Gene list
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COG category: Replication, recombination and repair
Organism: Pseudomonas putida KT2440, KT2440
Number of genes found: 256
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| Pseudomonas putida KT2440, KT2440 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | PP3979 | ISPpu14, transposase Orf1 | SubName: Full=ISPpu14, transposase Orf1; | chromosome | CDS | 4486395 | 321 | + | 0.573209 |
| NA | PP5187 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 5916934 | 1368 | + | 0.663012 |
| NA | PP4791 | ISPpu9, transposase | SubName: Full=ISPpu9, transposase; | chromosome | CDS | 5453340 | 1329 | + | 0.5538 |
| NA | PP1356 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1546142 | 354 | - | 0.652542 |
| NA | PP3985 | ISPpu13, transposase Orf2 | SubName: Full=ISPpu13, transposase Orf2; | chromosome | CDS | 4493707 | 1533 | - | 0.589693 |
| NA | PP2273 | DNA polymerase | SubName: Full=DNA polymerase; | chromosome | CDS | 2595114 | 2088 | + | 0.608716 |
| NA | PP1846 | group II intron-encoding maturase | SubName: Full=Group II intron-encoding maturase; | chromosome | CDS | 2069624 | 1422 | + | 0.601969 |
| NA | PP2091 | serine/threonine-protein kinase, putative | SubName: Full=Serine/threonine-protein kinase, putative; | chromosome | CDS | 2382223 | 1671 | - | 0.670257 |
| NA | PP3500 | ISPpu14, transposase Orf2 | SubName: Full=ISPpu14, transposase Orf2; | chromosome | CDS | 3969680 | 336 | + | 0.622024 |
| NA | PP3536 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4008079 | 1089 | - | 0.502296 |
| NA | PP2976 | Tn4652, transposase subunit A | SubName: Full=Tn4652, transposase subunit A; | chromosome | CDS | 3376570 | 312 | + | 0.63141 |
| NA | PP3118 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3526787 | 1419 | + | 0.673714 |
| NA | PP4766 | ATP-dependent RNA helicase, DEAD box family | SubName: Full=ATP-dependent RNA helicase, DEAD box family; | chromosome | CDS | 5426769 | 1332 | - | 0.647147 |
| NA | PP0705 | DNA-3-methyladenine glycosylase | SubName: Full=DNA-3-methyladenine glycosylase; | chromosome | CDS | 818845 | 627 | + | 0.663477 |
| NA | PP3966 | ISPpu14, transposase Orf1 | SubName: Full=ISPpu14, transposase Orf1; | chromosome | CDS | 4475930 | 321 | - | 0.573209 |
| NA | PP4420 | transposase, OrfB | SubName: Full=Transposase, OrfB; | chromosome | CDS | 5014541 | 810 | + | 0.558025 |
| NA | PP3868 | group II intron-encoding maturase | SubName: Full=Group II intron-encoding maturase; | chromosome | CDS | 4391591 | 1422 | - | 0.599859 |
| NA | PP5396 | ISPpu14, transposase Orf3 | SubName: Full=ISPpu14, transposase Orf3; | chromosome | CDS | 6152929 | 1536 | - | 0.591146 |
| NA | PP0649 | MutT/nudix family protein | SubName: Full=MutT/nudix family protein; | chromosome | CDS | 757920 | 411 | + | 0.49635 |
| NA | PP4437 | ISPpu14, transposase Orf1 | SubName: Full=ISPpu14, transposase Orf1; | chromosome | CDS | 5033243 | 321 | + | 0.573209 |
| NA | PP4444 | transposase family protein | SubName: Full=Transposase family protein; | chromosome | CDS | 5038453 | 255 | + | 0.584314 |
| NA | PP2146 | helicase, SNF2/RAD54 family | SubName: Full=Helicase, SNF2/RAD54 family; | chromosome | CDS | 2447762 | 2001 | - | 0.642679 |
| NA | PP3501 | ISPpu14, transposase Orf3 | SubName: Full=ISPpu14, transposase Orf3; | chromosome | CDS | 3970079 | 1536 | + | 0.587891 |
| NA | PP2971 | IS1246, transposase | SubName: Full=IS1246, transposase; | chromosome | CDS | 3372839 | 843 | - | 0.600237 |
| NA | PP1642 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1837378 | 672 | + | 0.619048 |
| NA | PP3987 | site-specific recombinase, phage integrase family | SubName: Full=Site-specific recombinase, phage integrase family; | chromosome | CDS | 4495690 | 960 | + | 0.542708 |
| NA | PP4980 | ATP-dependent RNA helicase, DEAD box family | RecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; | chromosome | CDS | 5672752 | 1881 | + | 0.654439 |
| NA | PP1552 | phage replication protein, putative | SubName: Full=Phage replication protein, putative; | chromosome | CDS | 1751590 | 705 | + | 0.656738 |
| NA | PP2134 | ISPpu10, transposase | SubName: Full=ISPpu10, transposase; | chromosome | CDS | 2435454 | 966 | + | 0.575569 |
| NA | PP2297 | integrative genetic element Ppu40, integrase | SubName: Full=Integrative genetic element Ppu40, integrase; | chromosome | CDS | 2624995 | 825 | + | 0.596364 |
| NA | PP4318 | ISPpu8, transposase | SubName: Full=ISPpu8, transposase; | chromosome | CDS | 4908305 | 1302 | + | 0.574501 |
| NA | PP0638 | ISPpu15, transposase Orf1 | SubName: Full=ISPpu15, transposase Orf1; | chromosome | CDS | 746515 | 357 | - | 0.557423 |
| NA | PP1702 | conserved hypothetical protein | RecName: Full=Recombination-associated protein RdgC; | chromosome | CDS | 1897288 | 921 | - | 0.618892 |
| NA | PP3586 | ISPpu9, transposase | SubName: Full=ISPpu9, transposase; | chromosome | CDS | 4074082 | 1329 | - | 0.5538 |
| NA | PP4746 | ISPpu15, transposase Orf1 | SubName: Full=ISPpu15, transposase Orf1; | chromosome | CDS | 5403341 | 360 | - | 0.555556 |
| NA | PP2841 | site-specific recombinase, phage integrase family | SubName: Full=Site-specific recombinase, phage integrase family; | chromosome | CDS | 3245743 | 879 | + | 0.641638 |
| NA | PP3181 | site-specific recombinase, phage integrase family | SubName: Full=Site-specific recombinase, phage integrase family; | chromosome | CDS | 3605808 | 951 | - | 0.656151 |
| NA | PP2937 | integrase, putative | SubName: Full=Integrase, putative; | chromosome | CDS | 3340857 | 420 | - | 0.588095 |
| NA | PP0565 | IPP isomerase type 1 family protein | SubName: Full=IPP isomerase type 1 family protein; | chromosome | CDS | 657658 | 534 | + | 0.640449 |
| NA | PP3087 | excinuclease ABC, A subunit, putative | SubName: Full=Excinuclease ABC, A subunit, putative; | chromosome | CDS | 3474193 | 2517 | - | 0.655542 |
| NA | PP2977 | Tn4652, transposase subunit B | SubName: Full=Tn4652, transposase subunit B; | chromosome | CDS | 3376878 | 906 | + | 0.573951 |
| NA | PP5397 | ISPpu14, transposase Orf2 | SubName: Full=ISPpu14, transposase Orf2; | chromosome | CDS | 6154528 | 336 | - | 0.627976 |
| NA | PP3150 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3567441 | 1998 | + | 0.636136 |
| NA | PP3680 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4182219 | 2004 | + | 0.553892 |
| NA | PP4996 | conserved hypothetical protein TIGR00250 | RecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; | chromosome | CDS | 5693261 | 426 | + | 0.652582 |
| NA | PP1868 | ATP-dependent RNA helicase, DEAD box family | RecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; | chromosome | CDS | 2090672 | 1680 | + | 0.643452 |
| NA | PP3912 | DNA-cytosine methyltransferase | SubName: Full=DNA-cytosine methyltransferase; | chromosome | CDS | 4420249 | 1662 | + | 0.647413 |
| NA | PP3889 | phage integrase, putative | SubName: Full=Phage integrase, putative; | chromosome | CDS | 4406543 | 1299 | - | 0.645881 |
| NA | PP3791 | site-specific recombinase, phage integrase family | SubName: Full=Site-specific recombinase, phage integrase family; | chromosome | CDS | 4320136 | 627 | - | 0.535885 |
| NA | PP2982 | Tn4652, cointegrate resolution protein T, putative | SubName: Full=Tn4652, cointegrate resolution protein T, putative; | chromosome | CDS | 3380326 | 999 | + | 0.602603 |
| NA | PP4409 | site-specific recombinase, phage integrase family | SubName: Full=Site-specific recombinase, phage integrase family; | chromosome | CDS | 5002214 | 1431 | + | 0.438155 |
| NA | PP3498 | ISPpu11, transposase | SubName: Full=ISPpu11, transposase; | chromosome | CDS | 3967990 | 1059 | + | 0.582625 |
| NA | PP2707 | exodeoxyribonuclease III, putative | SubName: Full=Exodeoxyribonuclease III, putative; | chromosome | CDS | 3097634 | 798 | + | 0.621554 |
| NA | PP1105 | DNA ligase, ATP-dependent, putative | SubName: Full=DNA ligase, ATP-dependent, putative; | chromosome | CDS | 1262746 | 1659 | - | 0.643761 |
| NA | PP1118 | recombinase-related protein | SubName: Full=Recombinase-related protein; | chromosome | CDS | 1281215 | 1692 | - | 0.535461 |
| NA | PP1541 | methyltransferase, putative | SubName: Full=Methyltransferase, putative; | chromosome | CDS | 1743287 | 921 | - | 0.641694 |
| NA | PP1937 | helicase, putative | SubName: Full=Helicase, putative; | chromosome | CDS | 2189200 | 3189 | + | 0.53904 |
| NA | PP4446 | group II intron-encoding maturase, putative | SubName: Full=Group II intron-encoding maturase, putative; | chromosome | CDS | 5039380 | 1122 | - | 0.558824 |
| NA | PP3114 | ISPpu13, transposase Orf2 | SubName: Full=ISPpu13, transposase Orf2; | chromosome | CDS | 3523285 | 1533 | + | 0.589693 |
| NA | PP1921 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2166934 | 1164 | + | 0.502577 |
| NA | PP2218 | ISPpu8, transposase | SubName: Full=ISPpu8, transposase; | chromosome | CDS | 2529277 | 1302 | + | 0.573733 |
| NA | PP3119 | DNA polymerase III, alpha subunit, putative | RecName: Full=Error-prone DNA polymerase; EC=2.7.7.7; | chromosome | CDS | 3528181 | 3102 | + | 0.656351 |
| NA | PP4768 | exonuclease | SubName: Full=Exonuclease; | chromosome | CDS | 5429216 | 612 | - | 0.647059 |
| NA | PP1865 | ISPpu8, transposase | SubName: Full=ISPpu8, transposase; | chromosome | CDS | 2085883 | 1302 | + | 0.574501 |
| NA | PP3691 | DNA helicase-related protein | SubName: Full=DNA helicase-related protein; | chromosome | CDS | 4201148 | 6624 | - | 0.573068 |
| NA | PP0650 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 758358 | 111 | - | 0.576577 |
| NA | PP3793 | transposase family protein | SubName: Full=Transposase family protein; | chromosome | CDS | 4322362 | 981 | + | 0.561672 |
| NA | PP5398 | ISPpu14, transposase Orf1 | SubName: Full=ISPpu14, transposase Orf1; | chromosome | CDS | 6154860 | 321 | - | 0.557632 |
| NA | PP4442 | ISPpu14, transposase Orf2 | SubName: Full=ISPpu14, transposase Orf2; | chromosome | CDS | 5036508 | 336 | + | 0.627976 |
| NA | PP2276 | phage exonuclease, putative | SubName: Full=Phage exonuclease, putative; | chromosome | CDS | 2597776 | 600 | + | 0.583333 |
| NA | PP0972 | conserved hypothetical protein | RecName: Full=UPF0213 protein PP_0972; | chromosome | CDS | 1111880 | 318 | + | 0.632075 |
| NA | PP0531 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 616548 | 1104 | + | 0.550725 |
| NA | PP4443 | ISPpu14, transposase Orf3 | SubName: Full=ISPpu14, transposase Orf3; | chromosome | CDS | 5036907 | 1536 | + | 0.591146 |
| NA | PP1062 | MutT/nudix family protein | SubName: Full=MutT/nudix family protein; | chromosome | CDS | 1217093 | 414 | + | 0.671498 |
| NA | PP3113 | ISPpu13, transposase Orf1 | SubName: Full=ISPpu13, transposase Orf1; | chromosome | CDS | 3522907 | 360 | + | 0.555556 |
| NA | PP3029 | DNA cytosine methyltransferase family protein | SubName: Full=DNA cytosine methyltransferase family protein; | chromosome | CDS | 3415408 | 1830 | - | 0.638251 |
| NA | PP1260 | ISPpu9, transposase | SubName: Full=ISPpu9, transposase; | chromosome | CDS | 1440326 | 1329 | + | 0.5538 |
| NA | PP4812 | DNA-3-methyladenine glycosylase, putative | RecName: Full=Putative 3-methyladenine DNA glycosylase; EC=3.2.2.-; | chromosome | CDS | 5475097 | 669 | + | 0.648729 |
| NA | PP5114 | conserved hypothetical protein TIGR00095 | RecName: Full=Ribosomal RNA small subunit methyltransferase D; EC=2.1.1.171; | chromosome | CDS | 5835204 | 603 | + | 0.674959 |
| NA | PP3831 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4356630 | 1023 | + | 0.630499 |
| NA | PP5146 | (di)nucleoside polyphosphate hydrolase, putative | RecName: Full=RNA pyrophosphohydrolase; EC=3.6.1.-; AltName: Full=(Di)nucleoside polyphosphate hydrolase; | chromosome | CDS | 5872666 | 480 | - | 0.6 |
| NA | PP3820 | group II intron-encoding maturase | SubName: Full=Group II intron-encoding maturase; | chromosome | CDS | 4347212 | 1422 | - | 0.600563 |
| NA | PP0640 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 749677 | 1185 | - | 0.439662 |
| NA | PP4024 | ISPpu15, transposase Orf1 | SubName: Full=ISPpu15, transposase Orf1; | chromosome | CDS | 4536285 | 360 | + | 0.555556 |
| NA | PP1624 | group II intron-encoding maturase | SubName: Full=Group II intron-encoding maturase; | chromosome | CDS | 1820234 | 1422 | + | 0.601266 |
| NA | PP0635 | group II intron-encoding maturase | SubName: Full=Group II intron-encoding maturase; | chromosome | CDS | 741898 | 1422 | + | 0.599859 |
| NA | PP2825 | integrase, putative | SubName: Full=Integrase, putative; | chromosome | CDS | 3224000 | 468 | - | 0.606838 |
| NA | PP5290 | ISPpu10, transposase | SubName: Full=ISPpu10, transposase; | chromosome | CDS | 6038006 | 966 | - | 0.575569 |
| NA | PP4937 | toluene tolerance protein | SubName: Full=Toluene tolerance protein; | chromosome | CDS | 5618678 | 675 | + | 0.598518 |
| NA | PP1133 | ISPpu9, transposase | SubName: Full=ISPpu9, transposase; | chromosome | CDS | 1296811 | 1329 | + | 0.5538 |
| NA | PP1990 | ISPpu8, transposase | SubName: Full=ISPpu8, transposase; | chromosome | CDS | 2256641 | 1302 | + | 0.573733 |
| NA | PP2114 | ISPpu8, transposase | SubName: Full=ISPpu8, transposase; | chromosome | CDS | 2413154 | 1302 | + | 0.574501 |
| NA | PP3986 | ISPpu13, transposase Orf1 | SubName: Full=ISPpu13, transposase Orf1; | chromosome | CDS | 4495258 | 357 | - | 0.557423 |
| NA | PP4438 | ISPpu14, transposase Orf2 | SubName: Full=ISPpu14, transposase Orf2; | chromosome | CDS | 5033560 | 336 | + | 0.622024 |
| NA | PP1555 | phage integrase, putative | SubName: Full=Phage integrase, putative; | chromosome | CDS | 1753027 | 1272 | + | 0.639937 |
| NA | PP3172 | group II intron-encoding maturase | SubName: Full=Group II intron-encoding maturase; | chromosome | CDS | 3594018 | 1422 | - | 0.601266 |
| NA | PP3026 | phage recombinase, putative | SubName: Full=Phage recombinase, putative; | chromosome | CDS | 3412988 | 1626 | + | 0.567651 |
| NA | PP1116 | site-specific recombinase, resolvase family | SubName: Full=Site-specific recombinase, resolvase family; | chromosome | CDS | 1276657 | 711 | - | 0.530239 |
| NA | PP1125 | helicase, putative | SubName: Full=Helicase, putative; | chromosome | CDS | 1286616 | 2145 | + | 0.639627 |
| NA | PP0637 | ISPpu15, transposase Orf2 | SubName: Full=ISPpu15, transposase Orf2; | chromosome | CDS | 744964 | 1533 | - | 0.587084 |
| NA | PP5086 | thermonuclease family protein | SubName: Full=Thermonuclease family protein; | chromosome | CDS | 5809457 | 768 | - | 0.617188 |
| NA | PP3381 | ISPpu9, transposase | SubName: Full=ISPpu9, transposase; | chromosome | CDS | 3826645 | 1329 | - | 0.5538 |
| NA | PP1252 | group II intron-encoding maturase | SubName: Full=Group II intron-encoding maturase; | chromosome | CDS | 1429961 | 1422 | + | 0.600563 |
| NA | PP3965 | ISPpu14, transposase Orf2 | SubName: Full=ISPpu14, transposase Orf2; | chromosome | CDS | 4475598 | 336 | - | 0.633929 |
| NA | PP3882 | phage terminase, small subunit, putative | SubName: Full=Phage terminase, small subunit, putative; | chromosome | CDS | 4403111 | 468 | - | 0.613248 |
| NA | PP2501 | phage integrase, putative | SubName: Full=Phage integrase, putative; | chromosome | CDS | 2847234 | 1410 | - | 0.578723 |
| NA | PP1967 | deoxyribonuclease, TatD family | SubName: Full=Deoxyribonuclease, TatD family; | chromosome | CDS | 2228862 | 783 | + | 0.650064 |
| NA | PP1931 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2177762 | 1437 | + | 0.555324 |
| NA | PP1668 | DnaA family protein | SubName: Full=DnaA family protein; | chromosome | CDS | 1864663 | 708 | + | 0.635593 |
| NA | PP5176 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 5903181 | 555 | + | 0.551351 |
| NA | PP3499 | ISPpu14, transposase Orf1 | SubName: Full=ISPpu14, transposase Orf1; | chromosome | CDS | 3969363 | 321 | + | 0.573209 |
| NA | PP3681 | helicase, putative | SubName: Full=Helicase, putative; | chromosome | CDS | 4184219 | 1659 | + | 0.55877 |
| NA | PP2522 | ISPpu8, transposase | SubName: Full=ISPpu8, transposase; | chromosome | CDS | 2869389 | 1302 | + | 0.573733 |
| NA | PP4564 | lipoprotein, putative | SubName: Full=Lipoprotein, putative; | chromosome | CDS | 5183862 | 861 | + | 0.622532 |
| NA | PP2839 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3241921 | 2289 | + | 0.644823 |
| NA | PP1813 | ComEA-related protein | SubName: Full=ComEA-related protein; | chromosome | CDS | 2039896 | 339 | + | 0.619469 |
| NA | PP0526 | ISPpu10, transposase | SubName: Full=ISPpu10, transposase; | chromosome | CDS | 611102 | 966 | + | 0.575569 |
| NA | PP4029 | NADH pyrophosphatase, putative | RecName: Full=NADH pyrophosphatase; EC=3.6.1.22; | chromosome | CDS | 4539451 | 831 | - | 0.636582 |
| NA | PP4532 | ATP-dependent RNA helicase, DEAD box family | SubName: Full=ATP-dependent RNA helicase, DEAD box family; | chromosome | CDS | 5145429 | 1323 | - | 0.619048 |
| NA | PP5050 | ISPpu10, transposase | SubName: Full=ISPpu10, transposase; | chromosome | CDS | 5757002 | 966 | + | 0.575569 |
| NA | PP2311 | hydrolase, TatD family | SubName: Full=Hydrolase, TatD family; | chromosome | CDS | 2640780 | 798 | - | 0.655388 |
| NA | PP4459 | transposase, putative | SubName: Full=Transposase, putative; | chromosome | CDS | 5061322 | 1098 | + | 0.562842 |
| NA | PP2570 | ISPpu9, transposase | SubName: Full=ISPpu9, transposase; | chromosome | CDS | 2937723 | 1329 | - | 0.5538 |
| NA | PP3989 | DNA-cytosine methyltransferase | SubName: Full=DNA-cytosine methyltransferase; | chromosome | CDS | 4500014 | 1047 | - | 0.456542 |
| NA | PP1653 | ISPpu10, transposase | SubName: Full=ISPpu10, transposase; | chromosome | CDS | 1847276 | 966 | + | 0.575569 |
| NA | PP3260 | DNA ligase, ATP-dependent, putative | SubName: Full=DNA ligase, ATP-dependent, putative; | chromosome | CDS | 3693663 | 2502 | - | 0.626299 |
| NA | PP3964 | ISPpu14, transposase Orf3 | SubName: Full=ISPpu14, transposase Orf3; | chromosome | CDS | 4473999 | 1536 | - | 0.587891 |
| NA | PP4919 | MutT/nudix family protein | SubName: Full=MutT/nudix family protein; | chromosome | CDS | 5591248 | 630 | - | 0.620635 |
| NA | PP2981 | Tn4652, cointegrate resolution protein S | SubName: Full=Tn4652, cointegrate resolution protein S; | chromosome | CDS | 3379174 | 972 | - | 0.597737 |
| NA | PP3980 | ISPpu14, transposase Orf2 | SubName: Full=ISPpu14, transposase Orf2; | chromosome | CDS | 4486712 | 336 | + | 0.622024 |
| NA | PP1250 | group II intron-encoding maturase | SubName: Full=Group II intron-encoding maturase; | chromosome | CDS | 1426101 | 1422 | + | 0.601266 |
| NA | PP3920 | phage integrase, putative | SubName: Full=Phage integrase, putative; | chromosome | CDS | 4426365 | 1050 | + | 0.593333 |
| NA | PP3981 | ISPpu14, transposase Orf3 | SubName: Full=ISPpu14, transposase Orf3; | chromosome | CDS | 4487111 | 1536 | + | 0.587891 |
| NA | PP3678 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4180132 | 1464 | + | 0.434426 |
| NA | PP1962 | site-specific recombinase, phage integrase family | SubName: Full=Site-specific recombinase, phage integrase family; | chromosome | CDS | 2222615 | 1929 | - | 0.489373 |
| NA | PP3679 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4181658 | 324 | - | 0.518519 |
| NA | PP4013 | MutT/nudix family protein | SubName: Full=MutT/nudix family protein; | chromosome | CDS | 4524568 | 441 | + | 0.662132 |
| NA | PP0791 | deoxyribonuclease, TatD family | SubName: Full=Deoxyribonuclease, TatD family; | chromosome | CDS | 907432 | 777 | - | 0.664093 |
| NA | PP4441 | ISPpu14, transposase Orf1 | SubName: Full=ISPpu14, transposase Orf1; | chromosome | CDS | 5036191 | 321 | + | 0.557632 |
| NA | PP4092 | ISPpu15, transposase Orf1 | SubName: Full=ISPpu15, transposase Orf1; | chromosome | CDS | 4627518 | 360 | - | 0.55 |
| NA | PP3893 | phage DNA helicase, putative | SubName: Full=Phage DNA helicase, putative; | chromosome | CDS | 4408914 | 1398 | - | 0.625179 |
| NA | PP0568 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 661033 | 456 | + | 0.587719 |
| NA | PP4445 | transposase, IS3 family | SubName: Full=Transposase, IS3 family; | chromosome | CDS | 5038698 | 759 | + | 0.583663 |
| NA | PP3610 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4101748 | 765 | + | 0.648366 |
| NA | PP2387 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2725570 | 1083 | - | 0.65097 |
| NA | PP2493 | RadC family protein | SubName: Full=RadC family protein; | chromosome | CDS | 2842070 | 549 | - | 0.571949 |
| NA | PP2975 | transposase family protein | SubName: Full=Transposase family protein; | chromosome | CDS | 3376156 | 267 | + | 0.580524 |
| NA | PP2565 | helicase, putative | SubName: Full=Helicase, putative; | chromosome | CDS | 2927058 | 2145 | + | 0.649883 |
| NA | PP4025 | ISPpu15, transposase Orf2 | SubName: Full=ISPpu15, transposase Orf2; | chromosome | CDS | 4536663 | 1533 | + | 0.587084 |
| NA | PP4002 | ATPase, AAA family | SubName: Full=ATPase, AAA family; | chromosome | CDS | 4510462 | 1326 | - | 0.653846 |
| NA | PP4091 | ISPpu15, transposase Orf2 | SubName: Full=ISPpu15, transposase Orf2; | chromosome | CDS | 4625967 | 1533 | - | 0.585127 |
| NA | PP4439 | ISPpu14, transposase Orf3 | SubName: Full=ISPpu14, transposase Orf3; | chromosome | CDS | 5033959 | 1536 | + | 0.587891 |
| NA | PP2495 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2843633 | 1005 | - | 0.61393 |
| NA | PP3502 | ISPpu10, transposase | SubName: Full=ISPpu10, transposase; | chromosome | CDS | 3971994 | 966 | + | 0.575569 |
| NA | PP2270 | DNA primase/helicase | SubName: Full=DNA primase/helicase; | chromosome | CDS | 2591620 | 1635 | + | 0.570031 |
| NA | PP4603 | ISPpu9, transposase | SubName: Full=ISPpu9, transposase; | chromosome | CDS | 5222966 | 1329 | - | 0.5538 |
| NA | PP1324 | conserved hypothetical protein TIGR00252 | RecName: Full=UPF0102 protein PP_1324; | chromosome | CDS | 1509374 | 375 | - | 0.616 |
| NA | PP4968 | DNA ligase, NAD-dependent, putative | RecName: Full=DNA ligase B; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)] B; | chromosome | CDS | 5660371 | 1701 | + | 0.649618 |
| NA | PP4599 | ISPpu10, transposase | SubName: Full=ISPpu10, transposase; | chromosome | CDS | 5219099 | 966 | + | 0.575569 |
| NA | PP1532 | phage integrase, putative | SubName: Full=Phage integrase, putative; | chromosome | CDS | 1738082 | 1107 | - | 0.604336 |
| NA | PP4419 | transposase, OrfA | SubName: Full=Transposase, OrfA; | chromosome | CDS | 5014188 | 309 | + | 0.572816 |
| NA | PP4745 | ISPpu15, transposase Orf2 | SubName: Full=ISPpu15, transposase Orf2; | chromosome | CDS | 5401790 | 1533 | - | 0.587084 |
| NA | PP1453 | MutT/nudix family protein | SubName: Full=MutT/nudix family protein; | chromosome | CDS | 1659887 | 600 | + | 0.603333 |
| PP0014 | transposase, putative | SubName: Full=Transposase, putative; | chromosome | CDS | 17133 | 2034 | + | 0.535398 | |
| PP0020 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 24695 | 876 | + | 0.539954 | |
| PP0069 | smf protein | SubName: Full=Smf protein; | chromosome | CDS | 79246 | 1098 | + | 0.661202 | |
| PP0099 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 103841 | 1059 | + | 0.622285 | |
| PP0116 | lipoprotein, putative | SubName: Full=Lipoprotein, putative; | chromosome | CDS | 122250 | 708 | - | 0.628531 | |
| PP0334 | ISPpu11, transposase | SubName: Full=ISPpu11, transposase; | chromosome | CDS | 400413 | 1059 | + | 0.585458 | |
| PP0345 | heptose kinase WapP, putative | SubName: Full=Heptose kinase WapP, putative; | chromosome | CDS | 418217 | 735 | + | 0.628571 | |
| PP0346 | heptose kinase WapQ, putative | SubName: Full=Heptose kinase WapQ, putative; | chromosome | CDS | 418948 | 753 | + | 0.657371 | |
| PP0347 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 419700 | 1443 | + | 0.643105 | |
| PP0353 | exonuclease | SubName: Full=Exonuclease; | chromosome | CDS | 429668 | 711 | - | 0.656821 | |
| ada | PP0706 | adaptive response regulator protein | SubName: Full=Adaptive response regulator protein; | chromosome | CDS | 819519 | 1053 | + | 0.65717 |
| algX | PP1282 | alginate biosynthesis protein AlgX | RecName: Full=Alginate biosynthesis protein AlgX; AltName: Full=Probable alginate O-acetyltransferase AlgX; EC=2.3.1.-; Flags: Precursor; | chromosome | CDS | 1464176 | 1440 | - | 0.634028 |
| alkB | PP3400 | alkylated DNA repair protein AlkB | SubName: Full=Alkylated DNA repair protein AlkB; | chromosome | CDS | 3852610 | 648 | + | 0.683642 |
| crc | PP5292 | catabolite repression control protein | SubName: Full=Catabolite repression control protein; | chromosome | CDS | 6039987 | 780 | + | 0.597436 |
| dbpA | PP4952 | ATP-dependent RNA helicase DbpA | SubName: Full=ATP-dependent RNA helicase DbpA; | chromosome | CDS | 5641825 | 1386 | + | 0.660173 |
| dinP | PP1203 | DNA-damage-inducible protein P | RecName: Full=DNA polymerase IV; Short=Pol IV; EC=2.7.7.7; | chromosome | CDS | 1381248 | 1065 | + | 0.616901 |
| dnaA | chromosomal replication initiator protein DnaA | RecName: Full=Chromosomal replication initiator protein DnaA; | chromosome | CDS | 9542 | 1521 | + | 0.583169 | |
| dnaB | PP4873 | replicative DNA helicase | SubName: Full=Replicative DNA helicase; | chromosome | CDS | 5541298 | 1398 | - | 0.610157 |
| dnaE | PP1606 | DNA polymerase III, alpha subunit | SubName: Full=DNA polymerase III, alpha subunit; | chromosome | CDS | 1800013 | 3525 | + | 0.62156 |
| dnaG | DNA primase | RecName: Full=DNA primase; EC=2.7.7.-; | chromosome | CDS | 473001 | 1983 | - | 0.641957 | |
| dnaN | DNA polymerase III, beta subunit | RecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; | chromosome | CDS | 11103 | 1104 | + | 0.586957 | |
| dnaQ | PP4141 | DNA polymerase III, epsilon subunit | SubName: Full=DNA polymerase III, epsilon subunit; | chromosome | CDS | 4678699 | 759 | - | 0.642951 |
| dnaX | PP4269 | DNA polymerase III, gamma and tau subunits | SubName: Full=DNA polymerase III, gamma and tau subunits; | chromosome | CDS | 4853024 | 2076 | - | 0.643545 |
| endA-1 | PP2451 | endonuclease I | SubName: Full=Endonuclease I; | chromosome | CDS | 2798042 | 693 | - | 0.619048 |
| endA-2 | PP3375 | endonuclease I | SubName: Full=Endonuclease I; | chromosome | CDS | 3819907 | 966 | + | 0.622153 |
| fis | PP4821 | DNA-binding protein Fis | SubName: Full=DNA-binding protein Fis; | chromosome | CDS | 5483082 | 321 | + | 0.588785 |
| gyrA | PP1767 | DNA gyrase, subunit A | RecName: Full=DNA gyrase subunit A; EC=5.99.1.3; | chromosome | CDS | 1971069 | 2772 | + | 0.630231 |
| gyrB | DNA gyrase, subunit B | RecName: Full=DNA gyrase subunit B; EC=5.99.1.3; | chromosome | CDS | 13330 | 2421 | + | 0.574556 | |
| hepA | PP1145 | RNA polymerase-associated protein HepA | RecName: Full=RNA polymerase-associated protein RapA; EC=3.6.4.-; AltName: Full=ATP-dependent helicase HepA; | chromosome | CDS | 1311808 | 2847 | - | 0.654022 |
| holA | PP4796 | DNA polymerase III, delta subunit | SubName: Full=DNA polymerase III, delta subunit; | chromosome | CDS | 5459580 | 1038 | + | 0.655106 |
| holB | PP1966 | DNA polymerase III, delta prime subunit | SubName: Full=DNA polymerase III, delta prime subunit; | chromosome | CDS | 2227845 | 987 | + | 0.64539 |
| holC | PP0979 | DNA polymerase III, chi subunit | SubName: Full=DNA polymerase III, chi subunit; | chromosome | CDS | 1118284 | 429 | - | 0.622378 |
| hrpA | PP4546 | ATP-dependent helicase HrpA | SubName: Full=ATP-dependent helicase HrpA; | chromosome | CDS | 5163972 | 3906 | - | 0.643113 |
| hrpB | PP4772 | ATP-dependent helicase HrpB | SubName: Full=ATP-dependent helicase HrpB; | chromosome | CDS | 5432733 | 2529 | - | 0.674575 |
| hupA | PP5313 | DNA-binding protein HU-alpha | SubName: Full=DNA-binding protein HU-alpha; | chromosome | CDS | 6061059 | 300 | - | 0.58 |
| hupB | PP2303 | DNA-binding protein HU-beta | SubName: Full=DNA-binding protein HU-beta; | chromosome | CDS | 2633082 | 273 | + | 0.589744 |
| hupN | PP0975 | DNA-binding protein HU, form N | SubName: Full=DNA-binding protein HU, form N; | chromosome | CDS | 1113522 | 282 | + | 0.570922 |
| ihfA | PP2471 | integration host factor, alpha subunit | RecName: Full=Integration host factor subunit alpha; Short=IHF-alpha; | chromosome | CDS | 2816247 | 303 | + | 0.584158 |
| ihfB | PP1773 | integration host factor, beta subunit | RecName: Full=Integration host factor subunit beta; Short=IHF-beta; | chromosome | CDS | 1981358 | 303 | + | 0.587459 |
| ligA | PP4274 | DNA ligase, NAD-dependent | RecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; | chromosome | CDS | 4858718 | 2331 | - | 0.646075 |
| mfd | PP2148 | transcription-repair coupling factor | RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; | chromosome | CDS | 2451666 | 3450 | - | 0.651884 |
| mutL | PP4896 | DNA mismatch repair protein MutL | RecName: Full=DNA mismatch repair protein MutL; | chromosome | CDS | 5565583 | 1899 | - | 0.647183 |
| mutM | PP5125 | formamidopyrimidine-DNA glycosylase | RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase MutM; Short=AP lyase MutM; EC=4.2.99.18; | chromosome | CDS | 5846010 | 813 | - | 0.646986 |
| mutS | PP1626 | DNA mismatch repair protein MutS | RecName: Full=DNA mismatch repair protein MutS; | chromosome | CDS | 1822676 | 2574 | - | 0.654235 |
| mutY | A/G specific adenine glycosylase | SubName: Full=A/G specific adenine glycosylase; | chromosome | CDS | 344533 | 1068 | - | 0.667603 | |
| nth | PP1092 | endonuclease III | RecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; | chromosome | CDS | 1250077 | 639 | - | 0.600939 |
| nudE | ADP compound hydrolase | SubName: Full=ADP compound hydrolase; | chromosome | CDS | 314603 | 567 | + | 0.650794 | |
| ogt | PP3017 | methylated-DNA--protein-cysteinemethyltransferase | RecName: Full=Methylated-DNA--protein-cysteine methyltransferase; EC=2.1.1.63; AltName: Full=6-O-methylguanine-DNA methyltransferase; AltName: Full=O-6-methylguanine-DNA-alkyltransferase; | chromosome | CDS | 3405551 | 501 | + | 0.648703 |
| parC | PP4912 | DNA topoisomerase IV, A subunit | RecName: Full=DNA topoisomerase 4 subunit A; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit A; | chromosome | CDS | 5583469 | 2259 | - | 0.629039 |
| parE | PP4915 | DNA topoisomerase IV, B subunit | RecName: Full=DNA topoisomerase 4 subunit B; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit B; | chromosome | CDS | 5587239 | 1905 | - | 0.631496 |
| phrB | PP0739 | deoxyribodipyrimidine photolyase | SubName: Full=Deoxyribodipyrimidine photolyase; | chromosome | CDS | 857379 | 1443 | - | 0.616078 |
| polA | DNA polymerase I | SubName: Full=DNA polymerase I; | chromosome | CDS | 127522 | 2748 | + | 0.64083 | |
| polB | PP2393 | DNA polymerase II | RecName: Full=DNA polymerase; EC=2.7.7.7; | chromosome | CDS | 2730661 | 2361 | + | 0.641677 |
| priA | PP5088 | primosomal protein N` | SubName: Full=Primosomal protein N; | chromosome | CDS | 5810664 | 2220 | + | 0.668468 |
| radC | PP5284 | DNA repair protein RadC | RecName: Full=UPF0758 protein PP_5284; | chromosome | CDS | 6032863 | 681 | - | 0.604993 |
| recA | PP1629 | recA protein | RecName: Full=Protein RecA; AltName: Full=Recombinase A; | chromosome | CDS | 1827143 | 1068 | + | 0.592697 |
| recB | PP4673 | exodeoxyribonuclease V, beta subunit | SubName: Full=Exodeoxyribonuclease V, beta subunit; | chromosome | CDS | 5300096 | 3675 | - | 0.649524 |
| recC | PP4674 | exodeoxyribonuclease V, gamma subunit | SubName: Full=Exodeoxyribonuclease V, gamma subunit; | chromosome | CDS | 5303767 | 3483 | - | 0.637669 |
| recD | PP4672 | exodeoxyribonuclease V, alpha subunit | SubName: Full=Exodeoxyribonuclease V, alpha subunit; | chromosome | CDS | 5298024 | 2076 | - | 0.657514 |
| recF | DNA replication and repair protein RecF | RecName: Full=DNA replication and repair protein RecF; | chromosome | CDS | 12222 | 1104 | + | 0.588768 | |
| recG | PP5310 | ATP-dependent DNA helicase RecG | SubName: Full=ATP-dependent DNA helicase RecG; | chromosome | CDS | 6056795 | 2079 | + | 0.658971 |
| recJ | PP1477 | single-stranded-DNA-specific exonuclease RecJ | SubName: Full=Single-stranded-DNA-specific exonuclease RecJ; | chromosome | CDS | 1681478 | 1710 | + | 0.654386 |
| recN | PP4729 | DNA repair protein RecN | RecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; | chromosome | CDS | 5378414 | 1674 | + | 0.653525 |
| recO | PP1435 | DNA repair protein RecO | RecName: Full=DNA repair protein RecO; AltName: Full=Recombination protein O; | chromosome | CDS | 1635820 | 684 | + | 0.637427 |
| recQ | PP4516 | ATP-dependent DNA helicase RecQ | SubName: Full=ATP-dependent DNA helicase RecQ; | chromosome | CDS | 5129254 | 2148 | - | 0.651304 |
| recR | PP4267 | recombination protein RecR | RecName: Full=Recombination protein RecR; | chromosome | CDS | 4851726 | 603 | - | 0.660033 |
| rep | PP5264 | ATP-dependent DNA helicase Rep | SubName: Full=ATP-dependent DNA helicase Rep; | chromosome | CDS | 6011140 | 2010 | + | 0.624876 |
| rhlB | PP1295 | ATP-dependent RNA helicase RhlB | RecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; | chromosome | CDS | 1480293 | 1197 | - | 0.627402 |
| rnhA | PP4142 | ribonuclease HI | RecName: Full=Ribonuclease HI; Short=RNase HI; EC=3.1.26.4; | chromosome | CDS | 4679508 | 447 | - | 0.615213 |
| rnhB | PP1605 | ribonuclease HII | RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; | chromosome | CDS | 1799203 | 624 | + | 0.621795 |
| rnt | PP1085 | ribonuclease T | RecName: Full=Ribonuclease T; EC=3.1.13.-; AltName: Full=Exoribonuclease T; Short=RNase T; | chromosome | CDS | 1243808 | 612 | - | 0.620915 |
| ruvA | PP1216 | Holliday junction DNA helicase RuvA | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; | chromosome | CDS | 1393648 | 618 | + | 0.62945 |
| ruvB | PP1217 | Holliday junction DNA helicase RuvB | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; | chromosome | CDS | 1394262 | 1047 | + | 0.645654 |
| ruvC | PP1215 | crossover junction endodeoxyribonuclease RuvC | RecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; | chromosome | CDS | 1393014 | 525 | + | 0.653333 |
| sbcB | PP1365 | exodeoxyribonuclease I | RecName: Full=Exodeoxyribonuclease I; EC=3.1.11.1; | chromosome | CDS | 1553925 | 1434 | + | 0.598326 |
| sbcC | PP2024 | exonuclease SbcC | SubName: Full=Exonuclease SbcC; | chromosome | CDS | 2296474 | 3645 | - | 0.659808 |
| sbcD | PP2025 | exonuclease SbcD | SubName: Full=Exonuclease SbcD; | chromosome | CDS | 2300115 | 1239 | - | 0.656174 |
| ssb | single-stranded DNA-binding protein | RecName: Full=Single-stranded DNA-binding protein; Short=SSB; | chromosome | CDS | 571027 | 546 | + | 0.630037 | |
| tag | DNA-3-methyladenine glycosidase I | SubName: Full=DNA-3-methyladenine glycosidase I; | chromosome | CDS | 72932 | 552 | + | 0.605072 | |
| tnpA | PP2964 | Tn4652, transposase | SubName: Full=Tn4652, transposase; | chromosome | CDS | 3366692 | 3015 | + | 0.582421 |
| topA | PP2139 | DNA topoisomerase I | RecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; | chromosome | CDS | 2440860 | 2610 | + | 0.616858 |
| topB | PP4019 | DNA topoisomerase III | RecName: Full=DNA topoisomerase; EC=5.99.1.2; | chromosome | CDS | 4530160 | 1962 | + | 0.66055 |
| ung | PP1413 | uracil-DNA glycosylase | RecName: Full=Uracil-DNA glycosylase; Short=UDG; EC=3.2.2.27; | chromosome | CDS | 1612200 | 693 | + | 0.614719 |
| uvrA | excinuclease ABC, A subunit | RecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; | chromosome | CDS | 566659 | 2835 | - | 0.615873 | |
| uvrB | PP1974 | excinuclease ABC, B subunit | RecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; | chromosome | CDS | 2234887 | 2016 | + | 0.636409 |
| uvrC | PP4098 | excinuclease ABC, C subunit | RecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; | chromosome | CDS | 4633283 | 1824 | - | 0.622807 |
| uvrD | PP5352 | DNA helicase II | SubName: Full=DNA helicase II; | chromosome | CDS | 6100839 | 2187 | + | 0.629172 |
| waaP | lipopolysaccharide core biosynthesis protein WaaP | SubName: Full=Lipopolysaccharide core biosynthesis protein WaaP; | chromosome | CDS | 417411 | 807 | + | 0.643123 | |
| xerC | PP5230 | integrase/recombinase XerC | RecName: Full=Tyrosine recombinase XerC; | chromosome | CDS | 5963902 | 900 | + | 0.646667 |
| xerD | PP1468 | integrase/recombinase XerD | RecName: Full=Tyrosine recombinase XerD; | chromosome | CDS | 1672953 | 897 | + | 0.653289 |
| xseA | PP1027 | exodeoxyribonuclease VII, large subunit | RecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit; | chromosome | CDS | 1171671 | 1380 | - | 0.675362 |
| xseB | PP0529 | exodeoxyribonuclease VII, small subunit | RecName: Full=Exodeoxyribonuclease 7 small subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit; | chromosome | CDS | 615241 | 243 | - | 0.633745 |
| xthA | PP2890 | exodeoxyribonuclease III | SubName: Full=Exodeoxyribonuclease III; | chromosome | CDS | 3287297 | 813 | - | 0.627306 |
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