | CDS | 2559707 | 279 | - | 0.562724 |
| cmr4 | CYA_2545 | CRISPR-associated RAMP protein, Cmr4 family | SubName: Full=CRISPR-associated RAMP protein, Cmr4 family; | chromosome | CDS | 2564341 | 771 | - | 0.553826 |
| cmr6 | CYA_2542 | CRISPR-associated RAMP protein, Cmr6 family | SubName: Full=CRISPR-associated RAMP protein, Cmr6 family; | chromosome | CDS | 2561306 | 1959 | - | 0.557938 |
| dnaA | CYA_0001 | chromosomal replication initiator protein DnaA | RecName: Full=Chromosomal replication initiator protein DnaA; | chromosome | CDS | 71 | 1404 | + | 0.571937 |
| dnaB | CYA_1550 | replicative DNA helicase | SubName: Full=Replicative DNA helicase; EC=3.6.1.-; | chromosome | CDS | 1559184 | 1776 | - | 0.603041 |
| dnaE | CYA_0057 | DNA polymerase III, alpha subunit | SubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7; | chromosome | CDS | 53979 | 3486 | + | 0.546758 |
| dnaG | CYA_2329 | DNA primase | RecName: Full=DNA primase; EC=2.7.7.-; | chromosome | CDS | 2332788 | 1896 | - | 0.616561 |
| dnaN | CYA_1647 | DNA polymerase III, beta subunit | SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7; | chromosome | CDS | 1646277 | 1365 | - | 0.621245 |
| dnaX | CYA_0563 | DNA polymerase III, subunits gamma and tau | SubName: Full=DNA polymerase III, subunits gamma and tau; EC=2.7.7.7; | chromosome | CDS | 575990 | 2079 | - | 0.63925 |
| dprA | CYA_2512 | DNA protecting protein DprA | SubName: Full=DNA protecting protein DprA; | chromosome | CDS | 2522681 | 1146 | + | 0.659686 |
| gyrA | CYA_1415 | DNA gyrase, A subunit | RecName: Full=DNA gyrase subunit A; EC=5.99.1.3; | chromosome | CDS | 1422999 | 2541 | + | 0.634789 |
| gyrB | CYA_1523 | DNA gyrase, B subunit | RecName: Full=DNA gyrase subunit B; EC=5.99.1.3; | chromosome | CDS | 1535547 | 1929 | - | 0.612234 |
| holA | CYA_1511 | DNA polymerase III, delta subunit | SubName: Full=DNA polymerase III, delta subunit; EC=2.7.7.7; | chromosome | CDS | 1519335 | 978 | + | 0.5818 |
| holB | CYA_1270 | DNA polymerase III, delta' subunit | SubName: Full=DNA polymerase III, delta subunit; EC=2.7.7.7; | chromosome | CDS | 1285137 | 1014 | - | 0.648915 |
| hup-1 | CYA_0305 | DNA-binding protein HU | SubName: Full=DNA-binding protein HU; | chromosome | CDS | 312014 | 327 | - | 0.636086 |
| hup-2 | CYA_0940 | DNA-binding protein HU | SubName: Full=DNA-binding protein HU; | chromosome | CDS | 951098 | 318 | + | 0.566038 |
| ligA | CYA_0803 | DNA ligase, NAD-dependent | RecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; | chromosome | CDS | 814452 | 2022 | - | 0.653314 |
| mfd | CYA_1763 | transcription-repair coupling factor | RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; | chromosome | CDS | 1767740 | 3471 | - | 0.60242 |
| mutM | CYA_0203 | formamidopyrimidine-DNA glycosylase | RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase MutM; | chromosome | CDS | 208311 | 852 | - | 0.658451 |
| mutS | CYA_2035 | DNA mismatch repair protein MutS | RecName: Full=DNA mismatch repair protein MutS; | chromosome | CDS | 2052972 | 2649 | + | 0.652322 |
| mutY | CYA_0809 | A/G-specific adenine glycosylase | SubName: Full=A/G-specific adenine glycosylase; EC=3.2.2.-; | chromosome | CDS | 820043 | 1077 | - | 0.620241 |
| nrdJ | CYA_2169 | ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent, intein-contatining | SubName: Full=Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent, intein-contatining; EC=1.17.4.2; | chromosome | CDS | 2181900 | 3468 | - | 0.623702 |
| nth | CYA_0912 | endonuclease III | RecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; | chromosome | CDS | 921363 | 696 | - | 0.642241 |
| pcrA | CYA_1321 | ATP-dependent DNA helicase PcrA | SubName: Full=ATP-dependent DNA helicase PcrA; EC=3.6.1.-; | chromosome | CDS | 1336315 | 2331 | - | 0.565423 |
| phrB-1 | CYA_0303 | deoxyribodipyrimidine photolyase | SubName: Full=Deoxyribodipyrimidine photolyase; EC=4.1.99.3; | chromosome | CDS | 310546 | 1467 | - | 0.658487 |
| phrB-2 | CYA_0780 | deoxyribodipyrimidine photolyase | SubName: Full=Deoxyribodipyrimidine photolyase; EC=4.1.99.3; | chromosome | CDS | 784262 | 1440 | + | 0.65 |
| polA | CYA_0531 | DNA polymerase I | SubName: Full=DNA polymerase I; EC=2.7.7.7; | chromosome | CDS | 546670 | 2787 | + | 0.564047 |
| priA | CYA_1466 | primosomal protein N' | SubName: Full=Primosomal protein N; | chromosome | CDS | 1472452 | 2394 | + | 0.665831 |
| radC | CYA_1690 | DNA repair protein RadC | SubName: Full=DNA repair protein RadC; | chromosome | CDS | 1689739 | 732 | + | 0.646175 |
| rbcX | CYA_1195 | chaperon-like protein RbcX | SubName: Full=Chaperon-like protein RbcX; | chromosome | CDS | 1208699 | 408 | + | 0.602941 |
| recA | CYA_1092 | recA protein | RecName: Full=Protein RecA; AltName: Full=Recombinase A; | chromosome | CDS | 1113642 | 1077 | + | 0.589601 |
| recF | CYA_2022 | DNA replication and repair protein RecF | RecName: Full=DNA replication and repair protein RecF; | chromosome | CDS | 2039458 | 1143 | - | 0.656168 |
| recG | CYA_2013 | ATP-dependent DNA helicase RecG | SubName: Full=ATP-dependent DNA helicase RecG; EC=3.6.1.-; | chromosome | CDS | 2028491 | 2322 | - | 0.647287 |
| recJ-1 | CYA_1120 | single-stranded-DNA-specific exonuclease RecJ | SubName: Full=Single-stranded-DNA-specific exonuclease RecJ; EC=3.1.-.-; | chromosome | CDS | 1146623 | 2229 | - | 0.645581 |
| recJ-2 | CYA_2826 | single-stranded-DNA-specific exonuclease RecJ | SubName: Full=Single-stranded-DNA-specific exonuclease RecJ; EC=3.1.-.-; | chromosome | CDS | 2843803 | 2457 | + | 0.64998 |
| recN | CYA_2624 | DNA repair protein RecN | RecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; | chromosome | CDS | 2641479 | 1707 | - | 0.636204 |
| recO | CYA_1394 | DNA repair protein RecO | RecName: Full=DNA repair protein RecO; AltName: Full=Recombination protein O; | chromosome | CDS | 1400048 | 906 | - | 0.631347 |
| recR | CYA_1368 | recombination protein RecR | RecName: Full=Recombination protein RecR; | chromosome | CDS | 1379706 | 600 | - | 0.628333 |
| rnhA | CYA_0798 | ribonuclease H | SubName: Full=Ribonuclease H; EC=3.1.26.4; | chromosome | CDS | 808142 | 501 | - | 0.61477 |
| rnhB | CYA_0822 | ribonuclease HII | RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; | chromosome | CDS | 836795 | 666 | + | 0.674174 |
| ruvA | CYA_0490 | Holliday junction DNA helicase RuvA | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; | chromosome | CDS | 507552 | 615 | + | 0.634146 |
| ruvB-1 | CYA_1812 | Holliday junction DNA helicase RuvB | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvB 1; EC=3.6.4.12; | chromosome | CDS | 1815754 | 1137 | + | 0.604222 |
| ruvB-2 | CYA_1850 | Holliday junction DNA helicase RuvB | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvB 2; EC=3.6.4.12; | chromosome | CDS | 1851392 | 1113 | + | 0.629829 |
| ruvC | CYA_1905 | crossover junction endodeoxyribonuclease RuvC | RecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; | chromosome | CDS | 1915477 | 582 | + | 0.647766 |
| topA | CYA_0561 | DNA topoisomerase I | RecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; | chromosome | CDS | 572482 | 2661 | - | 0.627208 |
| uvrA | CYA_0784 | excinuclease ABC, A subunit | RecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; | chromosome | CDS | 790054 | 2901 | + | 0.632541 |
| uvrB | CYA_2564 | excinuclease ABC, B subunit | RecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; | chromosome | CDS | 2587475 | 2088 | - | 0.555077 |
| uvrC | CYA_0207 | excinuclease ABC, C subunit | RecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; | chromosome | CDS | 211884 | 1866 | - | 0.581994 |
| xseA | CYA_1976 | exodeoxyribonuclease VII, large subunit | RecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; | chromosome | CDS | 1994055 | 1236 | - | 0.673948 |
| xseB | CYA_1975 | exodeoxyribonuclease VII, small subunit | RecName: Full=Exodeoxyribonuclease 7 small subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit; | chromosome | CDS | 1993838 | 237 | - | 0.586498 |
| xth | CYA_0466 | exodeoxyribonuclease III | SubName: Full=Exodeoxyribonuclease III; EC=3.1.11.2; | chromosome | CDS | 480687 | 786 | + | 0.610687 |
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