Gene list
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COG category: Replication, recombination and repair
Organism: Salinibacter ruber DSM 13855, DSM 13855; M31
Number of genes found: 161
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| Salinibacter ruber DSM 13855, DSM 13855; M31 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | SRU_0305 | protein umuC | SubName: Full=Protein umuC; | chromosome | CDS | 407473 | 1281 | + | 0.713505 |
| NA | SRU_1545 | DNA-3-methyladenine glycosylase | RecName: Full=Putative 3-methyladenine DNA glycosylase; EC=3.2.2.-; | chromosome | CDS | 1926298 | 621 | - | 0.697262 |
| NA | SRU_1974 | hydrolase, NUDIX family protein | SubName: Full=Hydrolase, NUDIX family protein; | chromosome | CDS | 2441539 | 696 | + | 0.699713 |
| NA | SRU_2141 | ISSru2, transposase insA | SubName: Full=ISSru2, transposase insA; | chromosome | CDS | 2647549 | 279 | + | 0.541219 |
| NA | SRU_p0005 | ISSru1, transposase orfB | SubName: Full=ISSru1, transposase orfB; | pSR35 | CDS | 7538 | 417 | - | 0.618705 |
| NA | SRU_1441 | exonuclease family | SubName: Full=Exonuclease family; | chromosome | CDS | 1792197 | 1617 | + | 0.689549 |
| NA | SRU_1455 | protein kinase domain | SubName: Full=Protein kinase domain; | chromosome | CDS | 1810998 | 1950 | - | 0.717949 |
| NA | SRU_1868 | exonuclease SbcC, putative | SubName: Full=Exonuclease SbcC, putative; | chromosome | CDS | 2309553 | 3060 | - | 0.685621 |
| NA | SRU_0351 | putative DNA helicase | SubName: Full=Putative DNA helicase; | chromosome | CDS | 472071 | 2124 | - | 0.70951 |
| NA | SRU_0247 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 328638 | 630 | + | 0.674603 |
| NA | SRU_0715 | exonuclease, putative | SubName: Full=Exonuclease, putative; | chromosome | CDS | 923873 | 711 | + | 0.690577 |
| NA | SRU_0226 | IS110 family transposase | SubName: Full=IS110 family transposase; | chromosome | CDS | 296362 | 957 | - | 0.583072 |
| NA | SRU_1127 | IS5 family transposase | SubName: Full=IS5 family transposase; | chromosome | CDS | 1419624 | 396 | + | 0.593434 |
| NA | SRU_0640 | IS605 family transposase orfA | SubName: Full=IS605 family transposase orfA; | chromosome | CDS | 836430 | 402 | + | 0.534826 |
| NA | SRU_2238 | hydrolase, NUDIX family protein | SubName: Full=Hydrolase, NUDIX family protein; | chromosome | CDS | 2775561 | 921 | - | 0.701411 |
| NA | SRU_2484 | ISSru3, transposase insA | SubName: Full=ISSru3, transposase insA; | chromosome | CDS | 3087233 | 279 | - | 0.541219 |
| NA | SRU_0861 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome | CDS | 1103901 | 1830 | + | 0.70765 |
| NA | SRU_1534 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1911109 | 2181 | + | 0.664374 |
| NA | SRU_0732 | ISSru3, transposase insA | SubName: Full=ISSru3, transposase insA; | chromosome | CDS | 945504 | 279 | - | 0.541219 |
| NA | SRU_1807 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2236388 | 3222 | - | 0.704221 |
| NA | SRU_2772 | IS110 family transposase | SubName: Full=IS110 family transposase; | chromosome | CDS | 3430685 | 1005 | + | 0.593035 |
| NA | SRU_1088 | Phage integrase family protein | SubName: Full=Phage integrase family protein; | chromosome | CDS | 1361835 | 1248 | + | 0.550481 |
| NA | SRU_1483 | type II DNA topoisomerase, A subunit | SubName: Full=Type II DNA topoisomerase, A subunit; | chromosome | CDS | 1847913 | 2334 | + | 0.652956 |
| NA | SRU_0626 | Phage integrase, N-terminal SAM-like domain protein | SubName: Full=Phage integrase, N-terminal SAM-like domain protein; | chromosome | CDS | 824475 | 2064 | - | 0.48062 |
| NA | SRU_1506 | tyrosine recombinase xerC | SubName: Full=Tyrosine recombinase xerC; | chromosome | CDS | 1875379 | 936 | + | 0.647436 |
| NA | SRU_2179 | 6-O-methylguanine DNA methyltransferase, DNA binding domain subfamily | SubName: Full=6-O-methylguanine DNA methyltransferase, DNA binding domain subfamily; EC=2.1.1.63; | chromosome | CDS | 2700112 | 333 | - | 0.705706 |
| NA | SRU_0109 | ISSru3, transposase insB | SubName: Full=ISSru3, transposase insB; | chromosome | CDS | 140430 | 477 | + | 0.595388 |
| NA | SRU_2706 | ISSru3, transposase insA | SubName: Full=ISSru3, transposase insA; | chromosome | CDS | 3343843 | 279 | - | 0.541219 |
| NA | SRU_1299 | hydrolase, TatD family | SubName: Full=Hydrolase, TatD family; | chromosome | CDS | 1638051 | 789 | + | 0.629911 |
| NA | SRU_2330 | deoxyribodipyrimidine photolyase, putative | SubName: Full=Deoxyribodipyrimidine photolyase, putative; EC=4.1.99.3; | chromosome | CDS | 2904291 | 1614 | - | 0.694548 |
| NA | SRU_2442 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3050958 | 1944 | - | 0.683128 |
| NA | SRU_2315 | DNA helicase II | SubName: Full=DNA helicase II; | chromosome | CDS | 2883011 | 3255 | + | 0.722888 |
| NA | SRU_0713 | ISSru3, transposase insB | SubName: Full=ISSru3, transposase insB; | chromosome | CDS | 922494 | 477 | + | 0.595388 |
| NA | SRU_0108 | ISSru3, transposase insA | SubName: Full=ISSru3, transposase insA; | chromosome | CDS | 140188 | 279 | + | 0.541219 |
| NA | SRU_2820 | THUMP domain/methyltransferase domain protein | SubName: Full=THUMP domain/methyltransferase domain protein; | chromosome | CDS | 3482183 | 1110 | + | 0.692793 |
| NA | SRU_0192 | IS605 family transposase orfB | SubName: Full=IS605 family transposase orfB; | chromosome | CDS | 266875 | 1191 | + | 0.572628 |
| NA | SRU_p0002 | umuC protein | SubName: Full=UmuC protein; | pSR35 | CDS | 1500 | 1299 | + | 0.638953 |
| NA | SRU_1876 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2318546 | 522 | - | 0.704981 |
| NA | SRU_1505 | Phage integrase, N-terminal SAM-like domain protein | SubName: Full=Phage integrase, N-terminal SAM-like domain protein; | chromosome | CDS | 1873808 | 909 | + | 0.613861 |
| NA | SRU_1916 | OB-fold nucleic acid binding domain protein | SubName: Full=OB-fold nucleic acid binding domain protein; | chromosome | CDS | 2364216 | 3753 | - | 0.64615 |
| NA | SRU_2395 | IS605 family transposase | SubName: Full=IS605 family transposase; | chromosome | CDS | 2985809 | 1278 | + | 0.56964 |
| NA | SRU_0236 | transposase | SubName: Full=Transposase; | chromosome | CDS | 313832 | 1227 | + | 0.562347 |
| NA | SRU_1539 | putative DNA polymerase IV | RecName: Full=DNA polymerase IV; Short=Pol IV; EC=2.7.7.7; | chromosome | CDS | 1916857 | 1122 | - | 0.648841 |
| NA | SRU_0632 | IS1 family transposase insA | SubName: Full=IS1 family transposase insA; | chromosome | CDS | 831883 | 279 | + | 0.53405 |
| NA | SRU_0803 | site-specific recombinase, phage integrase family | SubName: Full=Site-specific recombinase, phage integrase family; | chromosome | CDS | 1022104 | 894 | - | 0.655481 |
| NA | SRU_0641 | IS605 family transposase orfB | SubName: Full=IS605 family transposase orfB; | chromosome | CDS | 836835 | 1134 | + | 0.557319 |
| NA | SRU_1064 | conserved hypothetical protein TIGR00250 | RecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; | chromosome | CDS | 1338851 | 432 | + | 0.703704 |
| NA | SRU_1397 | ISSru3, transposase insA | SubName: Full=ISSru3, transposase insA; | chromosome | CDS | 1749328 | 279 | + | 0.541219 |
| NA | SRU_p0013 | hypothetical protein | SubName: Full=Uncharacterized protein; | pSR35 | CDS | 14839 | 954 | - | 0.633124 |
| NA | SRU_2010 | putative transposase, orfB | SubName: Full=Putative transposase, orfB; | chromosome | CDS | 2489216 | 522 | - | 0.55364 |
| NA | SRU_2704 | ISSru3, transposase insB | SubName: Full=ISSru3, transposase insB; | chromosome | CDS | 3343403 | 477 | - | 0.595388 |
| NA | SRU_0950 | exonuclease, putative | SubName: Full=Exonuclease, putative; | chromosome | CDS | 1216622 | 750 | - | 0.698667 |
| NA | SRU_1806 | probable ATP-dependent DNA helicase | SubName: Full=Probable ATP-dependent DNA helicase; | chromosome | CDS | 2232914 | 3345 | - | 0.71151 |
| NA | SRU_0887 | integron integrase subfamily | SubName: Full=Integron integrase subfamily; | chromosome | CDS | 1134702 | 957 | + | 0.661442 |
| NA | SRU_2557 | DNA polymerase III, subunits gamma and tau, putative | SubName: Full=DNA polymerase III, subunits gamma and tau, putative; EC=2.7.7.7; | chromosome | CDS | 3178539 | 2187 | - | 0.704618 |
| NA | SRU_0718 | probable ATP-dependent DNA helicase | SubName: Full=Probable ATP-dependent DNA helicase; | chromosome | CDS | 927059 | 2568 | + | 0.701713 |
| NA | SRU_0712 | ISSru3, transposase insA | SubName: Full=ISSru3, transposase insA; | chromosome | CDS | 922252 | 279 | + | 0.541219 |
| NA | SRU_1377 | DNA-binding protein HU | SubName: Full=DNA-binding protein HU; | chromosome | CDS | 1728439 | 303 | + | 0.636964 |
| NA | SRU_0538 | ATP-dependent DNA helicase pcrA | SubName: Full=ATP-dependent DNA helicase pcrA; EC=3.6.1.-; | chromosome | CDS | 713066 | 2361 | + | 0.674291 |
| NA | SRU_0026 | putative replicative DNA helicase, intein-containing | SubName: Full=Putative replicative DNA helicase, intein-containing; | chromosome | CDS | 23412 | 2553 | - | 0.655699 |
| NA | SRU_2764 | Helicase conserved C-terminal domain protein | SubName: Full=Helicase conserved C-terminal domain protein; | chromosome | CDS | 3418701 | 1833 | - | 0.675396 |
| NA | SRU_0781 | MutT/nudix family protein | SubName: Full=MutT/nudix family protein; | chromosome | CDS | 992609 | 438 | + | 0.705479 |
| NA | SRU_0919 | putative deoxyribonuclease | SubName: Full=Putative deoxyribonuclease; | chromosome | CDS | 1176005 | 1266 | + | 0.671406 |
| NA | SRU_0191 | IS605 family transposase orfA | SubName: Full=IS605 family transposase orfA; | chromosome | CDS | 266473 | 399 | + | 0.526316 |
| NA | SRU_0071 | integrase/recombinase | SubName: Full=Integrase/recombinase; | chromosome | CDS | 77736 | 1356 | - | 0.629056 |
| NA | SRU_1888 | hydrolase, NUDIX family protein | SubName: Full=Hydrolase, NUDIX family protein; | chromosome | CDS | 2332260 | 615 | + | 0.691057 |
| NA | SRU_0059 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 56738 | 480 | + | 0.702083 |
| NA | SRU_2115 | hydrolase, NUDIX family protein | SubName: Full=Hydrolase, NUDIX family protein; | chromosome | CDS | 2615393 | 630 | - | 0.680952 |
| NA | SRU_p0011 | site-specific recombinase, phage integrase family, truncation | SubName: Full=Site-specific recombinase, phage integrase family, truncation; | pSR35 | CDS | 11163 | 576 | - | 0.604167 |
| NA | SRU_2335 | ISSru3, transposase insA | SubName: Full=ISSru3, transposase insA; | chromosome | CDS | 2910448 | 279 | + | 0.541219 |
| NA | SRU_p0031 | hypothetical protein | SubName: Full=Uncharacterized protein; | pSR35 | CDS | 29658 | 1371 | - | 0.642597 |
| NA | SRU_0219 | IS605 family transposase | SubName: Full=IS605 family transposase; | chromosome | CDS | 287207 | 1332 | + | 0.557808 |
| NA | SRU_1808 | protein parB | SubName: Full=Protein parB; | chromosome | CDS | 2239616 | 546 | - | 0.721612 |
| NA | SRU_2245 | GIY-YIG catalytic domain, putative | SubName: Full=GIY-YIG catalytic domain, putative; | chromosome | CDS | 2783283 | 303 | + | 0.633663 |
| NA | SRU_p0026 | nuclease, putative | SubName: Full=Nuclease, putative; | pSR35 | CDS | 24283 | 669 | - | 0.648729 |
| NA | SRU_2267 | ISSru2, transposase insA | SubName: Full=ISSru2, transposase insA; | chromosome | CDS | 2816729 | 279 | + | 0.541219 |
| NA | SRU_0188 | IS110 family transposase | SubName: Full=IS110 family transposase; | chromosome | CDS | 257015 | 1011 | + | 0.58457 |
| NA | SRU_0027 | uracil-DNA glycosylase, family 4 | SubName: Full=Uracil-DNA glycosylase, family 4; EC=3.2.2.-; | chromosome | CDS | 26151 | 864 | - | 0.655093 |
| NA | SRU_1575 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1957677 | 582 | + | 0.678694 |
| NA | SRU_1220 | Protein of unknown function (DUF1232) family | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1536925 | 678 | + | 0.640118 |
| NA | SRU_2610 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3238342 | 306 | - | 0.718954 |
| NA | SRU_0184 | ISSru2, transposase insA | SubName: Full=ISSru2, transposase insA; | chromosome | CDS | 253858 | 279 | + | 0.541219 |
| NA | SRU_2023 | ISSru3, transposase insA | SubName: Full=ISSru3, transposase insA; | chromosome | CDS | 2504117 | 279 | + | 0.541219 |
| NA | SRU_0046 | ATP-dependent RNA helicase | SubName: Full=ATP-dependent RNA helicase; | chromosome | CDS | 41983 | 1437 | + | 0.658316 |
| NA | SRU_1822 | conserved hypothetical protein TIGR00252 | RecName: Full=UPF0102 protein SRU_1822; | chromosome | CDS | 2255142 | 369 | - | 0.655827 |
| NA | SRU_0652 | MutS2 family protein | RecName: Full=Endonuclease MutS2; EC=3.1.-.-; | chromosome | CDS | 849703 | 2460 | + | 0.714228 |
| NA | SRU_1105 | transposase, degenerate | SubName: Full=Transposase, degenerate; | chromosome | CDS | 1392772 | 582 | + | 0.613402 |
| NA | SRU_0609 | IS5 family transposase | SubName: Full=IS5 family transposase; | chromosome | CDS | 800022 | 768 | - | 0.580729 |
| NA | SRU_1109 | ribonuclease H | SubName: Full=Ribonuclease H; | chromosome | CDS | 1397735 | 924 | - | 0.564935 |
| NA | SRU_0988 | ATPase, AAA family protein | SubName: Full=ATPase, AAA family protein; | chromosome | CDS | 1261639 | 1371 | + | 0.671043 |
| NA | SRU_0731 | ISSru3, transposase insB | SubName: Full=ISSru3, transposase insB; | chromosome | CDS | 945064 | 477 | - | 0.595388 |
| NA | SRU_0687 | nuclease SbcCD, D subunit subfamily, putative | SubName: Full=Nuclease SbcCD, D subunit subfamily, putative; | chromosome | CDS | 894181 | 1362 | + | 0.692364 |
| NA | SRU_2007 | Ser/Thr protein phosphatase family protein | SubName: Full=Ser/Thr protein phosphatase family protein; | chromosome | CDS | 2482774 | 1308 | - | 0.730122 |
| NA | SRU_0200 | IS605 family transposase | SubName: Full=IS605 family transposase; | chromosome | CDS | 274634 | 1260 | + | 0.557143 |
| NA | SRU_0610 | IS256 family transposase, truncated | SubName: Full=IS256 family transposase, truncated; | chromosome | CDS | 800947 | 468 | + | 0.559829 |
| NA | SRU_2552 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3166684 | 363 | + | 0.716253 |
| NA | SRU_2078 | conserved hypothetical protein TIGR00095 | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2572552 | 615 | - | 0.671545 |
| NA | SRU_1995 | putative DNA polymerase II | RecName: Full=DNA polymerase; EC=2.7.7.7; | chromosome | CDS | 2464166 | 3489 | + | 0.6274 |
| NA | SRU_2456 | ISSru3, transposase insB | SubName: Full=ISSru3, transposase insB; | chromosome | CDS | 3065575 | 477 | + | 0.595388 |
| NA | SRU_2024 | ISSru3, transposase insB | SubName: Full=ISSru3, transposase insB; | chromosome | CDS | 2504359 | 477 | + | 0.595388 |
| NA | SRU_0595 | Phage integrase family protein | SubName: Full=Phage integrase family protein; | chromosome | CDS | 782822 | 1404 | + | 0.626068 |
| NA | SRU_1398 | ISSru3, transposase insB | SubName: Full=ISSru3, transposase insB; | chromosome | CDS | 1749570 | 477 | + | 0.595388 |
| NA | SRU_2336 | ISSru3, transposase insB | SubName: Full=ISSru3, transposase insB; | chromosome | CDS | 2910690 | 477 | + | 0.595388 |
| NA | SRU_2483 | ISSru3, transposase insB | SubName: Full=ISSru3, transposase insB; | chromosome | CDS | 3086793 | 477 | - | 0.595388 |
| NA | SRU_1484 | type II DNA topoisomerase, B subunit | SubName: Full=Type II DNA topoisomerase, B subunit; | chromosome | CDS | 1850303 | 1932 | + | 0.648551 |
| NA | SRU_0857 | putative DNA polymerase III, delta' subunit | SubName: Full=Putative DNA polymerase III, delta subunit; | chromosome | CDS | 1099984 | 1188 | + | 0.66835 |
| NA | SRU_2183 | putative 6-O-methylguanine DNA methyltransferase family protein | SubName: Full=Putative 6-O-methylguanine DNA methyltransferase family protein; | chromosome | CDS | 2708826 | 387 | - | 0.70801 |
| NA | SRU_2013 | ISSru2, transposase insA | SubName: Full=ISSru2, transposase insA; | chromosome | CDS | 2491836 | 279 | + | 0.541219 |
| NA | SRU_1673 | ATP-dependent DNA helicase, RecQ family | SubName: Full=ATP-dependent DNA helicase, RecQ family; EC=3.6.1.-; | chromosome | CDS | 2075466 | 1950 | - | 0.706154 |
| NA | SRU_0196 | IS605 family transposase | SubName: Full=IS605 family transposase; | chromosome | CDS | 271623 | 1215 | - | 0.555556 |
| NA | SRU_2455 | ISSru3, transposase insA | SubName: Full=ISSru3, transposase insA; | chromosome | CDS | 3065333 | 279 | + | 0.541219 |
| dnaA | SRU_0001 | chromosomal replication initiator protein DnaA | RecName: Full=Chromosomal replication initiator protein DnaA; | chromosome | CDS | 2 | 1575 | + | 0.64127 |
| dnaA | SRU_1369 | chromosomal replication initiator protein DnaA | RecName: Full=Chromosomal replication initiator protein DnaA; | chromosome | CDS | 1718032 | 1695 | - | 0.670796 |
| dnaE | SRU_0979 | DNA polymerase III, alpha subunit | SubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7; | chromosome | CDS | 1247212 | 3501 | - | 0.649529 |
| dnaG | SRU_0970 | DNA primase | RecName: Full=DNA primase; EC=2.7.7.-; | chromosome | CDS | 1236378 | 1968 | + | 0.66311 |
| dnaN | SRU_0002 | DNA polymerase III, beta subunit | RecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; | chromosome | CDS | 1709 | 1134 | + | 0.634039 |
| dprA | SRU_1187 | DNA processing protein DprA | SubName: Full=DNA processing protein DprA; | chromosome | CDS | 1498326 | 1167 | + | 0.696658 |
| gyrA | SRU_2199 | DNA gyrase, A subunit | RecName: Full=DNA gyrase subunit A; EC=5.99.1.3; | chromosome | CDS | 2724446 | 2733 | + | 0.678741 |
| gyrB | SRU_2408 | DNA gyrase, B subunit | RecName: Full=DNA gyrase subunit B; EC=5.99.1.3; | chromosome | CDS | 3003154 | 1959 | - | 0.665646 |
| holA | SRU_0498 | DNA polymerase III, delta subunit | SubName: Full=DNA polymerase III, delta subunit; EC=2.7.7.7; | chromosome | CDS | 672803 | 1044 | + | 0.658046 |
| hrpB | SRU_2747 | ATP-dependent helicase HrpB | SubName: Full=ATP-dependent helicase HrpB; | chromosome | CDS | 3398905 | 2538 | - | 0.723798 |
| hup | SRU_1063 | probable DNA-binding protein HU | SubName: Full=Probable DNA-binding protein HU; | chromosome | CDS | 1338399 | 381 | + | 0.648294 |
| ligA | SRU_0888 | DNA ligase, NAD-dependent | RecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; | chromosome | CDS | 1135781 | 2073 | - | 0.703811 |
| mfd | SRU_0063 | transcription-repair coupling factor | RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; | chromosome | CDS | 61566 | 3429 | - | 0.673083 |
| mutL | SRU_1712 | DNA mismatch repair protein MutL | RecName: Full=DNA mismatch repair protein MutL; | chromosome | CDS | 2121575 | 1944 | - | 0.702675 |
| mutM | SRU_0462 | formamidopyrimidine-DNA glycosylase | SubName: Full=Formamidopyrimidine-DNA glycosylase; EC=3.2.2.23; | chromosome | CDS | 618307 | 798 | + | 0.704261 |
| mutS | SRU_1606 | DNA mismatch repair protein MutS | RecName: Full=DNA mismatch repair protein MutS; | chromosome | CDS | 1997723 | 2727 | - | 0.6718 |
| mutY | SRU_2119 | A/G-specific adenine glycosylase | SubName: Full=A/G-specific adenine glycosylase; EC=3.2.2.-; | chromosome | CDS | 2619971 | 1065 | + | 0.682629 |
| nfi | SRU_2800 | endonuclease V | RecName: Full=Endonuclease V; EC=3.1.21.7; AltName: Full=Deoxyinosine 3endonuclease; AltName: Full=Deoxyribonuclease V; | chromosome | CDS | 3457796 | 669 | - | 0.715994 |
| nth | SRU_2356 | endonuclease III | RecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; | chromosome | CDS | 2931905 | 975 | - | 0.65641 |
| phrB | SRU_1179 | deoxyribodipyrimidine photolyase | SubName: Full=Deoxyribodipyrimidine photolyase; EC=4.1.99.3; | chromosome | CDS | 1488328 | 1452 | - | 0.644628 |
| phrB | SRU_1083 | deoxyribodipyrimidine photolyase | SubName: Full=Deoxyribodipyrimidine photolyase; EC=4.1.99.3; | chromosome | CDS | 1352336 | 1392 | + | 0.663793 |
| phrB | SRU_1754 | deoxyribodipyrimidine photolyase | SubName: Full=Deoxyribodipyrimidine photolyase; EC=4.1.99.3; | chromosome | CDS | 2164382 | 1389 | - | 0.652268 |
| polA | SRU_1635 | DNA polymerase I | SubName: Full=DNA polymerase I; EC=2.7.7.7; | chromosome | CDS | 2031404 | 2781 | - | 0.658396 |
| priA | SRU_2745 | primosomal protein N' | SubName: Full=Primosomal protein N; | chromosome | CDS | 3395529 | 2478 | - | 0.717918 |
| radC | SRU_2338 | DNA repair protein RadC | RecName: Full=UPF0758 protein SRU_2338; | chromosome | CDS | 2911617 | 702 | - | 0.688034 |
| recA | SRU_1531 | recA protein | RecName: Full=Protein RecA; AltName: Full=Recombinase A; | chromosome | CDS | 1907949 | 1062 | - | 0.629002 |
| recF | SRU_0067 | DNA replication and repair protein RecF | RecName: Full=DNA replication and repair protein RecF; | chromosome | CDS | 71532 | 1239 | + | 0.705408 |
| recG | SRU_0269 | ATP-dependent DNA helicase RecG | SubName: Full=ATP-dependent DNA helicase RecG; EC=3.6.1.-; | chromosome | CDS | 361774 | 2103 | - | 0.685687 |
| recJ | SRU_2233 | single-stranded-DNA-specific exonuclease RecJ | SubName: Full=Single-stranded-DNA-specific exonuclease RecJ; EC=3.1.-.-; | chromosome | CDS | 2766776 | 1755 | - | 0.690028 |
| recN | SRU_0800 | DNA repair protein RecN | RecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; | chromosome | CDS | 1015436 | 1719 | - | 0.672484 |
| recO | SRU_1176 | DNA repair protein RecO | RecName: Full=DNA repair protein RecO; AltName: Full=Recombination protein O; | chromosome | CDS | 1485885 | 783 | + | 0.673052 |
| recQ | SRU_0299 | ATP-dependent DNA helicase RecQ | SubName: Full=ATP-dependent DNA helicase RecQ; EC=3.6.1.-; | chromosome | CDS | 395334 | 1824 | + | 0.699561 |
| recR | SRU_2555 | recombination protein RecR | RecName: Full=Recombination protein RecR; | chromosome | CDS | 3177216 | 714 | - | 0.668067 |
| repB | SRU_p0001 | initiator replication protein RepB | SubName: Full=Initiator replication protein RepB; | pSR35 | CDS | 1 | 1011 | + | 0.523244 |
| rnhA | SRU_1185 | RNase H | RecName: Full=Ribonuclease H; Short=RNase H; EC=3.1.26.4; | chromosome | CDS | 1496687 | 585 | - | 0.639316 |
| rnhB | SRU_2372 | ribonuclease HII | RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; | chromosome | CDS | 2949482 | 603 | - | 0.68325 |
| ruvA | SRU_0458 | Holliday junction DNA helicase RuvA | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; | chromosome | CDS | 615198 | 609 | + | 0.686371 |
| ruvB | SRU_1146 | Holliday junction DNA helicase RuvB | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; | chromosome | CDS | 1441721 | 1035 | - | 0.657971 |
| ruvC | SRU_2668 | crossover junction endodeoxyribonuclease RuvC | RecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; | chromosome | CDS | 3307074 | 540 | + | 0.666667 |
| ssb | SRU_0716 | single-strand binding protein | RecName: Full=Single-stranded DNA-binding protein; | chromosome | CDS | 924748 | 513 | + | 0.668616 |
| ssb | SRU_0523 | single-strand binding protein | RecName: Full=Single-stranded DNA-binding protein; | chromosome | CDS | 697955 | 507 | - | 0.633136 |
| topA | SRU_1118 | DNA topoisomerase I | RecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; | chromosome | CDS | 1407572 | 2589 | + | 0.674778 |
| uvrA | SRU_0449 | excinuclease ABC, A subunit | SubName: Full=Excinuclease ABC, A subunit; | chromosome | CDS | 601430 | 2946 | - | 0.68296 |
| uvrA | SRU_2387 | excinuclease ABC, A subunit | SubName: Full=Excinuclease ABC, A subunit; | chromosome | CDS | 2971341 | 3051 | - | 0.681088 |
| uvrB | SRU_1160 | excinuclease ABC, B subunit | RecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; | chromosome | CDS | 1459842 | 2076 | + | 0.639692 |
| uvrC | SRU_1580 | excinuclease ABC, C subunit | RecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; | chromosome | CDS | 1962016 | 1902 | + | 0.650368 |
| uvrd | SRU_0513 | ATP-dependent DNA helicase | SubName: Full=ATP-dependent DNA helicase; EC=3.6.1.-; | chromosome | CDS | 685564 | 2139 | - | 0.679289 |
| xerD | SRU_p0008 | tyrosine recombinase XerD | SubName: Full=Tyrosine recombinase XerD; | pSR35 | CDS | 9341 | 141 | - | 0.574468 |
| xseA | SRU_0738 | exodeoxyribonuclease VII, large subunit | RecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit; | chromosome | CDS | 950148 | 1197 | - | 0.721804 |
| xseB | SRU_0735 | exodeoxyribonuclease VII, small subunit | RecName: Full=Exodeoxyribonuclease 7 small subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII small subunit; | chromosome | CDS | 947618 | 270 | - | 0.62963 |
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