Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View as list

# Anaplasma phagocytophilum HZ, HZ

>APH_0994 conserved hypothetical protein
MYTQLKLFDVKEMHSYQCSDYVVLDSNRHTYNLLMNSDLWSSFVLYGVKG
SGKTHLAHLWGKLKQASFLTYGKISDAIQVIKESNAVIAEDIDSIPDEEW
LLHCYNYSKENRKPFLMTASVPPNLLNHSLKDLRSRIISTMSAKLVEPNE
ELLRIMLVKLFTERQLHIDIKTINYILNNVERSFKKLSDIVRLIDIELTS
SAGGVTVPFVRSIIRRVELV
>APH_0332 conserved hypothetical protein TIGR00250
MLCESIRELFSALEPGRRILGIDFGERKIGLALSDPTYLIAIPHSVYHRR
NMRQDLGELSAVLRSEDAAVVVMGNPLQSDGLEGEMCQIVRAFAQKLIKK
SGVSIYLHDERYTTAMASRATREAGLRRKESQKIDDKISAALVLQQVLDI
ARAEGIQATGGNNSCL
>APH_0849 conserved hypothetical protein
MDCRKIDTVVVPNRSDAECLQFYFSKQCGIEDNIEVLAFSEIVKSAYEDD
IEARAGALLLCMQFIEEWNALRHTDYPASLAKELLLMLDEIYLNCTDLDR
LSTSLEEEDLFGYRCLTSEFLIDFARWWKSTGHSNASAIAQVERFFSELC
LSGKKVAVAGIASNRAFSELLRSIFESISESFIILPDLDLEMPENKWKTL
EMGHYQYRFMKLLDELGIGREEVSILDQRDKNHLVDLAFNFEIPSLSDER
YCHIKEQQNIELVICGSENEEARKVIEIAQRYCCASGNDRDVFCGTEKNA
NNAVSTNNTASSSALNNNIALSQYASEIAGYTRSIQGACTVFLGSDSLSS
RIYSTLSLRDTEEVRCDDEHVISTLMLCVIEVVVSEGDAAHLLSMIKHGM
VTIGYEDKEAYGAAVCQFETEIIRKHAVSGFEAITHAVYEVGSAESREYW
RRVVEAIGPFMELDGKHSLGEIIQAHLKSIRNLVGGNSAYVKRDNCDGIF
ENIEAFFRNLTAYCKGKKIFTVRNYKHICKDLLECYFKDARNDIFSVGSV
RSEVVIISGFNEGGFAPVRRSSLLNNTIRKKLKIPTDEGYKGIFLSILYN
LFHAKRLYITRSVESCGKVTEAPLLIRYLDFLLSSFSNASKSSSDSTVSS
VDLNIDKSAYLSKFLCEPNPKLEVRSQVFSVLTAEALGMLISNPYAFYSR
YVLGIYPVKSVNTGNMAKNFAVTVRSIFLQYLKNMGLGSDYSALIDIAKR
EFATVCKSYPYIEKLWWPRFEAMAENFFQADRERKCNVSAIEVESDFTWD
VSEGIKVISKCDSVSYLRDGSPLVVCYKIGMVPSQVDIQCGFASRGIIDS
ICVSESNEKKDASFAYWRITPESVEITEIKDLPDVIKAAKEGLQNFLVKF
QEEMIPFYPREDFSKFVEYELFSRIREKIPQYGRPY
>APH_1371 uracil-DNA glycosylase, family 4
MTDEHNKPNVEDIKMFAEVLRFYHDSGVTHTLNDDLHPDDTLSPANFEKS
PVVPDRAKTRESQEIVLNKTSNKKSSSNANMLQWVEEARKAAANCVDLAE
LRAAVCAFEGCEIKKAAVNTVFSDGNPKSKIMLIGEAPGSTEDREGIPFC
GASGQLLDKMFAAINLNRSSNIYISNTVFWRPPGNRKPTDFELEVCRPFV
EKHISLVDPDVVVMVGSTACYSLLQTPDNISRLRGKFYEYTNSFLSRSIT
AMVIFHPAYLLRQPQQKRLAWEDLKMLRAYIETHKIQVNT
>APH_0933 putative DNA processing protein DprA
MFRKLLELYKSPRKALEALHEGACRDIATVCSVYDAEKEIEFCRRIGARI
IDIFDKQYPKMLSNIFDPPPVITVLGNEDLLQSPRTVAIVGSRDASANSI
RLAYELSLELSQMNFVTVSGLARGVDSAVHSVAYHGKPTIAVIANGINVI
YPRENAKLYKSIVREGGLLISELPFSAIPKASLFPQRNRIISGLSLCVVV
VEASKKSGSLITANFALSQGREVFAVPGSPLDSRCAGSNDLIKQGAYLIE
SATDIISVLGFSGMTGMEHALRDTQKRTSKNTTTTPVQDLILKNLSISPT
NIDDLVICCNLDVSVLLAALLELELAGRVERLPGNRFALIATFS
>APH_1361 major surface protein 2
MIRPLGMGIVVIFVLLGTAVTSAHADNDKSGFFVGLGYGLSVSQVHNFKI
DDGGETRWLFPFHERVHREELHSANFYWGPEVASEIRFQRGNTTFGGSAG
YLFSAVRLEIDLTHERSEILKSGLHKGRKGGGMPFVLGKHKAMVSLQRGY
DRIDLIGSLSRENVIAIEKYMVAELGYDQLRRLSVMQEEELKRVNKTKKV
VGAFPRNRSDNFFNLLDLMIVQSVLFTKALALTVEGAEVIEIMAIRNTTA
TLNLCYDFPSMELVKLNISPYTCAGIGGSVIGITKGHANLQLSYKLKLGL
NYRFLSNAVAYIGTSYQKVLGSEYYNVPLKRLVDDISPTNSVREKTSVGF
GLQYVGLELGARVSF
>APH_1223 recA protein, truncation
MKDSPSDKQRAVDAAIGQIERAFGRGSIMRLQNSPVEAVECVSTGSIALD
AALGVGGLPRGRIIEIFGPESSGKTTLALHVIAE
>APH_0819 hypothetical protein
MHASSRLNSLVLVSIKSLLNTDAAIDSTEFCDVMLNKIQNNTPYPEFYSI
LVFMIQYLHGMLNKYPQMPNYAIEDYSVYMLHLTDVLESITQISCLITQQ
ALLEESQPMGASWEKFDEAYSELFNALWHTVTIYRGENRTIIERNLELSK
VPSIIITMIITMQHYRARSMPVSMALNSSALIRENETIERCAAAMRIFHD
AVNLIPEYTVDAEDSPPRTLMYRDLLSKTEQTSRMVSLVNRHTPLRKRSC
VKNCLKEQFSLLMITIELLAKNVDAVYTYCYIPISKAKDIILSEAEAFAS
NACIDNRNSDAEHRVILTRFSAAFIPLYKSHIWSRLNNVNCSKRHHKVAN
SVSDCLRVLLKALELHNVSKEKDRLRAMAKTSEYSRIVEDFRKYLDELPE
LILEQKKYNGPEPKCTQVLSDAYISMLWIPEYIEQLLNAQLPLERKGTPR
NLMHAPSVKPGNTSKTKGAH
>APH_0572 DNA mismatch repair protein MutS, truncation
MSLITGPNMAGKSTFLRQNALIAVLAHIGSFVPAEHAHIGVIDKIFSRVG
ASDNIALGHSTFMVEMVETAAILNQATSKSLVILDEIGRGTAINDGLSIA
LAAIEHIHDVTKSRAICATHYHELPKLSSHFVYM
>APH_0471 exodeoxyribonuclease III, N-terminal truncation
MESAGSYSSEESRYIECTLECTGNKKIRVVSVYVPNGQEVESETFFYKLK
FLEHLKDRLLNIMKTEDFLIAGGDFNVAPEEIDVHDPKALDGRLCFHILE
RAKFREILNNGIVDIFRTFVGIDRKEFSWWNYREGGWQNNRGLRIDALLS
SPQIADKVLDCSILSKVRGWDTPSDHAPVMGDIDV
>APH_0903 helicase, UvrD/Rep family
MEYRDFPQANCTSQQVEEHYPEDFMLNLNAEQKEAVLQVAGPVLILAGAG
TGKTRTITARMGHIIKEGYAQPHEILAVTFTNKAAKEMLSRVNNIVTASG
IWLGTFHAIAARILRSHAELVGLSSNFTIISPDDQLQITKTIAADMQQGY
PATECKGILHTIQRWKEKGLLPHDITETELQRSSNSFALRVYEEYQERLK
ALNCADFGDLLLHNVTILSANPDVLAHYQEHLRYVMVDEYQDINTIQYLW
LRLLVRRHKNLCCVGDDDQSIYNWRGAEVGNILRFSDDFPDAKVIRLECN
YRSTSNILASASAIIDNNKSRLKKTLWTHNQAGQKVGLMKFFDGRLEAQY
ISEHIKSSYDYKFSETAVLVRASFQTRVFEEFFVRYGIPYKIIGGTKFYD
RVEIRDLVAYLKVVVNPNNDIAFEKIINKPKRKLGTSTVNKLRAYGRKHS
ISLTEAGHSMIKDGLLSDNTSNILQDLLKQFDDWREMLSRDSSVNVLKAI
AHDSGYIESLKKDGESGLSRIENIKELFSAVSGFDDVSKFLEHISLVAEN
DSLEEDNNYVHVMTLHAAKGLEFPLVFLPGWEEGVFPHEKSMNDITGNAL
EEERRLAYVGITRAREQLYISCAAMREINNWSQSMKMSRFIKELPREHVQ
VLHNMTGYA
>APH_0337 primosomal protein N truncation
MIYNARDMAIVLGKHVDIPVVLCTATPSLETMNNIQQKKYNHVVLKRRFG
EAVMPDIIVADMRKDELKKAWMSTCLYEKICETLAKQQQVMLFLNRRGYA
RLVLCKQCGHKVNCPNCCTWLTEHRVLGAMLCHYCAYSCEIPRECPSCQE
YNTMSPYGVGMERILEGIQELIDAEHFTILSSDIGIPANSQ
>APH_0075 putative methyltransferase
MIRITSGKYRGRRIFTGNSLDARPAMSIIREAIFNILRAYISIEDAQVCD
IFCGSGSLSFEALSRGAKHACLVDINAANLKLVRRTATSLGVEKLLSILC
CDVQYLSYAERQYNLAFVDPPYCRPELVEVTLKALSEKMWCVDGSIVVLR
IRKGEKQFAIPQEYTLMQTRVYGCSELMFLQV
>APH_0351 conserved hypothetical protein
MLDSLLVFDIETIPDTDSCNNLIGETVGEDDDILAKREAMANYHLDITNG
QNSFLRQPFHKIVAISFLRADIKRGGGYESFTLQEIRSGGTALSSEQELV
KGFLSYVSAIKPRFVTFNGRTFDFPVLKYRAMLHGVQAGYLYKAGDKWNN
YFQRYSVDWHCDLLDYLSEYGASAKVKMHEVCAVMGFPGKFGTDGSAVAE
LYDNGKLSMIRDYCETDVINTYLVYLRLMQHQEKIKTDCYNSCIVSLLEY
LSKSEKEHLLAFKAAWEKVSQGKFLLTP
>APH_1409 putative DNA replication and repair protein RecF
MSCKFQSYVQVVKLVNFRNYSKVELESNGKSVVLLGENGVGKTNILEAVS
LLSKGPGLRNVSADCMQNSGTTIPWLVHYNIVGNGEFFSVDITKKNNKRS
VTIDEKASLYSTLHKILCILWLVPQLDHILLKAPTERLRFFDRMVHIFDK
DYSLHMVKYEKAKRDRKKILQESPHNHHWLSSLEEIMSASGVHIAKIRQH
VLETLHATLAEHSSRSTFFKFIIRLESKVFELLDNPDKAVDAYAERLRSN
RNIDAARQCTTFGVHNDNFQVFNEKKDLVASSCSTGEQKILLLSLLLTAA
TAKHKIDGQAPIMLLDDIMSHLDPQHRKELMSIIEHLGCQVWITDVDEKN
FEGFRENFQYFHVANNNVCKM
>APH_0528 hydrolase, TatD family
MIVDSHCHLNYFDSASLRDIIDHACAVGVSLMQTVCTTIEEFPVLLEIAN
GYAQVYASVGVHPCNSAKGEFSSVDDLVAFAQNNKVIGLGETGLDFYRSE
EGIDKQEKSFLAHIDAARVTQLPVIIHSRNADTRMAEICASEMKNGAFKG
VMHCFASSMELARHSLDAGLYISFSGILTFKNAGFLRDIAKFVPRDRVVV
ETDSPYLCPEPHRGKQNSPEMTRFVVESLAQIWEESVDVVSEVTTKNFFT
LFDKCARLYYASEESNNLRS
>APH_0530 hydrolase, TatD family, truncation
MPIKKIDGVETDSPYLCPEPHREKQNSPEMTRFVVESLAQIWEESVDVVS
EITTKNFFTLFDKCARLYYASEESNNLRS
>APH_0258 ATP-dependent DNA helicase, UvrD/Rep family
MLLPENELIDVLRETCYQNADDILINRARNLFFRIPNILKVQTVHGFCKS
LISSFPSEAGISANFEVRELSESYPKIFYKLLHESDYIAEHLKEVACELK
ESTLFDLLYKIMKKPHIDLEVPQPTDLHVKPDHLLCPEEIIDALNCGGLR
DKKISTKLRSWNNLVHKTHKKIEEYLKTFICIASLEKKDISSIASKQVLQ
QCPTVGGAIVNEQEKLLEFAEQYYSARISKRTFHIMQLVRHGIRIYEYDK
KNAKYLNYDDIINLSLKLISDPTHKDFVLFSLDSQINHILVDESQDNSLE
QWHIVAELCNEFFTGLSSNTNQRTLFVVGDVKQSIYGFQNARPDYFHFMH
KYFAQKSTNPVTIQLSDSFRSTPPILALVDKVFNTLREQVSFQSQEIVHN
TYRANEYGYVEIWPLLRSTRRKKPYAWDLESIKECGENADHSLLLAQTIS
QTISSWIKEERKLQAKNRPVEASDILILVRHRSVFVDQMIASLKQENIPV
TGRDRCNIMDYVVIQDLVNLGEFLLLPENDISLATLLKSPIFRYTDSMLF
EIVSSSSEKCSLWNKLQKFTTMQETVKYLKLLISISQNRSPLDLYFFILS
QHKEQFIKCLGQTSVEIIEEFINLLIAFQSNNLNLLEYFIQWIKSTNPVT
KSDMSIAKNLVRIMTVHSAKGMQAPIVFLPDTTSVPKCDLQVVFDDKNTP
LWCASDTNSYCKNLKLRKSQEEYNEYLRLLYVAMTRAEDELYIAGIGTAN
SRSWYDIITNSSAEILHKKNTCLSPMFPEPIDVLYLEH
>APH_0783 conserved domain protein
MDTVVGHSAQKETLWQNREVNTWLLCGKRGIGKATLSHAYARFLTRSDSL
DSHPDVAIIDDETSPIGIDKIRKIKHFLHMSPISAERKIVILDSIDGLNS
NTINSMLKILEEPPQHSLILIISHNLYSVPIVIRSRCMILSFSQLSLEET
RQVIGLKFPDMNLEDKAVALYPGIPGMVSEDIDKEITLYENIIDLIQKKN
VSDTIGNVLETELPMHKIEYLSLKAIYDTILSTLRLHESNTNYVTEANIL
AMLDKYSKAQEIFATARKLHIHREATLFRIAEIISNLLKSKK
>APH_0736 DNA repair protein RecO
MQWQDHGMIVSMTPYGDTRSILSVFTRNHGICNAMIRLNKKKQSLQIGDR
VCVTWRARLANNLGYFNSCEIISSAFYAYFQDHSKLLCLSSVTSTIYKSV
PTNDAHPILYDYLIEFAEAAECGGHWYNEYLKLELEILSQLGFALDLSRC
AVYHCEDNLLYISPKTGRAISERAGVSYRHLLFPLPQILRDLHNGTHTEQ
CSRKEFLLCLQILGYFLHRHLLSDDSKFLEQRKEMTALIYEEEAF
>APH_0708 hypothetical protein
MNYRASIIVSMLAVLILIAAMIAILLFRSYMDPAKFWWSFAIILSCFVLS
SIICVASFIKYASNYLQDKKTAFVIEVGNSDILNELKNALTYSSHLNNFL
ISIGGEERSYTFRKSKSGWFFSKNWKKEEEKNDYSANRVYLNLCTTLITH
CFGNVSKFAEAVSNIIEVSLVFSGEGKEAPTLRLCFQEALKRNSFFSYVY
ESCRTQIEDSTFFRNYIELLKILFKSDIDKDATIAKKNSDSYKVLRKKAI
QRMLSDMAQNKKVFHAVGDSKTVLWEEHHRKEYLQDLDVIHRQASSLQSY
EIDSYNSDYSNGVLNFLNAVTPNNGTLLRGHSSQILLHLLSNNRAKYAFA
SMNETFGSTISDKLEEIGCKSGKCLRIMRLLMSNNVTLEQLIELFGSKEG
YCISYYIFNRFKNSKWRGSDWIGYINQKARDLFPKFRLRNDPYNDNYDLL
SRDTTKEGNRVESYANDSIGSEYCDTLDYQIFDLLERKCLSLSKREMSLS
AAIDFIAEESLSDLCCEPIWNTYSVEKRLHVDIPVARHEEAILFSLGDEA
AINNVKSLPIEGITSDVSAYIGDDISIERYPYRNSSFLC
>APH_0474 dnaA, chromosomal replication initiator protein DnaA
MDRDSTYDGHLSWQSVQKKLRDFYGSAAYDSWLSALVYSGYENGRVILLV
PTRFIKEWILVHYLEKILEYWRGENSAVYCIDICVADGAESSVLQGNRGV
SVRSTEAQEVSSVSTYEHLSSPLDPRFTFDNFVVGKPNELAFAAARRVAE
SSEPIPGSNPLFLYGGVGLGKTHLMHAIAWYALGSPRKRKIAYLSAEKFM
YQYVTALRSKDIMLFKEQFRSVDVLMVDDVQFISGKDSTQEEFFHTFNAL
IDQSKQLVISADRSPSDLDGVEDRIKSRLGWGLVADINETTFELRLGILQ
LKVEKMGIHVPDEVLEFLAKNIKSNIRELEGALNKVVAHSSLVGSSVTVE
LASDILSDLLRANHRLVTIDAIQKKVAEFFGIRLEDMYSARRLRALARPR
QVAMYLSKRLTQKSLPDIGKSFGGRDHATVIHAVKQVEKFIDTDSKLAGD
ISLLIRMLR
>APH_0323 dnaB, replicative DNA helicase
MGDLVHSSEEKGLMKSIAHLPNNVEAEQMLIGAMLRDNRICDALEDMISS
EVFYDPLHGRIFDQVVKINKRGLSANEISLKMFFDNDEALLECGGGEYLA
KIAAKASVVFDIRSVARVVFDAHLRRCLISLGSDIVGKAYDYDSDNPAEQ
QIENAAQKLFLLGNKGKADRNYHTFATLIGDVRKKIESARHNKDALQGIT
VGLKDLDLLLNGLQNSDLIILAARPSMGKTALALNMALSACKSLKEKGQS
VGFFSLEMSAEHIASRLISIESEISSYKALSGKISSGDLQQVLRASENIC
DLPLVIDDSSALSISGLRTRIRRMHQLHNVGVIFIDYLQLIKGTTKRSGD
NRVQEVSEVTQGLKAIAKELNVPLVALSQLSRLVEQRDDKKPQLSDLRDS
GSIEQDADVVMFLYREEYYELRKQPTEGTPKHAEWQMKMDSISNLADVFV
SKQRNGPIGNVRLFFEPEKGKFRDYTARYGMYDQS
>APH_1003 dnaE, DNA polymerase III, alpha subunit
MDGIFVHLRTHSDYSLLEGMIKVESLVAMCVEQKMPAVALTDSGNLFGSL
EFSDCAARAGLQPIIGCNIMVEESGNNLGNILLLAKSAEGFANLTNLISN
GFNNSQLEKINRVNIDDLLKLNGGLIALTGGHDDILARALLNNGDDLRAL
DSILQVFKDNVYVELQRHGLNGQREVEELLIRFAYERNIPLVATNDVFFA
CRGDFQAHDILSCISTGAYVVQEDRHRLTPEHYFKTASEMYELFSDVPEA
VLNTSLIAQRCSFIQEVRKPQLPHFPCFEGRTEAEELTECALAGLEIRLK
SKGIGDDEEQRDLYLKRLKYELGVVISMEYSGYFLIVADFIRWSKQNDIM
VGPGRGSGAGSLIAWSLGITDLDPIEFGLIFERFLNPDRVSMPDFDIDFC
QEKRDKVIEYVKEKYGYVAHIITFGKLQARAVLRDVGRVMQIPYAQIDRI
CKMIPHDPISPVTLLEAIEMDQNLKAEQENDETVAKLIEISLKLEGLYRH
ASVHAAGIVICDQPLENFVPLYYDKSSSLPITQYNMKYVEKAGLVKFDFL
GLRTLTMIDQICSLIRARGEEIELSKIPLNDKKTYEMLSAGDSIGVFQLE
SAGMREAISKLRPDSIQDIIALISLYRPGPMNNIAIYISRKHGLEEPDYI
HPMLECVLKETFGVIIYQEQVMEIARILAGYSLGEADLLRRAMGKKIKEE
MDRQRQDFVDGAVSNGIEESKASYIFDLVAKFAGYGFNKSHAAAYALISF
QTAYLRANYTKEFFTASMNLDIDDKDKLGLLCQQAKMCGIDVMPPDINLS
SAEFTVSGNSIRYGLGALKNVGQLTAHEILPVEGGRYSDIWDFAGNVRIR
SPLKRTLESLIKSGSLDGIHPNRRQLFASLGIILNIIENKKVSMDAHQFS
LFSEKEEGQLEEVDDWTEDEKIEHEFATIGFYLRYHPLSKYEQVLGKFGV
RFVSSTQEEKESGVTKRAGVVSSVKMRSANKERFAIVRVSDPHGVNDVAF
YNSKTIEENRDLFNSGVPVMIDMDYNASKGRLVGRNICNFHESISLMMRR
VRSIAIHTGQNTLIAHMLQEVLKRDAMGAEVYIELLSKGHLVLIKLPGAF
LVTPEILAQIFNISWVDDITINHRGYL
>APH_0571 dnaG, DNA primase
MQNNNSITDNITLLRSKIRLIDVVAGKIKLTKRSGNNYVGLCPFHSEKTP
SFNINSENELFYCFGCGATGDVIQFVSDTEGLDFKQAMQYLSERYHVELL
DDKRPDSSHSALYDVMEKAAVFLSQQLSVSKAALSYLKDRGISDSTINRF
RLGYVTSTGIKAHLLSLGISMEKMSETGLLTKSVQDCLYNRIIFPICNPM
GKVIALGGRSITPGHTPKYLNSAENALFKKRECMYGLHLAMGQAKKLGKI
IVVEGYMDVLMLSQLGIHNVVGLLGTSMTEFHLKNIWSVVPEIIVWLDGD
FAGLKASVKIAQLAVSIMKSGSSIRFISIAEGKDPYDICREQSIDFVKDL
IERAKLLSEFIWEYELSSSGIGDKVVPEQCMMLEGKIKEYTSRIQDPNVA
KHYRNFFYQQMKALQGYKKWNANSYAGTAVSRANKVKSCDRLQDVSMKVC
MEENYQLRVMYTIIECPKLLDDPAIFEQFASIDFSSVDRRVLQQHIVDIK
STCDNVFLKQDLVEKLRPRGQNLEAILQYIIRSMANVGCAFIVPGLSDES
IEKLAKQEWEKLMLSRQLNEIHEQIVKLRLEGKNDVALNLSEYAREIDDK
LRSLWKC
>APH_1097 dnaN, DNA polymerase III, beta subunit
MSGEISRGLDFSISREDLLQALNYVSSVIERRNSIAVLSCVRIEAKGSVI
EFTSTDLDISIEACVQANVATGGVAVASAQLLYDIVRKLSGEADVRFKLN
DGKLLVACGNARFYLHVISPEKFPDIEGSSLDCGFDIPATSLAELLNKTK
FSMSVEESRYNLRGVYFHVDDEMLCCVATDGHRLSLAKISKPEGLHSGIA
VIIPRKTVNEVLKIIGHGGGDAAQMVSVGISNRKICFRYKGYFMVSKVLD
GTFPDYAAIIPTECGNSVSIDASVLQSAVDRVSVVVFDKVKAIKLSFTEG
KLVLSSASSDQGDASEELSVDYEGDEVVIGLNARYLMEVLGSIKGVCEIV
FSDGSAAVLVKDGEYGMHIVMPMRI
>APH_0730 dnaQ, DNA polymerase III, epsilon subunit
MKVREIVLDTETTGLDADGGDRIIEIGCVELVDYVMTGRVFHKYIDPERD
ISVAATRVHGITRESLIGMPKFAEVADELLDFLQDSALVIHNARFDMRFL
EVEIERLSNKRAITNTIVDTLEMARKKFPGMPASLDALCKRFNISTQERK
FHGALKDATLLARVYVELLEALQRRLVFSQEGDDSKQVSVIHDKAKRVVY
PARTFTLSSEEKRLHRQTVSKMKNPIWLMCFDEKEFFCNENINS
>APH_1348 dnaX, DNA polymerase III, subunits gamma and tau
MNLALKYRPSNFDDLVGQDVLVRILRNSFSVGNLNTPLLMVGASGVGKTT
CARIVSLCLNCENGPTSSPCGTCATCTSIKNSHNPDVVEMDAASNTSVDD
IRVILESSNYLPVSSRFKVYIIDEVHMLSTSAFNALLKTLESPAQHAKFI
MATTEVRKVPVTVASRCLRLDLGKLPIKQLYDHLVKISAKENIAHDESSL
MLIAENSSGSVRNSLFLLEQALIYSNNKISLQEVRELLGCVDKKILEGIV
RDIISSDVKSAIDGFRELCNASTPVIIFEGMQKVVYGLCMYSIDKDFHHG
LGEELFTAEKSGSTPFLSRLWQLVLHGIQEIKSSESPEQAGEMLIVRLCY
LSDLPSPQKIASSISSKYGDMPPSGGQGRSESLNAGSMSARSRPCFMGAA
SSPTNAVGGISVLGDKKNNDVNDRGKVYNPDDDEAVVDVVKNFDGASVVS
FKSFDV
>APH_0899 gyrA, DNA gyrase, A subunit
MSDGVLPVSIEKELEDSYLSYAMSVIVSRAIPDVRDGLKPVHRRILYSMY
KSGYDHDKPYKKAARVVGDVMGRYHPHADTAIYDALVRMAQDFSLLVPLI
DSQGNFGSVDGDPPASMRYTEARLAQAAHFLLNDIDEDTVDFRPNYDENE
QEPVVLPAEFPNVLVNGAGGVAVGMSTNIPSHNLGEIIDASVMYIDNPEV
TLEELMTVIPGPDFPTGGVIMGDAGIKSAFATGRGTIIIQGKTHIEELPS
GRQAIIIDEIPYQTNKAKLVERIHELVKEKKIEGVSDLRDESNKSGIRVA
IELKKQINSQVVLNQLLGLTPLRTSFSINTLVLDNSRPRVMSLIEIIETF
VAFRKEVLVRRTRYRLKKVRERAHLFIGMYIAVLNIDEIVAIIRASKDAA
EAAAALRERTWSPSEEVRGMIELVSDSTGVIEGGRYRLTAPQIKAILEMR
LQRLTGLEKGKLEVELQSMVALITEYTKILSTDSLLMCMVREGLLDVKRR
VATPRRTTIEESKGDIDAESLIPREEMVVTVTMNGFVKRVKLSNYRAQKR
GGKGRVAQGIKEEDVTTKLFVVDTHTSVLFFSNVGKVYKLKVYKLPLGEP
ASRGRSLVNIFPLAEGETITSVMPLPDVGVDGGVESMDVVFATSSGNIRR
NALADFQYVPSNGKIAMVLTPGDQLISANVCVSTDHVLLSSRMGKSIRFS
VGNVRQFKGRMSDGVRAIKLAEGDQVISMSVLHGSEASSEVREAYLKIPV
DSRIKAAESDGESIGKRVSGMLEGLQLSEETFVDMVKKEQFILTVTENGF
GKRTSAYEYRTTARGGVGVLNILTTARNGKVVASFSVAHTDQVMLITDKG
KLIRISVSDIRIIGRSTQGVTLFKTEKGEKVVSVALVIDSGDNCDDDEGI
GGEVSA
>APH_0716 gyrB, DNA gyrase, B subunit
MSSYNASSITVLRGLDAVKKRPGMYIGDTDDGSGLHHMAYEVIDNAIDEA
LAGFCNKIDIVIAADGSISVTDNGRGIPIDIHEEEGISAAEVIMTQLHAG
GKFDHNSYKVSGGLHGVGVSVVNALSSWLELVIYKEGREYFMRFEEGKAV
APLKMVGECGNKKGTCVRFMPSSDVFSFTDFSYSTLENRIRELSFLNSNV
SISLKDLRESPVLESNFGNVSDAATKGVSLFVEYLDRNKTPVTPVITLSG
IMSGYEISVEVSMCWNDSYYENMLCFTNNIRQREGGTHLAGFRSALTRCV
NNYATNEGYLKKAKVSIIGEDVREGLTCVLSIKMPDPRFSSQTKDKLVSS
EARLVVESIMFEKLSSIFETNPKLAMSVVERVIRSAKGREAARKAREVIK
SRGTLDFTSIPGKLADCQEKSPELSELFIVEGNSAGGSAKQGRDRRCQAV
LSLRGKILNVERVGLDRTLSSSEITSLIMAIGSNIGIGSFDISKVRYHKI
IIMTDADVDGSHIRTLLLTFFFRYMRELIDAGYLYIAQPPLYKLTKHKKD
TYIKNDEALSDYIVGNATKNLVLSGAGECSGDELKAVLRKCVRIANITKT
YSRIVPQEVLEALIVRYKRHGMGSSSEIMAYMNSMFPEYEWNVEVLEDGR
LQILKLSQGMVDRYYLDADFMNTRDVQTILSVLDGIENVFTEDTVLTAKD
CTIRVHSPCVLASSVVEFGRKDMALQRFKGLGEMNADQLWDTTLNPQTRT
LLKVKIADAEAADAIFSVLMGDFVEPRRDFINNNALKVQNIDS
>APH_1252 holA, DNA polymerase III, delta subunit
MKVTASKLKDFFSNPGAYGSVLLYGNDYSRISHYSQKIINLLTCKEEFSV
LRTEFSHASKEPEQLFVDLSTVPMFHQKSLVILTDAKDSLSPDLRTAVDN
LNPCHCYVIVQAKELSSTSSLRTYYNNHVMYAAIACYKEDNINNIVAEFL
AENQVTYNTETFALLCNLLQTSNACIQPELEKLLLYLGTKRNLSIEDLQE
SFAADFDPALDDICVAIADGNLKSFNRAADALLQNKIAAVLIIRSSIKYF
MTLEYLLRKVRSGCDINTAVKSVQPPIFFRLVAQLKKHVSTVPYQMVQLI
LRRLHEAEVQCKLSDSSQESMFRYLMYSLILSIQQIRR
>APH_0784 hup, DNA-binding protein HU
MSKEIIVRALMSGLGFTKKDSSSAYDVVMSAIKTALETNHSIRLHNVGTL
HVIQCAEKKYHNPKTGHLETLPPKRRVRFRSSRKLLDTVNV
>APH_1281 ihfA, integration host factor, alpha subunit
MVCCAWYSMVQTLTKARIASMINREIGLSREDSLAIVGEILDEMSSSLVR
CGSLKISSFGIFKVIRKKERVGRNPKTLEKFVVEEHNTVTFCPSVTVKRF
INGDET
>APH_0271 ihfB, integration host factor, beta subunit
MLRSDLIRRIARKNPTLGESVVSQILNVFFQSILQHMHDDSRVELRGFGS
FASRSYVLKSANVALGKVQYKRMYFRPSEKLIKAVNQPAHPKSGSHS
>APH_0138 ligA, DNA ligase, NAD-dependent
MSDNDSRRRLADLNAQLKLHDVLYHEHDAPEISDAQYDALVQEKRELLEK
FPELSAYNDYEGVIGALTVDARLPKIAHREPMLSLENSFTIQDVEKFISR
VKRSLNMDPEVSITIACEPKIDGLSFAALYEKGSLIRVATRGNGHLGEDI
TNTAKVIRKLPHKIANAPEVLEVRGEIYMHHSDFEKLKDVCNFANPRNAA
AGSIRQLNPKIAEERNLRYVAYCIVNSALASQEAILKQLAEWGFCTHTEV
LFADNMDDALSFHTRMYNTRSTLGYDIDGIVYKVNDTHLQKLLGSTSKYP
RWATAHKFPSTEAITKLRDISVQVGRTGVITPIAELEPINIGGTLVSRAS
LHNLNEIARKDIRIGDSVIVKRAGEVIPQVVGVDHTARCNSAVPEEYVFP
SHCPSCGSTLSRAPGEVAMRCTAELSCQAQVLERVKHFVSRDGLNIVGLG
EKQIEFFCNASYISNVADIFSLREKISHMNLSAEHGWGEKSIALLINAIN
ASTTVKLSNFIFALGIRFIGKGAAKLIAEHYRSYSAWVRAMTSLANGEDP
DNIHGIGLKSIESLRAFFSSEDNLRVLQTLEEKLNILNEIANTETASPIS
GKTIVFTGVLEDMSRNEAAKYAETLGAKVGNTVTTKTDILVAGSNSGSKL
DTARKLGIQVMNESEWKDLLKTVSNSE
>APH_0107 mfd, transcription-repair coupling factor
MDMGSSEIVTGIAPELEDALITEICRNNPKKSFVCVLQDDKPLELLVKTL
KFFDSTHNILLFPAWDTCTYKHTSPSSYVMTHRVKCLLDLLSVGSKPYIL
LTTISALIQKVLPKNAVSSSTLHIEAGKSLSMDELTLHLIEHGYVKSSTV
VQEVGSFAVRGDIVDIFQAVNENPVRIYFDYDIVESIKFFDPDTQITCSE
QILDIVIFSASELIKNDGNIARFSEKCSHLRSNNPPLYEAVVHRQKFEGE
EQLLPLLQADALVTLFDYIQEAELVLSEATFSNIKQRIENIWEQNDTQDC
TTHCTSLFLDLQSYEQVLARFHKILLCRFDSAPQSIVQNPATVALTKSTL
ALLPDLKLQARERGCNIFSVTANHMQEAKKQVLLACYSEESMQYLVEKFK
HFDMHISRVSSFSDITSKYSTAILPFQHDVETEDFIIITEHSLLGRQCSI
KKARRTVTNNASELTIGDVVVHKDYGVGIFIALRTLTVCGSCHDFVEIKY
RNDDKLFVPVEDTDLITKYGINTDVVLDRLGSSAWHDKQNKLKKRIDDIA
KTLLHAEAMRKLADGSRFLPSSLYIDFCKECPYVETEDQLKAIADVENDL
ARGKVMDRLICGDVGFGKTEIALRAAFLVVNEDITCQVAVLVPTTLLCRQ
HFLAFKERFKNYKVNIQQLSKATAKKKQQIREGLEEGSINIIIGTSALLS
DSIQFLDLRLLIIDEEQHFGVQQKEKLRLLKHDVHVLSLSATPIPRTLHM
SLSNIKDLSILRTPPIGRTTVEISITHFDEKTIKTAILNEVNRGGRVFFT
CPLIADIEPVLTRLQKLVPEVKIAVAHGGTAPLALDKIMNDFFDGKFSLL
LTTSIIESGIDIPFANTIIIYNADMFGLAQLYQLKGRVGRSTTQGYAYLI
LSNKATSNSPGMKRLEALKSLNSVGSGFALSLQDMDMRGFGNLVGEEQSG
NIKEVGIELYHRMLEEALETCKMTTESSAVSCHNIKVDINANVRIPESYI
QELELRMQVYKKISSLKTPEEISRYSEELKDRFGMPPREVINLLDIIHIK
HLCARIGIAEITHFKNHLTLLFGRSFTPQESLLKYFVNNAGIFTMQGNSV
NVLISAVHANNVTRYLIACLRKINSLLTHTPASKETKTD
>APH_0939 mutL, DNA mismatch repair protein MutL
MPIVVLSAQTINKIAAGEVIDCPASVVKELVENSIDAGAKTINVHVDKGG
RNLISVSDDGCGIACEEMEKAFIGHATSKLIDGDLANVKTMGFRGEGLTA
VASVARVKMVSKHVDAERAWSITFEGGEKTRDLTPGVLSCGTHVEVRDLF
FATPTRLKFLRTEKAEMQNIVDLLNRLAMINYTIAFSLTIVERQIFKYSA
QESLIERLKEMRAFGEVFCEQSLEINHSIDHVRVYGHIGLPTFNKSKPGM
VHTFVNGRPIYSTLLLGAVKSAYHGLIPKDRHPVVVLALDVMPAYVDVNV
HPSKMEVRFQDKRLVYKAVLDALGEALSSNVYARFSPAATTSEGHDHFAM
DSIEKTYGKFFSEDTEAASTMQLQPEVLNHNIPLLFGSSHVDDSKGTHDT
RFCADHTHHNDTKGSVHTKSFSARSSSSAESKMEQGCMLEEPPLGYAVCQ
LFERYIISRAGDYVIIVDQHAAHERLVCEYIKKVTEQEGIKRQVLLMPEF
IELGNEYELELLTEYREKLRDLGLIVEPMGDLTVVVREVPAIFGVVDAKA
LISKILESIMAKGDELFVKGKLSHICGTVACYSSIRSGRIMKLEEMNSLL
RHMESTPHSGQCNHGRPTYVKLKLSEIDKLFERT
>APH_0411 mutM, formamidopyrimidine-DNA glycosylase
MPELPEVEVIARSLADKIIGQRIRDVEVKRRDLRVRIADDFEQLVTGREI
CSVYRVAKYLVMQLDSGAKLVFHMGMSGRILYMHAPVPEKHDCVVFAMQH
GYSLVFNDTRRFGLVTLLDGEGYRSLLEKMGPDPFSEAFNADCLLNMHGK
ARIKSVLMNSAVVVGIGNIYASEILFTAAILPHREVSTLSREECCRIVES
TREVLKLAIATGGSSIRDYRTPTGDVGNFSKHFRVYGRKGEKCYTCGGEI
QVEKQGGRSTFFCRHCQK
>APH_0857 mutS, DNA mismatch repair protein MutS
MSNNTEYTPVLRQYRALKEQYGECLLLYRLGDFYELFFEDAVIASKTLNI
VLTKRGTDTPMCGVPYHSSESYIGRLVKSGYKVAVCEQIETAEEARKRSV
RALVRREVTRIVTPGTLVEDSLLDAKENNYLACISNIGERYGVAWMELST
GLFHVRASKLEDLDSEIQRLGPSELLISDKLKEQQSMELVLKRHRCAITS
HNESFFDSKRAEKVLCGVYGVTTVQGLGDFEEVEVSACGSLLEYVRMTQR
GSLPKLSYPKVRDSNSFVLIDGPALRNLELFSTQSGEKKGSLISTIDHTV
TAMGSRMLKRYLAFPVACHNVINGRQDAVEFFVSNRSLCEVIRGVINGFP
DIERILTRVKFSKCSPKDIHLLGRALSKIFELSRIISRSTHAIISKILVS
LGDHRDLLKLISEVMLENNATITKDGGFINPGCNERLAELARIQNDSGVL
IQRLRDKYRALTGISSLKILSNNLLGYYIEVSSSYKVSDESFVRRQSLAN
STRYTTAELKELEERIVSAQSESADLEAQIFKGLCSRIADECQDIGLAAE
AVAELDVLTTLAEVAVENNYVRPIVDDSKQFKIVRGRHPVVEVGTDFIAN
DCDLSEGNSMSLITGPNMAGKSTFLRQNALIAVLAHIGSFVPAEHAHIGV
IDKIFSRVGASDNIALGHSTFMVEMVETAAILNQATSKSLVILDEIGRGT
AINDGLSIALAAIEHIHDVTKSRAICATHYHELPKLSSHFENIRFFCLRI
EEWKGEVVFLHELIPGISSRSYGIHVAGLAGFPKGALERAKFFMSKFDEA
EHYRSIDSIDITSGRHITDE
>APH_0897 nth, endonuclease III
MQKADIIFSRFFSDNPHPRIELQYRNEFTLLVAIVLSARTTDVSVNKITA
KLFDVANSAKKMLALGESGLKRYINSIGLYNSKAKNIIQLSEIIENTYGG
TIPRDFDALTALPGVGRKSANVFLNSCLGVPTIAVDTHVFRVSNRIGLVQ
ESSVLGVEKSLEKVVPEKWKLYAHHWLVLHGRYVCKARTPLCGKCIVSDL
CASKSVLLR
>APH_0001 polA, DNA polymerase I
MMEKKSFVIVDAYGFLFRAYYALPGLSTSYNFPVGGVYGFINILLKHLSF
HDADYLVVVFDSGSKNFRHTMYSEYKTNRPKAPEDLSLQCAPLREAVEAF
NIVSEEVLNYEADDVIATLCTKYASSNVGVRILSADKDLLQLLNDNVQVY
DPIKSRYLTNEYVLEKFGVSSDKLLDAMALTGDASDNIPGVPSIGVKTAA
KLINEFGSLDNVLNSVEQVAQKKCRDMLTEYADRAILSRDLISLCHDVEV
EGDLEKYAKRVPDPVKLMAFLEKYELTSLEGKVAKYCKMVAAPIQSSEVV
KKENEKCIDKLEEFLEQCQRSGLLGLYIEVEQGFISTIFAACDETRSFTV
SSPEKVQKFVAAVTPILHSDSVLKVVYDAKSMMQFFPELRAFDDIMIMSY
SLDTGHHDHGFDSMSQRHLGQIFGITNGCILIRLHRVIMRKLFSAKLYTV
YYTLERPLVPVIYELEKTGIKIDTELLKQLSDEFSLSISNLEEEIFGLAG
CKFNIASSQQLGKVLFEHMRIGGAKKMPSGSYCTNAEVLTALALDGVEVA
DKILKWRHFTKLKSTYTDALVRQVDANTGRVHTKYSMTATATGRLSSSNP
NLQNIPIRSKDGEKIRSAFIAEKGHKLIAADYSQMELKILAHIADVKAFR
QAFAEGLDIHVVTAQQIFGEYYEIDYELRRRAKSINFGIIYGMGSYGLAR
NIGISRREASEYVEQYFQYYPEIKRYMETTKAYAKKHGYTITAFGRKCFI
EGINSPKRALSSVAERAAINAPIQGTAADIVKKAMVRLQDRLTQGTMLLQ
VHDELLVEVPEEHVLSVARLMKEVMESAVVFSLPLDVNISVGDNWGDMVE
IEV
>APH_0356 priA, primosomal protein N'
MIAEVLLPIPLDRPFYYLVPDEIQISVGDYVRVPFGNRVALGLVTDLKNS
IESDLELKYIKDKLILPSMAPSFIKFIQWVSNYNIVPIGMVLKMVFAGMP
RGKFMPLGGDLAQSTSVNDVNIEAGKLPQPSEDQSYACNYIVERSTGFSV
TVLDGKTGAGKTEVYCTAAEKLLQECADAQVLVLLPEIVLATQLMKRIYS
YFSTCNPVEWHSELTVKRRRENWLAVTRGTTSIVVGARSALFLPFKNLKM
IIVDEEHESSYKQDSGMIYNARDMAIVLGKHVDIPVVLCTATPSLETMNN
IQQKKYNHVVLKRRFGEAVMPDIIVADMRKDELKKAWMSTCLYEKICETL
AKQQQVMLFLNRRGYARLVLCKQCGHKVNCPNCCTWLTEHRVLRAMLCHY
CAYSCEIPRECPSCQEYNTMSPYGVGIERILEGIQELIPTARSVVLSSDI
SAKQANSIVEQVLQGEVDIIIGTQIIAKGHNFPKLTLVGVIDADLGLGNS
DLRATEKTYQLLHQVSGRSGRYKEKGQVVLQTYDPESAVIKSLLSSNRDD
FYSVELKTRKVAEMPPYMRLVSIIISGREEIGVIAVANEIVASMAGKITV
WGPAPAPLSLLNNMHRYRVLLKVTSISAIKSLLSECREKYKKLRNVRVVI
DVDPMNFI
>APH_0242 radC, DNA repair protein RadC
MPESRDAERKRQQLGHRERLRQKILNGNGDGVFDYEVLELLLCSVRGRVD
LKPVAKRLMERFGNLSQVLYADINELRKVKDMGDSSVAMLVCVREALIRV
MRGNITSCVMLDKWPKLIDYLKVKIGNSTIENFLVLYLNKRYSLIADEVQ
STGTVDETPLYIREVIRKALLCGAVYIVISHNHPSGDPKPSKADINVTNK
LRIACNSMDIELVDHVIVTSKRHYSFKTHGLL
>APH_1354 recA, recA protein
MKDSPSDKQRAVDAAIGQIERAFGRGSIMRLQNSPVEAVECVSTGSIALD
AALGVGGLPRGRIIEIFGPESSGKTTLALHVIAEAQKNGGACAFIDAEHA
LDTLYARKLGVSVGDLIVSQPDTGEQALHIVEHLVNSGAVDVIVVDSVAA
LTPRAEIEGDMGDQHMGLQARLLSHALRKLTSIVSKANCLLVFINQIRMK
IGVVYGNPEVTTGGSALKFYTSIRLDIRKVSALKEKENVTGHLARVKVVK
NKVAPPFKQAEFDIMYSEGISKVGEILDMGVRFGFIEKAGSYYSHEGIKL
GQGRETARSYLKNNADLSHKLEGLIRAKLLESMRSSDVFGSDGRAPSEEI
EESF
>APH_1298 recG, ATP-dependent DNA helicase RecG
MAIIHNSSSSPSNRVGKTAKLPEVPGMFSSIYDIQGVDNEKGLLLEKLCG
GSRIVDLLLYAPYSYVDRRNSQLTPLSRRGSVVTFLGVAKKHVPPYKRRK
SSKSPYKVQLGTEIGDIWLIFFNYSQPYLESVLEVGKQCLVSGKLEIHCG
EMQITHPDYCTNNLKKFTEICALEPVYSVTKGLHSRVIHKLIKVALKSIQ
AQHEWLPADLIEENSWLSWQESVYKMHTPENVEEVRRIKGRLAYDELMAY
HAAVYFARQHGRRKGVALEVKGTNYQEVLKRLGFELTAGQKSAIREITRA
QTSDQQMAKLLQGDVGSGKTVVALFAMLNTVESSGQVAVMVPTEMLAEQH
CSWIKKLLEGMDICIELLTGKTKNKNTIHARLLSGEIHILIGTHALFQES
VKFHNLRLVVIDEQQRFGVLQRMKLIEKGDSADILFITATPIPRTLEQIL
YGNMDRITLKDKPACRLPVKTSIVKVCMIDDLCKRLKNMISREHKIYWIC
PYIEGSEDNDVASVEERFEFLKNMFGNNIVGVSHGAMTQIGNESALQAFY
AGNIKVLVATSIIEVGINVPDATIIVIENPERFGLSQLHQLRGRVGRGHQ
QSYCILLHGPVSKIAYRKLSVLRDSHDGFHIAEQDLILRGGGDMLGCRQS
GIAAFKFADAQDFHAMVKAHAAVSDIVKNEDGRKLAYRLTQIFGHSLPHI
KY
>APH_1165 recJ, single-stranded-DNA-specific exonuclease RecJ
MLQSSAEEAVLCTGVSGAVWKVHNATYRDVLTIKQKFGLSEIVAHVLAIK
RIPLDDIRDFLFPTLKLLLPDPFHLLDMGKAVDRILKAIYEKERIVIFGD
YDVDGATSSAMLKRYFKSIGATAEVYIPDRLKEGYGPNPEALIKLRKKGC
SLCITVDCGTVAHEPISVARAAGLDVIVVDHHIGSPTLPDATAIINPNRL
DETSTYTYLSGVGTSFMLLIALNKTLRQAGYFQQENEPNLMNYLDLVALG
TVCDVMPMLKLNRAFVKQGLKVMSERGNMGLRTLADAIGIEEKPSVYHLG
FCIGPHINAGGRIGNSSLGARLLSSNDAIECNKIVTMLLDLNNERKEIEN
RSLAEALAQAELLVDEGKNIIMVTGNWHVGVIGIIAGRIKERFFLPTIVI
SLDGDMGKASARSVAGIDIGAAVLSAKFEKLIPEGGGHEMAAGFSVHRSQ
IEPLYKFFLERFKDVNIQKALHASGILSTAGISSALCRELQLLEPFGPGN
PEPKFVLRNVRIKNPAIIGESHIKCLIDDGSGASVRGMCFKCVGTELALG
LLQGGIAVHLLGKVSMNQWRGNEYVQFIIDDLAFA
>APH_0988 recR, recombination protein RecR
MDISRLISLFSKLPGLGPASSRRIVLHLLRHRHDVMTPLANGIRELEEST
KECEICFNLDVTSPCSICTDSRRDKSLLCIVEELGDLWAFEKGRIYQGMY
HVLGGVLSALSGVGPEDLNMSSIPERVRLHGVKEVIVATGSDMDGQVTCH
YIAQSIKSTGVKVTRLACGIPLGGEIDYLDEGTLRAALSSRYII
>APH_0109 rnhA, ribonuclease H1
MDSGQVVIYTDGACSGNPGPGGWGAVFLFSGGEERRISGGCSDTTNNRME
LSAVIEALGALDRQCNVCVRTDSVYVKNGITTWIHKWKSNGWQTASKSAV
KNVDLWMQLEALTLKHNVTWEWVKAHAGNRYNVEADALARAEVERQVMKR
>APH_1022 rnhB, ribonuclease HII
MPNFSYEDSFSHGSNAIVVGVDEVGYGSIAGPVVAAAVYIPDRNVECIPN
IKDSKLLTPKKRDALYKELLSHTVCGTGLASIDEIEEHNILVASHMAMRR
ALENLNLQRIDLVLVDGSRELKSQWPSKSIINGDELSISIAAASIVAKVT
RDNMMRELHDQYPEYHWNKNCGYGTAAHILALKQHGATPLHRKTFAPVKK
CIISTKNQDK
>APH_0167 ruvA, Holliday junction DNA helicase RuvA
MIGTLSGIIEEVQDTSIILAVGGVGYIVHVSYRTLINCKRGDSIKLYIET
YVNRDNVPQLYGFTDTEEQNCLKMLIKVSGINYRTALAILDRLTPDQLFS
AIVNEDKAALKVGGVGAKLINRIFTELTPLVQKLEFNIMDKRGPSVEDSD
ALSALLSLGYEKTRVLNALEKVGVSHNLSDTVRFALKELSK
>APH_0166 ruvB, holliday junction DNA helicase RuvB
MNELLHQHKAIPEDERNFALRPSLIEEFVGQSEIIENLKVFIKSAYERRA
TLDHVLLYGPPGLGKTTLAHIIAKELKVSLRSTSGPLLSKAGDLAAILTN
LQPMDVLFIDEIHRLHRNIEEILYSAMEDCCLDIVVGEGCGARTLRIDLP
AFTLVGATTRFGLISNPLRDRFGIPLHLEFYSVEELMLVIKRAAHVICTD
IDDSGAYEIASRSRGTPRIALRLFRRVRDFMVVERQSIIDNHFADSALFN
LGVDKSGLDKMDIKYLSFIYEAKNAVGIETIAAALSEDVGNIEETIEPYL
LKIGFIQRTPRGRILTTKAIEHLMNYKYI
>APH_0018 ruvC, crossover junction endodeoxyribonuclease RuvC
MLVFGLDPGLNYTGWAVVLKEPSGSLSLLDTGTICTTSCSDLNDKLFCIF
SGLSAIIQKFSVSVASIENVFVNLNPKASMFLCYARAASLLACLSSNVKI
FEYSPTKIKKCVFGNGRASKEQIAFVVRSSLGLSEDASFSSHASDAIAAA
LCHIFSSGNRYGI
>APH_0465 ssb, single-strand binding protein
MSSIGVNKVILIGYLGKDPDVRVMQNGKEMANFSLATSESWLDKASGSRT
EKTEWHNIVVFSEGLVKVVKTCARKGSKVYLEGSLRTRKWVDQNNNDRYT
TEVVLQGFNSTLCLLDPKGMSSGDAAASSIGAPPASSEEAGSFGGGVDFL
DPDVDEIPF
>APH_0597 topA, DNA topoisomerase I
MGVVIVESPSKAKTISKYLGKKFNVIASFGHIRDFPAKSGSVDPSNDFKM
IYEIIPKSEKHLDKIVKTVSAEKEAIYLATDPDREGEAIAWHIVEVLKEK
CAIAKDVTVNRMVFNEVTKRAVTAAVDNCRPINMDLVRAQQTRRVLDYLV
GFTLSPLLWRKLPGSRSAGRVQSVALRLLCEREYEVEQFKTQEYWDVGVD
LQNQGGEKFEAVLKCYAGEKLEKFSIGTEEQAKEYAETVKNQSYTVESVE
SKKTKRNPYPPFITSSLQQEASTKLGFSAKNTMMIAQKLYEGIDIGGEIV
GLITYMRTDGFYISEDAVNYIRDTIKMQFGEKYLSKSVRNYTKKVKNAQE
AHEAIRPTDITMLPEQLSKYLTDEQLKLYTLIWKRTLATQMESAVIDQVA
VDIKSSCGKISLHATGSTLSFDGYYRVYGSEDSDKRRMLPQLREGESCEL
LEVHPNQHFTQPPARYSEASLVKKMEEIGIGRPSTYATIISVLQERGYTQ
LEQKRFIPSERGRIVNAFLTNFFRKYVEYDFTANLEEELDLISNGKMVWK
EVLSQFWDKFISDVSSVKTIEASEILKAITRDLENYAFSSVDGESISRVC
PQCGSGELMLNIGKTSAFLGCNRYPECRYTRGIGGDGSASPADDASRILG
IDEETQEEIFLKRGPYGEYLQLGNSTKRVSLTKSAGEITVDLAKKMLSLP
LVLGCYPDTDKEIKLGIGRFGPYLFYNGVYFSIKDREDYINISHQEAVEI
IDKQSDKKAKLLGQNKDGKDIYVCKGRYGFYLKCDKTSVALKGRSEDITL
EDAILLLSQKQ
>APH_0537 uvrA, excinuclease ABC, A subunit
MAKGVISIRGARVHNLRNVDVDLPKNKLIVITGVSGSGKSSLAFDTLYAE
GQRRYVESLSSYTRQFVNLQAKPDVDSIEGLSPAISVSQKTAGKNPRSTV
STVTEIHDYLRLMFARVGVPYSPTTNRPIVKFTASRMVKEIANLPPGARV
YLLAPIAQDKHTEYVKEISNIRKQGYVRISIDGVVYDINEIPKLEHNKRY
DISVVVDRLVITGERSNRISSSVENALAVGHGVLCVKIVTLPGDYTDGEY
VEGQVLVFSEHFLCPDSGFNVGAIEPKLFSFNIVNSACQYCMGLGRSRAV
DVNMLVPNVELSIIEGAIDPIGPVKPACYSSYESTFVHKCCTEILAIAKK
FGIDIAQPWHRLDLKSRNLLMFGNEEGDLNAAKVGNFKGVVGYLSDTGNV
VAEKIAERYSVFRKCPHCAGFRLSPQALSVKIDGKHIGNVCAMTVSETIE
WCEGLPARLTDFEKQICSKLLDEIIRRLTFLSNVGLGYLTLDRESRTLSG
GESQRIKLASHVGSSLTGVLYVLDEPSIGLHQRDNALLIETLKNLRDLEN
TVVVIEHDEETMMHADHIVDVGPGAGVNGGQIVAQGSLEEILSNTDSITG
RFLSGKMDIPISDCNKTFSKWIKIRGAYKNNLKNVDVTIPIGGFTCVTGV
SGSGKSSLIGDILYPYALHKVYGVTPPPTECAGILGLENIDKVIEIDQSP
IGRTPASNPATYVGLFTHIRSWFAGLPLAKSRGYTMSRFSFNAKGGRCES
CKGDMYMKIEMHFLPDMYVTCEECNGLRYNRETLEVLYKGKSIADVLDMT
VDQALDFFSAIPLIREKLESLQSVGMGYIKIGQPSTTLSGGESQRIKMSK
ELSKRSTGNTLYILDEPTTGLHISDIQNLLQILHRLSDMGNTVVVIEHNL
HVIKTADYIIDIGPEGGTHGGEVVGVGSPHELVKNYPNSITAKYLAPYLK
SAKS
>APH_1367 uvrB, excinuclease ABC, B subunit
MRHFKITSEFDAAGDQPEAIRKLSEGIERGVREQVLLGVTGSGKTFTMAS
VIEKRQCPALIVAHNKTLAAQLYEEMRMFFPNNAVEYFVSYYDYYQPEAY
IPHSDVYIEKDALINEKIDMLRHSATRSILERRDVIVVASVSCIYGLGSP
ELYSEMTIPLSIGMQIDLCQLKEKLVELQYKSGSQCERGTFSVKGDIVTI
FPSHHEDHVWRISMFGDVIESIQEVDNNLGIAVANLEKVKVFPNSHYVTP
RPTLMQALSRIEEELQECVINYRKNNKIIEAERILERTKFDIEMMKETGT
CKGIENYSRYLCGKAAGEPPNTLLDYLPVDSLMFIDESHITIPQIRSMYN
GDRVRKANLITHGFRLPSALDNRPLTFEEWESRKTTLVYVSATPGKYETE
RTSGVVVEQLIRPTGLVDPICIVKKASGQIADVVNESQATISEGYRVLVT
ALTKKMAENLSEHMREIGIKVAYLHSDVKTLERMDIIAQLRTGEIDVLIG
VNLLREGLDIPECALVCILDADKEGFLRSETSLVQTIGRAARNMNGRVIL
YADRVTKSMKAAIDETNRRRAVQESYNKAHGITPKSISKSVATSLKDRIT
VKGTKGSKSKSAAVTEEDIIKLQKEMLLHAENLEFEKALEIRNQINKLSQ
HKT
>APH_0884 uvrC, excinuclease ABC, C subunit
MKNSNERLNDAFYALKKATCSVRKSVPGVYKMFGTEDRLLYVGKAKDLKK
RLSSYLSINRMSVNVYTMVKQIVRLEITVTENETEALLLEAKLIKSLKPK
YNIIMRDDKFYPYILFSKHKYPRIVLHREKRSEGRYTGLYGPFLSSVMTR
HIIATIKKAFLLRSCPDNFFATRARPCIEYEIKNCSAPCMQKITEEDYAK
AVQMAHKALTGQSKEIQCELFEMMCRFSNNQDYESAIVCRDRLHALKSMK
ECMGFQTGIHGDVDFIAVYKRQDLYCMQVVFFRDGVNYGSQPYFIESVGN
ASDADIVNMFMLQIYNDFPSVVYVDLPSDYDTNIMSTAIKQLMKREVDIR
LPATRDELKAMGLARNYAMEALNRRVRNTAQDTDLEEFATFFDLLKAPER
IEIYDNSHISGTHPYGVMVVCGKDGLLKKEYRKFKINTVTNGDDCSMMHE
VISRRFKEIPDVLPDFILIDGGRGQRSAVYGELSRLGIPFACIAKGPGRV
AGTEVFYFSNGEKLSLDPASKLMHFLCRLRDEAHRFAITSHRKSRDGKLQ
FSTLLNDIPGIGKTKGKAILAYFGSIQAMKHARVEEISKVPGISLKLAKR
VADYLKESQTTLRA
>APH_0200 xerC, tyrosine recombinase XerC
MQNGVRIVVAVTNLYDVVDAWVKCLEEEKRYSKHTVAAYLRDIRDFLQVV
YGLRQEKSVVLITEMENLPMTEFRRWITIRCNQGKQSVSNLRAISAIRNF
FRYLQRNHGIKNDVVFHIVNPIVRKGLPKVLEKSHVLKMVSENIHWTSRR
DAAIVALLYGCGLRISEAVGLRFGDLEADAVRVLGKGKKERIIPILPWVQ
KLLDGYVESCPFHGTGCGNKASYVFLGVRGKVLDRTYFAHRMQALRRNMG
LPESTTPHALRHSFATHLFLEGADIRVIQELLGHENLSTTQIYTHLDHKS
IIDNYMGFHPQTVKKNSSA
>APH_0040 xerD, tyrosine recombinase XerD
MGDDYIIRSFLEFLVSSKGVSENTVCSYKCDLEDLSQFLRRNGLKIVDAS
YGDLCEYIRNLNGRAYSAATVARRVSAIKGLCSFLYKDRIVHSDLSLSLE
SCRLGRTLPRVISESDIGMLLDIAKADLSAEGKRLYAIVNILYSSGVRIS
ELIHLGFFEIDAMLHEHVGDIGYIIIKGKGNRERLVLLNEVAMDSIRAYL
EVRKCFIAGENTESRWLFPGAKYDQCISRQRVGQLLKELAISAGIDPEKV
SPHKFRHSFATHLLNNGSNIVFIQKMLGHVNLSTTQVYTHVASEQLRDVL
SRFHPMSKSKN
>APH_1322 xseA, exodeoxyribonuclease VII, large subunit
MQVTLLRSFSNDIPEFTVTEITGVLQRFMQETFYSIKVRGEISGLSRPNS
GHVYFTLKDSNSVINAVCWNGTRLKVQFCDGLEVVCTGYLSVYQSKYQLI
VTDMTLAGYGKLAAMLAELKKKLELEGLFSPARKKKLPFLPTKIGVITSP
TGAVISDIISRVKQRFPSNVVVWPVQVQGDRASAMVIEAIKGFNSFADPP
HVIIVARGGGSFEDLWPFNDEELARTVAASKIPIVSAIGHETDFTIIDYA
ADLRASTPTAAVELVLPEKSKLVASINEKFVRTKISFERIVKMQEYRLLR
LHGILTEKKNSLLQKSRVALEYQQKIRYLLQVSLLRKRQYLESLMQRLSY
YDSKHILSVGYAIVRDEHEKQISSVEALSTNDTITIELKDGKRRAIII
>APH_0079 xseB, exodeoxyribonuclease VII, small subunit
MSIHISSKFEEAMKELENIVAELESGNVPLERSVELFNKGKELHKYCDKV
IKEISLHIESVDPDDKELSAKFSDD
>APH_0505 xth, exodeoxyribonuclease III
MIRVITWNVNSIRKRIEHLCSVLSEHSIDVAMLQEIKCTNEQFPFVELEA
LGYKCYVHGQKSRNGVAIISKLPVVEVVSYSVLDEGKELESAGSYSSEES
RYIECTLECTGNKKIRVVSVYVPNGQEVESETFFYKLKFLEHLKDRLLNI
MKTEDFLIAGGDFNVAPEEIDVHDPKALDGRLCFHILERAKFREILNNGI
VDIFRTFVGIDRKEFSWWNYREGGWQNNRGLRIDALLSSPQIADKVLDCS
ILSKVRGWDTPSDHAPVMGDIDV