Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View as list

# Salinibacter ruber DSM 13855, DSM 13855; M31

>SRU_1455 protein kinase domain
MPDAGDILDGYRLDAVIGRGGMGTVYRATDQALEKTVALKVIAPHLADDD
TFVRRFREEAKALARLDADGIVDVYTLRETEEALFFVMEHVEGPSLETVL
RRRGQLEPPQALSLLRQVLTAVGHAHASGVLHRDLKPSNILIDADGQAVI
TDFGLAKILASDADLTATHDQLGTVAYMSPEQVKGLQNVDAASDLFAVGL
LAYEVLTGRLPFDRSGSDFVVQRAIVDASFPPPSTHAPEVPPAVEQVVLD
LLSKDPAARPPDARAALDRLPAPEAADEEPLLTPDAPVSPDAGFTPWQWA
GLAAGTLLVLMGTYAGVRATLGLPVLSAAGPAPPETTRTAAAPAGPSAQE
QTSPPVADDAGLSSREEKGSPAEASPPADASPGDEAPSDEPPPSADASSE
DSPPPAASSDGTSRTASSAASAPDEPSPSSEPATGAVTVRSDPGGATVRL
NERPIGRTPLTIGDLKPGTYRLLLDRDDHRAREATVSVAGADTAVVSPTL
LPRPAVVRLGARPDGEVHIDGASRSPTADGLVVDSLSPGSHTVVFTSALG
RWEMEMTLDPGETYERTIDFTERVESAVTARAPDGTPLPNATVTVDDDTV
GYTPQRLTLQVGERTIRVAKEDHAPAERTVRVEPGMDTPLVFELAPEPD
>SRU_1876 hypothetical protein
MDSDSTRADVEERLRETADAMADRFDSLQDEVSTTGSSLRDWVVQNPLKS
VGGMLAAGVAVGALVGGGRSRRPEHAELLDQYIDALRTEVEEAMATGDTP
GEAVEKALRGRAPLVVYRGDGADASEASRSGGSVLGDTLGFVVRLVAREV
IRDQILSWLDDPDVEGLGDDLFE
>SRU_0640 IS605 family transposase orfA
MMPVNKEPYQWSRHAVHAVKYNFVWCLKRRAKVLKNEIANRLEQVLFDVA
DEHDWEIGSLAIRPDHVHLFVQADTRHAPYQVIHRFKEKSAHVLRKEFDQ
LHRLPSLWTRSYFVSTTGKVSEEIVGRYIEDQS
>SRU_1064 conserved hypothetical protein TIGR00250
MSTLSSEARVVGIDVGTKRVGVAVADPLRLFAQPHGTYAPDEALDVLQAL
RDADGIARIVVGWPLTEEGTAEEATEMVEAYVERIREALGTVEVAREDER
YTSEIAKDLLREAGVSQPGRYDKGRVDAAAAAVILQGFLNRTG
>SRU_2336 ISSru3, transposase insB
MAQKKGRESDSVAEGLRPAEEGDVLELDECWTYVRERANKRWLWVALCRR
TRQVVAFVIGDRSARTCARLWSRIPEEYRQGRSFSDFWKSYRPVFAGDPS
HRQVGKSSGEMAHVERFFGRLRQKLARYVRRTRAASESERMLHLTTKLFV
EWYNEAIT
>SRU_1299 hydrolase, TatD family
MIIDTHAHLYLDQFDEDRDAVLRRAWGAEVDVVVMPAIDVPSIQQAVDLC
EEYDGLYAMAALHPSETQEATEEDFEAVVNWCSHPSVVAVGESGLDYYWD
RSFDDRQKRFFRKHIRLAIEADLPLVIHNRDAAEDILAILEEEYVRAEVP
EKMRGILHCYVDPPRIAERAWNLGFYVGVGGIMTFSNSDVDQYVKEVPLE
HIVVETDSPYLAPEPNRGDRNEPAYVRHVAERLAEIKDLPLETVAEVTTQ
NARAIYELDDAG
>SRU_2023 ISSru3, transposase insA
MIKETYECRECGSSNIVKNGHSASGSQQYHCKDCGAHKVLDPEPRGYSEE
EKEKILRAYRERGSKRAISRIFGISRNTLTRWLKKRDENPIQ
>SRU_2764 Helicase conserved C-terminal domain protein
MTCTLGAVSVPGPSPRSPRRSICCLAAPLMSVSSVSAADLPGLDPAEDFS
FRDGQLAFLAKLARAYQEGRTDHLGVFVPGYGKTLTALASFAVARAMGVS
DTLVVFVPRSNLQEQYADADEMARMLRWIGAPRMPFCVADADRVFVKNPE
IPIVIATYQYACGESGNRDLQRYCNQGAPLFVLDEIHHLPEEGTWSQAVG
RLPYDSLIGLSGTPLRSDGQPLFGVPHDVVTGDDGREQLHYRALHEVSLR
DAHAEGQILKRIEAHVIDYNITMVEEDTGEEVEVSLGELKDEVGRDTSHL
DRYFARRSLRFHDVYLDTLLGPAVGRLQKKRAGQIGAEDGRNHQMLVTCM
SNRHAADVLDFMERRYGWLSATRIGQDVPRDEREERLEAYRQGEVDVMVQ
VDMIGEGTDIKTISVIAKLDLVSARSKTLQQIFRGMRYYDAWDEDANVCD
VFTSGDLGLSETLAWMTREVQEGLRRRTEEGTSPEKSEQTDDRSEWALTG
VNEGEIETHRLELEDNGRDSNLQVQRQPFEESGSDTLDLSAQEEELRQEC
SELATRVAYALQNRGMDVHMRDVHAKAKDRFRKAQSDMSLKLLKRKKKWL
KRCLRSKRLV
>SRU_1377 DNA-binding protein HU
MSMTKADLIDQIADGTGLTKIETRAVVEGFMTAVRGAMKEGRRIELREFG
VFEVQHRAPRTGRNPQTNEPVEIEDRYKPVFRPSDKLSEAVDAAHKADEE
>SRU_1505 Phage integrase, N-terminal SAM-like domain protein
MKLLDSFLRSLSSSQTRRAYRTDLQAFFSQAEDITADLVQAITHEDIRAF
VETMHDLDLAAGTQRRRLAALRSFFDWAMTERIYDRNPARHPDVKPMPPA
DASSSVRSLTKLEVRDTLEAAGASDETGLRDQAIILTTIHAALRRSEIAA
VAVEDVRPLGRYWILEVNPEGTGEEYVRIPDQVVSVIDNVKDQFGLTAGP
LWRSMSNRNRGEPLSADAIYTIVRRAGTAAGVGSITIDTLRRTGLRLAAD
GGASLSQIQAHGRFGNSAAAAQVHDPETTGGNLQDSAAVHIDFDVSEVLR
GV
>SRU_1888 hydrolase, NUDIX family protein
MPHLPPGSSLENDHTCTSIQTTRPAAAPESILSVPMATLACAPSVVQPPS
AMPGSVVRVVDVYPYRESAVNPEFLLLRRAPGTEYAGQWRMVGGKIESGE
AAWETAHREVTEETGHAPDRLWTLPSVNAFYEWQDDRVNLIPAFAAALPG
DPVLDDEHDAFAWLPAEEAAGRLAWPEQQRLLRLADQTLRAGIPPQLVVR
TPPE
>SRU_0781 MutT/nudix family protein
MPTVHLLARAVVREANHVLVVRAEGQPHTFLPGGHREPGEGLEGCLRREL
DEELGVRAEVGRYLGAVEHQWRREGERQYEINHCYATTSPALTADTPPQA
QEDYLSFAWAPVDQLDRVSLQPPPLRALLAGTDAADAAWWGSTVR
>SRU_0887 integron integrase subfamily
MSEPTAGRHARCPRPVAQTPRSGAADLPAPPVRLPHGKSVRPLGRTLRLL
PRHHPSPPPQRGRHSRLLRSPRVGAQRGRLHAEPGPQRPDRTNVRAEVVL
DRALIFLYEQVLEIELDDIGPLDRADRPKRLPTVLSREEVHRLFDAMSTG
PNRLIAHLLYGSGLRLSEALRLRVKELDVGTSRLHVRDGVGGVSLPDAIA
EKYPNAKTEWRWQYVFPPTTLSEDPRSGAARRHHRSDSAVQRAVKKAADA
TDIEKRATCHTLRHSFATHLLQDGTDVRTIQRLLGHEQLRTTMQYVHVLE
QSGDGVTSPLDTLPKDSA
>SRU_0188 IS110 family transposase
MEEPPRRSSTDEFTFALGIDVGKTALELALCNGEKIVARTTVSNDADGHD
TLVSWVEDRGGGPEKTCVCMEASGDFEKAIARRLYEEDYRVSVVNPRRIK
GYASSQLQRTKTDSADAALIARFGRREDPRPWEPPSAAESRLQELTRARQ
ALQKEKTRTQNRLDEAEDEAVRRAHQNLLDEIEQQIEDLEEEIEDHVEED
PKLKDRCSLLDTIPGIGLQTAAIVVSELGSPERFESARQAAAYAGLVPSH
HQSGTSVRGNPRMSKVGNGRLRRAMYFPAMTALRFNSAVKAFGNRLKERG
KEKMVVIGAAMRKLLHICYGVLKSGRPFDPSLHPGT
>SRU_1397 ISSru3, transposase insA
MIKETYECRECGSSNIVKNGHSASGSQQYHCKDCGAHKVLDPEPRGYSEE
EKEKILRAYRERGSKRAISRIFGISRNTLTRWLKKRDENPIQ
>SRU_0226 IS110 family transposase
MGARKTALELALRDGEEIVARTTVSNDPEGHSTLVSWLEDQGARPKKACV
CMEASGDFEKAIAQRLYEEDYRVSVVNPRRIKGYASSQLQRTKTDSADAA
LIARFGQREDPRPWKPPSASESRLQELTRARQALKKEKTRAQNRLDEAED
KAVRKAHENLLDEIERQIEDLEEEIEEHIEEDSELNDRCSLLETIPGVGL
QTAAIVVSELGAPEQFENARQAAAYAGLVPRHRESGTSVRGKPQMSKVGN
GRLRRAMYFPAMTALRFNSAAGAFGNRLKERGKEKMVVVGAAMRKLLHIC
YGVLKSGRPFDPSLHPGT
>SRU_0538 ATP-dependent DNA helicase pcrA
MRRIPIRRSTTHTQVDPDPEAEQRILDGLNDKQREAVTTTEGPVMIIAGP
GSGKTRALTHRIAYLLAAGKAQPRDILALTFTNKAANEMQERVEALVGDD
ARGMWVGTFHSSFARLLRMEGDKIGYSEDFSIYDTADSKRLIRQQMKGRN
LDTDVVKPRSVQRMISSAKNEMIDPQEYAELARGDQQEIVAEVYPAYERA
LKQANALDFDDLLLKPIELFEQHEDVLEKYQTRWQYVHIDEYQDTNQAQY
VLARKLSARHKNLCVVGDDAQSIYAFRGADITNILNFDNDYPDATTIRLE
RNYRSTENIIRLADSIIEENDDQIEKSLWTDNAEGEYVALMEALSEKDEA
QKIERRVRDLHLRDGMEYGDFAVLYRTNAQSRAIEEALRKENVPYRVIGG
TSFYERKEIKDVLAYLKLLVNPNDTASLQRVINYPTRGIGDKTQARLQRY
AQQHSLSLWQAVERVEEIETLGTRAERAVGKFRRLIARYASKAGTGSVPA
DELARDLIQDAGLLSELRKEHTRENLQRWENVQELISALAEYVESTEDAT
ISTFLQEVALMTDQDEAEEGDDKVTLMTLHAAKGTEFPVVFVAGLEEGLF
PLEQATQEKAELEEERRLFYVGVTRAEERLYLSWARSRYRYGEQTSNTRS
RFLEEVDSDVVRTEAGGELEQQTDRFSAEEGPSADYDEMDPHYYRQDLSG
DGGATGSSDGLRRIESTDGGGGRRVVYDEGHGEIVPGAQVEHQKFGRGKV
QSLEGEGDKATAVVFFGSDVGNKKLKLKYANLRVIG
>SRU_1105 transposase, degenerate
MDQHKEEHGLNRCLEAIDLPKSTYYYRKNRSDEPSEEEQELMDHIREIIG
EHPSYGYRRILPELEERTGQAVNHKRLRRLLSEHELGLARQVSGHSPSPV
QEILGDAAGNLNLVAGLDPGPLEAFSTDFTELSYAEGNRKAYLMAVARLE
SFCGSGLGGRAERESQARHALLEAGSRTDGEPGREARREDHSS
>SRU_0632 IS1 family transposase insA
MIKETHECRECGSSNIVKNGHSASGSQQYHCKDCGAHKVLDPEPRGYSEE
EKEKILRAYRERGSKRAISRIFGISRNTLNRWLEKRDAKSTQ
>SRU_0191 IS605 family transposase orfA
MPINKEPYRRGRHAVHAVKYHFVFCPKRRASVLKDEVANRLGKVLHEVAE
EHDWEINSLAIRPDHVHLFVQADTRHAPYQVIHRFKGTSAHVLRDEFDHL
HRLPSLWTRSYFVSTTGKAGEQVVQQYIEDQS
>SRU_1575 hypothetical protein
MSRSARSTRTAIGKSSSFSSNVCCPMPYYAPDDESWSAVADPPADPPHIA
VDGDGVAVRFVGPSDSFCLEGAPVRTASETIHTVALVAPSLNEGLVLCAL
RAEGQDLTVEDRRPGDARGRHADAFDQLQSALDEILVPVYIDDALEEVSE
SVDALVAVHTAQYAAPPTDDNTYFRTSVFQAGTLLLEEEQGAL
>SRU_0715 exonuclease, putative
MCGPGCPARKRHPVRLPLRREGWTRLAPSPPVKTEKEAGHGKKEARALQK
PPRSNAPINHPCSAMDVFLDTETTGSGPQDAVIELGVVAAQGEVLIHTLV
APLAPVTRGARRVHGITDEELADAPPFPTVADRLDTVLADAECVWTFGPT
YDRRMLLQTAALAECPETHRRIQDSTWRDLQPDATRVLGDAERVALTDAA
KRLDVSIPTEGHHHRALYDAKLARRVWTSVRRPASG
>SRU_1088 Phage integrase family protein
MASLTIQCRTERTESNGYAPVRLRISHSGKRKFVSLDLDVLASKWNDDRQ
RVTRSHPDSSRINARLSEVESVAQRAVSRLQSAGEVITASRIQQVVKEEL
FGEEEESGYDDFIAFAWDEVEAYRRRDQMTTFRHYRTGIRKFLGFLEDES
GQSQEDITLSFDALTVQLIREFRNHMYEVRGNAPNTVGKTLTQIKTMWNA
AVKEGHADRDPWPKITIDSAPSQKEKLDFEEIEALEEVDLPEEGSERRAL
DYFLFALYGGGMRFSDVATLKHKHLEGGRIQYKMKKTSEGAGVPIVDKAE
AILDRYDNRPQEPESRVFPILDGYDLDEMEDVQRAIESRNAYVNRQLKKV
RKKAEIETNLTFHLSRHSAAWKLYREMGDIYKVKRILGHSRVEVTEEYLR
GFPDTEMDEEYENVF
>SRU_0046 ATP-dependent RNA helicase
MAADISQSKYTNVIDLTSEAQQERRRDEVGSELREPDPPLDEVTVDELSG
HMEQAVHAAGWTELMDVQRKAIPYTLDGRDLIVQSQTGSGKTGAFLLPLF
DLVNPDKEEQQVLILTPTRELARQIHEEFEQMKIATPRTNRMEAVLIYGG
VGYQPQIDGLKNGAQVVIGTPGRILDHIKKDNFDASTLRMLVLDEADEML
SMGFYPDMKDIVEHVPGDRVSYMYSATMPPKVRSVAREFLDDPGFLSLST
DKVSVEENEYRYYLVNPMDKDRVMAQLLELEEPESALIFANTKREVSYLN
KFLSNKGYDIDEMSGDLSQRDREEALDRLREGKLRLLVATDVAARGIDVS
DLSHVFIYDVPQDHEYIIHRSGRTARAGEEGTTIVLSTHEDEYELKRMAN
TYDIELEKAELPADPHSEARELLQERYANAEAPANGEEPGVEDFVPLVKE
LSDEQPELLASIITELYAEAKTEDEEEK
>SRU_0652 MutS2 family protein
METYPDSLDEKLGFDVVRDRLAARVQSPLGEERLASMRPARTMDWLRGEL
GRVEELQGAFQYGDSVPLSPMYDLRDALRRAAPEDAYVDPEDLMATRRTL
VTLRRLKKHFEARREDYPRLADAVARATPLPDLEETIASILDEDASIRDD
ASPELRRLRQQIRSKEEELRTTLDKALRHAVREGHATGEQATLRGGRMVI
PVRASAKGKVEGFVHDRSASGQTVYIEPAACLELNNEVRELQSAEQAEIE
RILRRVTDHVRAESDAIEENLTVLAQFDLLRAKARFANRLGAVVPKLNDE
GHVEIYEGRNPVLQLHFERRDAGDATDGRASGEEEALPPREVVPLDLELG
ADFRTLVITGPNAGGKTVTMKTVGLFSLMLAYGLPLPVAPHSSFPLFDQI
VADIGDEQSIEDDLSTFSSHVSNLRHMLSAVGENALVLIDEAGTGTDPDE
GAALAQAVLEQLTEAGARTIATTHHGTLKTYAHEAEAVENGSMEFDQETL
RPTHRYQEGVPGSSYAFEIARRMGLSGDLLDRARTLAGTQKTAMENLITT
FERRTQELEDELYDARKAREKAEAEQQRYEEKTEKLEKERDAFRQQALEE
AERIVEEANARIENTIREIKEAQAESDATQEAREQLEDYKADLQARREEA
APEQDAAPAEADGASPAAAGGPINEGDQVVVDDGSTAVEVQEIEDGEARL
LMGSMHMRVSLDRLTRVGGPESAEPDEEDTGGNAEMAALEASPSIDVRGE
RVDEARRQVQHFLDDAVAANLDTVEILHGKGTGALRNALHEMLSGRPDVT
DHRKAPIEEGGAGVTKVDL
>SRU_0718 probable ATP-dependent DNA helicase
MIDREQLTDEQTRIVQHGRGPALVFAVAGAGKTTSLVHRIARLVTQGGVA
PGNILASSFSRATAQDLEAGLTELGLPDVNCRTLHSLGRQFLKWAEAEHH
WSRRLGDEDLNPSRLGPVLAGRALTRLARERDVDDHELDIDRGELEDQVS
AWKAQLCYPDLDEAALPPAAREEARQAEHDNEDFVTLYQYYEEERRREGW
VTFDDMLLEGWEALLRFDDLRARAQQAYEHVLIDEFQDISRVQYQMLDVL
TEPHRNYMAVGDDDQCIYEWRGANPSFILDFREEYEADEYLIRDTFRSQA
PHTVLANAVIAHNDHRREKHLNLTRGFGGSTQVHAADGADAEATHVAGAI
ESQLDTGRTLPEMVVLVRQYAQTPSLEQVFIDRDLPYRIVGNVPFYRRRP
VQVLLRHLFWGTLEATVRTAGWFDHRRNAQRYVDRFQKLMREPNRYVSTD
LITRLCREAVGDETSITDLLAASMGAMHDRTAERVERFLDTADQLVDRLD
EPAHRTVDWLIKALDYEDYLRRYSAFEELADRRIRTARSLIDFARGHPDV
ASVLRRIKEISVDRPDRGAQADVLEIRSIHRAKGREWPVVFVPGCNDGTI
PTSRDDSTMPPPDEDDSAGASDDSGSEDSDTDDAPAARREEERRLFYVAL
TRAQEQLHLSYDRTEPPSPFLAEADAEHRLALCDRVRPVFHRPADDWAAA
DVAWLCIGAGALRLRRYLTTWWDPTEAQRRALAAHLGREEALREAADAEI
AAYARDPGAEEKGAHDASSPMEEGSDASETNGHAGQTAEQDAGVPTEAPV
DEATAQQLRTAFEDGREVVEDALGLGPDEADPANAPAEKPEGVPEDDAVG
GTVAE
>SRU_0059 hypothetical protein
MPTDPLRRLGRLEEGGFRRLAARLALLRAYARRRDTEGLSDAQAQAAIAE
AFDQRTAAVDAWVYDVYESVTARTLRRWAQQFREEGLQGLIDKHGRRSER
SYESYFGAGSELRKVALHYLADHPDCTSTELLDELAQHVDDDALPTRRTV
QRFLRKMGG
>SRU_1995 putative DNA polymerase II
MSSPPAVNTPAPADATQSAADTALFGKDPMPRLVDVHPMMDRPSNEPARV
RVYQRSEDFASIHEQEDTFFPFFFLSDFSLLADRYRNGDVHTATPLNGDN
FYQYLLTFETWSDYWDALRQVEHRSDSDQQAPDELYRVGSPAQQYLMQTG
RSCLLGMTLDDLHRLQLDIEVYSEGSFPNADRPDDKVIIVALSDNRGWDE
VLHLRDGIGEEQLLQELVYVLQERDPDVIEGHNIFEFDLAYLLDRCALHG
VDFAIGRDGSVPRTYDSSMRFAERTVDYPAVDIVGRHVIDTYFQVMSFDV
FSRDLPDYSLKTAARYFDLAPEERTYIEGTEIAKAWRTDRATLLEYALDD
VIETKRLAGHLSGSTFYLAQMLPMTYGSSARRGPAGKIESLFVREYLRRR
HALPRSEWGSQSMGGYTDIFITGVLGPIVYADVESLYPSIMLNYDVQPSG
DTLDLFPQLLERLTDLRLKTKQDMKDAEEEEVRSELDARQSSYKVLINCF
DPETEVVTVDGIRHVEEIEVGDRVYSLNPDTGAVEIKPVTATQSQHYAGP
MVEIKNQHTDFLVTPNHRFLTQRFTSGEYTDLEWETAGDMLGDRIRRRLP
SLRSLPATQERPGPISLSAVCDRLAIEHKTGPRGIKELRRQARWQPEEYE
LTDWLRILGWFATEGTLYKSKARQYENGNVRGVSYQTTLCQKNDIGRSEI
ATLLNRTGITYSSDQNDHSFCSKVLYEILEAECGSDSFSKHLPPWIFQLG
PKDLKIVFDTLMQGDSAANGDRFTTSSNQLAEDFIRLAMHIGRRAFHMPN
DGSHRIQVNTVRGQRPTIKPKHRQQVDYDGMIHCLTVADNHTVLAGRNRK
FNWTGQSFYGLLGFGLSAFNDFEEADRVARTGQQILRQLIDEIRARGGTV
IEVDTDGVLFVPPEDVRGEQAEIDYTVSLTEAMPEGIRVGFDGRFKKMLS
YKKKNYALLTYDDELKFKGSSLISRSNEPFGRDFVRKAIRRLLDHDVAGL
HELYVDTRDKIVNSDWEGVERFARTETLKDTLEQYEADVEAGQRPRAATY
ELAKEKQNRTGKPVKKGDRITYYITGDDATVTAFKHCRRAEEWDPEDPDE
NTAYYLKRLDEFASKFEPFFDEADFRLVFSPEDLFGFSADGIEIQREEHA
SDYAEDQEDVPF
>SRU_0950 exonuclease, putative
MLHLERPLVFFDLEATGTDPQAARIIQIGMQRFVPSGDGAALDETIDVLV
DPQEEIPAAVTDLTGLSPDAVRQAPPLGAHLDRIAPLLADADLAGYNALA
YDIPLLQAEFERHGRTLPGPDDRVVLDPYRLEQVLRPRTLSALYERYTGD
ALDDAHDALSDVEAAGRVLQRQLADHDIDGTPADLAQQIRGDYLDDQRRL
KQDGDAVVVCFGKHDGKTLRDIQRDHPGYFDWMYETIDDLRPHIDEALE
>SRU_0712 ISSru3, transposase insA
MIKETYECRECGSSNIVKNGHSASGSQQYHCKDCGAHKVLDPEPRGYSEE
EKEKILRAYRERGSKRAISRIFGISRNTLTRWLKKRDENPIQ
>SRU_0026 putative replicative DNA helicase, intein-containing
MRGGTGEQQREQAQAVHEQSGRVPPQAVDVEKSVLGAMLIEREAIPQAIE
ILPSDAFYESKHQSIYGCIQDLFERGNPVDLVTLTEELRRRDKLEEIGGA
YYLTELTTQVASAANVEYHARIIAEKSLLRRMIETMTTVVQKAYDPGADA
FELLDEAESKIFQISDNQLRKAAAPMNEVVKDTLERLETIHGQDGGITGV
PSGFPKLDDLTSGWQDSDLIIIAARPSMGKCLGKGTPVMMYDGRTKPVEK
VEVGDRLMGDDGSPRTVQSLARGREQMYWVRQKRGMDYRVNESHILSLKK
SRREGARDRGSIADISVRDYLDQSDKWKDDNKGFKVAAEFPDQPVPLDPY
FLGLWLGDGKSDNARIYTTDEEVITGLQEIAEKRGDTISVSDEHRRCPAY
LVKSGDRGGAMATRESVQGALRALGVLGDKHIPHLYLGNSRGKRLRLLAG
LIDSDGHLNDGHGGTYEITQSSEQLARDIKFLCDTLGYRTSLTQKTARIS
STGYESEVHRVRFNGNVDEIPVRVERKKASPWTDVRDWRMTGIDVEPDGV
GDYFGFTLDGNGRFLLGDGTVTHNTAFALASAQNAATHPERSTGVAIFSL
EMGAQQLAQRMLTSEARVDAHRARTGRMKDDDWQRLARAAGALSDADIYI
DDTPGLSVLELRAKCRRLKAEHELGLVVVDYLQLMQASGANLRSGANREQ
EIAHISRSLKGLAKELDIPVIALSQLNRAVENRGGDKRPQLSDLRESGSI
EQDADVVSFIYRAERYGITVDEQGNSTEGIAEIIVGKQRNGPIGSVELAF
VDQYARFEPLTTQYDNPGGGPPQGDGSAPMPPDGNAGGGGGNSFEDDAPF
>SRU_0610 IS256 family transposase, truncated
MLDKTSTDYQDWMHKLLDRVLKTGSQTEAQAHLKETSEELELKAPSVFKA
LEEVLLDVTAVLALPEKYRKRPRTTNVVERLTQESRRREKVIRILSIKAS
AWRNVGALLAEKHEEWSTGRRCWTMEKFNEGRIKESERGTEELQSESPNP
TLERA
>SRU_1673 ATP-dependent DNA helicase, RecQ family
MADLTSHSVEEARRAMQRGWGHESFRPGQEAVLEPLLEGRNVLGVMPTGG
GKSLCYQLPAVLGDGFVLVVSPLIALMQDQVEALQAQGIAATFINSTLPG
YEVEQRWTNAEHGQYDLVYMAPERFATEVFQARAERLDVSLMAVDEAHCA
SEWGHHFRPDYLQIPDARAQLGTPPTVALTATATPAVREDILELLELPDA
VEVVRGFDRPNITWSVFRTDKKWERLRAVVDAVPGTGIVYVPTRRDAARW
RKRLDAHGVSVAAYHGGLDSEAREHRQQAWVDDDVRVMVATNAFGMGIDK
PDVRFVVHMAPPSSLESYYQEAGRAGRDGKQAHAVLLYQPTDADTQAALI
ESSHPTAEEVRAVYDAVCSVGQIPVGSEPDGPLAVRLDAVLKTTGFSRTK
VRTAVDLIDRQGAWTLLPRRKHFGLLRFSASAREVREYADTVGNRALAAF
VRTLLRAVHADAFRGWWPLDLRAVGRRADLSRDRLRAGLRYLEEQGVLRW
KPPGAALQVELAHPRASKLPVDDQTVQSARRRAETRLQYMLRYTRSVACR
RWALLTYFGEEADEQCDACDVCLGRHQPAAITPDDEPVLRRILEQVAAST
PRDEWFDDPPAPPRRIDELVDWLVEEDYLAVEDPLDGSVRLTERAENWL
>SRU_0109 ISSru3, transposase insB
MAQKKGRESDSVAEGLRPAEEGDVLELDECWTYVRERANKRWLWVALCRR
TRQVVAFVIGDRSARTCARLWSRIPEEYRQGRSFSDFWKSYRPVFAGDPS
HRQVGKSSGEMAHVERFFGRLRQKLARYVRRTRAASESERMLHLTTKLFV
EWYNEAIT
>SRU_2610 hypothetical protein
MTVKARQGQEQTAVSVGFSDTRVQAQVTANARQLQDAMQAQYGTDVDLSF
SGGDANESDQQASDGASSEGASALAPGDESTDADESSGASLRGRGRREWI
G
>SRU_0200 IS605 family transposase
MYLTRKLKLGRTDQLDALARRAGNLWSTVTKWHWRFVDRQGYWLSKGQAQ
KMYCKGFDGLHSQSAQAVADSFYDSLQSWRKKQKSGTYEGLRPPYKQKRH
FKVQWKSSAIKLRDDGVLRLSNGRGNDPVLIDWPSDMKPKRVEIGWDGDQ
YELRCQYKVEEDEEPKGTKTAGIDIGEIHLAAVYTGDESWTVNGRELRSL
RRQQNHAQARLDSEIDRKEYGSRRWKRLVRAKDQQLEKIRNQIKDLLHKQ
STRLIKTLHERRVGTVVVGNLTGIREGLDYGAKANQRLHQWAYSEFVQML
EYKARLHGMTVERVGEAYTSQECPSCGNRHKPHGRDYICGCGFEGHRDIV
GASNIRQKYLGQDKPKGSPLRVAGEMASPTGVRYRPHMRTEPTGSDPQRC
NPASSRKTSSERQECRPVG
>SRU_1545 DNA-3-methyladenine glycosylase
MEPLPASFFNRPTVSVARDLLGARLVHEAPTGTRLVGRIVETEAYTEDDP
ACHASHLSRDPETGEVVGQGRGQDLFAAPGTAYVYLIYGVHWLLNVVTEP
EGTAGAVLVRAVEPEEGLQDMRTERGVDRRVDLTNGPGKLAEAFGIDGEF
HQTRLTARPLFFADGDSVDDEQVARSSRIGISKGVERSWRWYVAANRFVS
PASPSG
>SRU_1484 type II DNA topoisomerase, B subunit
MPTTYTGEDIDVLEGLEPVRKRPGMYIGGTGRPGLHHILWEVVDNAVDEA
TNGYASRIEVVLHEDGESISVSDNGRGIPVDDHPEKGVPTVQLILTTLHS
GGKFDGSNYITSGGLHGVGVSVVNALSEELVATVKRDGQEYQQRFRQGTP
VTGLDTTKESARGTGTDIYFRPDPDIFESVEFDPSWIREHLDVKTYLNRD
LKIIFRDETSNERYELHHEGGIQEYLDYLVEDLQVSPIHDDVFMMEDDDL
DGDGRLEIALQWTDAPKEQLHTFVNGIPTEDGGTHEQGLKSGIRAVIRSF
MDTHDLVPHRLEIKGDDTREGLVGIVNLFHVDPQFQGQTKDKLNNPSVRS
QVSGALRTELEQYLNDHSSTGEAIASRVVQAAKARRARRSASGGSSGRSG
SKSRLQLPGKLADCSSSTPSECELFIVEGDSAGGSAKQARDRETQAVLPL
RGKVLNAEQATLDRVQNNKELSNIVQALGCGIGDALDLSDLRYRKVILLM
DADSDGHHIATLLLTFFYRYMRPLIEGGFVHIAQPPLYRIEAGKETHWAL
DEPDKEQILDEIRSDGRNPNVDIQRFKGLGEMMPDTLNETTLSPEGRRLL
EVSIPDTERMVTEQTITELMGRDSSARFKFIMQHAAEADELDV
>SRU_1822 conserved hypothetical protein TIGR00252
MATTNDIGDRGEEIAAAHLDGAGYEILARNYRHSRNEVDLVCRETDAGEY
VFVEVKTRSGTGFGAPEASITAKKRAALQHAARGYLHEHGAEGAPARFDV
VAVMLTGGPPEVQHYENAFWAD
>SRU_2183 putative 6-O-methylguanine DNA methyltransferase family protein
MSVSGPCLSCDTPGCTMQAHSDSDESFFERAWAVVAQIPVGRVTTYGDIA
AHLGRRGAARIVGWALKDAVGGDLPCHRVVNRNGVLTGRRHFETPHVMAE
RLRSEGVTFVAEDQVDLDAHRWRPGEAE
>SRU_2141 ISSru2, transposase insA
MIKETHECRECGSSNIIKNGHSASGSQQYHCKDCGAHKVLDPEPRGYSEE
EKEKILRAYRERGSKRAISRIFGISRNTLNRWLEKRDTKPTQ
>SRU_2238 hydrolase, NUDIX family protein
MQFPNQANRMPTGPQGMLPRVRGGITAERAAEFVSGAKQGPTAYVYVLPN
WPAVPYPRRNVHTALEGQGGGHGTMARSLCVVYMLLFASVSAPDASVSAV
AERGLSASNGGVRLWKTLGAVPDGTDPVLVVDPRALPAPSAETEAAVRVP
SVPPAALRNVAPYRPPAPVAAGGGYVGCPLPNDVVLLVIFRRGVWDLPKG
TQDPGESIEACARREVQEEVGIESLRVVRGLGTTQHGYPDGTRYAVKTTH
WYLMRTPERAFEPDRREGIRRVTRGRWAVARAHMGYDTLRQHMDRVEGTV
RAALGT
>SRU_0803 site-specific recombinase, phage integrase family
MRDHLQAFQDDYLEDKSDETVGTYRRSLNSFEKWFVQQNTFRFTEDGVRE
YKRYLMEDRDLSQVSVSTYLTALRRFCQYLTDVGELTENPATGVKGNRRP
ETHSRSVLTESDIEKLEAVVDDATQIDKRDHAIISLMLYAGLSEIEIVRA
DVEDLEHTLMGPVLRVQGKGREVKDQEAPLDPPVLEAVEAYLDTRDDVHP
EDPLFVSHGHRSKGKRLQTRSVRSRINGYLKEAGIKRKGVTPHSLTHTAA
LLWLNDGMPLEEVKERMRHGTLDTTMIYYKKQGLLKRDPEDLEELDV
>SRU_2704 ISSru3, transposase insB
MAQKKGRESDSVAEGLRPAEEGDVLELDECWTYVRERANKRWLWVALCRR
TRQVVAFVIGDRSARTCARLWSRIPEEYRQGRSFSDFWKSYRPVFAGDPS
HRQVGKSSGEMAHVERFFGRLRQKLARYVRRTRAASESERMLHLTTKLFV
EWYNEAIT
>SRU_0609 IS5 family transposase
MRQKRYDSDLTNSQWERLSRYFATDRKRSYSLRYHVLDAILYVVKTGTQW
RMLPGEFAQWQTVYYYFRRWREEGRILCILSIISRAARRRTGQHGEPSAL
IIDCQSVPSTRVGGISSFDAFKKVDGRKRHIAVDTQGLLWGLVVHAAGDH
ETQWALQLLAPVASRLDRVETVFADQAYQGLEEKLDRELGWKLQVVDSEE
ETPGFSIDPKRWIVERTYGWFGGWRRLDREYERRTDSSETMVCFAMLRIA
LNRLD
>SRU_2078 conserved hypothetical protein TIGR00095
MKLIAGRFGGHGLKTPSGHETRPSTARTREALFGLIDARIYLEGAEVLDL
FCGTGALGLEAISRGAELVTFVERKREVINYARENAEKIGVADKCIFIQG
DAVEYLRTYQGPALDLIMADPPYKLDAMKEMPDLAVPHLDTDGVFTLEHS
SHDWFDEHPRLMTSRSYGRTIVSLFRPPLPPEDEAAGDATDDVESAPESS
PTTS
>SRU_0108 ISSru3, transposase insA
MIKETYECRECGSSNIVKNGHSASGSQQYHCKDCGAHKVLDPEPRGYSEE
EKEKILRAYRERGSKRAISRIFGISRNTLTRWLKKRDENPIQ
>SRU_2330 deoxyribodipyrimidine photolyase, putative
MGPAPHDVRGRPPTDLAEWEEFWGIGGGREQYINCTQIDAFAPPMPPRTQ
IVWYKRDLRVGDHRPLAEAADRGPVLPLYVAEPSIAAGADYHPRHWTLIR
EALIELRARLAKRGQPLVVRCGEMPEVLESLRATAGPLRLWAHEETGNQR
THERDQRVRDWARAHEVPFTEVPSRGVVRGPHDRDEWADQWEASMDRPLV
HPPDALQPVDSVAPGPMPSHADLGLRPSTAALQQIGEAEAHRTLDSFLRE
RGRSYRRAMSRPGPAQTECSRISVHLAYGTISLRRVVYELRRRQEELRGA
NGPDAAARRKALSSFDSRLHWHSHFTQKLEDAPRIENESYIPAFDALRAD
DWDPALYDAWLHGRTGFPMVDACMRHLRATGWLNFRMRAMLCSFAAYDCW
LDWRRFAPTYGGLMADYVPGIHYPQVQMQSGTTGINRVRIYNPVKQGKEQ
DPDGTFIRRWVPELSHLDTTAYVHAPWKMSPIEQQAAGCVIGKDYPERVV
DHNDAYHHAQDAIHELRQRPEIQAQADTVLERHGSRA
>SRU_0731 ISSru3, transposase insB
MAQKKGRESDSVAEGLRPAEEGDVLELDECWTYVRERANKRWLWVALCRR
TRQVVAFVIGDRSARTCARLWSRIPEEYRQGRSFSDFWKSYRPVFAGDPS
HRQVGKSSGEMAHVERFFGRLRQKLARYVRRTRAASESERMLHLTTKLFV
EWYNEAIT
>SRU_0219 IS605 family transposase
MYLTRKLKLGRTDQLDALARRAGDLWSTVAKWHWRFVDRQGYWLSKGQSQ
TMHCKGYEGLHSQSAQAVADSFYDSLQSWRKKRDSGNYEGLRPPYKQKRY
FKIQWKSSAIKLRDDGVLRLSNGRGNDPALINWPSGQEPKRVEIGWDGDR
YELRCQQKVEEDGEPKGSKTAGIDVGEIHLAAVYTEDESWTVNGRELRSL
RRQQNRTKKKLDSKIDQKEYGSRKWKRLARAKDRQLRKTRNQIKDLLHKQ
STRLLKTLHERRVGTVVVGDLTGIRESIGYGSKANQKLHQWAYGEFARMI
EYKARLCGMTVERVGEAYTSQECPSCGNRHKPHGREYICGCGFEGHRDLV
GAANIRQKYLGQDEPEGSPLRVAGEGPKRSVMASPTGVRYRPHMRCNPAT
VGKTSTEPKGSCGQAGRPVGSGQRSPQENLPALAGGEVKASET
>SRU_2706 ISSru3, transposase insA
MIKETYECRECGSSNIVKNGHSASGSQQYHCKDCGAHKVLDPEPRGYSEE
EKEKILRAYRERGSKRAISRIFGISRNTLTRWLKKRDENPIQ
>SRU_0595 Phage integrase family protein
MWCGRNAPPRRIRRHTASKSASTAAKGGVRRACPGIVSITRPFDRTRYGS
QIPPMPAISIIARTRRKDDHGRVPIRLRISHRGEKRFIALPVKVLAKKWN
GDKRRVTGTHPDAGEINTFLSDLERAAFSVISRLERAGTLITAQRIKDEI
QEEREEVKSAPEDFLAFAREKVKGYKRRGQIGTFRSYRTTCRKFTAFIEE
TYGRDEVPFGALEAELFREFRTYCYEERGNSTNTVGRELGIMRTLVRHAM
KEGKLSAYPFEHITIDSEPSQKELLTPEEVERIADLEIDEESPAAEARRW
FLFAYYAGGMRFSDVATLQWQHIREGRSGRPRVCYKMKKTADTVGVPLIP
EAKEILCRYEEGDGEDWVFPISEGIDPGNEEALHRRKCQRNSAANRHLKE
LAGQAGIEKRVTFHLSRNAAAWKLYQNVGDIYKVSKFLGHSNVEQTQDYI
DGFVDESRDEDFIAAMT
>SRU_2267 ISSru2, transposase insA
MIKETHECRECGSSNIIKNGHSASGSQQYHCKDCGAHKVLDPEPRGYSEE
EKEKILRAYRERGSKRAISRIFGISRNTLNRWLEKRDTKPTQ
>SRU_0687 nuclease SbcCD, D subunit subfamily, putative
MFERLAGPAPLAPSFPTRSLDVVTLLHTADIHLGFKTHGRRDPDTGLNTR
LLDVRRSLEAVVQRALDADVDAFLFCGDAYHTADPTPTQQDIFVQCLRPL
ADADIPVVLIVGNHDHPVTFGRASSLDIFDHIAGAVHCYRKPASSVQVLD
TKSGPLQLIPLPWPIRSQILAKDEYRRMSPDELRQFVEEHYVTYVQRRAA
EIMEAETGITPEGTEHALSPDVPTVLAGHVTVQGAALSGSEHTTTIASEP
KFTVGQLAVRPIDYVALGHVHRPQNRNEEGHPPVVYSGSIERVTFNEADE
DKGVQLVDIDPARDPVTHTTFVETPARPFVAVSVDARDADDPTERVLAAI
QERDVADAIVRVRYRVREEQVAQVDPERLREALAAADTVAGIERTVDPAD
RKRRTAVTRESGLEEAVRQYVGQHDELSGLEEDLVEAALALEAGLEADEA
NPG
>SRU_2245 GIY-YIG catalytic domain, putative
MSPTPSTNEASAGGHYVYVIECRDGTYYTGYTTDVERRVEEHNEGTAAKY
TRGRRPVTLVHVETYDSQSAAMQREYAIKQLRRREKERLVQNGTETSDSA
>SRU_1534 hypothetical protein
MPPSSTPSSAGRPPRRSTFIGSGVSMSPIRLVPQRALPVLIGLLAVFTGP
LPTTAQTRPDTLHTDTTNLGPRLEPILDALSTTDRTATLAAEQLANLKAQ
PLALNRASVADLSMLPRLTSRDAHRIVQYRTDNGPFTAVEDLRAVDGIGP
AAVQSVRPFLQLEETASRSIFPPIRTITSNLRVRLTQRYTRRLDLGRGFR
EDRFLGPPGRLTTRLQLAHERRLQLALTLDKDPGEPLRWSPQTQTYGFDH
ITGSLALRDLGRLETLVLGDFTAQFGQGVALWQGLRFGKGRDPIAPAHKR
GRGVRPYHSASETSFFRGAAATIGLPGELSLTAFASRRRRDASVDSSSAG
GTGPLPVRTVSGGGQHRTPSELARKGTFGETTLGGALAYRRAGLHLGVTG
YRARFSRPLRPGDRPYRRFRVTGDGTSMLGGYGTVFLGDYTVFGDVARSP
RGSFGGLLGAALDGDYAEAVVVGRRYPPDFASFYGNAFGDGSRPQNEMGV
YTGLQLQLAPKWSVGAYLDQYRAPWLQFNVPRPSTGWEARVVLDYAPRPW
LSSYVQVRVQDEDEGTEYRRAGRSLEGLQRKRRYSTRWHTEYLFSDALTV
RTRLELSLHTTPDARSNGFFLSQGLRWSPHPTLTADVRIAFFDTDGFPAR
IYAYEHDLRYSFSAPVFFDRGRRAYALVRYEPFSSLALEAKYGVTRYDNR
TTIGSGLNQTEGSRRREVRLQVHWTP
>SRU_1109 ribonuclease H
MADIDDIDPNELDPNTIRFNGHELGVVTDLPGGVCRLVLKPVHQRYSTLT
KLVDKHGGTVIDIERTASEVEEEIIRLVGREQETTGGEIPEPSGGQRYEV
AGNTYPIRKALKQIGFRWDAEEEIWYTWDPEKWDQVFGPVIAIQQTNRRI
KIPKCITPSLIPSSTPEGRYRISTDGACISNPGPGGWAAVIVHDGEVRRI
MGRVDDTTNNRMELWAIGEALSEIPSDSEVEIRSDSRYAIKIASGEWNAS
ENRALVEAVRRQVDRHEVEWTKVEGHSGDPENEEADDLAEAAVRGFPEGR
SYCPDAI
>SRU_p0013 hypothetical protein
MQCFSSDWCNLRWSRWQNVSRATSTGRTPTTVPGAPGVYRIRSASLGQMV
YIGECSDLSKRILGTWARLNRRPARDFSSTKHAARRLAHLREAYGLEYEI
SFYAAHHEGRRDPRLDAAQWRKGLESRLLWEYRLEARMSSVANHRRSTVR
EGEQLAAEGSEVGFSEVGVPEVGFPYRIRPSSTPLPRPEQEPHSELWMGK
RWTSLAECKGRGQRINWSAAGKELRESGNGTPVLYKVLDPNTHELLQVGY
SRRGSGGALAAASRLAGEKAVAWAPLTGAGRQEHVLQELKDDLIGGYFYQ
MGKPPARQFAAEPSPSQ
>SRU_p0011 site-specific recombinase, phage integrase family, truncation
MARPDKLPRVLTEEETDRLLSEPNQRYFGPHRDYLYMRVMLKAGLRASEA
TALRPERIDLMSGKLMVREGKGAKDRTLWIGEELLEELQGWMDRRQEKAP
KADYLLPTSKGTQVATSHLRRSVKRYARDAGIEEVERVSPHTLRHTFATR
LYRSAGKIRLVQKALGHSDLSTTMIYTHVVDEELEGAMKGL
>SRU_1483 type II DNA topoisomerase, A subunit
MPVTETIPLHETARERYLNYALSVITSRALPDIRDGLKPVQRRILFAMFD
SLNLYPSKRHRKSATVVGETMGKYHPHGDKAIYDAMVRMAQSFSLRAPLV
DGHGNFGSLDGDSAAAMRYTEAKLQPLAMEMLEGLRDETVDYRDNFDGSL
EEPVVLPARVPNLLVNGASGIAVGMATNIPPHNLGEVVDAALHMIEEPEV
DTSTLVRDHIQGPDFPTGGRILNTQDELAEIYETGSGTIEMRGAYRTKGK
TRAIIESVPYGVDKSKIVEEIADHIAEENVPQLSNVRDESTDDVRIVLEL
KRGSDTEAAMAYLFKHTKLQKRFHVNLTCLVPTESTDVKAPKQVDLRTIL
RYFLDFRLDVVTRRLQNELAELEARIHILEGFETIFDALDEAIEIIRASK
NKADAAQRLMHRFQLDEEQTDAILETQLYKLSQMEIEAIRDELGEKRARA
EGIRRLLDDEDARWGIVKDELQDIRDEYTDERRSTLVGPGADMEYTEEDY
IVDEDVHVIVTRDGWVKRQGTYSDLDAIRTRDGDEVGWALAGSTRATVGF
FTNYGTCYTTRITEIPSTTGYGDPVQKLFSFDDGEHVVGVVSFDDRALPD
PVPAEPSEQGELFDPDDPDAPDQPYVVAISKGGQATRFTLDGYLEPSIST
GRKYMRLEDGDEVARVHLARGDENICLASHDGRALVFPVHQVSVYKGPAK
GVRAIRLEDNDRVLDFALSTRARDGLTVETNNGREEIVRTTKFDATNRGA
KGTLVIKRGYFAEVFPEPVEVPLHEAA
>SRU_2315 DNA helicase II
MPSRPADWPDLNPDQRAAVTASMDPQLVVAGPGTGKTRVLVCRAAHLIEH
EAVTPSRLVLVTFTRRAAQQLTSRLAALVGPEAQHVRAGTIHHFCYKTLR
AHSAPAGVPDDFIVVDDTVTDAFWQRWYEAHERWCEANDLHSYRQVKTHV
SRIKLGIDTVSGRLTEGLRAYGEMLGDRGALDFDDLLVKTRDLLRSHPDV
RADLVDETRAVLVDEFQDTDPVQFDIIRRLGEAGAHLYCVADDDQSVYRF
RGARPANLRRYIDRFDCSAERGTRHVLTTNYRSNRSIYAVAEAVLDADER
LKQRGDIRTSNAGTQPVQLVACDDPEAERTHVLRQLRDWLDDGAERSDLA
VLTRWNRRLAALERACLRAGLACETSQSEALLDTPPAQKLHALLRVVDAR
RRGRPLDAPMTELLSHLLPDDTMARLRDFGERSMPDATLWTAFQTVVSNE
QARRSAGLDSATDRLDQTYATITNLLQNTQEDGLTIGAFTRTALRQLGDP
LQLLRRYADTLTDPASRPSVRQAGTVLDEWRRAQARDARAGDPPRLLLHH
RTPQITRLWRQLVRRALDLETDPPAPLPEMQEALFARPADEGIPPLGADD
VVLTNDLEALLRWAERTGAFSGSTDTPQILLLAPDGALPSGQKTLLGVDP
ENVHVVDPESTFHSPSVRLVKLLQMTSGPSAPEPLFPEYVMVDLEATSTD
PRHCRVAEIGALKVRDGTVVDRFSELVQLPEDLTADERETLRTVCGLDPA
SDFDEARPEAAVWADFCAFVDGAPLVAHNGQRYDFRVLRRLANTHEADAH
WATTYDLLPAAHELFPDLRRYDAAHLRETLLDDDADTAHRALADCEDQQR
ILARMQEERARRRRRLAHEPLLPLLVAALTYESPAPEALSDDAQVFLQVG
HTWALRDASPAGDDLRSLLPRALPDRLRQHALYTLIDEEALLTASAGLQP
GLARRLAALFAPYADRPLRSKALADLLAHLALWGEETTPQGEDVITLSTY
HSAKGLEFERVVCMDVHDNAFPPYFARDPKERRESRRLLYVGMTRAERHL
VLTYPKRERGYDRRPTAFLDAAPDELLQVTDAAP
>SRU_2115 hydrolase, NUDIX family protein
MGTGTSSNAAMRPPRTVPSSAARPMSDLTEAQLSSEQLVDGALLKAFRDE
VRLPNGQTSVREWIDHPGASAIVPVFEDGRTLLVRQFRYPPRRAFLEVPA
GKIDEPGEAPADVAARELEEETGWQAGRFEHVGTAYPCIGYSNEQIHVFT
AHDLDRGTQALADGEFVEVVEVDFETALARARHGDLRDMKTVTALVYAAA
HLNESSAAP
>SRU_2484 ISSru3, transposase insA
MIKETYECRECGSSNIVKNGHSASGSQQYHCKDCGAHKVLDPEPRGYSEE
EKEKILRAYRERGSKRAISRIFGISRNTLTRWLKKRDENPIQ
>SRU_0919 putative deoxyribonuclease
MSTFADAPFTEDQEEAYDHVYDRLAQGERFTGLRGYAGTGKTYLVSRLVE
QLLDEDCTVTVCAPTHKAVQVLSDELGDAPVQMQTLHSFLGLRLQPKQDG
EYELVAEEERNFAEGVVIVDEASMIGREEWSHIQDAPFWVQWLFVGDPAQ
LPPVNEDPSPALDVPGPTLETIHRQAADNPILELATKIRTGADGRFGSTF
EDGKGVAVTRNREEFLDSILRAFDADAFAEDATHARVLAYRNKTVRRYNR
EIRAERYGADADRFVEGEWLVGTETWYYDGVQRLTNSEEVRVKKAQVETF
EADDQSEWTVWELKIRTPGRGLTRTIHVLHEEERERYENALERRRGKAED
DPSKWDRFFELRERFARVDYAYATTVHRAQGSTYDTVFVDHRDLRVCRGE
ERGALLYVAVTRPSRRLALLV
>SRU_1398 ISSru3, transposase insB
MAQKKGRESDSVAEGLRPAEEGDVLELDECWTYVRERANKRWLWVALCRR
TRQVVAFVIGDRSARTCARLWSRIPEEYRQGRSFSDFWKSYRPVFAGDPS
HRQVGKSSGEMAHVERFFGRLRQKLARYVRRTRAASESERMLHLTTKLFV
EWYNEAIT
>SRU_0196 IS605 family transposase
MYLTRKLKLGKTDQLDRLARRAGNLWSTVAKWHWRFVDRQGYWLSKGQAQ
KMHCKGVDGLHSQSAQAVADSFYDSLQSWRKKRDSGDYEGLRPPYKQKRY
FKVQWKSAAIRLRDDGVLRLSNGRGNDPVLIDWPSDTKPKRVEIGWDGSQ
YELRCQYEVEEDQEPKGTKTAGIDIGEIHLAAVYTGDDSWTFNGRELRSL
RRQQNRTAARLDSKIDRKEYGSRRWKRLVQAKDRQLGKIRSQIKDLLHKH
STRLVKTLHERRVGTVVVGDLTGIRNGLDYGSKANQRLHQWAYGEFVRMI
EYKARLHGMTVKRVGEAYTSQECPSCGNRHKPHGREYICSCGFEGHRDLV
GASNIRKKYLGQDSVRVAGEMASPTGVRYRPHMRCNPASSRKAACQWQGC
RPVG
>SRU_p0031 hypothetical protein
MPRRGVGKQRRRRLLKGTATIDRGRPPRRPPFNTLSCMTNTDDLIDLNAD
DGTALLYDLADIEGIGTTTARQIREGQPYDSKEDLLDARGVGPAAYDKVK
DHVYVDLSELDPTHEEALELADEVDDLWRLHDDHVRIADELESGYITQLV
EQKFGDEWAVTIIPTGLAGGRARYFDGDTEEDETRRYTGTEERARQLFSR
CADDINAGLVPDPLATRHQHTTEAADASTDYKTRGGWDRAKIMRRGHEIA
HSLDADRDYSDRLSEGLARAWDEAKADRRVDAEAGEWRCNDTDMVIHLHD
QEVDAEVDAEAEVPRRRLGEVGAVEEEGESWAVKMRERGGRTWTLYLYHD
KIVAGHPRRDAVAARGDAKRFIDTFDRMRRFEEARDGFNFMGVGMSLEYS
IDEFRRTFRDHYPQDWAKVKEAFNIENPSLTSTTEPDPRRLAGAGLGLFS
TPSTLK
>SRU_2179 6-O-methylguanine DNA methyltransferase, DNA binding domain subfamily
MGSINPPSSFYDSVWRVVAQIPVGRVTTYGDIAAHLGRRGAARIVGWALK
DAVGGDLPCHRVVNRNGVLTGRRHFETPHVMAERLRSEGVTFVAEDQVDL
DAHRWRPGKR
>SRU_2483 ISSru3, transposase insB
MAQKKGRESDSVAEGLRPAEEGDVLELDECWTYVRERANKRWLWVALCRR
TRQVVAFVIGDRSARTCARLWSRIPEEYRQGRSFSDFWKSYRPVFAGDPS
HRQVGKSSGEMAHVERFFGRLRQKLARYVRRTRAASESERMLHLTTKLFV
EWYNEAIT
>SRU_2455 ISSru3, transposase insA
MIKETYECRECGSSNIVKNGHSASGSQQYHCKDCGAHKVLDPEPRGYSEE
EKEKILRAYRERGSKRAISRIFGISRNTLTRWLKKRDENPIQ
>SRU_p0005 ISSru1, transposase orfB
MLTDRQGLPLGAVLSAGQRHEAAFFTDLMNEVSIPRPRGRPRKRPDAVAG
DRAYDADWIRRWLAERGIESAIPARKGLREGPGRPPTCDDQKYRDRNTVE
RCVGHMKERRRLVVRYEKKASHYKAMVLWAFIEEYLNR
>SRU_1127 IS5 family transposase
MARRRRYELTDEQFERIEEALPEVDGRGRPYEDHRKVVNGIFWVLRSGAP
WRDLPERYGSWKTVYDRFRRWAEDGTLQSIVEKLQGELDAEGHIDWEQFN
VDSTTIRASRSAAGGPTDDKKGTEPPEKTRE
>SRU_2772 IS110 family transposase
MEEAPSSSSNLAFSLGIDVGKEALEVALRGEEGAIARATVANDSDGHDEL
LRWLSGRGAGPEETSVCMEASGDFEKVIAQRLYEEDYRVSVVNPRRIKGY
ASSQLQRTKTDSADAALIARFGWRETPRPWEPPTAAESRLQELTRARQAL
KKEKTRTQNRLDEAEDEAVRRAHRGLLEEIERQIEDLEEEIEEHVEENPK
LERQCSLLETIPGVGLQTAAIVAGELGSPERFESARQAAAYAGLVPRHRK
SGTSVRGSPQMSKVGNGRLRRAMYFPAMTALRFNSAVKAFGERLKKRGKK
KMVVIGAAMRKLLHICYGVLKSGRPFDPSLHPGT
>SRU_0641 IS605 family transposase orfB
MRKTYKYRLYTCERNKHLVESIELASVVWNHFVALTRRYYEIYGEYPGYY
ALKKHLTKLKQRDKGHWYDLNSQALQNVIERLDQAYQRFFEIDSAGRPGF
KKREKYTSFTLTQTGWKLLGGNRVRIQNHNYKFVKSRPIKGEIKTVTIKR
DACGYLWICFSVEKEPPTPELPRTGNAVGLDFGLKDFLVTSDGDRIQAPE
PLQESLEEVQDLHKKLSRKERGSNNRKEAKRRLAKKYRQIDNQRKDFHFK
LARRLFSRYDVVCIEELNVGAMKELWGRKVSDLGFASFVKILEHVAQKEG
KEVRKIDRWFPSSQTCSDCSHRYEDLSLEERTWTCEECGSLHDRDLNAAR
NVLERALSSAEAGVRPSGAAARVARSS
>SRU_2552 hypothetical protein
MEIYCPECEWEPPSSATWTCECGHSWHTFDTHGRCPECGTVWRETQCHEC
RAWSPHHDWYHDLPPVDVDAVTEGQEAPSTEGGHHRSRLRSGARLRGPGA
PDRFPAVTTATARAPRRVLP
>SRU_2557 DNA polymerase III, subunits gamma and tau, putative
MDEQRYLVTARKYRPSLFTEVVAQEHVTETLKNAIRMERLAHAYLFSGPR
GVGKTTAARILAKAINCETPREEREDGAEPCCECDSCESFEAGRSLNVFE
MDAASNNKVDDIRELREKVRIPPQGDQKKVYILDEVHMLSKQAFNALLKT
LEEPPAHALFIFATTEPHKVLPTILSRCQRFDFRRIPVPEIVQRLREICE
TEGVEADEESLMLLARKGNGALRDALSAFDQALSLCGATLEYGELTQALG
VVDQDLYFRLTDHVAAQDTAGMIELVRHVVRSGYDLQEMLVGLAEHLRNL
LVAHSLGGEALEEVAESTRTRYADEAERFDEADLLRLLTMAADTEDDIKQ
SPQPRLTLETTLLKMAQLRRSADLRAVLEKIDRLEQMAEDGDLPEAVPGD
GVTASETASAPPAPPESEKSENTETGGAAGREASPDAAAEPRPGYGPEST
APPNAPEDAPSTKDAESDPKNETPDGAPADVVDEAGNETLSASDEDDAPN
DDAPNDEAPNDEAPDADAQGPDDGDEPPSSDAPADGTDASGADPSVGYND
IFGAPALGDDESSEGGSASGTTDARASESASTSDGSDASAAAVAEPAVAA
GADADGVATEWPQVVQSVKDTHISLGSLLGEAEPVEYVDGTLTVAVPRAL
HRDTLRDRRRVLLRHVTDTVAPTVDDLRFVVEDTSDAAAADADTSDEPLS
PREQLSQLRDTYPALDVLFSEFGAEPVW
>SRU_0857 putative DNA polymerase III, delta' subunit
MAWSSVLDQERVVQTLRRALTQERVAHAYLLHGPDGVGKRAVAYEMARAL
QCPEQADEACDACPTCRKTRRMVHPDVHVNLPHPWSQEKDRDEEDMGKRI
RRLGDNPYAAIDYVRRPSLADPSETSNQQVYYRIDQVRQDIIQPMSLARG
EGAYKVNVLIDAEKMREEAANTFLKLLEEPPPQTVFLLTTNRPEQLLPTI
LSRCQQLRFDPLLPETIEQALVDRENMAPDEASMLSRMADGSYSRALELA
ENDALMTSRELVLDYFRAAYTQKVESLDSCIQELKSQGRERVKSVLRLML
RWMRDLLLYRTMGEEAPLVNVDQKEAVARFCNNLPDADLEGMVTLVEEAM
ELAERNVRVALVLTALAQGLARAMRGQEVESLYVPLSEAERLAPA
>SRU_0247 hypothetical protein
MSEFHCSQNDKNFSRQDDALRQENSQEQSPAGIPIPATVEVVFLEALSGD
ALRVGLSVSEVSAPERSGAAVGRVPAVVYLWGIQAPRPGQPFGAAATEAA
GRICGGKRLHVAARRAGPEGRITGSVVAEETGSPGEDTTGKDTTGKGNAG
KGSSGNQDVGRALIRLGLAWQDQRGPSSAQLRSLEQEARREEVGLWQQEA
PTPPWAWRE
>SRU_2820 THUMP domain/methyltransferase domain protein
MPSPSLVTSLRSSDRTPLLFTVNMGLEDVVVDEFRERAAAAGLNVTNTDD
APFGLQSYALVEVDAAPDDALDVARRMRSVHHVLAPLYTFTLPADGEDAL
QTIHDTVTTLDVEAMETADTFRASSVRQGEHDFTSVDVQTRAGGALDARY
DASVDLEDYDVEVRVDVRDDQCLVSVQHTREALSRRQLEGYQPRAALKAN
VAYALLRLAHLDAPPNTLLDPFCGSSTILLEAADLWADTQCYGSDWNEEA
VSGARTNVDLAGLSDRIAIRKGDVWHLDETFADVTADLIVTNPPFGVRMA
SSMDFYPFYRRVLGQMGAVLRPGGLVVMLVLRQGPFNTVLDESEQFASRH
VRAIEIGGLYPYVFVLERL
>SRU_2456 ISSru3, transposase insB
MAQKKGRESDSVAEGLRPAEEGDVLELDECWTYVRERANKRWLWVALCRR
TRQVVAFVIGDRSARTCARLWSRIPEEYRQGRSFSDFWKSYRPVFAGDPS
HRQVGKSSGEMAHVERFFGRLRQKLARYVRRTRAASESERMLHLTTKLFV
EWYNEAIT
>SRU_0713 ISSru3, transposase insB
MAQKKGRESDSVAEGLRPAEEGDVLELDECWTYVRERANKRWLWVALCRR
TRQVVAFVIGDRSARTCARLWSRIPEEYRQGRSFSDFWKSYRPVFAGDPS
HRQVGKSSGEMAHVERFFGRLRQKLARYVRRTRAASESERMLHLTTKLFV
EWYNEAIT
>SRU_0351 putative DNA helicase
MQALDGGRIGTSTVSIALLDAETESARAYATRLTDLVELEREEEMRRHER
EIETLSGREREDRGRALLRMRGRDEGEGLGGHHVKLMREQKGQPLPDHEI
RVGDLVMISKTDPLRDDNPTGTVTQVTNYSITASFDPKPDGWVFGKGLRP
DRREEVVSGLRVDLYVNDIPYQRMQDALAKLPTADGALKQLRDVSTGVAS
PAATEPAPIDDWHNSALNDAQRRAVRKAVATDDVHLIHGPPGTGKTTTAT
EVLQQCVDRGESVLATAASNTAVDNVVAFLAEQGTDVVRLGHPARVNDRL
RTHTLDAQIEDTDTHRRSQQKREKAFAVLDRQEDLTAPSGRWRRGMSDRK
IKERAEQGRGSRGVPPERIEEMAAWLALQERADALFDEAEALEQEAIDEV
LGAADVVCSTNSTAGSDLLDGHTFDTLVIDEATQATAPSCWIPMTHARRA
VLVGDHKQLPPTIQNQEAARRGLRHTLFERLAHHHETAPEAPGSIRSLLR
RQYRMHETIMGFPNRTFYDGRLEADDTARHRTLADLGVPEHALPADERRA
ILDPEASLVFVDTSGIDAPEHQRSGSHSRENPREADLIAQLTTALLEAGV
APSAIAVISPYDDQVDRIDRALAPDGPETDTVDGFQGREKEIVLLSLVHS
NDRGAIGFLDEPRRFNVAVTRAERKAVVVGDASTVAAADVLGAFVRYAET
TGRAVPL
>SRU_1868 exonuclease SbcC, putative
MVPVRLELKNFLSYGTEAPPLEFDHFDVACLSGGNGEGKSALLDAMTWAV
WGAARKSSGRRKPDEELIRIGTRHMRVAFTFDLEDTRYRVVRSFSRSETG
KTTSSDLEFQLRDAAGEGYRPLTGATQRETQARIEDTLGLDYDTFINSAF
LLQGRSDEFTQKRPSQRKEILTRILNLGRYEALEDEARDHWREAKERQQR
AAAEVERLEAALEDVPDWEAERAAVQADIKAQTEALSDLRDREKALTQKR
ANLEATAREAESIRESMASLDDRIEEHRDEIEALTARIEEAEALLEDRTA
IEEAYDEHQSLVAERDALEDTRERHRTLRQKLDDMSSSLQERRNDVERRL
ERLRAERAGIEESLDDCRETLAQRAEVETRLRRAQAARQQVPERKRVRRR
RDRLEQRKAEAREAIVGARQQLRGEIETLRAQIEEEAEALERREQIEARI
DALRSKQETRAALDERMAEIEDDGTARSQAVQEQAGQLEALRDEREREVE
ELRRFREADGDVCPTCGTELTDAHREEAEATLRSHIDELDTAIESARAQL
DEEKERRAELRRTYRQLQDKREALDDVGEALATAQEQKRALEETAEALAA
HREKAERLDQRLTEGRYAESARRQWQACKQRLAETEVDAEAFEALQNRAA
QFDRYADRLGEIERAAARREELAQKRDERDEKIEQLRTALDENRVAEDVQ
EDMEDLQAKIDALEFDPDRFQEIRERLQALSDVPDRHNALVNAQENRTEW
TEQRARIQERIEDAEGEKKELEERLAECESALEDKPEVVAEQEDVSEQVE
AEEETLTDLQQRLGKLDAQLEQAAADQEALEAAREERQDAAADRQRYKHL
RAAFGKNGIPSLIIEETLPDIEERANRILDRLTDGRMHVRLDTLKEKKSG
GTKETLEIIITDEHGAPRPYETYSGGESFRVNFALRVALAQLLAERSGVR
VRTLVIDEGFGTQDEAGIERLVEAIQAIREDFAKILVITHLERLKRAFPV
RIEVEKDPSVGSTFELVGA
>SRU_0732 ISSru3, transposase insA
MIKETYECRECGSSNIVKNGHSASGSQQYHCKDCGAHKVLDPEPRGYSEE
EKEKILRAYRERGSKRAISRIFGISRNTLTRWLKKRDENPIQ
>SRU_0305 protein umuC
MDSVIALIDCQAFYVSCERVFDPALRGRPTVVLSNNDGCIIARSASVKAA
GVPMGAPVFKWRDELEAMDAAVLSSNYALYADLSRRVTAVLETMSIDLER
YSIDECFVTLPALDRDALRALGERIRRRVRDWVGIPVRVAIGPTKSLAKI
ADEKAKADKRAGDGTGVYVCPPEPDLDVLLYRTDVGDVWGIGPSYEETLR
EHGVTTAAEFRALPDPWIRSTMTVVGLRLARELRGQRCLDLDLVGPDRQS
LVRSRSFGAPVEAKAELRQALAKHAQRAAEKLREEDLVARGISAFITTKT
HGPPPHYADEAQATLDEHTAAAPPFVRSSRRLLDAIYRAGPAYRKAGVML
YAIRPRRPHQGSLFGRPVQDDEALMQAVDRINGTMGRGTIGVAAAGLPGD
RDWTMTRDNTSQHYTTRWDELPVARA
>SRU_2335 ISSru3, transposase insA
MIKETYECRECGSSNIVKNGHSASGSQQYHCKDCGAHKVLDPEPRGYSEE
EKEKILRAYRERGSKRAISRIFGISRNTLTRWLKKRDENPIQ
>SRU_1220 Protein of unknown function (DUF1232) family
MQTGFGVDRKNDREAGREHSFTHPVNSPRVSHIAPPDMADGQPTPSPAPQ
GDPSENSPSASVFARLRERIQGVRDTRLADRLAQIDAEFVRENARRITEA
DLDTVVDRAEAIEARFRNDGGIRRLLDEGRLLLGLVRDVRAGRYRCLPVW
TLSAVGFALLYVLNPFDLVPDALPVVGLLDDAAVVSVCLSLVEQDLQDYQ
AWRRASRNEEDPTDRGASGPDLISS
>SRU_1808 protein parB
MAVHTRIPIAVGSGGRRSVSAWAWRGVLAGLALLLWGPLLARGQSYVGKG
HRVLDGDTIYLLRETGQIVRVELYGIDAPERGQPFADAAARAVRRVVFRT
DVRARAETDGPDGRSLFVVRMDDRVLNEHLLRRGLAWWDRRQAPHADRYR
RLEQRARANERGLWAQPDPVPPWTWRGRDHR
>SRU_0027 uracil-DNA glycosylase, family 4
MHDLLRELRAIVEHERALHGDLLPVPPAEDATEAAPSPSPDAPPTETDTP
SHAAPDDAGSDPDMPNYDLFGNQVDPAEDPSLPPPERIEALIPDDAPYKD
ADTLEEVEQYFADNVLVPIDEDRENPVFGVGDPEADLVIIGEAPGRNEDE
EGEPFVGRAGQLLDKILDAINFEREDVYITNILKSRPPRNRNPKSEEIDA
HLPVLYKQIALLRPKIILTVGKVAGNTLLDRSSSLSNLRDQEHDFYGIPL
MATYHPAALLRNSQWKRPTWEDVKLLRTRYDQLTNEG
>SRU_1974 hydrolase, NUDIX family protein
MPFFCLPRSFDTLHSLMAFSLSRLVPRLAERLGGPLPGHEAHLRMAPQNP
SRRADLSVEARDCRDAGVLLLLHPDEADPSVVLTVRRDHLPDHAGQISFP
GGRRERGESLSDTALREAEEEINLPPASVDVLGALTPLFIPPSNFCVHPF
VGHTPSPASLRPTDAEVGRILQVPLARLLDPAARTTETRPLNGRDVDVPY
YDVAGHTVWGATAMMLAEFLAVVRDATASAE
>SRU_2442 hypothetical protein
MTDPLGGFFAFGPPGTGKTWLLEVLGDILDMETFFKQVSPGSREEDLILD
LLPDENAESGIKKQWGELPKAVRASHEGNTLLILDEWDKTRPTADAFLLD
FLQNGRVNYGDIQVQANMDNLYVCITLNDERDLSGPAHRRMPYLHFEPLH
PSLVREALRRSHGGHPYLEAAVNLYVRCELSMMEKSCTIQELQQLLDAIS
VLGPDDADWDQLVLDYVTKDRDNHRLLKKAEDVDTSDWEDAGWTEGHDAD
PLDPSAYAPVDLPNQAPASNGEGDEGARLPPMADVKGYTPPQNDETPDLE
AAFAALEGTDSVYDALTRQESPAEAPDRFGRVQVQGDTITFDAPVPLMEH
DGYAAELWGHPGEVVFVEEAATRADLRLLQQERGLEFISYADEEIIGRYE
GLHLRWTPDMGAEIIVPTARRDTFDDLFRGTWLNEADIAGPADLPTPVLA
RLGTQQAGVVEARHADEPVADPYFAGVFDYWTQSEQDTVETAEVSGYDAF
MDHAEAHADPLILEGDAVYALFDGLLMGLVGDENDYLVVSVTGPFDPALE
SYLQHWLPNAKLSLRRKAAVQVPAKTLVQDHGFGVVRPSDDRPSPGKKLV
RIEDGVKSIYRDGHLTVGTQMSGRQITAHRAELLIGNIDQTLDEFTG
>SRU_1916 OB-fold nucleic acid binding domain protein
MFFPDVMACLPRWVFLAALSLLLVGAWPEAVQAQDPITINEARDEPLGTE
VTVEGTVTRAYGSYARVQDDSGPTGASAIVLRQTSGSNSSAFQSDIADGT
IQPGTTVKVTGTTSAFNGLFQINNEDLTDYTVQGQGSPPSPQTVTLPELA
QNGEDYESELLRVEGLRFLSASGAFENGTTYTVEDGDGQPLEFRVQDGSE
TAIGGAPIPGGVFDFEGVLGQFNGEGPGGDEPDEGYQFIPVRESDLQPSL
SFSFNRLFAQAEEGDGPVSVQVQVFNKETDRTVSVTAEVGPSSTADGTDV
MGFQSPQTLTFSGTDPSPQTLTLEPVDDSEQEGVERLEVALSSEDGGISS
PSRFTLWILDGPAAQGPIVAGDSANVLLDSLRQRYGDPPTIGYGPARDTL
YRRVYNEQDTVEAIYSGLQVVVDPDGGDASDQALDQGVNTEHIWPRSKGA
ENEPALSDMHILAPAHDAVNSARSNYAFGEIPDSDTDSWYFEDESRSTTP
QNGLELWSELDSSPAERDNRRFEPRHSKKGDVARAAFYFAMAYPNRADLS
FLETQRETLLEWHEEDPVDATELRRTLSQGSYQGNIPNPFVLDSTLADRA
YGEEVPGPEVISIQNAREQGGGRTVSVEGVVTRVGDDGPYIQDQTGGLYI
FESQGVFGQALGSSIEKGTRLEVTGTLTYFNGLLELTDVPDDGFEIIAQD
ESLPAPTTLTLGDIAASGENHEAELVRVENVSIDADGDDTFRAGSSAGNY
MIQDGTGSLTLRIPSGSELEGEPIPDRATFQGVLGQFNGAGPDADEPDEG
YQLLGLDAGDLTAELPGETTVDVTRSFGDPSTGDSYRLVALPGQVDQALA
STLSGEAGVGWQAYWDDGSDQEPFIKFDGSDQFDFRPGRGFWVLSTSDWS
VQTTIPTVDVQNGATTIPLHDGWNIISNPLPRNVPWSAVQSANEGTLQAL
WDWDSGSFREASTFVSAAEGEAFYVLNDQGLDQLTIPLSSSEGTTANAAN
ESRTTRAVELVAERKGRATARVEVGEHPAAADGKDAQDLAAPPSRFASLS
LSARAPFAGAAPERQGRLARDVRPTGTGGQTYTLELRADTTGPVTLRAES
LPQSPQVDVALVDPANGRSHDLRTDGPLTLAAGPDPSRIQLLVGRSSYVT
SETRERLPESLTVQAPAPNPFRNQITLKYALPETQDVTVAVFDLLGRRVR
TLAEGRQEAGPHRVNWEGTDASQRRLASGTYFLRVSTDEKQHVEKVVLVR
>SRU_2395 IS605 family transposase
MYLTRKLKLGQTDQLDRLARQAGELWSTLTKWHWRFARRQGYWLSKGQAQ
KMYCKGFDGLHSQSAQAVADSFYDSLQSWRKKRKNGDYEGLRPPYKQKRY
FKVQWKSGAIKLRDDGVLRLSNGRGNNPVLIDWPSEKEPKRVEIGWDGDQ
YELRCQYNVEEDQEPKGTKKAGVDLGERHLATVYVENGENISVHGGRLRS
LRRQHNRMLSTLRSKIDRKEKGSRRWKRLARAKDRQLRKIRNQIEDFLHK
VTTRLVNVLHERRTGTVVVGDLTGIRERIKYGDRMNQRLHQWAYSKFEHM
LTYKAQLRGMTVERASEAYTSQTCPSCEHRHKSNGRDFNCPQCSFEGHRD
VVGARNILNERYPGDEPTGSTQVAGEMASPTGVRYRPHMRTEPTGSEPQR
CNPATAGKTCTEPRGSSRQAGRPVG
>SRU_0988 ATPase, AAA family protein
MPDLFDEQAEQARQERAPLADRMRPRTLDEFVGQEHFIGEGKLLRRAIEA
DRVTSVLFCGPPGTGKTTLARIIARTTEAHFTSLNAVLSGVTDLREAIQK
AKNRLKHHQTRTILFIDEVHRFNTAQQDALLPHVEDGTVTFIGATTENPY
FEVNDALVSRSRVFELEPLEEEHLRQVAAMALTDAERGYGDRDVEITEEA
LDHLIGTANGDARSVLNALELAVETTAPDAEGTVYIDLDVAEDSIQQRAV
LYDKEGDAHFDTISAFIKSLRGSDPDAALYWLARMLYAGEEPRFILRRML
IFAAEDVGLADPQALQVAQSAAEGFDYVGMPEGQFLIAECCLYLATAPKS
NSTFAYFDALDHVREEQTDDIPQHLKDPSRDQDGLGHGEGYKYPHAYREH
YTPQQYLPNEMQGTYFYDPSGEGYEEQVANRLAQWRERDFDEDVVKRAHQ
YADDEA
>SRU_0071 integrase/recombinase
MTRSARNWRFVVRAAKSGSSSDEAFRSIIGRRSLWTSLIACNYIRALNIS
THSFRNPVDPTQLGEQDCSYVKQVRLTEYRLPLGILDIGNLIFKPYVVSE
PTAGRHARCPRPVAQTPRSGAADLPAPPVRLPHGKSVRPLGRTLRLLPRH
HPSPPPQRGRHSRLLRSPRVGAQRGRLHAEPGPQRPDRTNVRAEVVLDRA
LIFLYEQVLEIELDDIGPLDRADRPKRLPTVLSREEVRQLFAALSPGPNR
LTAHLLYGSGLRLSEALRLRVKELDVGTSRLHVWDGKGGTDRTTVLPERL
HGPLRRHLKTVKAQHEADCADGVGGVYLPDAIAEKYPTAKTEWRWQYVFP
STTLSEDPRSGAVRRHHRSDSAVQRAVKKAADATDIEKRATCHTLRHSFA
THRLQDGTDVRTIQKLLAHEQLRTTMQYVHVLEQSDDGVTSPLDTLPEDP
T
>SRU_0626 Phage integrase, N-terminal SAM-like domain protein
MRSLWVFYRTAPDTIVFFDDSPTARFSTVVAFYNHRTGGPMSFAQRDPIG
ELSLLTHIFIKYREPYVTDGQCRVIVQSKRPIMSSIEQYSQKPFYAHKGT
DESSQDTETTEDIVVKEGKHFWIEFDPPEEPFTDTSRRVLRLVRNVEQHR
QPGYCTFSKSLFVERNGNDIFKPYRLYPTHNFEDKYFSSAEVKESASLYD
LSSLKKNEIRPTLERYEEALKAEVLTPLRNALIPCMVEVYRREIGFESEP
DKSLRNASYSSVLSWGSTLRFTLRLWDRIVSGQPLAQVKSEDWFEGTFEK
VPSAVSQGARSAIRYYVSDKKLSRDYVLAQALPVYFKWAACREAIQSKLH
EQKTDFFAVDTELDKTHVLSGDNVPAKIKKLLEEAAARRKDALSENTIQA
YQHAIDHFKSFCERHGPKALPASPETLIAYFEHLAQNGYAESTIRKRRSA
IRFLHERSMNESPTTSESVRRYFDDLRKTIPESRGHGQKDPILFHHLHQM
SFDEEELSDLRDRAILYIGVATGLRDSGLIGLEMRDIFEKEGGVVYRIRD
PKGEGDPGPERVSVPHEVPALTPSPNEALTAWIEAAGIESGAVFRSVDQY
GNVGGDDGLSSGSISKDIVKPWMKSIGEDPSEYSCHSLRAGFVTQAILDG
ITEPRIAAQSRHKSIEALREYERPTNDMKNHMLKEMG
>SRU_2013 ISSru2, transposase insA
MIKETHECRECGSSNIIKNGHSASGSQQYHCKDCGAHKVLDPEPRGYSEE
EKEKILRAYRERGSKRAISRIFGISRNTLNRWLEKRDTKPTQ
>SRU_1806 probable ATP-dependent DNA helicase
MPTLSAFEPDTNFFVRAAAGSGKTTALVARMVALVRSGVPVEDLTAITFT
RKAAGEMSKRFYEELRRAQTALPAEGPQRRRVTAALRDAQQAFIGTIHAF
CARLLRERPIAADLPPGFVAGLEDREERELRDRAWQDYLQTVRADRPARM
EALTSLGLEPEDLDAYFERLCEHPELDPYVNAPDTVPDLTQAAAAVRAEL
DAWQARRPDALPEGRDDAMQAFDRAEKLIAQTGVETPAQRAELLELFAGV
ADEESADVTLKCWRGPHTDAYDWARTLRDEHLPALVRDVVQPALRRWRAY
VHEEVVAFVRPAVERFASLRQAEGRLTFHDLLACTRDLLRDHPGLRTTIQ
ERHPRLLVDEFQDTDPLQAELLFYLTSRNPTETTWTDCRPLPGSLFIVGD
DKQSIYRFRRADMEVFEAVGERIEDTGGEAVMLTKNFRSLDVICDWCDAA
FGALFDDADLMDRQATYTPFDPQRTTERDVDGVRRINLDKVRGNWGTDIA
AQDAGRIARFIQGARDGGRSGRGADRHGALFAGGADYSDFLILTRTKSRL
SVYAEALAERGIPYTVTGSEDLGEAAELKALVDLLTCALRPDDEVACVAY
LKGPLVGASDDDLYRFSRAGGEFGRMHEPVPASVLEALPHETAQRFEEAF
GHLRAARRRLHEQRPGVAIEQLIDDLGLLAGAAHPPDAAEGSLRAGRVLR
TITYVQDLAAQGLGWAEVLDELQRVVDGEEEVDGMTLETGGDDAVRVMNV
HQAKGLEAPVVFLADPYSRSGGPSVRRHLRREAGELVAPIVQGSGYRERV
THPPLGWERPVDGRDESFRESEERHEAAEERRLLYVAATRAQNLLVVSTY
PEKPDDGPWAPLYPHLDAADVPELGRPDAEPSSDRPEAPAPALTDQRAGR
DAQLEAQSRPSYRTESVTDGDRASPVRSSLASEGYGEAFGSAIHQLLEQC
VRTGRPTPWTDESVAASVLERTGAEDTPDAVERATTMVQRFLDSRVWGRV
QGADRVYAEYPIAHAVRRETPVVRRGVIDLAWRADGRWTLVDHKTDRVQG
RPPETLSPDHAYVQQLQAYARAWAAVVNEPVAEVGLWLADAGTHLFGEPT
GEEHSLSLGRRAAD
>SRU_2010 putative transposase, orfB
MRLFCQDECRIGLMPITRHRVTLPGVKPIQEAKPGYEYFYLYGAVEPETG
QRFFTEHERLNSDCFQRFLDRFAEAFPRSHNILVLDNGQFHKAKKLSIPK
NIDLTFLPPYSPELNPVERLWQDLKDQLSFDFYEHLSSLRQETRMALRRY
TDRAIRSLTGYSYLLEARHVLSS
>SRU_1441 exonuclease family
MEIGAVKVRDGSVVDRFQQLVNPQQSVPGRITKMTGITTGMVFEAPPADE
VLPDYRAFLGDGILVAHNVSFDGSFLDAELQRMGDETLPNETLCTVRLAR
RLLPGLDSKGLSRLAQFYDIDVEGRHRALGDAEATSVVLRRFVSQLAFEH
EVETVEALLRFQHQSYQTVREVPGHIESIRDEVLPDVPDEPGVYVMKNRS
GTPLYIGKAKRLPDRLRSHFTAVESSGARKRKMLQKVRSVDWTTTATELE
AILLESRRIKAEKPRYNRAQRRYYNRPFIRLDTAHEYPTVSWTRRLEADG
AEYYGPVRNTEQAEMVVDVVGRFFQLRECDDERLHLGQRCLYADMDRCTV
PCETKDAEAYATVVERVRAFLTGQDQSVLGTMRDRMQRASDNLNFEKAAE
LRDTLEQLERILEKQRVAAAPVRQHNAALVHQAPDRAGRVDVMLVRFGRF
EESIACAAPPSPEERDSLLERCRSVFDVEADPPETFSKRDATEIRLLSHW
VYAHRDELTAVRWTPRTSPADLADAIAGRVQGQPQQSA
>SRU_0184 ISSru2, transposase insA
MIKETHECRECGSSNIIKNGHSASGSQQYHCKDCGAHKVLDPEPRGYSEE
EKEKILRAYRERGSKRAISRIFGISRNTLNRWLEKRDTKPTQ
>SRU_p0026 nuclease, putative
MKFIRQLSLAAVLLVLPGASVAQVQPGQTFAARVVEVTDGDTFGVRRSAG
GEVIIRLRGVDAPESDQPYGTAATRAARRYVGGKNVRVAVEEIGRYGRAV
ARIEAEGSDLGAMLIGDGLAWHYDEYAPNESEYRRLERQARNAKRGLWSQ
SSPVPPWEWRDRTSGPGETSFEDRDCSDFDTQPEAQRFFERHRSDSSGGD
PHNLDRDGDGQACESLPGGRNM
>SRU_0861 putative membrane protein
MSSYPTPSEYQEALQAPAVAFADPELQDSTPRTNALGLPQPITGSFAAVF
PVTTDPGGRYAVKCFLSERPAQHARYEAVAEALDAVDHDAFVEFAYQPEG
ISVRGDAYPLLKMEWTGGTTLNRFVEDHLDRPDVVDRLVEAWARLMADLE
DMDLAHGDLQHGNVLVETAGEALRLRLVDYDTMYVPALEGRASAEVGHRN
YQHPDRTDADFGPALDRFSGLVVYAALRACAVRPELWDEYDTGENLLFRD
ADFYAPEESPLFDALAETESLRALTDALRTACYVEPADVPPLADVREGRL
EPSQVSVSRSRARQGRDAAERSTVARAFLPATIGGGGVALGLAAAGGGLT
AAAVLLVGIGVGAGIVATRYRRLSLVRRRRRLEQEADRFASTIRELDREL
ESLQKKRAELRTSMDERRQERLREIQAKALHDRLKHHFVREVRDIDGLTH
KHVVRLKAANLRTASEVTPEAVEDVRRISDRARARLKMWRAALEEKYADE
IPDALSPAQERRLQRYIEHRIDDLDDQIGRTREKIQTQRTERERIEDRLD
EMPDLSIGRYVRYLLRIDTLPDRTEEPPAPAPRPGPESSTDRVPVPEPVD
EDRSWWERA
>SRU_0192 IS605 family transposase orfB
MYLTRKFHIEGTEQLERLSRSSADLWNSICKWYWRTVDRQDHWLSKTAMR
RWHCKGHDVLPSQTAQEVAEQFYEAIDSWHDNDRKGDPPKRSDKTYNVLR
WTYQGVTLRDDGVLRLSTKRGDDSILIDWPAREEPRTVEIGKTSGGFVVR
AQYDTEPVDRTTGNKVAGIDLGEKHLAAVFTGGDAFTVNGGELRALRHYQ
NSLKAKLNAKIDRKERGSNRWNKLVETKQEQLDHIDNKITDLLHKLSRKT
VEMLLERGVSAVAIGDVRGIRDRMGYGTKMNQRLHQWAYGEFARMIEYKA
KLAGITVERVDEAYTSQECPHCGHRKKSSGRSYTCSGCGFHGHRDVVGAA
NIRRKYVGSDDQTRLPGVMASPSGVRFRPHLSCSSRSRRRTSRQPV
>SRU_0236 transposase
MAQKKGFKYRFYPTDKQKAVLAKVFGHTRYVWNWALELRTDAYYEEGESL
SYTDTAKRLTDLKKEKTWLREVSSVALQQKLRDLDQAFQNFFDGRCGYPN
FKSKHDKQAARFASNAFTLHGKKLSVAKVPGSLNVRWSRDLPDEAKPTSV
TLTKDPAGRYFVSITSAVPEPDPEPTVTDGDGNQKSVGIDLGIADIVVTS
DGWKSGNPRHLENDLYRLRKAQRRLSRKEKNGSDGPSENWKKQKRRVAKI
HAEIKDKREDFLHKLSRRVVDENQVIALESLSVKGMQQNRSLARPISDTG
WSTLVRMIEYKAKEAGRTVVKIDRWFPSTKRCSECGYVTESKPLSVRSWD
CPRCDTTHDRDINAAKNIRTAGLAGAFQKANDSGGHSKTRDAFRIERFGA
NAHGPVNE
>SRU_1506 tyrosine recombinase xerC
MLVRRWLAEKSARTQEEYARDFEQFVEFVDLPLRYVTLGHLQEYREHLKD
GYARSSQKRKLSAVKSLFTFGTKLRYFAHNVGAALSTPSVRNDRAERILS
EADLWALLRDERDLRNHVLLRLFYASGGRISDVEDLRWRDLKDRPDLNGP
DGRPGGQVTFFGKGGKTRAVTLYSKVWSLIIRLRENEESEGHGAADDPVF
RSQKGGCLSRSQIWRVVKKAAVRAGVKLTEKTGSEGAVKRDEEGEPIMTS
EVSPHWFRHAHASHALQKGADLELVRETLGHESIETTKTYLHAQPGKSSS
YYVDEAPDFNG
>SRU_2024 ISSru3, transposase insB
MAQKKGRESDSVAEGLRPAEEGDVLELDECWTYVRERANKRWLWVALCRR
TRQVVAFVIGDRSARTCARLWSRIPEEYRQGRSFSDFWKSYRPVFAGDPS
HRQVGKSSGEMAHVERFFGRLRQKLARYVRRTRAASESERMLHLTTKLFV
EWYNEAIT
>SRU_1807 hypothetical protein
MRVHTFHELPVRPLCFVPCNRQVVRGIAFAGRPHHFLRSSPPSMPAVSAS
SASPGAQLRALCRAHPHAPKVVLVPRTQIGRALEDALARDADGWAGVSTR
IVRHHAEQVAQPRILASGRRELPVGGRSFLAARLLKQLQRQGRLDGLPGP
RQLADTVAEAIETLRRNGAPLADVQARAQTEDASATFRVVADCYEGYLDA
LDAHGLYDDAQVLRWAAESVREATPPAVEASVVAVCDAVDLPEEAQQFVR
AVRAGAEAFYRIGRPQPEAPPPQTAAARFVDAPLPPGETANGTVQEVHVR
RAVGSAKEVDALVRDLLDADVPFDEVEIAVAGEQPYVSLIADRAARVGLP
VSIATGVSAGQTRTGTALLAFLEWVTEDFDPAVLIRMLRSGHLRIDRMRS
EMENETGAGSLEAHEVATLLAARRYEPGRDGYAKALGAAIGELEDRIAEL
EEQGLEPERDRERRRALRFVARLVEALLDLVPREASVQEMAARAQRFVER
FGPVDPPPEDKPEADRTLDEAGRTVLWQRLDRLVRVPVDYEASGPQLAAL
LRRWLEGQYVRAEHPRPGTAHVVPLESAGYGARSHLYVVGMDSDTLSTAA
VEGAMLRDPDRRALSDSMDGELPERRSASDEAQWHHEQALARHTGVLSLY
TRIFDLDSGEERYPSPLFLRLAEAPTVESERTEGIVPTGERTRLNDMEAW
LTAFRNRGGEGRGTGTARDALSDCYPWLRRGEDARQARQSDAYTAHDGLL
EAGTYPELDFLRDRENGGPMSAGRLETFAETPYLYFLKYVLGVEPLDEPA
LDDEPWLNALRRGSILHATFEAFMTTLREGDERPAAEHEPLLEDTLQAAF
KAETEQVAPPSDVVEEAAFRRLRADALVFLRAETAHCRTHAPLYHEVGFG
YGPYRRQEEDFGAVTIPVEGREMSLRGRIDRVDRRPDGTLAVWDYKTGRA
SSFEEGDPVADGAQLQWALYAYALSTLTDETVGTSGYYFPTTRERGTRLA
FDPGRYRTEVERLLDRLSSLAASGSFPMHPRARYLNAWRYRGYDRLFRDL
AARSTALQAKAYPDERPTPPSFG
>SRU_2007 Ser/Thr protein phosphatase family protein
MADASCRILCTGDLHLGRYPSRTQSRDRAWAVDSVWADTVSYAVEQAVDV
VALTGDVVDDQNKRYEALGPLQRGLRRLEEAGIPVVAVAGNHDFDALPRL
AEMVEAEHFHLLGRGGEWSTVTVAPEGRSPVQFVGWSFREAHEQASPVES
FPDGRLRDDAPTVGLLHADLNAPGSVYAPVSLGALRQCPVSAWLLGHIHA
PSLRDDRSPLVLYPGSLQPLDPSEPGPHGPWRVEVAPDGTSTAAQLPRAP
LRYEHLEVDVDAIDDEGAVEAAVTDAMRDRLRTAREEGPTPQRLVCRLTL
TGRTPVHRAVCDLVETWPGALEVPVAESTAVVEAAAARTRPALDLERIAE
GTDPPAVLAQLLLAMRDGAEDEHAQEAWTAIKAACSAVQDSPAYDPLPAA
DDLSPDRETLADMAWRQGLLLLDELRSQTDAAPQE
>SRU_p0002 umuC protein
MDHVFALIDCENFYVSCERVFDPSLRGRPVAVLSNNDGCVIARSEEVKEA
GVPMGAPLFKWREELDEIEAEILSSNYTLYGDMSRRVHSIIEEEALALER
YSIDEAFARFPGLSRDNLSRVADRLRRRIRRHIGIPVRVGVGPTKTLAKV
ADLNGKARKRAGWGQGTYVCPDEPKREELLKRVSVGDIWGIGSAYEKTLQ
EKGVASAAGFRALPGPWIRSEMTVVGLRTAWELRGRSCLDLELVRPDRKT
MVRSRSFGERVETKANLREALAKHAQRAAEKLREEGLVAKGIKVFITTKR
FGDPPHYSNGVAGALPEHTARASAFAKASRRLLEPIYRSGHGYKKAGVCL
YDIRPSRPHQESLFGQGRKEDEDLMEAVDQINRKHGKGAIGLAAAGLPEG
KGHLEREWTMKRQRRSPLYTTRWDELPVAQSS
>SRU_1539 putative DNA polymerase IV
MSGYDPDGTSGNDTEKDARRIVHVDMDAFYAQIEQRDFPDRYAGKPIAVG
GDPPRGVVQTASYEARPYGVHSAQPAVEADRKCPDLIFVSPRMDVYQEES
KRIRKILRRYTDLVEPLSLDEAYLDVTEPKTGRPSGTLIARRLRAEIYEE
TGLTASAGVGPGKFVAKVASDLDKPDGLTVVRPDEQMEFIAQLPIEKFHG
IGPVTAAKMQELGIQTGADLQETPERTLIHHFGKRGRHFKTLAVGTDDRP
VQPDRDRKSVGAERTFPEDIARAETMLDRLSPIAERVAQRLRQANRKGRT
VTLKLKSHDHQVSTRQTTVDRPLRAEDALMTITERLLRRPHPPDEPVRLL
GISVSSLTDEERAGGQLEFDFRP
>SRU_0001 dnaA, chromosomal replication initiator protein DnaA
MDQSADRAWNECLDIIRDNVSRQSFTTWFEPLEAHSLEDEDDLRKLTIQL
PSRFYYEWIEEHYFSLLRKTVTRVLGPHGRLVYDVVIEQDDPEDPDRGAS
MQLPARPADPESAPPPNAPDEPEAPPSSSEASASSSEPSAPAPSGDEARP
DDAQAGAEGDEKSAPPVQNPFAIPGLKNAEVDNQLNDSYTFDRFIEGACN
RLARSAAHSIATDPGETSFNPFLVYGGVGLGKTHLIQAIGNHVAARDASK
TVFYVSSERFTTEFVQSIQENQIGEFSTFYRQVDVLIVDDVQFFGGKEKT
QEEFFHIFNALRQAGNQIVLSADRPPREIDGLEERLLSRFQWGLSADLKP
PGLDTRISILRRKAEDDGIDLDDDVVEFIAQSIESNIRELEGALIRLLAH
ATLHQLDITLDLAKEVLHDLFQERAATLTVDDIQRIVCEHLGISQEKMRS
KTRKRDVTRARQIAMYFTKKHTQHSLKDIGLHFGGRDHSTVIHANNAVED
RMADDESFRDTVDAIGQKLERHGQ
>SRU_1369 dnaA, chromosomal replication initiator protein DnaA
MVPSASDAWRTALRDLRETLPERTVQNWLDPIQPLDLSTDEGSPTLTLQV
PTPFGIQYLRSRFQRSIRQAVSEAVGEPTDVTYQVAPEEERPDEIATDSG
SSGSAPDEPDASSSPQDRPSSAPSSDQAGRSSTSPRPSEPVSSSSPAGRE
AINQSPSPDASTSGGASSPTGPTTPRPSSPDVADVSDAGRTDDASAPSPP
QTDAGSPDERSALYEQAKQHLRPEYTFDEFVEGDGNRLARSAAFAVAQEP
GSTNYNPLLVYGGVGLGKTHLAQAVANYALEHNTAERVLYVSSDRFTSQF
VQSVRENRIAAFSSYYRQADLLIVDDVQFFGEKEKTQEEFFHIFNDLHQN
GKQIFLCADRPPAEIPGIEERLLSRFQWGLSADIQRPDLETRIAILQRKA
ARQDIAVSPDVLELIAQRIDSNVRQLEGALTRLTALVQLDDRTLDLDTAR
RFLREHTDEGADALNADDIIEQVAEYFRLEKGDLLSRSRKQTVAQARQIA
MYLCRELTDESYDHIGSRFGGRDHSTVIHAYRKIEEDLESDTELQDDISS
LQSNLQDRSLSSSL
>SRU_0979 dnaE, DNA polymerase III, alpha subunit
MPNFSHLHCHTQYSLLDGAAGIDHLIESAERRDIPAVAITDHGNLYGVPE
FYTTAQKSDVQPIIGCEFYLTPSGIQDQSDPTRYHQVLLAKNQTGYENLM
QLSSTSFLEGFYYKPRIDLDLLRKHHEGLVATTCCLQGQVPQMILNQGEE
AAQEKFEEYLDIFGDDYYIEIQDHDIDDQHTVNEVLLQWARAYDVEVLAT
NDVHYVDQQDHEAQDILLCLQTGDDYNDPDRMRFSNDQFYLKDSAGMMEA
LTGIPEEFQREALVNTNKVADKCSFDLPMGDLLMPHYPIPEGFEDMDGYL
RHLTFERAKERYGDPLPQTVVDRLNHELGIIADEGYSGYFLIVQDFTDAA
RELDVRVGPGRGSAAGSCVSYCLGITNVDPLEYDLLFERFLNPERVSMPD
IDIDFDDRGREKVIDYVVEKYGQENVCQIVTFGTMGAKTAVRDVSRVLDI
PLDRADEIAKMIPDGPGVDLEQAFDENPDFRALKDANNPEVSKMMQYAEV
LEGSVRHTGVHAAGVIIAPGEISDYVPVSVAKSKGEEVVTTQYDGDWVEE
FGLLKMDFLGLKTLTLIEDAVELVEDTRDVDLNIDDIPLDDEATFELFQR
GDTVSIFQFESTGMREHLRKLKPTEIGDLIAMNALYRPGPMENIPTYVAR
KHGQEEVEYPHPLLEDILEPTYGIAVFQEQVMQMARELAGFSLGEADILR
RAMGKKKEKLMRKQREKFIKGCQAENDIPEDEADELFDIINEFAGYGFNK
SHSAAYSLVAYRTAYLKAHYPPEFMAAAMTNEMDNTDKLSKVLEEARSMG
LEVLPPSINRSQSRFTVEQGPDGAYRVRFGLAAIKNAGEKAINALIDARE
EHGPFDSIFDLTKNVDLGTVNKRTLEALAQAGALDDLEGHRAQLMEIMDK
AVRYGQKVQHDRMAGQNSLFGNGDAGTEAMQPGLPDVETWAKSQRLKEEH
EVLGFYVSGHPLDEYRAEADAFATAHFGEPDQLEQVIEQAAGGDGRNRGP
VRTFCGIITEVDRNTTKSGKPIAFATIEDFTGQGEMVIFSSILDRVQPYL
EVDNVVLAKGNVEVRGGTVKVLAKDLTPMWKVREQMVSEVILTVDLDQVM
PDELQTFRQLCERTEGNCTLYFDVDAPELRGQERLRSRAYVVEPTAEFMR
GAQRIFGPDNIALKGN
>SRU_0970 dnaG, DNA primase
MAIPDEKIEEVRTAVDLVEVAEDYVQLKQSGSRYMGLCPFHNEDTPSFSV
DPDQNLYYCFGCQNGGDAFKFVQEIEGVGFLESVRMLADRYGVPLPEEET
DPDAANEREAVLHALRFAARFFYRQLTQSDRGRPALDYLRRRGFTPQTIK
QFGLGYAPDEWDALLTVAEEEQIDRETLEKAGLIIERNDGSGYYDRYRGR
IIFPIFSHIGKVLAFAGRILDPDDERDQPKYINSPETEVYHKKEVLYGLH
QAKQAIRKTDEVLLVEGYTDVISLSQAGVGNVVASSGTALTEQQIGTLDR
YAKRAVMLYDADEAGERAALRGMERVLEAGLGAYAVELPAGNDPDEYVQE
HGGDAFSDYVQEHRQDLPSFAYQRARRNGVLETPEDRVEVQREIIESVAR
IPDPNLRREYVAHTSEVTGVPDSDLFRMLEEEREQMERRAQRQRKREQKR
QQRQAEEGASPSGEQAAPPDRNGASPPPPNSTTGKTASGPALLPEERVLF
RLMLENGRRMVSLVLGHMALDEFSEGAPRDFARAFAEMYEDGTVRPQQIL
NGEHGEALQQLGASVMMDEHEASEHWAQKEDISVPHLNDRPYEAARSAMK
FLKMDRVDEAIEAVRERMYQASQQGADEEVQRLQQKMMSLQELRKGIKRG
EFLED
>SRU_0002 dnaN, DNA polymerase III, beta subunit
MKFTASSADLLEALNTVKGAVPSKSTMPILECILFERDGDTLRLSATDLE
ISIIQTVPVQFEKNGTPESTPIAVPAQRLIDTLRALPDLPIEFAADSDFE
IRMDTDQGHYKMVGHDGSDYPELPELEEQHEINVEGGLLGRSIDKTAFAV
SQDALRPAMMGVYFQVSEEETSVVATDGHRLVKLTLPELRADTSADFIVP
EKATKLAGRIVEDDEICTVRVDDSHVSFEFGESRVLARLIDETYPNYQSV
IPDGNDRNLVVNREDMLNAVKRVGLYSSSMTNQIRLDITADTVTISAEDV
ERSSEAEETIHCDYDNEPMEIGFNSEYLTEVLSNVECDEVVFELSSPNRA
GIVLPREGADDEDILMLIMPVMLNTYA
>SRU_1187 dprA, DNA processing protein DprA
MRLPLPDDDEPPGQHQASDQRALIGLSLVSGVGPQRLRALLAAFETPTAI
FRASRSTLTQVDGVGDQTAEAILTFDDRAAVRREMERADDLGASLVSPWD
ARFPDRLREIYDPPAFLWMRGTLPEDARPMVTVVGTRRCTDYGRTQAHHF
GAELARRGFTVVSGLAYGIDAAAHKGALDAGGRTVAVLGSGVGHIYPKKH
TALAERIAEHGAVLSEYGLDAEPDAPHFPERNRILSGLALGTLVVESYAE
GGALITARLALEQNREVFAVPGAITKDSSRGTNRLIQNGHAKLVMEVDDL
LEELPAVVVDDPDTVDAETVSSGAGRDPTEELSGEAERLYDALSETPVHI
DALCEETGLSPSEALPTLLELEFQGWVRQLAGKQFRRS
>SRU_2199 gyrA, DNA gyrase, A subunit
MEADDSRVIPINIEEEMKSSYIDYSMSVIVSRALPDVRDGLKPVHRRVLY
GMHELGLTQGANYKKSARIVGEVLGKYHPHGDSSVYDTLVRMAQHFSMRY
PLADGQGNFGSVDGDSAAAMRYTEARMTRIAEQMLTDIGKETVDTQENFD
GTMEEPTVLPAAFPNMLVNGADGIAVGMATKIPPHNLGETIDATVAYIDD
PDIEIDNLMDHLPAPDFPTGGIIYGYAGVYEAYHTGRGRVVMRAKMHEEE
VRSGRDALVVTELPYQVNKSREVERIADRVRQERIEGIADLRDESDRDGL
RIVIELKQGANAEIVKNQVYKHSRLQDTFGVNMVALVGGRPQVVTLKDAI
RHYVDHRHEIVVRRTEYDLAQAQDRAHILEGLTLALDHLDAVIAIIRHSP
DTGTARQNLRAGRYPDALSDDDLRTINVPLTPPGEADEEQDTVQALLGDE
YEELVQQPDEGDWLTEAQANAILRLRLSRLTGLEREKIIGEYEDIIEQIR
EYQRILNSRDRRMALIKEELLTVKERFDDERRTEIDYTGGDDIIIEDLIE
RQHVVVTITNQGLTKRTPIDTYRTQGRGGVGMRGTGKREDDFIEHLYVCH
SHDVLLLFTDKGQCFWLRPFEIPEGGRTAKGRSIRQLIDIDPDDRVRAVI
SVSKENFEDEAFLNSHYVLAATRQGQVKKTALEAYSRPRSNGIIGIKIDE
GDQLIEASLTGGDNTVVVASSGGRAVHFDEGDARPMGRNTRGVRGMELPG
DQELVGMISVPPAMHDDLDVLAIAEHGYGKRTALSDYRVQGRGGKGLITL
NRTDRTGALVSIKGVLGDEDLMVITEGGIMIRTRVGEISTMGRNTQGVQV
IDLKDGDAIADVTRVADTDEPEADDGTADDEAPDADAAAAANGEMDDDAA
SDAVEDTSGT
>SRU_2408 gyrB, DNA gyrase, B subunit
MSETTDLPDRAISDYAASNIQVLEGLEAVRKRPSMYIGDVGLRGLHHLVY
EVLDNSIDEAMAGHCDEIGVEIYEDGSVSIEDNGRGIPVDQHPAEDRSAL
EVVMTVLHAGGKFDKDSYQVSGGLHGVGVSVVNALASRFEVTVWRDGSVW
EQNYLCGVPEDPVRRVRPMEAGEETGTRIRFWPDGDIFKTTEFRFETLSD
RLRELAFLNAGVRIRVEDHREEDKGLARETYHSEEGIIGFVDYLDEARDS
ILDETIYIAETDGEVPVELAMQYNDEYNKNVLSFVNNINTHEGGTHVTGF
RRALTRTLKRYAQKNDMLSDLKFDLSGDDFREGLTAVLSVKVSEPQFEGQ
TKTKLGNSDVQGIVESLINTELGRWLEDHPDQAERIIEKVIQAAEARAAA
RKARELVQRKDAFSGGSLPGKLADCSSRDPEEGELYLVEGDSAGGSAKQA
RDRHFQAILPLRGKILNVEKARLDRILEHDQIQNIVTALGTGLTSTEEEF
NMNEMRYHKIVMMTDADVDGAHIRSLLLTFFYRQLRPLIEKGNIYIALPP
LYRIQNGSQEIYCWSDEEMQTRMAELRADGNSPSMQRYKGLGEMNPEQLW
TTTMNPETRKIQQVTIQDAAAADRLFSTLMGDSVEPRREFIERNAKYATI
DA
>SRU_0498 holA, DNA polymerase III, delta subunit
MAKDTGPSYDDLATAFRHQNFEPLYFFFGEETFLIDELQELLIDEALDPS
QHDFNLDVVYGSETEASEVIGLCQGFPAGAPKRVVVVREFEKLENNRQFK
DYAAQPNPQAIVLLACTSKPNLSAHPYRALKEHATWSEFESPYDNEMPGW
IQDYVQGQGYEIKPKAVQMLADYVGTDLQRAASEIEKLITFAGDATRLTA
DDVLAASGQTREFNVFELQSALGEGRPADAQRIVDRILQQASNPRSEAIM
MVAVLNGYFDKLWKLQKPGALRENKYDLAGYIGVSPYFVEEYKHAAQRYD
RSAIADAYSALVAADYELKGGASREASLVMTLLLRRLLPPDARPVAA
>SRU_2747 hrpB, ATP-dependent helicase HrpB
MPDLPIDDVLPNLTAALRERTEAVLQAPTGAGKTTRVPLALLGEPWLGDD
RLLMLEPRRLAARSAAQYMARQLGEDAGETVGYRVRMDTRVSAQTRIEVV
TEGVLTRMLQDDPALEGVGAVLFDEFHERNLQADLGLALALQAREVFRPD
LRVLVMSATLDTGPIAGLVDDAPLIQSEGRSYPVEVHYADQPISPGDRLA
PPVAAMVQEVLRDTEGDVLVFLPGAGEIRRTESRLEGDVPGDVTLHPLFG
NLPPGEQDAAIAPSPDGERKVVLATDIAETSLTIEGVRVVVDSGLRRAPR
FDATTGMTRLETVRVSQASADQRTGRAGRVAPGTCYRLWTKRTQHHLDPH
TAPEIENADLAPLALELAKWGTPDPSALRWLDPPPDDTYEQAQALLQRLG
AVDRDGTITDHGREMAELGLHPRLAHMLLNAQALGHGAVACDLAALLSER
DIFKGQGEAPDVDLRLRLEALHRLRRGERPTPNHARSYVVPYGAVGHVRK
VADHWRAKLGVDREAEGNVEVAGLLTAFAYPDRLAQRREGQSGRFRLRTG
RAATLPRPQLLSDADYLVAAHVDARRQENRIFLAAPLSEDEIVDYFGDQI
ETEMRVAWDAERERVRARRREQLGALTLTEGPVEAPDPTAVAEALVEGIR
EAGLGLLPWTDHARQLQHRIQFLHHHLGDDWPDAHDEALLDTLEDWLLPH
LYGLKRADDLQQLNLPQILRDPLSYDQRDRLEEWAPTHVTVPSGFDRAID
YSDPEAPVLAVRLQELFGRTETPRIADGRVPLTLHLLSPAQRPVQITQDL
EGFWRGTYHEVRKDMRGRYPKHYWPEDPIDAPATHTTKARMDADA
>SRU_1063 hup, probable DNA-binding protein HU
MADQVDTATKEDVARRVANIQECPLYEAKEQVRSVLTALGDLMIEADPER
RIELRNFGVFEVKKTKAKPTARNPKTNEPMFVPSRRKTLFRPGKRVEEVL
KTPLRELGYEVPEGSAERDDGEADDE
>SRU_0888 ligA, DNA ligase, NAD-dependent
MPDVDPTPDLDLEAIDSEPAAAEAAEQLRAALRHHNYRYYVLDAPVVSDA
EYDRLFQQLQTLEAEYPVLQTPDSPTHQVGGPVRDELGTVTHPAPMLSLK
AVYEEDEVRNFAETCREELGRETVTYIAEPKFDGLAVELIYEDGRLVQGA
TRGDGETGEEITANVKTIKGVPLRLRDDARPVPDRLVVRGEAYMRKDEFN
AFNRRREEEGKKVFANPRNAAAGSLRQLDSNITARRPLRIYFYEIAPVDG
RDFATHAEVLEALPEWGLRVCEDHIRRCDGIDAALAHHAALVDRRDDLPY
EIDGLVIKVNDFDGHETLGVRDRDPRWAAAYKFPPRRATTSIEDLFVQVG
RTGRITPVAVLAPVEVGGVEVTRASLHNQNEIDRKDIRIGDTVLIERAGD
VIPQVVKVIEDERDGTEAPYHIPDACPVCGSEVVLSDDKKQAFCTGGMTC
PAQFRERLKHYASREATDIEGLGDKRAEQLIDAGLIQTISDLYELEKADL
LQLERYADKSAQNLIDEIEASLEQDLDRFLYALGIPLVGSATARLLAQHF
DTLDALVDADEDALTTIDDIGPEVAHSIATFFADDANRGVIDEMRDAGLT
LTNPYAEDAARLEGLTFVFTGSLEGWTRSAVQRFVEQHGANATSSVSGNT
DYVVAGPGAGSKRDDADDRGIPVLDEDAFHALLREQGIDA
>SRU_0063 mfd, transcription-repair coupling factor
MSLTAIANRIETTAAVSRLRAWTAEAQRGDRSPALHVNGAAGSLPAFLLY
HLHREPGAPLCVLTPDEDAAAYLQSDLEQLVGEPDEAILRVPATQKTPYD
PDQIADSTPLIERADALQRLAEGFEGILVTSVPAVGELVPPPQAVQRETL
TVENGEEIALEALADRLLEQDFSPVEFVEEPGEFARRGGILDVFPYAGTY
PIRIDFFGDEVDGLREFDPQTQRSVSRLTTARLVPNLEREEAARGSIALF
QYLPDEAVLATLDEAQVREGAQAQFEEAAAAYEERRAELAENDEVEQTPE
DLTPPDDRFLTGDQMAAALTRHPRLQFGTFSQSSTNGTPTDTLDLEADPQ
PSFNSDMDLVRKRLQKNGDRDLDTFILCDSHGQSSRLRDLLESEIDHGWA
RLVVESLHEGFEWPGAGLAVFTDHQIFNRYHRPSTKQWEGHADGMNLRDI
KNLTRGDFVVHVDHGIGRFDGMKKITVRDNQQEAVRLNFADNDVLYVNVH
ALHKLNKYTGKEGHQPTLTKLGSEQWEKKKQRTKDQVKEVARDLIKLYAK
RKASDGYAFSSDTTWQREMEASFEFEDTPDQAEATKAVKRDMEEPVPMDR
LVCGDVGFGKTEVAVRAAFKAVQDGKQVAMLVPTTILAQQHHDTFSERME
RFPVNVEVLSRFRSRTEQSKVLEKLEKGQVDILIGTHRITSDDITFDDLG
LLVVDEEQRFGVKTKEKLRKMREAIDTLTLTATPIPRTLQFSLLGARDLS
LIETPPPNRQPINTEIHTFDEDVIRDAIVYETSRGGQVFFIHNRVKTIHE
VAEMVRAMVPNVRVGVGHGQMSASELEDVMLDFVNEKLDVLVSTSIIENG
LDISNANTMIINHAGEHFGLSELHQLRGRVGRSQRKAFCHLLVPSVHGLT
DDARERLKAVEQFSDLGSGFDIAMRDLDIRGAGSLLGAEQSGFIEDVGYE
TYHKILDQAVKELREEEFDDVFDGEAVPPGPETSVDVEEDAYIPESYLRD
NTERLNLYRRISDAPDETTLVDLLDEMEDRFGDAPEPVQNLLTGARLRLL
GERLRMPKVVYKNERLFLYLPSEDADPYFYDEVFHPLLEKLTLLDREYVM
KDDVEGGLMRAIVQDVNTLDEALQVTESLLLEETKTMATVEA
>SRU_1712 mutL, DNA mismatch repair protein MutL
MSDRLANQIAAGEVVQRPASVAKELIENALDAGASSIEVLLKDAGSTLVQ
VIDDGCGMGPGDAERCFERHATSKLRSVDDLERIRTLGFRGEALASIAAV
AQVTLKTKRVEDDAGTLVRVEGGEQVEKRPCAIPNGTSVAVRNLFFNVPA
RRNFLKTPATELKHLTQTVQSLALANPDTAVRLEHDGHEHYDLPAAPDSD
WHAATRARILGLFGGDHEDELVAVEDESSDLRLRGFVGAPSFHRKTRGEQ
FLFVNGRAVTDRYLSHAVKKAYGELVPDGAFPFFALFLAMNPERVDVNVH
PQKEEVKFDDQSGIYGFLRSAVRRALGRVHVSPQMDDGDDEADNEEDSPG
PESDGTGSGGHAVSGDGTSSPRPTPTSFQPQRSSGDATDSSGRSSSGPSP
QSPKPRPENPSVSPGDQSDALYRRPDGGDESSPGDAPASPPHREGGSSST
SAADEAERSGRRPVWGLHDTYVVTPTETGMMLVDQRAAHLRVLYERARAH
LRDQQGASQRLLFPHTVDLSPAEVELLDELRDDLDALGFELERLSGRTVS
VRGVPADVPDGNEDTILEELLEQYRSAQDAVEDERREHLAKTMAQRSAVD
RGQPLSEEERRALLDDLFDCEMPYADPTGTPTIVKLSMEELADRFGR
>SRU_0462 mutM, formamidopyrimidine-DNA glycosylase
MPELPDAVVYRRRLADAALDRPIADATVVDPLILGDGLEPHRLGEVLRGR
TLTDTHRHGKHVFVRYGEETGWLALHFGMTGRVQVVPDGTMPEYAYVQVH
FEDGGALAFECPRKFARVRLVDTPDAFVEAKDLGPDARRADVDAFLAPFA
SRRGAIKGRLLDQSVVAGLGNIYADEALYQEGIHPRTTVPELSETDLRGL
YDAIQRVLDAAIAVDADPEALDPDRFMLPHRYGDEHCPKTGVPLDTETVS
GRTAYFSPTRQSPPK
>SRU_1606 mutS, DNA mismatch repair protein MutS
MAQSSTQQRGRTPLMRQYYKIKERHPKAILLFRMGDFYESFDDDAKTVSR
LLGITLTERNNGDADDVPMAGFPHHALDSHLPKLIRSGLRVAICEQVEDA
DDSSGKVVDRDVVEVVTPGVSFHDQLLNPKQSNFLAALHFGTGRDKDRIG
FSFIDATTGEFSVTEAGLDQLQDLIQTVAPSEVIVDKRKTERLQQHLREV
PFTVTEQEDWVFKYDFAYQTLLEHFETHSLKGFGVDDMDLGVVASGAALH
YLGETQKGALPHVRKIKRYSKDEHIALDPETKRNLELVQSIQDDGHEGTL
VSILDETETPMGGRRLRAWLVRPLRDVGRIRHRLDAVEACVDDRTLRDDL
REELNQMGDLERLAGKVATGRAAPGDLIAIKHTLRRLPNVLGLLTDADSD
ALGAIEDDLRSCPEMVDRIQSALVDDPPAKISEGGLIRDGYSEELDELRT
IAQEGKDWVANLETEESERTDIPSLKVGFNKVFGYYIEVTNTHADKVPED
YIRKQTLVDSERYVTPELKEMEEKILTAEEKIETLEQELFNELRSQIAQQ
TGILQENAELLAHLDCFAGLAEVAEQHDYTRPSVDDGLTIDIEEGRHPVV
EQTLPPGDPFIPNDMALDPDDEQVLIITGPNMAGKSVALRQVGLIVLLAQ
VGSFVPAEAAQIGVVDRIFTRVGASDNLAAGESTFLVEMNEAANILNNAT
ARSLILFDEVGRGTSTFDGLSIAWAIVEYLHERPEVAARTLFATHYHELN
AMADRLERVHNYRIQVSEHEGEIVFLRKLIPGGADHSYGIEVAKMAGLPD
AVIARAREVLQNLESQHLEVGADEADGAPSEDPPSEDPPSGDGVRAKKGE
ADAVPDLEDSQANQMHLFGQPDPAAEEIKEMLGEIDPNRITPVEALMKLA
EMKETLAD
>SRU_2119 mutY, A/G-specific adenine glycosylase
MLDWYDTHKRSMPWRETDDPYRIWVSEIMLQQTRVDTVRDYYHRFLEAFP
TVEALADADRDTVLKHWEGLGFYARARHLHTAAQHVVDEHDGTVPSTMDA
IKDLKGVGPYTAAAVLSIAYRKPHAVLDGNVTRVLSRVFAVDEDATTSAA
EGHLRDLANELLDPDRPGDFNQAMMELGALVCTPRTPHCDRCPLNAVCRA
HDAGTEEDYPITPESEPVPHEDIAVGLVFDDNDRLLIQRRPDEGLLGGLW
EFPGGKQEGDESMEAACRREVREELGVGMTDVEPFYTLSHAYSHFKITLH
AFRGRLADGPPEAREDQPFRWVTVDELDDYAFPRANRRLIEELVRRQTEP
SLFD
>SRU_2800 nfi, endonuclease V
MQDSRPHPHDWNVSTDEAKRIQRRLASEVTERALPDGGETVAGIDVSVRD
DTAQAAVSVLRLPELDVVDEATHRCEVPFPYVPGLLSFREMPAVLPALER
LHSTPDVFVTDSHGAAHPRRFGLACHLGVLLDAPAIGVAKSILVGAPQGE
LGPEKGSRVPLVDDGETVGTVLRTRTDVNPVYVSVGHRCTLDGAADLMLD
CSPRYKIPEPTRQAHKLSRAEG
>SRU_2356 nth, endonuclease III
METEGAMGHDVKHWANWSRLERSPAPWVQRADVIFEPAHPSPVGRSDRAD
VVLEELRERIDRPTTELQYDTPYQLLVAVILSAQCTDERVNKATPDLFDA
YPAVEALAEATPDDIHPYIQSITFPNNKAGYLARMARQVVDNFDGKVPET
IDDLETLTGVGRKTARVVAQVAHDADALPVDTHVFRVANRIGLVKEDATT
PKKVEQQLKRVIPKAEWGEAHHLLILHGRYTCTARSPDCHDCPIHEECKH
YDRLQRLPDPIDGLDSSAGTYYCTTSDHYFDDPETHVDRYDLEQVACPRC
GSMQVVRTSTGEPTKQVKDYRVNG
>SRU_1754 phrB, deoxyribodipyrimidine photolyase
MSLLPDRIQPLNDKGVQEGARYVLYWMEQSQRAQHNPALERALHHASETG
LPLLVVCGVTDDFPEATLRHHTFLLEGLQETKQRLADRGLKLVVREGAPD
DVALAHAGAAAVLVTDRGYLRHQKQWRARVAEEAPCRVEQVEGDVVVPVE
TVTDKAEYAARTIRPKIHEHLERCLQLPEPVPVETPSLDLDIDSGRSLDD
IAAVTDQMDLDRGVGAVSDLYPGGVSEAEAILDDFLAEHLDGYDENRNQI
HSHAVSHMSKYLHYGQISPVWLAQQVRRAEGPESDIESYIEELVVRRELT
MNHVHFRPDTYDSYTCLPEWARESLAEHADDEREYVYSLDELEGGTTHDP
YWNAAMKEMRETGYMHNYMRMYWGKKILEWSPDPKTAYDRTLRLNNRYFL
DGRDPNSFANVAWVFGLHDRGWKERPVYGKVRYMSQGGLDRKADPDAYVE
KVDRLATVAQSA
>SRU_1179 phrB, deoxyribodipyrimidine photolyase
MLSTALVWIRNDLRVRDHAPLRYAADHYDQVIPVYCFDPRHFGTTMFDLP
KMSSIRARFLRESVQDLRDSVQDLGADLVVRGGRPEDILPELVRQTGANE
VLQFQEIGGEEEDVETAVEDALRDTGATPGFFWGKTLYHIDDVPFDGPDD
IPKVYTNFRKAVEKKSTVRPTLDAPDSLLPLPEDLNPGSIPTLDELGFDD
DGTVDERGVLPFRGGESRGHDRIDEYIWRGDFLKKYKATRNGLLGANYSA
KFSAWLAHGCITPRQIHEEVERYEDQRVDNKSTYWMKFELIWRDFFSYVT
WKAGERLFRPGGINGNDIDWRYYDKSFERWAAGTTGIPFVDANMRELNRT
GYMSNRGRQNVASMLSQSLKLDWRMGAAYFESRLVDYDVASNWGNWAYNS
RVGNDPRARYFNIVKQAKRYDENGEYVRYWLPELADVPDKYVHEPNRMSH
EQQKKYGCVLGADYPKPVVDLDKTYQRIRNERG
>SRU_1083 phrB, deoxyribodipyrimidine photolyase
MPDRSLFLFRRDLRLADNTGLARACRASDEVVPAFIFDPRQCDPDNNAFF
SEHAFAFLVRSLKELRRRLRERGGRLFVFEGDPAAILSELVSAGDISAVH
VNRDYTPFARRRDDQLRSVCREEGARFQSSNALLLTEPEEVQPSGGGAYH
TFTPFRRRAQSVSTPPPRGKVEGPFCDRALSVETTPLETYDRYPTDDLRA
KGGRAEGIEFLEEIETLGAYRDARHQPAKESLTALSAHHKFGTISIRESL
YVVKKAFEDYHKLISQFYWRDFYTHLLFHRPEQLTTSLRPIGRHIPWRNE
RGEFDRWHEGATGVPFVDAGMRELRETGYMHNRVRMVVASFLTKDLLVDW
RWGAQHFARTLTDYDPAVNAGNWQWAASVGTDYRLRIYNPYSQAEKHDPE
AEYIKRWVPEVRDVDADRLASGTQEDFSDAAPGYPAPIVDRNDAYHRAKD
AFREAGRALEEAQ
>SRU_1635 polA, DNA polymerase I
MSPPDAAPDDSALYLIDAMSLAYRAHYIFISRPLINSKGQNTSAAYGFTN
SLLKLIEDHDIEHAAVVFDEGEEDTFRKEMYDDYKANRDPPPEELLENIP
YIKEIVEGLDIPVLEVPGVEADDVIGALAKQAEADDADVVIVSPDKDFKQ
LLSDKVSIYKPAKGDQDFEIKTGDTFRDEYGLDPAQFVDMLALMGDSSDN
VPGVYGIGEKTAQKLLREYHSVENLIDHADDLSGKRAREGMQEHAEEARL
SKRLVRIRTELDVGLDWHELQRRELDEEKLTAVFQELEFDSFGDRLGIEG
GEGSEEETDEDDPDLQFDFGPYEKVQELDPEAVDYEVVRTEEELHAFADR
LGEEARYAFDAEATSRDPMTADLVGLSFSSEAERATYVPTPLPDDTPTDA
VLDVLGPVLARDTEKLGHNLKYDLLLLKQHGVEVGGTLFDTMVAHYLVAP
EENHNLDDVARSVLNYKMVPIADLIGDETDRDSMREVEVETAAPYACEDA
DISYRLADELEAQLEDGNVLDVAHDIEFPLVHVLATMEHTGIRLDTDVLD
EILAGLEERLSGIEEEVFELAGEEFNINSTQQLGEILFEKLDLPVVSKTP
TGKPSTKESVLQELSTEHEIPGLVLDWRSTYKLKSTYLDSLGELVHPETG
RLHTSFNQTRTATGRLSSSDPNLQNIPIRTEMGRQIRRAFVPKDGWALLS
ADYAQIELRILAAMSGDDAMRATFQEGGDIHTDAAARVYGIDPEDVTPEQ
RSKAKEVNYGIPYGISPWGLAQRMRMPVDEAQDIIKQYRKSYPGVSQLLN
ELVEKAQDKGYAETLLGRRRYLPDIDSSNSNARSAAERVAVNMPIQGTQA
DMIKIAMNRIHDRLAGDDWATQMLLQVHDELVFEVPPDELDAAQTMIDDE
MRDALPLDDVPVTVDMDTGDNWLEAH
>SRU_2745 priA, primosomal protein N'
MTVNVVLPLPLDQAYTYRVPEALVGAAQAGARVLVPFRNRRLTGIIVGEG
PAAETLDFDVKAVLDVLDDVPVCTEGLLDLTKWIADYYVCPWGEALKAVL
PAGTTVETEHRLTRTDAAPDAWADHEVGRTVLEDLAAHGETTLAAVRKRV
GPAVPLALIRRMAADDVVAVETTLSDERVAPKTETHLRFAPAFQHKDAPD
DLIEQLRGNKQRAVVRALAGFRAEGTPEPRRTDVMERADASYSTVRSLVE
KGMLELVEKEVMRSPLDDLPAPDPPPDHDLLPAQQDALDAVTDAVDAHRY
GTFLLHGITGSGKTEVYIRALQAVRARGRTGIILVPEIALTPQTVQRFRA
HFGDEIAVLHSQMNMGERYDAWRRLRTGEAAIAIGPRSAVLAPLEDLGLI
VVDEEHEASYKQFDPAPRYHARDVAVMRAHRADAVCILGSATPSLESTMN
ARWGKYERLELPERVPDASGKTAALPDVRVLDLALQRKKHQLDGALADPL
REAIRTRVDRGEQTILLQNRRGYAPVLECEDCGWAPECQSCSVSLTLHRH
DGGEQLRCHYCGYAARVPRQCPECGGRDIHQIGTGTQRVEAELEEVVPDA
TILRMDRDTTREKHGHHDLLRRFENGADILLGTQMIAKGLDFSRVTLVGV
VDADVGLLFPDFRAEERTFQLLTQVAGRAGRTRELAGEVILQTRNPDHMA
LRYAQEHDYEGFAEEALAERRELGYPPFGHVATVEFRGPDEDRVERLAEN
WTEQLRQHAGPAGVMGPEPAFIQRVKKQHRYRTLLKVRGGSPGPLQTALR
RTRDAHGAPPNGYHVAVDVDTQDVL
>SRU_2338 radC, DNA repair protein RadC
MYRVPIHEWDESDQPREKLLTHGPTVLSDAEVLALLLGSGTRTSDGPVSA
VELGRALLQSYGSLHEVSQRKPKELTRTRGVGPAKATKLAAAFEAGRRVE
SQRQQDERMQVTCPADVADVYGPLLRDLDKEVFKVVHLNTANVIIGDYTV
SEGGLSSSVVEPRGVFEQAILDDAAAVICLHNHPSGNPEPSREDIRITRQ
LAEAGGTMGIPVHDHLIIAGTKHTSLAERGVID
>SRU_1531 recA, recA protein
MSDKDGEAKEKALDLAVEQIQRDHGEGAIMRLSDDPNQEVEAIPTGSLAL
DDALGIGGVPRGRITEIFGPESSGKTTLAAHVVAEAQKLGGTCAFVDAEH
AFDPNYAEQLGVDTDELLISQPDTGEQALNITDTLVRSGALDVIVIDSVS
ALVPQAELEGDMGDTHVGLQARLMSQALRKLAGTINRTKTALIFINQIRM
KIGVMFGNPETTSGGRALKFYSSVRMDIRRIGAVKDGQDVVGNRTRVKVK
KNKVAPPFKEAEFDLIYGEGISSLGEIIDLGTEYDILQKRGSWYSYQDET
IAQGRENTKEWLEENDEQRDEIKSALRGEIGLATVDEDSEEDEEEAEAAA
EEA
>SRU_0067 recF, DNA replication and repair protein RecF
MILHTLRLRSFRAHAESEFDLAPSINLLYGANGAGKTNVLEAVHYLCLTK
SFTASRDRYAVRKDAPYFEIEGRIGQVREEPMTVRLAYVPGEGKSIFVNG
AELDRLADIVGTLPVVVFSPEDYDLTAGGPSERRRFVNNILSQARSVYME
TLMKYRRARRQRNEVLRSYKKRSAPPPDELLAPWTEKLVGLGSRIVHRRQ
QFLQAFADDLEEAYRRIDAVAERPTIEYDTIADLAPDATPDAIEDEFRAA
LARKQGQERDRGTTLVGPQRDELVFRLDDLEVRRYGSQGQHRTFAMALKL
AQYFYLQQRNDTEPLLLLDDAFGKLDAERTGVFLDLLRSDAVGQSLVTAT
RRGPFEPALNAEPASHRALQVRPGGGTAAVTPDPEYARGEATAANGAASA
PTGADAASTSRD
>SRU_0269 recG, ATP-dependent DNA helicase RecG
MSEDFLQQDVRYVKGVGEKRADVWAEQHGVRTVHDLLRFYPRRYLDRTTV
TPVRQLQEGPDSVTVVGTVRSVNVVPGNNQKRLEIILEGEQGGRMKGTWF
QGVWWVRKAFDEGDRVAFHGTVEKYGRWHSMTHPDFDRLNDEGPLLDTGR
IVPLYPGGEAMSNVGLTSRTVRRVLYDLFKEHGLKLTETMPDWIMDGYDL
MEGRVALRAIHFPKTQQELSRARRRLKFEELFFIQLLLAQMHEQQEEVAG
PAFDDPGAYTREFVREVLPFELTGAQTRALREIIGDVQTGTQMNRLLQGD
VGSGKTVVAVAAMMHAYDSGYQSAFMAPTEILAEQHHANLQDYLQPLGLE
PRLLIGSQTKAEREAALQAVRSGASPVAVGTHALIQDEVAFDRLGLAVVD
EQHRFGVAQRAEMFEKGERPHMLLMTATPIPRSLALTLYGDLDVSKIDEM
PPGRKPVETRLRAEKRRGEVYAFLNDRLEQGEQAFVVYPLVEESEKMDLK
DAESGAQELQEKFPDYTVGLVHGQLSADDKDATMRRFKEGDIDLLVATTV
IEVGVDVPNATVMLVEHAERFGLSQLHQLRGRVGRSDQQSYCVLMASYKR
SQEAKQRLEAMARTNDGFEISETDLQIRGAGDFFGTRQSGMPDLKIADLT
EDDEILEVAREAAFALIEKDPHLRADEHERLRRRYQEDYAEHGLGFARVG
>SRU_2233 recJ, single-stranded-DNA-specific exonuclease RecJ
MLMTYRWTPRALDEPDVVPRLQRELNDLPAPLARALALREVTTLEEAKHF
FRADRSALHDPFGMAGMDAAAARLSDAIDDGTSVLVYGDYDVDGTTGTAL
FTDFLRDRGVDVSFFIPDRYEDGYGLCRRGLDAAAERGASLVVALDCGIT
AHEEAAYAQELGLDLIIADHHTPKETLPEALAVLDPKRPDDDYPFEELPG
CGLAFKLVQAVLAHRDEAPDAAYEYLDLLALSTASDIVPLYGENRVLMAE
GLEALQRSTRPGVQALADAADLDLQTVTSTGNIVFTLGPRINAAGRMEHA
SSAVELLLARSYEEAEPHAAELEQLNRERRRIDDTIEEEAVERAERQITS
RSPHALVLYDPDWHLGVIGIVASSIVERFHKPTILLTHNGEAVKGSARSI
EGINIYEALADCEDVLTQFGGHDHAAGMSLEADDIDAFRDRFDDAVGERV
TPELLTPSIKVDASVDLDTIGSVADRFWAVLKQFGPFGPANPTPVFHAED
LDVVSARTVGSDDSHLKFEVRQRDASSGQTYDAIGFGMGEKLSVLRESQD
TGTPVELLFSLEENTWNGRTTLQLKARDVRLDEA
>SRU_0800 recN, DNA repair protein RecN
MLQSLSVQDYALIKELEMEFESGLNIITGATGAGKSILIGALRMILGERA
NTDVVREGTSKAVVEGIFDDADTERIRAVLRENEIPTDPLPRVILRRRIT
ERGSRGFVNDTPATLDVMRAVAGELIDLHGQHEHQSLLHTETHLRLLDSF
GGLSGLVESYRDQRSRVAELVEEREALAARERELRQQKELYEFQIEEIDA
VDPQPGEEDELRAEQRVLENAEHLYASTKELYERLFESENALHDQLVISR
NDLQDLARIDDAFEEHVDEIESARIIVSELANFLQDYNAHVEFDPERLQD
IRERTTEIEKLKRKYGGSLEAVLEHRREIGEKYELAQDFEGNLERLDAQI
DEAKADLTDVAQRLSQKRREVATRIEDAILEELGTLGMPNSQFEVRFTRQ
EDPDGWIQPDDADAHYRAFQKGMDQVEFFISTNVGVSPMPLAEVASGGEI
SRIMLALKTILAKSERLPILVFDEIDVGISGNMARRVGESMHDLARYHQI
ITITHLPQIAALGDCHFKVEKIVEDGTTKTTIHRLDEDEQATQVASLISG
EDITDAALASARELMAAGERDE
>SRU_1176 recO, DNA repair protein RecO
MAQRSIVRTKAVVLRSIDYGETSQIVTLFTQEKGKLGVMAKGARRPKSSF
GATLQPMAYTQVVFYHKPSRTLQTLSESSHVQSFHRLREKLPTITVGLRI
VELVDALMEEEDPQPAAFALVVRALHRLNIAEARVSNLWPYVQLQLAQIL
GVAPAVDRTRVEAVTGDEGLLSLADGGVYPADGTPDQPKRASRAALRAYA
VCARADLDTVMRLTMSPAVRREVEALVRDFLRYQFDDAYPDRSRSVIAQI
EGAKPTDRAT
>SRU_0299 recQ, ATP-dependent DNA helicase RecQ
MDVTHADPTHVLQSVFGYETFRPYQEPVVQRLVDGGDALVLMPTGGGKSL
CYQIPAMVRDGPGIVVSPLISLMQDQVDALQQVGVKAAVLNSSLGRKERE
AVEHRLTAGELDLCYVAPERATRDRFKTLLSRARPSLLAIDEAHCISQWG
HDFRPEYLALADLRGDFAQIPCIAVTATADPPTQRVVLDRLGMTDEDRFV
AGFDRPNIRYVVEPKGNRPRQQLHEFIEREHPGQNGIVYCLSRNGVETTA
DWLTDHGHTAVPYHAGLSDHKRSEHQDRFLREDGLIVVATVAFGMGIDKP
DVRFVAHLDVPKTLEAYYQETGRAGRDGRPATAWMAYRRGDVVRMRQLID
DSAENDEHRWTQRHKLNALLGYCEAPDCRRKVLLNYFGEDMGGDTCGNCD
NCLRPPDTWEGTTAAQKALSCIARTGQRFGSGHVTDVLLGKDTEKIQRHD
HDTVSTYGIGADRSKAEWRSVLRQLVAKGMVEVDVMGYGALTLTEDCRPV
LKGRETVAFRDGAAASASPNTTKTATDDPLPADGPERELFEALRERRTQI
ATDQEVPPYVIFNDKTLRAMVEHRPQSKSDFRALHGVGDVKLERYGRQFL
DTIREHT
>SRU_2555 recR, recombination protein RecR
MQYTSESVETLVEQFTKLPTIGKKTARRLANYVLKMPQEEVETIANALTS
VKEDVQRCSTCYVVADQDPCPICGSDKRDASTICVVEESSDLTAIEQTNE
YRGVYHVLGGVISPLDGVGPDDLRVHELATRIDPSFEDTAADAAPEPNTT
PDGEADAEAPPSENGGADEAESGVDEVILAVNPNVEGDTTAYYISQLLEP
FDVRVTRIARGLPIGGDLEYADEATLSRALEGRGHVD
>SRU_p0001 repB, initiator replication protein RepB
MARQSLFDDQARVVKSNRLVQSKMNWTKLEHRVVAMLIAQLEKDDKEFEE
QRVYIKDIADLSGRNGKSLYDQAEEICQKLLDQKIHIRTQTDDGRRRYKG
YNCMSSCEYVEGSGYIEAKFNDDMQPFLLQLKRRFTQYNLKCFMQLSSQH
SMRIYELLKMREGIKYLRLGIEELREVLSCEHSYERFADFKRWVLERARG
ELWDKTDIYFNYQVEREGQTPVRINFVIKENDSEKEKEGGSKNEDANETL
IQSGQNGERGDIGVEGKADEGETPTFNVFAMVLDEMTQEELDTYSETHIR
EAVSSARQKVDNDRPDDGAANKAIEAYREALRRVRN
>SRU_1185 rnhA, RNase H
MEVRGFALRPPCTQGFHGAFSARSWTCPAPPRTFESIRSLFCFFGFMNEV
TIYTDGACSGNPGPGGWAAILLPDDDSDATDPLTGGEPHTTNNRMELTAA
LEALRALDDRSRVALHTDSEYLSKAFNEGWLDSWQDNNWQTSSNDDVKNQ
DLWKALLEEADRHEVDWVWVKGHADDELNIMADELAVAAMEQYK
>SRU_2372 rnhB, ribonuclease HII
MLSHERRLWADGYERVAGLDEAGRGCLAGPVVAAAVIMPPQVEITAIQDS
KALSEGQRLDARATIEDEAVAASIARCSPTEIDDRNILQAALEAMRRAAS
GCRPPPDFVLVDGNQWDRNLVDAPWPHETVVKGDAKSQSIAAASILAKTE
RDALMRDLHEAHPEYDWASNVGYPTQQHYDALREHGATPHHRQSFTLFRD
>SRU_0458 ruvA, Holliday junction DNA helicase RuvA
MIDYVSGTLVDKTTDSALVDVNGLGYRVHVPTSTYKRLPDTDEEVTLHTY
HYLREDDESLYGFATKAERTVFETMTGVSRVGPKLALSALSAMTPTELRD
HVMEGDKSRLTQISGVGTKTADRLIVELRDRLADLDVLEDTSPLSGGSDA
RAEARADALEALTELGLSKADAERSIRQVLRDNAGIQSADELVRRALKAD
QE
>SRU_1146 ruvB, Holliday junction DNA helicase RuvB
MSTSRSDALKAEADRSDNDVEKLLRPQSLDEFVGQEKIKENLNVFMKAAL
QRGETLDHVLLSGPPGLGKTTLAHIIANEMGARIRTSSGPVLEKPADIAG
VLTNLEEGDLLFIDEIHRLSSVVEEYLYSAMEDYRIDIVIDQGPNARTVQ
IDLPPFTMVGATTRKGLLTAPLRARFGIDFRYDYYTADLLQEITQRSARI
LDVETTPDGAYEIARRSRGTPRVANRLLRRTRDFAEVEGDGEITKAIADR
ALNALDVDEEGLDDMDARILLTLIDNFDGGPTGLKNLAVSVGEESGTLEE
VYEPYLIQEGFMERTPQGRVALQRAYDHFDRSSPAADQDLFDQE
>SRU_2668 ruvC, crossover junction endodeoxyribonuclease RuvC
MIILGVDPGSRATGYGLVDPSGGDEHLVAADTIRLADTDDHPTRLKQIYD
ALVDVIDAHGPDEFAVEMPVYGQNPQSMLKLGRAQAAAMMAALNRDLPVA
QYTPKEVKKSVTGNGNASKKQVGFMIESILSAREQTFAHDTADALAIALC
HGNRDAHDDGDSYTGWASFVDANPDRVSE
>SRU_0716 ssb, single-strand binding protein
MARSVNKVVLIGNLGDDPELRYTGSGTAVCNMSLATNESYTNSDGEEVQQ
TEWHDVVAWGRLGEVCNEYLERGSQVYFEGKIETNQWEDQDGNTRYSTEV
KALEATFLGEGPDGAVPGGGQPAQGQSPAPSQRRAGGQGGASGGGPPSQS
GGDGQPGSDETFEPDDDLPF
>SRU_0523 ssb, single-strand binding protein
MARGVNKVILIGNLGDDPELRYTGSGTAVCNMSLATNETYTDSDGNEVQN
TEWHDVVAWGRLGEICNEYLDKGSQVYFEGKLQTRSWEDRDNNTRYSTEV
KAQEMMFLDSNRQGGADMDGFDQTRGDESLDQTRQEQPAGSSGPQPGQQA
SSGGEDEDTFEPDDDLPF
>SRU_1118 topA, DNA topoisomerase I
MKRLVVVESPTKARTIREFLPETGYRVEASMGHIRDLPASADQIPSEYKD
EDWSRLGVKVTNGFEPLYVVPPDKKEVVRDLKQAVSDADRLYIATDEDRE
GESIGWHLIHTLDPDVPVERMVFHEITEDAIQRALDDTRDIDQHLVEAQQ
TRRILDRLVGYSISPLLWRKIKPKLSAGRVQSVAVRLLVQKERERITFVP
ATYWDLDAQLAKQGIGVEAEMTHLNEVRLASGKDFDEDTGRLKESLTEGE
DVVLLDEEQATALAEGLPETRWRIDDIKERTRTKSPFPPFITSTLQQEAN
RKLNLSSSRTMSVAQSLYENGYITYMRTDSTNLSSEAVEGARRTVAQRYG
DEYLSDGVRQYSSSDSAQEAHEAIRPAGSEMKTKDELGLSGIEAALYDLI
WKRMLATQTADAKVRYTNVYFDAEVDGDVARFRASGKRLDFPGFFRVLVE
GSEDPEAALRDQERPLPPLEVGETAAQSADDDGFQVRSVEPLGHETKPPS
RYTEASLVETLEEEGIGRPSTYASIIGTIQQRGYVRKKGSALVPTFTAFA
TNNLMETQFEPLVDVHFTAEMEDVLDDIARGRKDPTPYLRDFYKGEEGVE
TRVEQGLDDIDPKQISEMSFPDQWGEYVVRVGKYGAYVEGEMDGATVTAS
IPDDLAPGDTTEERLREILEEANRGDRVLGIHPEASLPVLLKSGPYGPYV
QLGDDEEEDDPKRVSLPPDVEPEDVDFDLGVRIVDLPRTLGEHPDTGKEI
EADIGRYGPYVRHEGTFASLQKGDDVLEVGLERALELIRRKEARNEPDRV
LGPHPGSDEPVEVWNGRYGPYVKHDGTNASLKDDQSIDDVTMDDALDLLA
EKGDEATQKVRE
>SRU_2387 uvrA, excinuclease ABC, A subunit
MPEHITLRGARENNLQAIDLDIPRNRLVVVTGLSGSGKSSLAFDTIFAEG
QRRYMESLSAYARQFLEMMERPEIDYVDGLSPVISIEQKTVSGNPRSTVG
TVTEVYDFLRLLYARAATAYSHETGNRMRQQSDDEIVDGILDFPEGTRLQ
ILAPVVRGRKGHYRELFEQTSAQGFERFRVDGEMRTYEEDMKLERYATHD
VEVVIDRLAIKDGIRSRVSQSVETALEMGGGTLIADVVDGPDGVETGDHL
FSRDLVDPETGLSYEEPSPNMFSFNTPYGACPECEGLGTAKQIAPELVVP
HPEKTINEGALAPLGEPRDIWIFNQLEAVAEAYDFDFDTPIEALSDEQLA
VILEGAGEEQFEIEYGYKGREVQYKHRFDGLYDHIWHTYEETSSSKKRRR
AESFMREMDCPACGGGRLKTESLHYRIGGKSIADLAQMDLTRLRDFVEDV
PFDTERQTRIGEPIVKEVRERLDFLIGVGVGYLTLDRPARTLSGGESQRI
RLATQVGTQLTGVLYVLDEPTIGLHPRDNDRLIESLESLRDLGNSVVVVE
HDRDMIEAADHVVDLGPGAGIHGGHVITTGPPSVLTVDPVEQTNGTAANG
AAEHEIEDNGVARQQVAERAADYDSDHYDFESFTAAYLQGERVIPLPDER
RDGTGESITLKGATGHNLKGEDVDVPLGTLICVTGVSGSGKSTLVNQTLF
PILHRHHHNAKTVPLPYDRVEGIDHVDKVIEIDQQPIGRTPRSNAATYTK
LMDYLRDLFAQLPEAEIRGYTKSRFSFNTDPGRCDKCGGTGTVTLEMNFL
PDVDVTCDACDGKRYGPETLEVEYKGKNIAEVLDMTVAEAVDFFENQPRL
VRTLKTLDAVGLGYLTLGQSSTTLSGGEAQRVKLSKELSRPGTGDTLYIL
DEPTTGMHFEDVRHLLNVLHGLVDEGNTVMVIEHNMDVIKQADHVIDLGP
EGGREGGEILFEGRPEALAEADTHTSAYLREELERTRTAQTDAEKTAPVG
ESGDGLSSGQPEPTAE
>SRU_0449 uvrA, excinuclease ABC, A subunit
MPTTERLPTQDPVIANASVTARESAQDHIVIRGARQHNLKDIDLDLPRNE
LIVFTGPSGSGKSSLCFDTIYAEGQRRYVESLSAYARQFLERMDKPEADL
ITGLAPAIAIEQKTSGKNPRSTVATQTEIYDHLRLLFARIGTTYSPVSGE
PVSRDTPHDVADRLDDALDDGTRFYLCAPIPEHADMALRDQLTSLRERGF
YRILRLPTERQAEQGQEPEILDLNQEAPSSVNHYGRARLRVLIDRLKVKT
GDADTRSRIAESVEQAFDEGDGYCTVIPAPRGGYDETAHPDASQHQGPIP
LFEFSAHFERDGMRFEEPTPQLFSFNSPVGACPTCQGFGRVPGLDEDLIV
PNKQLSIRDGALAPFRGDKWGKHFKDLIAVAADVGLDIDCPYHELADWEE
EIVWEGKDDYIGLHGFFEFLEENSYKRHYRIFRARFRGYSECPDCSGHRL
CDDALYVKVGGDAVEQKHIGEICAMTTRAARDYFEALALTDYEQEVAGRV
MEELRERSRYLVDVGLDYLTLDRLAQTLSGGETQRINLSTSLGSSLVGSL
YVLDEPTVGLHPRDNERLIDILQRLRDLGNTVLVVEHDPVTMEAADQLVD
LGPASGAFGGEVVFQGPYDEILEAEDSLTGQYLSGRKEVPVPDERRPADP
DDTLVIENARQHNLKHVDVEIPLGQIVCVTGVSGSGKSTLTNQTLFEGLH
RLKGGSGDGKVGAHDTIRGHENVDAVEMVDQSSIGRSPRSNPATYTNAFD
GIRKLFAQARQSQVHGYDRGTFSFNTKGGRCEECEGQGVVKVEMQFLADL
YLECEACNGQRYKKEVLNVTYNGKNIADVLDMTVDEAADFFEGERAIINK
LEVLQDIGLGYLTLGQPSTTLSGGEAQRIKLASHLSGRASDRTLYIFDEP
TTGLHFDDIRKLLGAFEQLVENSHSVLIIEHNLDVVKYADHVIDLGPEGG
DAGGNVVATGTPEEVAACDESHTGRFLRDVL
>SRU_1160 uvrB, excinuclease ABC, B subunit
MTEVLNDRTDQFQLESDFEPMGDQPQAIRELVDGVGRGDEHQTLLGATGT
GKTFTVANVIEEVNKPTLVMSHNKTLAAQLYGELKQFFPNNAVEYFISYY
DYYQPESYIVPNDTYIEKDVAINDRIERLRLRATSELVSGRDDVIVVASV
SCIYGLGSPAEFQKEILPLERGLEVERNDLLRRFIDLFYERNDIEFTPGT
FRVRGDVVDIFPAYREEIALRIEFWGDEIDRLALFEPESGRELEEVNQFT
LYPAQIFVTPDDRLERAIEDIKEELRWRLAVLREEGKMVEAQRLEQRTMF
DLEMMQEVGYCSGIENYSRHLTGREPGERPYCLLDYFPDDFMLVVDESHV
TIPQVRAMYNGDRQRKLKLVEHGFRLPSALDNRPLTFEEFEELTPQTIYM
SATPADYELEQSGGVFVEQVVRPTGIPDPEVDVRPTGNQVDDLMEEIRKR
AEKGERVLVTTLTKRMTEDLADYLDSYGVDVRWMHSDIDALERVDIIRGL
RLGEYDVLVGVNLLREGLDLPEVSLVAILDADQQGFLRSETSLIQTAGRA
ARNVNGEVILYADEITDAMQKMIDETERRRERQLEYNETHDVTPEPIRKS
PDEIKMGTAIADEKSEGEESGSRHHYGSPDQLSSEVADPVVEYLSEDQKE
DLVDQMREEMEEAAENLEFERAAELRDSIEELEEELAESGE
>SRU_1580 uvrC, excinuclease ABC, C subunit
MSEVLDDKPEVLVQKLDALPTDPGVYKFLDDEESVLYVGKAKNLRNRVRT
YFQQSRQRDGRIEVMVQKAVDVDIIVTDTEAEALILENNQIKELQPRYNV
NLRDDKTYPYICIKNERFPRVFKTRTVKQDGSEYFGPYADVSKMNSMMDA
IRSVFQLRTCSLDLTEEKIEAGKYDVCLQHHIDNCKAPCVGKQSEADYME
TIEQVKKLLNGQTQELMDLLKDEMQRQSDAHNFEEAARLRDQVKALKDYS
QQQKVVSQDFADRDVFALHVERDEDIGCGVLFQVREGKMIGKRHKFLRSV
EERSDAELILSLVENYYAEANFYPEEVLLSHDPNDHPAQDTHALEELLRQ
EQGHQVPIKVPQRGEKASLVRMATSNAKLQVGEWKTQQMKRERNRIPESI
KALGEALNMEAPPRRVDGIDVSHHGGKETVASCVVFTDATPRKSDYRTYK
IRSTEEGTPDDYKAMREVVRRRYRRMVEEDGPWPDLVVIDGGKGQLSSAV
EMLKEVGAFDRFPVIGLAKRLEEVYRPGDSDPVFLAKDSPALQLLQKVRD
EAHRFAVTYQRKRRKKKTLQSELLDIHGIGPKTAKKLLGEFGSAAKVKEA
DEEALAEVVGPAKAETITDYYDETEAPAPAETE
>SRU_0513 uvrd, ATP-dependent DNA helicase
MARRIVLSSDRDEPSGSTEDLTIEYAEALNEQQYAAATAGKGPLLIVAGA
GTGKTRTLIYRLAYLVETGTRPQQIVLLTFTRRAANDMTARASNLLDGRC
EKVRGGTFHAFCLEVLRQHAEALGFPRNFTVLDAADAADVLSVIRTRGEY
GDGEERFPQKNTLYSMFSSATNRDETLGETITKRYPQFTSLHAELKALRD
AYRRYKKEHGLMDFDDLLERTLELLETDDDVRHQVASRCRHVLVDEYQDT
NALQAELVKKFSSVHGNVTVVGDDAQSIYKFRGADFRNIFRFPDEFDDTE
VVKLEHNYRSTQPILDLANRVIEQAERSYDKTLFTEKTEGELPALVPAAD
GDMEARFVAEMVLRLREDGVPLSDVAVLFRSSHNAYDLEVELNQRNIPFV
KYGGMKLNEAAHIKDVLAHLKVVENPQDAASWNRALQLIHGIGPKTAQSL
IEWTTEAAEDPLTLGDGAPFSDRYAARLKQLFSTLRHVRSDDTSVTEQVE
AILDYYQPLFENKYADDHPKRAPDLEHLAGLAANHESRQRFLSSLTLDPI
ELTALDQETGEDDEPPLVLSTIHSAKGLEFHTVFLIRALDGTIPSRHALR
EPGGVDEELRLFYVAVTRAEEGLFISYPMTQYRRGQGEYMTTPSRFVEDL
PDDVLEPVQLVEEDAVDENAPDAPEGGDTLPSSRNGEAPAPPESTRDDGP
PDDPADADGLPF
>SRU_p0008 xerD, tyrosine recombinase XerD
MVSSCLATPAGKIRLVQKALGHSDLSTTMIYTHVVDEELETALKDL
>SRU_0738 xseA, exodeoxyribonuclease VII, large subunit
MLSVAELTRGLSDLVEDRYDDVWVEGELSDFTRAASGHCYFSLKDEDAQI
RCVMWKHLTQYVYFEPEEGMQVRVNGHASVYERRGDLQIQAQAMRQAGKG
AQQKAFEELKQTLQAEGLFAPERKQALPAFPDTIGVVTSGQGAAIHDIQS
GLARRFPPAEVVLCPVKVQGLDAPRAVADAVAAFNDLPADDAQRPDLLIV
GRGGGSTEDLWAFNEEVVARALDASNLPVVSAVGHESDVTIADLVADERA
ATPSAAAERVVPDRRDVADRVRALHDRLRSRVTGRLQDARQRVDALVASR
AFHAPARRLEQHRQHLDALVDRLGRGGARAVDRARTRLAHLRDRLHALDP
EQPLRRGYVHLTQDGTSVQSAESLQDGDRVRLHFQDGRRDAEVLPDDG
>SRU_0735 xseB, exodeoxyribonuclease VII, small subunit
MNKGFFEPFRLLVRPTASFQPPMPDASDAADRTFEDTLERLEDIVDTLED
DPPSLDEALDAYEEGVALANECLDRLEEAEQRVSELSID