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2024-05-19 03:28:26

Gene list

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COG category: Replication, recombination and repair
Organism: Hahella chejuensis KCTC 2396, KCTC 2396

Number of genes found: 285

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Hahella chejuensis KCTC 2396, KCTC 2396
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA HCH_06383 Transposase and inactivated derivativeschromosome CDS6520671 399 - 0.47619
NA HCH_03608 Zn-finger domain associated with topoisomerase type Ichromosome CDS3746961 318 + 0.578616
NA HCH_03259 Transposase and inactivated derivativeschromosome CDS3354658 1035 + 0.533333
NA HCH_02488 BamHI-like site-specific methyltransferasechromosome CDS2547622 1191 + 0.40806
NA HCH_06947 conserved hypothetical proteinchromosome CDS7062970 546 + 0.587912
NA HCH_05910 Transposase and inactivated derivativeschromosome CDS6032421 888 - 0.551802
NA HCH_00620 DNA repair proteinchromosome CDS628891 441 - 0.469388
NA HCH_06339 Exonuclease IIIchromosome CDS6479002 774 - 0.528424
NA HCH_02814 conserved hypothetical proteinchromosome CDS2912057 669 + 0.532138
NA HCH_04565 group II intron-encoding maturasechromosome CDS4684237 1389 - 0.618431
NA HCH_02188 conserved hypothetical proteinchromosome CDS2245604 2853 - 0.539082
NA HCH_06189 Single-stranded DNA-binding proteinchromosome CDS6326780 633 - 0.545024
NA HCH_00555 protein containing HHH motifchromosome CDS567129 390 + 0.484615
NA HCH_06389 Site-specific recombinasechromosome CDS6525970 1368 - 0.434942
NA HCH_04705 Superfamily II DNA and RNA helicasechromosome CDS4836360 1362 + 0.566079
NA HCH_05903 Mg-dependent DNasechromosome CDS6024534 789 - 0.499366
NA HCH_01460 Transposase and inactivated derivativeschromosome CDS1457466 639 - 0.494523
NA HCH_06350 DNA polymerase Ichromosome CDS6487752 2736 + 0.557749
NA HCH_00571 N6-adenine-specific methylasechromosome CDS582169 594 - 0.545455
NA HCH_02835 Transposase and inactivated derivativeschromosome CDS2931443 540 - 0.483333
NA HCH_03684 Serine/threonine protein kinasechromosome CDS3826267 1842 - 0.553746
NA HCH_00425 Alkylated DNA repair proteinchromosome CDS432365 519 + 0.522158
NA HCH_03258 hypothetical proteinchromosome CDS3354207 417 + 0.366906
NA HCH_03001 Replicative DNA helicasechromosome CDS3103213 711 - 0.457103
NA HCH_06652 DNA G:T-mismatch repair endonucleasechromosome CDS6771507 417 - 0.527578
NA HCH_04618 predicted methylated DNA-protein cysteine methyltransferasechromosome CDS4741024 321 + 0.53271
NA HCH_04557 phage terminase, small subunit, putative, P27 familychromosome CDS4679698 477 - 0.616352
NA HCH_02447 ATPase related to the helicase subunit of the Holliday junction resolvasechromosome CDS2502536 1347 + 0.576837
NA HCH_02201 Nucleotidyltransferase/DNA polymerase involved in DNA repairchromosome CDS2267989 1299 - 0.498845
NA HCH_05625 Site-specific recombinasechromosome CDS5743484 1356 + 0.553097
NA HCH_02566 Transposase and inactivated derivativeschromosome CDS2634352 519 + 0.593449
NA HCH_03288 Transposase and inactivated derivativeschromosome CDS3380147 486 + 0.50823
NA HCH_04672 Serine/threonine protein kinasechromosome CDS4799772 2205 - 0.565533
NA HCH_06679 conserved hypothetical proteinchromosome CDS6792091 624 + 0.541667
NA HCH_04017 hypothetical proteinchromosome CDS4157516 1053 - 0.530864
NA HCH_02163 Bacterial nucleoid DNA-binding proteinchromosome CDS2215403 273 + 0.483516
NA HCH_00593 Superfamily I DNA and RNA helicasechromosome CDS599704 2331 - 0.546976
NA HCH_02575 Transposase and inactivated derivativeschromosome CDS2639799 207 - 0.541063
NA HCH_02654 Rad3-related DNA helicasechromosome CDS2720830 2157 + 0.576727
NA HCH_06696 conserved hypothetical proteinchromosome CDS6813058 2958 - 0.602096
NA HCH_03780 Transposase and inactivated derivativeschromosome CDS3910488 519 - 0.593449
NA HCH_02573 Transposase and inactivated derivativeschromosome CDS2639106 252 - 0.472222
NA HCH_05631 DNA repair proteinchromosome CDS5747721 552 + 0.536232
NA HCH_05053 Superfamily II DNA/RNA helicase, SNF2 familychromosome CDS5209399 2904 + 0.577135
NA HCH_03827 NTP pyrophosphohydrolase including oxidative damage repair enzymechromosome CDS3968755 477 - 0.534591
NA HCH_01952 Serine/threonine protein kinasechromosome CDS1988339 1770 + 0.550847
NA HCH_04254 Transposase and inactivated derivativeschromosome CDS4400969 702 + 0.52849
NA HCH_05408 DNA repair photolyasechromosome CDS5548180 1092 + 0.552198
NA HCH_02303 3-methyladenine DNA glycosylasechromosome CDS2364793 666 + 0.572072
NA HCH_00405 Integrasechromosome CDS414977 1011 + 0.430267
NA HCH_02053 conserved hypothetical proteinchromosome CDS2095058 639 + 0.524257
NA HCH_03270 Transposase and inactivated derivativeschromosome CDS3365588 531 + 0.487759
NA HCH_06545 DNA repair proteinchromosome CDS6665803 372 - 0.553763
NA HCH_00834 conserved hypothetical proteinchromosome CDS830543 786 - 0.522901
NA HCH_05052 putative exonucleasechromosome CDS5208537 693 + 0.556999
NA HCH_04706 Superfamily II DNA and RNA helicasechromosome CDS4837780 1482 - 0.544534
NA HCH_10004 predicted Rossmann fold nucleotide-binding protein involved in DNA uptakechromosome CDS6532671 702 + 0.492877
NA HCH_05641 conserved hypothetical proteinchromosome CDS5757937 570 - 0.34386
NA HCH_00601 Transposase and inactivated derivativeschromosome CDS611419 540 - 0.485185
NA HCH_05099 conserved hypothetical proteinchromosome CDS5256662 549 - 0.486339
NA HCH_03627 Superfamily II DNA/RNA helicase, SNF2 familychromosome CDS3767004 3012 + 0.435591
NA HCH_05223 Alkylated DNA repair proteinchromosome CDS5368305 612 + 0.547386
NA HCH_02816 uncharacterized protein predicted to be involved in DNA repairchromosome CDS2914497 894 + 0.49217
NA HCH_01209 protein containing bacterial pre-peptidase C-terminal domainchromosome CDS1218236 1845 + 0.544715
NA HCH_03956 Retron-type reverse transcriptasechromosome CDS4096391 1707 + 0.510252
NA HCH_02377 conserved hypothetical proteinchromosome CDS2431825 348 + 0.433908
NA HCH_03236 3-methyladenine DNA glycosylasechromosome CDS3335436 603 + 0.532338
NA HCH_02354 Transposase and inactivated derivativeschromosome CDS2415668 246 - 0.597561
NA HCH_04432 Transposase and inactivated derivativeschromosome CDS4560424 390 - 0.469231
NA HCH_05984 NTP pyrophosphohydrolase including oxidative damage repair enzymechromosome CDS6123222 486 - 0.530864
NA HCH_05385 DNA mismatch repair enzyme (predicted ATPase)chromosome CDS5520677 1839 - 0.557368
NA HCH_04124 NAD-dependent DNA ligase (contains BRCT domain type II)chromosome CDS4264976 609 - 0.469622
NA HCH_00091 group II intron-encoding maturasechromosome CDS99187 1389 + 0.617711
NA HCH_04002 Serine/threonine protein kinasechromosome CDS4137232 1728 + 0.570023
NA HCH_03471 Serine/threonine protein kinasechromosome CDS3602720 4158 - 0.524291
NA HCH_04570 Transposase and inactivated derivativeschromosome CDS4690330 654 + 0.605505
NA HCH_04648 Adenosine deaminasechromosome CDS4774406 1455 + 0.593814
NA HCH_04775 NTP pyrophosphohydrolase including oxidative damage repair enzymechromosome CDS4910812 579 + 0.566494
NA HCH_01181 Transposase and inactivated derivativeschromosome CDS1180647 399 + 0.47619
NA HCH_04166 hypothetical proteinchromosome CDS4303100 1092 - 0.441392
NA HCH_03785 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunitchromosome CDS3916889 978 - 0.481595
NA HCH_03196 Transposase and inactivated derivativeschromosome CDS3300924 216 + 0.486111
NA HCH_03289 IS116/IS110/IS902 family transposasechromosome CDS3380702 489 + 0.543967
NA HCH_06861 hypothetical proteinchromosome CDS6973049 1062 + 0.550847
NA HCH_05698 Site-specific recombinasechromosome CDS5813910 1356 + 0.559735
NA HCH_05439 predicted DNA alkylation repair enzymechromosome CDS5575601 711 + 0.556962
NA HCH_03776 hypothetical proteinchromosome CDS3906958 186 + 0.602151
NA HCH_02126 group II intron-encoding maturasechromosome CDS2177993 1389 - 0.618431
NA HCH_02819 uncharacterized protein predicted to be involved in DNA repairchromosome CDS2917032 294 + 0.5
NA HCH_01579 hypothetical proteinchromosome CDS1585434 606 + 0.544554
NA HCH_00756 conserved hypothetical proteinchromosome CDS750834 828 + 0.530193
NA HCH_05994 NTP pyrophosphohydrolase including oxidative damage repair enzymechromosome CDS6130766 648 - 0.550926
NA HCH_07038 Superfamily I DNA and RNA helicase and helicase subunitchromosome CDS7154626 4965 - 0.475932
NA HCH_10021 DNA G:T-mismatch repair endonucleasechromosome CDS5835225 423 + 0.444444
NA HCH_06331 Transposase and inactivated derivativeschromosome CDS6468801 435 + 0.558621
NA HCH_01087 hypothetical proteinchromosome CDS1085804 1308 + 0.56422
NA HCH_02852 Integrasechromosome CDS2947175 1095 + 0.516895
NA HCH_02574 Transposase and inactivated derivativeschromosome CDS2639335 372 - 0.534946
NA HCH_04814 DNA recombination-dependent growth factor Cchromosome CDS4952507 924 + 0.562771
NA HCH_02355 Transposase and inactivated derivativeschromosome CDS2416000 234 - 0.581197
NA HCH_07061 Transposase and inactivated derivativeschromosome CDS7184426 330 - 0.566667
NA HCH_03181 Serine/threonine protein kinasechromosome CDS3272167 1767 + 0.57725
NA HCH_00843 Transposase and inactivated derivativeschromosome CDS839208 399 - 0.47619
NA HCH_01909 DnaA family proteinchromosome CDS1941234 699 + 0.536481
NA HCH_06752 probable phage proteinchromosome CDS6869398 2655 + 0.537853
NA HCH_06237 protein containing OB-fold nucleic acid binding domainchromosome CDS6368749 360 + 0.527778
NA HCH_06232 conserved hypothetical proteinchromosome CDS6363699 720 - 0.445833
NA HCH_03295 conserved hypothetical proteinchromosome CDS3385338 117 - 0.538462
NA HCH_05701 DNA repair proteinchromosome CDS5815870 552 + 0.53442
NA HCH_05895 predicted endonuclease distantly related to archaeal Holliday junction resolvasechromosome CDS6018342 375 + 0.501333
NA HCH_06742 Retron-type reverse transcriptasechromosome CDS6858465 1335 - 0.629963
NA HCH_01766 conserved hypothetical proteinchromosome CDS1789912 2262 - 0.49779
NA HCH_05712 Superfamily I DNA and RNA helicasechromosome CDS5826907 1365 - 0.420513
NA HCH_04649 Methylated DNA-protein cysteine methyltransferasechromosome CDS4775853 483 + 0.561077
NA HCH_03825 NTP pyrophosphohydrolase including oxidative damage repair enzymechromosome CDS3968202 471 - 0.539278
NA HCH_01020 DNA repair proteinchromosome CDS1018126 675 - 0.534815
NA HCH_02103 Transposase and inactivated derivativeschromosome CDS2150398 474 - 0.504219
NA HCH_06395 Site-specific recombinasechromosome CDS6534682 1521 + 0.506246
NA HCH_00032 predicted Rossmann fold nucleotide-binding protein involved in DNA uptakechromosome CDS37519 1170 + 0.562393
NA HCH_00636 Serine/threonine protein kinasechromosome CDS639838 2655 - 0.548399
NA HCH_02817 RecB family exonucleasechromosome CDS2915400 615 + 0.556098
NA HCH_03782 hypothetical proteinchromosome CDS3911823 195 + 0.558974
NA HCH_01990 Micrococcal nuclease-like proteinchromosome CDS2031545 447 + 0.514541
NA HCH_06999 Superfamily II DNA/RNA helicase, SNF2 familychromosome CDS7110450 3321 + 0.527853
NA HCH_06687 predicted endonuclease containing a URI domainchromosome CDS6803229 288 - 0.472222
NA HCH_03294 Transposase and inactivated derivativeschromosome CDS3384623 654 - 0.605505
NA HCH_05756 Superfamily II DNA and RNA helicasechromosome CDS5875626 1782 - 0.561728
NA HCH_00882 Rad3-related DNA helicasechromosome CDS878421 2379 - 0.593106
NA HCH_05579 Adenosine deaminasechromosome CDS5704234 1077 + 0.622098
NA HCH_06273 DNA primase (bacterial type)chromosome CDS6409677 1803 + 0.500277
NA HCH_03092 Site-specific recombinase XerCchromosome CDS3187597 1326 - 0.573152
NA HCH_02244 hypothetical proteinchromosome CDS2318279 477 - 0.419287
NA HCH_06750 Integrasechromosome CDS6867573 1014 - 0.442801
NA HCH_00556 Bacterial nucleoid DNA-binding proteinchromosome CDS567630 276 - 0.507246
NA HCH_03218 Superfamily I DNA and RNA helicase and helicase subunitchromosome CDS3317631 5253 + 0.561774
NA HCH_01182 Transposase and inactivated derivativeschromosome CDS1181116 540 + 0.485185
NA HCH_05871 NTP pyrophosphohydrolase including oxidative damage repair enzymechromosome CDS5990283 405 - 0.528395
NA HCH_00623 Integrasechromosome CDS630653 1251 - 0.503597
NA HCH_01879 group II intron-encoding maturasechromosome CDS1914153 1389 + 0.618431
NA HCH_00114 Serine/threonine protein kinasechromosome CDS124474 1365 + 0.557509
NA HCH_01333 Transposase and inactivated derivativeschromosome CDS1346635 540 + 0.47963
NA HCH_02955 hypothetical proteinchromosome CDS3021256 192 - 0.567708
NA HCH_03466 probable phage resistance proteinchromosome CDS3593467 3684 - 0.490771
NA HCH_05081 NTP pyrophosphohydrolase containing a Zn-finger, probably nucleic-acid-bindingchromosome CDS5237446 810 - 0.561728
NA HCH_05817 Serine/threonine protein kinasechromosome CDS5930284 1740 - 0.565517
NA HCH_02855 Site-specific DNA methylasechromosome CDS2949621 1668 - 0.53717
NA HCH_00358 predicted endonuclease containing a URI domainchromosome CDS377294 318 + 0.515723
NA HCH_01987 probable phage proteinchromosome CDS2027350 1857 - 0.441572
NA HCH_05611 Transposase and inactivated derivativeschromosome CDS5735068 417 - 0.477218
NA HCH_01919 conserved hypothetical proteinchromosome CDS1950174 2397 + 0.546516
NA HCH_03267 hypothetical proteinchromosome CDS3361586 513 - 0.580897
NA HCH_00841 Transposase and inactivated derivativeschromosome CDS838598 540 - 0.485185
NA HCH_04569 Transposase and inactivated derivativeschromosome CDS4690158 111 + 0.540541
NA HCH_05002 Exonuclease Ichromosome CDS5144721 1452 - 0.566804
NA HCH_07066 Tn7-like transposition protein Bchromosome CDS7190051 2106 - 0.442545
NA HCH_02102 IS116/IS110/IS902 family transposasechromosome CDS2149837 492 - 0.54065
NA HCH_02902 hypothetical proteinchromosome CDS2979053 447 + 0.534676
NA HCH_07044 ATPase involved in DNA repairchromosome CDS7164308 1992 + 0.466365
NA HCH_00551 predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)chromosome CDS563722 477 + 0.559748
NA HCH_02100 protein containing transposase DDE domainchromosome CDS2148276 1119 + 0.594281
NA HCH_03287 Transposase and inactivated derivativeschromosome CDS3379599 552 + 0.547101
NA HCH_04096 Transposase and inactivated derivativeschromosome CDS4242907 459 - 0.488017
NA HCH_05684 Holliday junction resolvasome, endonuclease subunitchromosome CDS5800699 480 - 0.566667
NA HCH_06680 conserved hypothetical proteinchromosome CDS6792818 1182 - 0.564298
NA HCH_05032 Transposase and inactivated derivativeschromosome CDS5187128 162 - 0.469136
NA HCH_07052 Transposase and inactivated derivativeschromosome CDS7175372 150 + 0.573333
NA HCH_05359 Endonuclease Ichromosome CDS5497158 612 + 0.519608
NA HCH_02196 NTP pyrophosphohydrolase including oxidative damage repair enzymechromosome CDS2256501 582 + 0.484536
NA HCH_00081 conserved hypothetical proteinchromosome CDS83979 414 - 0.567633
NA HCH_00124 Endonuclease Ichromosome CDS137248 1620 + 0.580864
NA HCH_02202 conserved hypothetical proteinchromosome CDS2269418 681 - 0.509545
NA HCH_01325 Transposase and inactivated derivativeschromosome CDS1341869 513 - 0.604289
NA HCH_05614 Transposase and inactivated derivativeschromosome CDS5735675 399 - 0.473684
NA HCH_05719 Site-specific DNA methylasechromosome CDS5835674 984 - 0.469512
NA HCH_07062 Transposase and inactivated derivativeschromosome CDS7185015 129 - 0.596899
NA HCH_05710 Superfamily I DNA and RNA helicasechromosome CDS5823205 2028 - 0.397929
NA HCH_05682 DNA modification methylasechromosome CDS5798478 1218 - 0.587028
NA HCH_04887 Serine/threonine protein kinasechromosome CDS5021944 1293 + 0.555298
NA HCH_01378 Transposase and inactivated derivativeschromosome CDS1384779 714 - 0.477591
NA HCH_03805 Superfamily II DNA/RNA helicase, SNF2 familychromosome CDS3939473 2844 + 0.547468
NA HCH_05198 group II intron-encoding maturasechromosome CDS5343129 1389 - 0.618431
NA HCH_06756 putative exonucleasechromosome CDS6873465 570 + 0.529825
NA HCH_06374 DNA repair proteinchromosome CDS6512003 624 + 0.477564
NA HCH_04446 Mg-dependent DNasechromosome CDS4573996 783 + 0.526181
NA HCH_02787 Serine/threonine protein kinasechromosome CDS2880942 2949 + 0.568328
NA HCH_06120 hypothetical proteinchromosome CDS6265381 582 - 0.558419
NA HCH_05639 Transposase and inactivated derivativeschromosome CDS5755658 519 - 0.593449
NA HCH_06865 conserved hypothetical proteinchromosome CDS6978021 1476 + 0.561653
NA HCH_01332 Transposase and inactivated derivativeschromosome CDS1346166 399 + 0.473684
NA HCH_06010 Factor for inversion stimulation Fis, transcriptional activatorchromosome CDS6148022 309 + 0.527508
NA HCH_04242 Serine/threonine protein kinasechromosome CDS4384561 1491 - 0.538565
NA HCH_03958 Retron-type reverse transcriptasechromosome CDS4099593 1764 - 0.566327
NA HCH_01912 Uracil-DNA glycosylasechromosome CDS1943386 666 - 0.56006
NA HCH_06653 Site-specific DNA methylasechromosome CDS6771966 1215 - 0.563786
NA HCH_06727 group II intron-encoding maturasechromosome CDS6844584 1389 - 0.618431
NA HCH_05476 Transposase and inactivated derivativeschromosome CDS5606718 519 + 0.593449
NA HCH_00401 putative exonucleasechromosome CDS409542 579 - 0.528497
NA HCH_06862 Serine/threonine protein kinasechromosome CDS6974114 1815 - 0.548209
NA HCH_05237 Ribonuclease HIIchromosome CDS5381677 615 - 0.530081
NA HCH_00603 Transposase and inactivated derivativeschromosome CDS612029 399 - 0.47619
NA HCH_06382 Transposase and inactivated derivativeschromosome CDS6520061 417 - 0.47482
NA HCH_00743 Superfamily I DNA and RNA helicasechromosome CDS735065 2166 + 0.563712
NA HCH_04571 Integrasechromosome CDS4691044 480 + 0.427083
NA HCH_01630 Serine/threonine protein kinasechromosome CDS1637281 2718 + 0.593451
NA HCH_03400 Transposase and inactivated derivativeschromosome CDS3492049 519 + 0.593449
NA HCH_07034 Transposasechromosome CDS7147234 561 - 0.524064
NA HCH_03070 Transposase and inactivated derivativeschromosome CDS3164607 996 + 0.514056
NA HCH_00588 Integrasechromosome CDS595961 318 - 0.509434
NA HCH_02859 putative exonucleasechromosome CDS2952403 531 - 0.553672
cas1 HCH_02818 CRISPR-associated protein Cas1chromosome CDS2916011 1017 + 0.536873
comEA HCH_02375 DNA uptake protein and related DNA-binding proteinchromosome CDS2431294 306 - 0.437909
dinP HCH_04322 DNA polymerase IVchromosome CDS4470361 1071 + 0.547152
dnaA HCH_00002 chromosomal replication initiator protein DnaAchromosome CDS378 1404 + 0.504986
dnaB HCH_01714 replicative DNA helicasechromosome CDS1739679 1428 + 0.521008
dnaE1 HCH_01861 DNA polymerase III, alpha subunitchromosome CDS1888512 3477 + 0.566868
dnaE2 HCH_02200 DNA polymerase III, alpha subunitchromosome CDS2264875 3099 - 0.476928
dnaN HCH_00003 DNA polymerase III, beta subunitchromosome CDS1884 1104 + 0.490942
dnaQ HCH_02528 DNA polymerase III, epsilon subunitchromosome CDS2592271 723 + 0.510373
dnaX HCH_02613 DNA polymerase III, gamma/tau subunitchromosome CDS2682000 2208 + 0.591938
gyrA HCH_04983 DNA gyrase, A subunitchromosome CDS5122337 2640 - 0.535985
gyrB HCH_00008 DNA gyrase, B subunitchromosome CDS6253 2418 + 0.506617
holA HCH_05357 DNA polymerase III, delta subunitchromosome CDS5495548 1017 + 0.528024
holB HCH_02670 DNA polymerase III delta prime subunitchromosome CDS2738141 1008 + 0.55754
holC HCH_01930 DNA polymerase III, chi subunitchromosome CDS1962372 426 - 0.434272
hrpA HCH_02648 ATP-dependent helicase HrpAchromosome CDS2710099 3873 + 0.556933
hrpB HCH_05855 ATP-dependent helicase HrpBchromosome CDS5975401 2466 - 0.608272
ihfA HCH_04573 integration host factor, alpha subunitchromosome CDS4692185 303 - 0.468647
ihfB HCH_04977 integration host factor, beta subunitchromosome CDS5114855 297 - 0.468013
istA1 HCH_01179 transposase, IS21 familychromosome CDS1178163 1542 - 0.61284
istA2 HCH_05635 transposase, IS21 familychromosome CDS5749500 1542 + 0.61284
istA3 HCH_06236 transposase, IS21 familychromosome CDS6367193 1542 - 0.614137
istA4 HCH_06335 transposase, IS21 familychromosome CDS6474373 1542 - 0.61284
istB1 HCH_01178 IstB helper protein, IS21 familychromosome CDS1177396 756 - 0.60582
istB2 HCH_05636 IstB helper protein, IS21 familychromosome CDS5751053 756 + 0.60582
istB3 HCH_06235 IstB helper protein, IS21 familychromosome CDS6366426 756 - 0.60582
istB4 HCH_06334 IstB helper protein, IS21 familychromosome CDS6473606 756 - 0.60582
ligA HCH_04729 DNA ligase, NAD-dependentchromosome CDS4859300 2052 - 0.574561
mfd HCH_02683 transcription-repair coupling factorchromosome CDS2751657 3450 - 0.547246
mutM1 HCH_00567 formamidopyrimidine-DNA glycosylasechromosome CDS578015 816 - 0.54902
mutM2 HCH_02013 Formamidopyrimidine-DNA glycosylasechromosome CDS2054444 909 - 0.543454
mutS HCH_05234 DNA mismatch repair protein MutSchromosome CDS5378027 2649 + 0.546244
mutT HCH_02334 NTP pyrophosphohydrolase including oxidative damage repair enzymechromosome CDS2397745 447 - 0.541387
mutY HCH_01340 A/G-specific adenine glycosylasechromosome CDS1353732 1167 - 0.569837
nfi HCH_00812 Deoxyinosine 3'endonuclease (endonuclease V)chromosome CDS811029 510 + 0.566667
nth HCH_01887 endonuclease IIIchromosome CDS1922095 636 - 0.542453
parC HCH_05404 DNA topoisomerase IV, A subunitchromosome CDS5543242 2280 - 0.554825
parE HCH_05734 DNA topoisomerase IV, B subunitchromosome CDS5847475 2064 - 0.59157
phrB1 HCH_00062 Deoxyribodipyrimidine photolyasechromosome CDS64758 1476 + 0.600271
phrB2 HCH_01735 Deoxyribodipyrimidine photolyasechromosome CDS1759978 1446 - 0.549793
polB HCH_01557 DNA polymerase IIchromosome CDS1561512 2520 + 0.553571
priA HCH_05977 primosomal protein N'chromosome CDS6113938 2241 + 0.539938
recA HCH_05232 recA proteinchromosome CDS5376305 1038 - 0.523121
recB HCH_00223 exodeoxyribonuclease V, beta subunitchromosome CDS231157 3546 - 0.595319
recC HCH_00224 exodeoxyribonuclease V, gamma subunitchromosome CDS234699 3222 - 0.617318
recD HCH_00222 exodeoxyribonuclease V, alpha subunitchromosome CDS229223 1938 - 0.610423
recF HCH_00007 Recombinational DNA repair ATPase (RecF pathway)chromosome CDS5102 1128 + 0.470745
recG HCH_06309 ATP-dependent DNA helicase RecGchromosome CDS6446878 2067 - 0.604741
recJ HCH_01781 single-stranded-DNA-specific exonuclease RecJchromosome CDS1805663 1659 + 0.548523
recN HCH_01222 DNA repair protein RecNchromosome CDS1230670 1665 - 0.547147
recO HCH_01803 DNA repair protein RecOchromosome CDS1824885 717 + 0.53417
recQ HCH_00158 ATP-dependent DNA helicase RecQchromosome CDS170675 1812 + 0.563466
recR HCH_02615 recombination protein RecRchromosome CDS2684559 606 + 0.556106
rep HCH_06427 ATP-dependent DNA helicase Repchromosome CDS6563796 2019 + 0.568103
rhlB HCH_02291 ATP-dependent RNA helicasechromosome CDS2354853 1182 + 0.563452
rnhA HCH_02527 Ribonuclease HIchromosome CDS2591814 447 + 0.550336
rnt HCH_04993 ribonuclease Tchromosome CDS5136003 657 + 0.557078
ruvA HCH_04923 Holliday junction DNA helicase RuvAchromosome CDS5054021 615 - 0.536585
ruvB HCH_04922 Holliday junction DNA helicase RuvBchromosome CDS5052962 1005 - 0.556219
ruvC HCH_04924 crossover junction endodeoxyribonuclease RuvCchromosome CDS5054748 519 - 0.574181
sbcC HCH_00898 ATPase involved in DNA repairchromosome CDS897087 3690 + 0.562602
sbcD HCH_00897 DNA repair exonucleasechromosome CDS895774 1317 + 0.552771
tag HCH_02047 3-methyladenine DNA glycosylasechromosome CDS2089788 594 + 0.555556
tatD HCH_02416 Mg-dependent DNasechromosome CDS2469801 798 + 0.525063
topA HCH_04752 DNA topoisomerase Ichromosome CDS4888600 2655 - 0.538983
ung HCH_01784 uracil-DNA glycosylasechromosome CDS1810182 762 + 0.532808
uvrA HCH_06191 excinuclease ABC, A subunitchromosome CDS6328954 2826 + 0.514862
uvrB HCH_04971 excinuclease ABC, B subunitchromosome CDS5108864 2013 - 0.53999
uvrC HCH_04042 excinuclease ABC, C subunitchromosome CDS4187931 1839 + 0.570419
uvrD HCH_02006 UvrD/REP helicase family proteinchromosome CDS2045095 1896 - 0.5327
xerC HCH_00300 tyrosine recombinase XerCchromosome CDS321177 906 + 0.567329
xerD HCH_01776 tyrosine recombinase XerDchromosome CDS1799187 855 + 0.512281
xseA HCH_04944 exodeoxyribonuclease VII, large subunitchromosome CDS5075753 1335 + 0.590262
xseB HCH_05864 exodeoxyribonuclease VII, small subunitchromosome CDS5984372 279 + 0.512545
xth HCH_02757 exodeoxyribonuclease IIIchromosome CDS2835797 813 - 0.549815
yscO HCH_05108 putative type III secretion protein YscOchromosome CDS5264027 474 + 0.567511