Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View as list

# Thiomicrospira denitrificans ATCC 33889, ATCC 33889

>Tmden_0130 Site-specific DNA-methyltransferase (adenine-specific)
MNYIGSKYKLSAFLEDEIRAAVGGSLSDKVFCDMFAGTGVVGRIFKQHVK
SVISNDIEDYSYVLNKNYIQNYAQLQDNESYIKELNELLLREDGFIYNHY
CLGSGSGRQYFSDENGKKIDTIRLKIEELKRSKKIDDNMYYFLLASLIES
ADKVANTASMYAAFLKTLKKPAQRKLVLEPAYFEQSHNGHVVYQEDSNSL
IKKIKGDILYLDPPYNHRQYGANYHILNTIALYDEFVPKGKTGIRVYNRS
MYCKKNRAIKSFEELIRDANFKYIFLSYNNEGIMSRDEVKSIMSKYGKYD
LKIKEHKRFKASNALSKKHKTDSTDEYLHILQKDGF
>Tmden_0910 DNA polymerase III, alpha subunit
MSPQPFTHLHLHTEYSLLDGANKLTNLVKQVKELGMTSVAMTDHGNMFGA
IDFYQQMRAAGIKPIIGMEGYIHNGGSMDDKSSKQRFHICLFAKNQKGYE
NLMYLSSKAFIEGFYYFPRINKNELRAHSEGLICTSACLQGEVNWHLNLS
NERNVKNGALGYDGAKAVALEYKEIFGDDFYLELMRHGIGDQLFIDEQVL
KLSKELDIKVVATNDTHYTFAEDAQYHEAFMCIGMNKLYDDPNRMRHSVH
EFYLKSPAQMAMLFADIPEAIEHTQEIVEKCNLELKLGDPVPPNFKFSAE
YARNDGLEINGSDKNEIDAEYFVYRCKIGLEHRLAHVAEEKHQEYRDRLD
FEMNVINSMKFPGYMLIVWDFVKVAKEKGIAVGPGRGSAAGSLVAYSLEI
TDIDPMKYDLLFERFLNPERVSMPDIDMDFMQARRGEVIDYVVEKYGRNQ
VAQIITFGSLLAKGVIRDVARVLDMPLSEADKMAKLVPDELGITLNGRTK
NGEFIAGAFQKEPKLKELIDSDANAARVWEFAKKLEGLKRNSGIHAAGVV
ISNEELWKKTPIYKPSGEDVFVTQYSLNYLEDVDLIKFDFLGLKTLDVID
NAIKLIKFRYNKDVIWHEIDENDPKVYDVIRGGNTVGMFQIESSGMQDLN
KQLKPDSFEDLIAVLALYRPGPMESGMLKSFIERKHGREKIEYTFDSMEP
ILKNTYGVIVYQEQVMQIVQTVGGFSLGYSDIIRRSMGKKKDMSVYNDEF
AKGAQSQGLDYAEASKLFDIIEKFAGYGFNKSHSAAYAMITFQTAWLKTY
YPNEFMAALLTSDKDNTDKVVRYIDETKRMGIELSPPDICDSQLEFSAIT
KDNREIVLFGLGAIKGVGEAAVLSILETRADGGEFKSLEDFVNRIEPSKV
NKRVVESIIKAGGFDRFGFSRKALLDQIEKIVDTAKDASMAKKNAVGSLF
GDDSEITSVELKLSNSPEYELKEILEFEKETIGFYISGHPLDEFRDKLDE
LDYTLSSELESVKDGTYAIFIGKIEEIVKKTSKKGSQFGIVNLMDFHGNI
ELMLFSDKVDELQSMNLNEPIAFKVKVTHTDMFTRTSVSKIMTLKEAKKE
TQKTKKEVREAPLEPQEPINLAIRLDTNMRVLEDLYQLIRQNSGNRELKI
TIISKLQNIVIESAIRVDSKIITLLEGNESVDILVS
>Tmden_1146 Superfamily II DNA and RNA helicases-like
MSEKSIKTTKKYYDYVSVGNRTAQMAYFVQQHDKNRMFEELLKTLQNMQI
IVLVKSKRNADEIMRYLNTKEIKSISVHGNHRVAQIEDAQKSFNSKETKI
LITTDRILEKLTPMEVHVVVNYDLPLEASDYFKALLLVDEIGQSISLIDP
EDEGMLATIELMMKCEMAEVEMKHFEHTARETTTPKERINKPRHKKVEQR
AKKKAEIKSKWVPSK
>Tmden_0881 hypothetical protein
MKMFSLLFVPLLSFSLEFNDAFDRALELSATLKAKEQSILASRQNTLSEA
TYKNPILSIGLNDMLLNNNFFRRDAEAMQTQFIGITQEFETFGKLDLKEA
ILRADTLILEYELEDLRLDLYKKMALKVEEISTSTSLLEFLEEKKSNLSL
LLKYSEASINIVDAFKVSVELQKKIFAVEDKILETKEKLEAYKNEFKYLS
NQDFSSINQAQIEDYFLEENIKKSPKYKIYEIKAKQLDLNSRLEERKKYS
NVSVGVTYNHRQNYDDYLSVSASFALPIYGIEEAKVQKTRHLSAENLQKE
QNYMLFAVTVFQTNAKRVEYLKKRIKNLDDILYKYKELNRYDKSNITNSV
TLEKNIENENLLLDLEIEKLKYNLEKSSALLELFYITSGSVK
>Tmden_0527 Holliday junction resolvase YqgF
MKYIAIDLGLKRIGLAYSAHKDLVTPLKAVERKNRDQAARDVKKTLIEWE
VDAVVVGIPLGGSSEDEMRRRVAHFMNLVAFEGEIFYQDESNSSIEAESM
MRGEIKYIRDGRIDSISAMIILQRYLRQKC
>Tmden_2002 RecA DNA recombination protein
MDANKQKSLDLAMKQIDKAFGKGALMRLGDKEIMPIESISTGSLGLDLAL
GIGGIPQGRVVEIYGPESSGKTTLALQITAECQKAGGVCAFIDAEHALDV
GYAKNLGVDVDNLLVSQPDYGEQALDIVETIARSGAIDLIVIDSVAALTP
KSEIEGEMSDQNVGVQARLMSKALRKLTGILHKMNCTVIFINQIRMKIGM
MGYGSPETTTGGNALKFYASVRIDVRRIASLKQGESQIGNRVKAKVIKNK
VAPPFRQAEFDIMFGEGISKEGELVDYGVKLDIIDKSGAWFSYGETKLGQ
GRENVKAKFMEDKVLAHEIEEKIKAAMGLGDLMTMDSLDIEDVDL
>Tmden_1084 ATPase
MIERFYLKDYLSFKEVELELKSGLVVFTGPSGSGKSILMGSILSSFGSTS
CEASLCESSVAWELNGEEYGIESDDINVFKHIKKEKSRYFINNQSISKKA
MSELSSNYLRHLSLRDFSDFDNENLLNIIDSRMGLKNAEIQRVKSEYKEL
FLEHKRVKKELLSIEDEQKKIVELKEFASYEIKKIDTINPKISEDIELLE
IKKELSKKEKVLKSLSSADAIFEHEHAVFSALDLLDKDGSFFSDAMNELR
ALLESAQERFSMLEEIDVEEVLNRIEELGELKRRYGSIEEALIYKQEKIQ
ELQKYENIEFTKGDLEARVKELDKQVVDLASKLSLARYSEIDSFNKELNK
YLKDLYLRDALVEINESEFSAFGKDEITIKLNSTDLQKISTGEFNRLRLA
ILALKSETMSKDGGVLILDEIDANLSGEESMSVAKVLKQLSKHFQIFVIS
HQPQLTSMGDQHFLVYKEGDESLVKELDFERRVEEIARIISGESITQEAR
GFAKELLNLQIRE
>Tmden_2081 RecJ exonuclease
MSLFLKKLRFDDIPTLSKSSIFELLSQRFQSQEKKLSHIPDPSLLHDAPK
AAKKIADAIRENKKITLVGDYDVDGVSATAIMVDFFRQIPYPLEAVIPNR
FSDGYGVSPHLLERIDTDLIITVDNGITALEAAEICAQRGIELIITDHHT
PLTTLPHAYAIINPKLSACSYPFQEICGAQVAWLLLALLKKELNLNIDMR
SFLDILCIAIIADIMPLTDINRPLVKDGLKVLMSSNRASCVIIRDFLNKK
NISSEDIAFQIAPRINSAGRLEDASIALEFLTAQTLNKAYMQFEILNSLN
ESRRELEAEATKEALSIANGNDKVIVVAKEEWHEGVVGIVAARVAEHYTR
PTIVLTLENGVAKGSARSVGNVNIHKLIEENSHFLRKFGGHKMAAGLTLN
EKDIDAFRVAINESASKLSLDDFLSLDEVIGVVPSNQIDLELLALLESFE
PYGEANKRPLFLIRDASILEVKTFGKDSSHSKVKIMQSNEESSILELIQF
KKILNLSTADKLTCSYRVVKNEFNSKISAQLIIDKIY
>Tmden_0959 Phage integrase
MMKKQKSVKYIYQDVRFRIIERSGHWNLDFFIDNKRQRRSTSLKANSDNL
LIIKKEIIPELMLGLTGANIALEEEFDDPKDMTVEEFGIKSINSNKPNIK
PHVYERKMAAFKNYVVPYFGKTKISAIKPMDIQDWQNRLLTTLTPSSAQK
YRSIFYNILQDAFINEIIVKNPMQLVKAPKQKSKQKTLFDEEEDVMPFNN
AEIKLILEDTQLFEHNKNFYKLMLFTGMRPGEAVALRWQDILFDKKQIKI
MQTRVAGKDGTPKTMSSMRYVDILPQTLEVLLSQQKLTGDKEYLFYTRSG
KRYFSHDTLAASFKRLLTRNKIKERVLYNLRHTFASQMISQGVDIVWVSK
TLGHKDVSITLSTYTKFIQEDEATRFQKLEKFGTIFDTLANS
>Tmden_1633 Phage integrase
MALKPAGGRYEGVWINELKNGNIAYYINYRDEHGKPVKKKVGVKTKQSNF
TVKDAYDRLIQAKHHLMTGEESPFKSQRAKKFTFEDAWLAYYEWAKVNKK
TYISDEQYYRLHIAPTFANKDIKSIKSKDIEQFKQLYTSKGYAAQSVKHY
IGLMRHIINYAIKNDLIKNYANPISGGKVKLPTIDNARQAFLSKEQARVI
LDELLQYENPQLYQLTILLLYTGARFSEVASLTWNNINFETNMIYFKATK
NGNARWVFMNELVKEVIEQLKADKNNNLIIANTKGKQMERMLHSWQIVVD
NIIDENKEADAKQRVTVHSLRHTHASWLAMAGLDILHIKEQLGHKTLEMT
MRYSHLIPNKRHEATELL
>Tmden_1335 conserved hypothetical protein
MKIIFSLLFSIYLLSAQLVVVTNKNSELNTIPKEIIQYIYLAKIDKVEDI
KVKPIISDDKNLHSKFCNTILCKSESQYNSYWARLVFTGRKPIAKRLGWQ
EVISKLKELNTIAYIDKKDLREEWKIIYEEN
>Tmden_0963 Uracil-DNA glycosylase superfamily
MKSFQNLLLLENLYRLRALGFEYIDQFSINQKTQNSKPLTINELSKEVST
CYLCDLSKSRTQSMSGYGNSNADVMIIDYSVSLGEDNTNSYYCGRSGDIL
KNMIENVLELKIEDVYFTHAIKCKPLNSKTPSESEWDSCKNYLFSQIEFV
KPKVVVTLGKDAYAKVTSENDNFQNVRGHVIDFKSYKLVPIYHPNYLLRN
PDDKKIAFNDLKTIKSLLK
>Tmden_1790 Exonuclease
MAKRYIILDTETTGIGEEDRVIQLGFIVLGEREIEVQNEFFSTSVPISFG
AMETHGITPEMLDGKPLCKDSTSYRRLNELNSDENYLIIHNAKFDIDMLQ
KEGFKTQMRVIDTLRVAKHLLPDEEAHRLQYFRYKMELYKEEQKEADELN
IVIKAHDAIGDVLVLKLLLSRLKKLVLEKFPNENPVEKMVDLTLTPIMIK
SFNFGKYRGKTLQEVATSDAPYLRWMLTNMENLDEDMRYSINRLLSN
>Tmden_0693 Integrase, catalytic region
MSKLDLSIGSKVFYNNVEHIILKAVNFHTLSIAPTNNQNEIINVKIQDLS
SKPQEEKTQLDSYTDEEWSEAKKKYNAIKELVFRKKSRDEVEEVAAKYKV
TAMTVYRWIKTYEESEKISSLISSKHKRGKKGSRIEPLTNKVIEDVIEEL
YLTKQRIGFPKIFNTIKAECKKLNIIPPHENTVRNRIKTIDPKFALKKRF
SAKKANEKYGNFEGEYPEGNFPLEVYQIDHTPLDIILVDSHSRKPLGRPY
LTLAIDVYSRMVAGFYLSLQAPGYFSVSQCLYNAFLPKDDFLKKYDIQGE
WEIYGIPSKYAVDNGKDLIGLDMQRVCDEFGMTMVRRPVGRPQYGSHVER
IFLTINKEIHNLPGTTFSNIAEKAEYDSIKNATFTLDEITKWLTEFIVNV
YHNRVHHGIGMTPRQKYSLGIFGDDENPGTGLPPIVEDRESIKIALLPAF
YRTVQKDGITLDGITYYSDVLRTWINRDDEQGNKLKFKVKRDPLSIQKLY
FFDPELKEYFELSYRKLHAPDMTVWDLYTAKRYLKENSIKDTNEDDLFDA
YERLTHIEKQAKEKTAKHKIRKSKAPKMSDIKSKSKTESQVVKEKETKQA
DDVFHDLFDNIETFHIKE
>Tmden_1713 Transposase, IS4
MEENIITIFCLVDDILKAINVKDDVRAKICNAEILTIGYMAVRYFHGNYY
SAHQFFMSMKPSYPIDYSRFIRRLNNLHNAIDYAFQLLSEVFYKTAKSTI
YSVDSFPVEVCKIERSSTCNIYNHKDMKGYNASKKRFFYGFKVHMVVTTN
KEPLHCYISYANEHDATAAKRYLPAMKANSSVIGDKGYVSKKLATFLTKF
GVNLNAIQRSNMGEDKDCFIKRRLRKKVETVFSIITGRFGNVIKATSIDG
FLTKLKLFITAYSMDCFLKLSDDEKQLSI
>Tmden_1708 conserved hypothetical protein
MARKVRIFVENAAQHVILKSIDNTTLFKEEQDYILFLEILKELSLNHDMD
IHSYILMPQYFEFLATPKHADALSKFMQSLGRKYVGYFNKKYNRTGTLWD
GRYKASLIENKSYLFEIMRYIEQQSHVDYLYSSVGKNLLGRADSIVSQNE
LYKKLGYTDDKRLSEYSQFFYSGINNAKKEFIVSCLEKQLVTGSVDFVKN
LQHLVGMTLISKDRGRPKKEDEEKRKKMYKNLVVLDKEQHKDLKISPMEN
LFFAKQSAFIPVIANEVALVGAAFPVVFTADENPSLVSLVSLGGDSLAIN
ADGKWVTSYVPSYLRKYPFSLASTKENPDQKVILIDEESPLFSKTKGKQL
FKKDKEQSETLSHAINFLTSHENQSIITSNVAKAIAASGILEDREISVGE
GDEKKVLVNGFRVVDREKLNALSDDILADWVRKGIISLIDAHLKSLDNIQ
ALFNIAHARQS
>Tmden_0129 N-6 DNA methylase
MMKINKLLVDNLLENEYVKAISSKHRKQFAQFFTPFSIANLMSKWILGNQ
NLKTVLEPAFGLGIFSRVLLSCKEDIEIKGFEVDKIIFQKAKQYFSETKN
CNIILQDYMYNDWKNKYDGIICNPPYFKFHDYDNKNILKEIETNLKCKLN
GFTNLYTLFLLKSIHQLSVNGRCAYVIPSEFLNSDYGKLVKTYLIKSKTL
RHVIVINFEENLFDDALTTASIIFCSNDNLTEKVQFTNIKSLEDLSKIEE
IISKYPNFSKTEQTYHYLDLNPEIKWKAYYQKQNGAKFKNLIPFSTYAKV
VRGIATGSNNYFVFNLSKAKEFGISEQYLLPCICSAKDAKTSFFTTKDFE
ILKNNDKSIFLFNAKDLNNKKVQEYIKKGETEGVDKKFLTSSRTPWYSIE
NRQPAPIWVSVFNRNGLRFIRNEANVSNLTSFHCVYPKQNNLFSELDINL
LFAYLLTNTAKQIFTDNSREYGNGLQKFEPNDLNKAMMLNLSLLDNDTVN
KILYFYDLYRQGLDCISEIDKILIENFSLEEIL
>Tmden_0023 DNA primase
MITQDSIEALKARLDIVDVVGSHVELKKTGANYKAPCPFHDEKSASFVVS
PSKQIYHCFGCGAGGDSIKFVMEFEKLNYPEALEKLASTYNFSLSYSDNK
STKSSSGIMQKIDSWYHYLFTKNPQAISYIKERGIYESSIEKFGIGYAPD
SNATISFIKSQLLSMNEAIEMGIVGNDGSRAYARFIERITFPIHSANGTI
VGFGGRTITGHQAKYVNSPETPYFNKSRLLYAYHHAKQTIHKTKEIVITE
GYLDVIMLHQAGFTNAVATLGTALTSEHLPILRKGEPKVIMAYDGDKAGR
AAALKASKILSAGGFNGGVVIFSDGLDPADMVKNGAVEELSNMFRAPQPF
IEFVLDEILSLYNLRDPKARELCMQDAIGYLKTLSAMLQEEYKSYLASRL
GLSPSYIKITNKSNINQNLPFIDKNRHRDMWELTLIKTVLEHPEFIDQIL
DVLDPSLLKFHSSELSLALRGEFSHPQLMAIAVDEQIKALNSEDALRAEL
VSFLMKHYEREYKKVNVLSDITFEEKAFYIRKFKGKIELLKRGELVAFKS
>Tmden_0002 DNA-directed DNA polymerase
MKITIQKSIIENILIHSQPFLEKKDTSQITSHVFIDASNNKLTLKATDYE
IGLIVSTDKLNISQDGNVTANGKKLLDIVRILKDGEINLEVKSDILYISQ
SHSKFKLPTFSYNEFPVFPMSEGKSRILIDSHSLIDSLKKITPSIDINNP
KFELNGALIDIKQNNINFASTDTRRLAVVNIENQSSSELSIIVPKKAIVE
IQKLFFDNIELYYDENYLIIHSKEYTFFTKLINGKFPEYSRIIPKEIKNT
LILQKAKMIEAIKQITTISTDVKITFLNDTVIFESLSDDNIEAKTEINSI
TGFTTPFTIAVNSRYLLDFLNTINSSEFNIGLNDSNLPFVLNDGNFKTVV
MPIVI
>Tmden_0640 DNA gyrase, subunit A
MSNLLHNDNIQTINIEETLQSSYLDYSMSVIVGRALPDVRDGLKPVHRRI
LYAMDKLSLSHGAKFKKSARIVGDVIGQYHPHGDTAVYDALVRMAQHFSM
RMQLVDGQGNFGSVDGDNAAAMRYTEARMTKYAGELLKDLEKNTVNMIDN
YDGTTKEPDVMPTRVPNLLINGSSGIAVGMATNIPPHNPQEIMMGLKALL
ANPNIELYELMEHIKAPDFPTGGTIFGKKGIMDAYATGRGRIKVRAKTHI
EKKGNKDIIIIDELPYQVNKARLIENIANLVKDKMIDGVSEIRDESDREG
IRVVIELKKDAMSEIVLNNLFKQTSMQVTFGIIMLSILNQEPRIFGIIDI
LKHFINHRKTIIIRRTIFDLEKAKARAHILEGLKKALDIIDEIIRVIKSS
KNIEEARDNLVSEFDFSVIQAQSIVDMRLGRLTGLEREKIENELLELLKL
ITYLESILKSEEVLHGIIDQEFDELLTIYTDVRRTDVEDDYDDIDVEDLI
PNEPMVVTITHRGYIKRVPLAQYEKQKRGGKGKIAVTTYEDDFIERFFTC
NTHDTLLFVTDRGQLHWLKVYKIPEGSRTAKGKAVVNLLNLVADEQIQSI
NPTTDFSEEKSLVFFTKKGVVKRTNLSEFSNIRSNGVKAILLDDDDSIIT
AKIADKSIKYLFIMTKMSQCIKFDMEKTRDQGRNTRGVRGIKFKHAEDEV
VDANIIANDEQEILVVSEKGIGKRTDAGEYRLTNRGGSGVIAMKMTAKTG
KYVVGCLMVDEEMDMMALTKAGKMIRVDMQTISKSSRNTSGVYIVKGDDV
ASVSRCPKQPIEDDEEDDSLFESNELE
>Tmden_1724 Protein of unknown function DUF1568
MPRKERYQEPCYYHIVNRGVERRSIYLELEDYEFFLDLLLKASKDYELII
HAFCLMTNHYHILLETKQTNLSKAMQFVNDKYAKYFNKKYTRSGHLWQGR
YKSYPLFDDAHFWIVAKYIERNPIKANMVQDVALYKYQSFFQWKYKHNYF
ELLNDSMIFEMTYDEYSDYLSSEMDIDAIDIVYKSPKLITTKEGNLKVLK
KRLETFFEQDRDINRNENIKKAFEYGYTKSEIAEFINLSTKTINTILK
>Tmden_1163 Excinuclease ABC, A subunit
MKNRDVIKIVGARENNLKNISLEIPKNQLVVFTGLSGSGKSTLAFDTLYA
EGQRRYMESLSSYARQFLDRVGKPDVDKIEGLTPAIAIDQKTTSKNPRST
VGTITEIYDYLRLLYARVGIQHCHNCGKEISQMSASDIIGEVAKLPQGAK
LVLLAPIVNEKKGTYADVLESLVHKGYVRAMIDGVMVRLDEEIELSKTKK
HTIKVVIDRVVVNEQNKERIAADVEKALKESYGELEIEILNHEELGLGRS
HMHYSEHNACFDCKVSFEPLEPLSFSFNSPKGACKECDGLGLRYALDQDK
IIDIDLSVEKGAIKIIYGFNKGYYFTFLKGFCAQNKIDTTIPYSELEEYQ
KKAILHGGIDEASFLWKGHEVKRVWPGIIKIAYDMFKDEKELADYMSEKK
CSVCSSHRLKRESLSVRVAGKGIADILDMPISKSYEWFKEKSNFNYFTDQ
SAQVSAPILNEIRERLYFLFDVGLGYITLGRDARTISGGEAQRIRIASQI
GSGLTGVLYVLDEPSIGLHERDTLKLIRTLRSLQEKGNSVIVVEHDKETI
ENADFIVDIGSGAGKFGGEVVFAGTLDKLKKAKTLTADYLYGRKKIEYFY
RRAQDKFIEIKNVTLNNINNLNVKIPLNNFVCITGVSGSGKSSLMLQTLL
PTARELLNHARKVNKVAGVEINGLEHVDKVIYLDQSPIGRTPRSNPATYT
GLMDEIRNLFEQTKEAQIRGYTSSRFSFNVRGGRCEKCQGEGENKIEMHF
LPDIMVKCDTCNGTRYNQQTLEVYYKGKNISDVLNMSVEEAYEFFKAIPK
LNQILSTLVDVGLGYITLGQNAVTLSGGEAQRIKLSKELSRKDTGKTLYI
LDEPTTGLHFADVDRLTGVLHKFVELGNSVLIIEHNLDMIKNADYIIDMG
PEGGSGGGLIIAEGNPEEVAKNHKKSGSYTGEYLAKELLLHK
>Tmden_0584 ATP dependent DNA ligase, central
MKNLFKLIIFTLLFVTSSSALTLQKGTLYTNQDIKGYLMSEKLDGIRAYW
DGKNLLTRQNKVINAPEFFTQNLPPFELDGELWTSRGDFENIQSIVMDKT
PSKKWSEIKYMIFEVPHAKGDFLKRLEKAREHIEKKRALHVEIIEQKICN
SKRDLDLFLKEILSRGGEGVMLKDASREYFEGRSEHLLKVKKADDMEAEV
IGIKEGKGKFKGLMGSLHVRVESGVEFFIGSGFSDEDRKNPPKIGEIVTF
KYYGFTKEGKPKFASFMRVRED
>Tmden_0938 Phage integrase
MAKSIKYVYGELKFTIKEQFGHWYLDFYLPSGERQRGTTKLRATAENLKV
IKRQVIPDIYEGLGKEPIGIEEEAKTWTLQDFAEEFFELQKTQIRPHTLE
RNIMHYNNHIAPYFGKRELGRITPLEIERWQNQLLQKYKHLTVQKFRSIL
FSIYDKALHNDLVLKNPLEKVTAPKVQNNIKIEEINPFTEKELNQIIEHA
NGYMKNFIKLMAATGMRPGEIIALKWSDIDFEKRTIKVERTRLRAKKGED
IVDGLTKIKSSNRFVDMLNATHDSLMAQLELTSNSEYIFLNQSNMPFYNH
DIIGVNFRKILKQSGVKARPLYNLRHTFASQMISKGADITWVSKMLGHKD
VSITLKIYTKFIQEDDETRLKKIAQMDKFMVKFDNSDDKNTDK
>Tmden_2022 hypothetical protein
MGLSELKNIEFNKLNLHEVKETIQHVIDTKTKNLHDALAELLLQKELLEK
SIQKKHSELQEAKYAIFNEVESMIDKNDVQTLSKLHQAKLQSIDLFDILS
ETVEGAIITALEESKDSEAKNMIEEIIRELTFQTIKEGTLNTIRVRKILS
TILHSSIDIAEASPNLSEDILDATLRGMRAGLFESIDRFKKRLAFMPLEA
KHILIEDYDTIMEDLNQTDTLFLQVVQTQANESSLAIRKILLELNKKMHY
DLEELIYISKETAQVMKERFSQLAKKAVKRADSALKSETAKEAKRMGIQA
WGVAKTALSSAIKTAKSKIEPKE
>Tmden_0339 conserved hypothetical protein
MKLLSVLLVGATLCFGAVDINKADKAQLMEIKGVGEAKANAILEYRKEHK
CFKTVEEIKNVKGFGVKFLEKNKSNLEASSCKK
>Tmden_0763 hypothetical protein
MAKKSLIEEAKGFTEESGAFTKESGAFTKESGAFESKLESAKKVLERLMN
PEITLQDSLRAYELGMSELSSAQKILEDAQIKINEIKAT
>Tmden_1083 TatD-related deoxyribonuclease
MVVDTHVHLDDERFIDDLDEVLNRARDGGVERFIIPGADPINLKRAVLIA
QNNSDVYFAVGVHPYDMDSFNEDDFKELIMHKKCVAVGECGLDYFRLEGT
EDEKEEEKRKQKEIFIAQIELAKKYKKPLIVHIRDASRDSKEILLKHNAS
EVGGVLHCYNADEELLSLAKEGFYFGIGGVLTFSNAKKLIHVLPKIPLDK
LLIETDAPYLTPTPHRGKRNEPLYTQLILKKIAELLEISEQKVEEISTKN
AFKLFHIS
>Tmden_1209 DNA recombination protein, RuvA
MIVGVRGVLVSKEPSFVHVDVGGVVYEVFISLQSFSALSGNEVKLFTSHV
IREDAQLLYGFLELGEKKLFERLIKINGVGPKVAMAICSTYTPSQFAVVL
NNKDITAVQRVPGIGPKSAGRILVELSGFDTELIISASEPKSLAVAQASE
ALESLGFKKDKISKALGSCSAVDTAILVKEALKLLQTI
>Tmden_0542 DNA polymerase III, delta
MYKNELDKHIKNNSLSTSFILFGESTFLIDRYTDILSINEGASVLKFYHD
EYNFNSAKAHLSQASLFGDQNILIIKSEKKIPKKELDILIEQCEKGSDNI
FVYAYYGSDYTSYAKPLSKTKTMPVRFFHPSHSEAIASVAQIAHEKNVKI
DTQAINHLLNIQNSDIALACNEIEKLRVYDRAITTKDIDSLIFGLAQINI
DDFIKKILNKRDFKSDLMSLLEHGEDEIRLLTALTSYLTQLYMFNIYIRV
NGAPNPIEILGYKPPPHVVEEKATQAIKIKPRQYYKLHELLLESELKMKS
SHVDKSAILLSTFIRVQQLL
>Tmden_1840 DNA-directed DNA polymerase
MKYINLSYFKPLLSNLPTIAFMKIHIDIDCFFVSAARIQEPSLEFKPVAI
GGRSDTKIFNKDAKKQAVNFENSGSFVPTFYKAYEERDDDIDAFKDEDGR
VRGILTTSSYEARAYGVKTAMSIKEALSLCPHLIIKAPDMSLYQKLSHEL
HEFLQTKIPLVEQASIDEFYGDLSGWVDDSDVPNFIAALRDEIKSVTKLP
VSIGAAKTRYIAKLSTTYAKPFGCRVIFENELESFIEKIPVTKFAGIGKS
MSEKLLDAQIHTLGELSKRRGTIESWGPYAKELYLRVCGLSDDDITTKHI
RKSIGISRTFDPLRDRNELRRRVHVLARHLSFAILKLKVIPTVFHLSLNY
EMSQKSHKNISLCEIFTEKKFDSLCLKLFDEADVHKRLHLIRMSINCSSF
TRESRKELSLIGFEEDQKMYRLTNHSQEIREKYGIDMLKWGSEL
>Tmden_0369 Nucleoside diphosphate pyrophosphatase
MYKINSVQTLENPRFIKPILICYSILNIERKWEAVVTHDSVAILLWHRTR
DAFILVKQLRATVLNKNQNDGMMYELCAGIVDKATSLEQIAKEEVLEECG
FNITVESLQKISSFYTSVGISGTHQTLYYAECDDSMKIDEGGGLEDENIE
VVYIPTKEAKEFMFNESYQKTTGVMLAFYWFFDNINQIQ
>Tmden_1247 Phage integrase
MSNELEAFIEYISVIKALSRKSVDAYTCDLKQIELALNKPLISLDSKTLF
NLLSEYKNKRTLNRKLSSVNAFFDFCYKNQFVDEKKKVKFSKIPKLLPKF
LSYQQIQNALSQVDRSSVLGLRDYAMIIFLYATGARISECLALRREDIEG
EWLHIRHAKGEKERIVPIAFVAKTAVDAYMNELKKTKEYVWSNYKGEKLS
RISAYKITQKYLGVSPHVLRHSYATALIAGGADLRVVQELLGHSSLLTTQ
IYTHIQKQDLKETLEVCHPMAKEHLWVE
>Tmden_1452 Exonuclease
MFSFITNFKKNANRKKLKDSAFEFLFDDDKSGEYVVFDTETTGLNPKVDE
ILSIGAVKIKDNRVLTSQTFEVFLQNSKEISSNSIKIHGIRPFDLKDAKT
TKEGIVEFLNFIGSRPLIGYYLEFDVAMINRYTKPLLGINLPNKMIEVSE
IYFDKTISLIPQGNIDLRFDTILKNCSIPNMGAHNAVNDAIMTAMIYLKL
TKEKE
>Tmden_0418 Excinuclease ABC, C subunit
MTLRECIKQLPDSAGVYQYFDKDGHLLYIGKAKSLAKRVKSYFNFAPKFK
PNSNLSSRISKMISQTHTLQYIVVNSEHDALILENSLIKQLMPKYNILLR
DDKTYPYIYIDNSQKYPRFEMTRKIIKSSNIKYYGPFSVGARDILDSIYE
LCALVQKKGSLTSKKLCLYHQINRCLGPCELHVSDEDYQRELDLAKELIL
NKKILIKKLQEKMFYYADNLRFEEATALRDRCERISRSEIKSEIDFASSE
NYDIFVIASSQSRAVVVRIFMREGKIISSSHDYIQLHEGYDEDELYQRAI
MGFYSHGKPPIIAPILVASEFEGKDSIEEFLSTLFEKKADIKVPKTAKRK
QLIDLALLNAAELLKNETKENQSGILDEIKKLFSLQRVPSRVETFDNSHM
SGVATVGAMSVYENGAFDKKSYRIYHLEARDEYAQMREMLLRRVESFLKN
PPPDLWILDGGSTLLNLALSILESSGVNIDVIAIAKEKVDAKAHRAKGKA
KDIIYSREDIFKLLDSDKRLHFVQKLRDEAHRCAINFHKKTKLKSDNESK
LLTLKGISQAKIIKLLKHFTTFDAIKEASVEELSTVLNLKDANIIKSSYI
>Tmden_1946 transcriptional regulator, AraC family
MDEISLLHDNYKQIEKAIKYIDENFKEHPSIDEVAKNIGMSKFHFIRVFK
EYVGVTPKQFLHSVTLNYAKEHIKESKSILDSSLDIGLSSSSRLHELFVN
LIGVTPKEWREKGKDVLITYGYGQTPFGEALIGFTDKGVCYLGFIDENKN
EIFKRFNELWENANLHFDEKAAREYLENIFIKNKKYSLFVKGTNLQVNVW
KALLNLPNGVVATYQDIANYLEKPKATRAVASAIGKNHIGYLIPCHRVIA
KSGAMSGYRWGIERKKILIACESIQNNQLSNK
>Tmden_0779 Integron integrase
MKKKLLDIVRDKIRFKHYSISTEKTYVFWIKHYIFYHQKQHPVNLGKKEI
EDFLTFLAVTKKVSPTTQNQAFSALLFLYREVLDIEISTWNVQALRAQQR
KHIPVVLTKDEVQNIILNMNGIYQLMVKLMYGCGLRMSEVQNIRIKDIDF
GFDKIYVWDGKSLKDRTLPLPMKIKDELKIQVEKVRELHQKDLKDGYGSV
YIPYAFERKFPKAKFETKWQYIFPMNTIATDPRSGERRRHHILDATLSRN
IKQAVTKSNIDKRVTSHIFRHSYATHLLQAGIDLRSIQELLGHKSVETTM
IYTHVVSEMNKAKLISPLDF
>Tmden_1253 conserved hypothetical protein
MKALHLSIALLALCSSFVVAQDKNSLEEYISDNKKEYFRLESDKVDSSSN
VLRDSWISPLMLNYSYGVSEAYDTESITKKTSITIDQPIFQSGGIYFGIK
YAEATRLYSQYSVDVAKRKLIKDAISLLMQIKQSEMRIQKQKLLIKNAEI
NLAQKKESYLSGQLDSGFLNSAIIDKNIAIQALYDIEANRERLISKFRVI
SDLDYEKATLPHLEIIEKEEFMVNNLSFKQSQSLSEKNRYFKSTTISKYL
PKISIYAGYNMDRSENFAFQGGSLSGSRETDYINYGLKASMPLNISMFDD
IQSAKVEYLVSKIEELDKKKELNALFEQVMQNLESLKKKRILSVENTQLY
EELLAETKELYGAGYKTEYDVELLNNSLHVQKNDIEIYELDRQLELLTLY
EIYKNEI
>Tmden_1128 conserved hypothetical protein
MQQHDSLKADYKFSEEEARILATLQPKMSELSDKFINEFYDYIWGFGSTA
KFLKNQKIIDYHRTKIKAWFINLFCGKYDLQYFMYLYKIGEIHVRIGLPT
HYVNSAFTFVRTFIIKNIQESIEDEESRLKAIQAAEKIVDINLDTLTSSY
REEELSKFLSLSKFEKTILGGLKKFNSYINFFLAGSLALVAFFAIGLFVY
DIYLLFFSDIGIEKGILTVLGSLLVLWAAIELIHEEINHLQGKGFAIGAF
IMLAMAALIRKVLIYSLSSEKGNDLLVIGVVIVALAFSYWLVNVKNKAPL
>Tmden_1835 Deoxyribonuclease IV (phage T4-induced)
MSKFVGAHVSASGGVFNAVENAQKIGAKAFALFTKNQRQWSAKEFDSETI
DKFKTALEKSGILPRHVLPHDSYLINLGHPELDAREKSLDAFLDEVQRCS
LLGLDRLNFHPGSHLKKISEDECLANISESMNRVLDKTSGVSLVIENTAG
QGSNLGWKFEHLAQIIDKVEDKSRVGVCIDTCHMFSAGYDIRTREAYDKS
WGEFDKIVGFKYLMGMHINDSKAKFGSHVDRHNSLGVGEIGLDTFKFIMN
DERMDDIPLILETIDDSIWAQEIRLLYSFVN
>Tmden_1611 Deoxyribodipyrimidine photolyase
MKRVLWFRRDLRVKDNPLLTLGGEVLPIFIFDENILKELSQDDKRVTFIF
HYLLKLKSDLQHIGLDLKIFYGTPEAVFEHLSKFDEVVASGDYDSYAKSR
DLHISHKLHFRYLHDTYIFKPKEILKDDGSPYFVFTPFYKKARVALHVKD
LQEKKIAQNILIGSDYEGITKVDIGITKLSLAIESIGFKAQNLNIIAPQK
KLENFKKNISKYSQMRDFLDVDISSSLSVDLRFGTISIREVLLEVLKLAE
VSEPFIRQLIFRDFYAYALFHTPHVESENYKYSFNGIEDKEKFIAFCSAK
TGVPIVDAGVRELLKTGYMHNRVRMVVASFFTKDLLLPWQWGERFFAEHL
LDYDKASNVLSWQWSAGTGVDPQPYFRIFNPYLQSKKFDKEALYIKRYVS
ELSTIEIKNIHKEEYLLCADIKDYPKPIVTHKEASKRAVELFKKR
>Tmden_1648 DNA polymerase III delta prime subunit HolB
MLEPDSIKSHIIITSDIAAEFERLNDELKPKRVVGFIVEDEFKIEHAKAA
VAEAYISESETKYIILGANNFNTVSQNSLLKALEEPPRNIEFIILSNSTS
NLLPTVRSRLPIFKGKKEHKVYEIDFSLMRINYNDIFEFLKKVVKFKKSE
AKEQVEALYYRATVIDKLILTKAQLDNFDRAFRLLDLNARPQSVFALLLM
SFAGDRNGS
>Tmden_0236 hypothetical protein
MIRKLVLIIPALVFAFGNKQQYEIDQKAQQIGFSKIFDKYKNGILEPSSL
EFNSMVYDDSNNIIIAGAKSGKPIVRKVDVHGNELWRKQYGDDYGGVQYI
EKASENTYILIRNTEDKKNKNSFLTQVLLIDTYGNLKGESLFPLLLDENS
KIKQTNDKGFILVSGTNIIKMDANGFKVWHQTYENLDLNDFIELVNDEYL
FVGKKNIDEKKIDKSAHIMRTDSKGNILWNKDYTNINEFQNIIAKPNELI
LMGNMPLQVTITKIDQKGNIIWNYIHTASENTFGRDFIENKSGNFVVAGK
IYMSSVKSEYLMIFELTNNGELLWNHSYGLSYGSDTANSILEAPDGYIMS
GVITPIEHKRNESGFFPSRERGWIFKVNRQGVYSD
>Tmden_1284 RecR protein
MSESLEKFNKLVEAFQELPTIGKKSAIRLAYHIVMKNSFVGIKIAHAIEE
ALGSIKQCAACGGMSEDELCFICCDESRDETLLCIVENAKDILLLEENRL
FDGRYFVLDSLENFNLSGLESLVKNGVEEIVFALTPSIANDAVILYIEDK
LSDFTINFSKIAQGVPTGVSLENIDLLSLSRALIDRVKV
>Tmden_0800 Phage integrase
MQNIKVSIINRENRKYWYVMYYVYFENSVVKKFEESTKVLKTEKTLKYMQ
TQYLSPWIARKQEELNIKTNVSKKFSYFYEKYLKLHEEDKSFHNRIYVYR
KVNDFFKDFDINKITRLMVKEYLSSFDNIKDRTKKDYLSCIKSVIDIAMD
AEIVNKNVATDITFKASEKELIHPFSTDEVSLLLEKSHGMFRNYLGIALH
TGMRSGEILGLMHQDILNDRITIKRSISKGRITTPKTIGSIRDIPMFEAV
KPFIESQGKLSKSLYLFEHDGVFIKDASFFKRRWHQLVEDCGIEYRKLYS
TRHTFITAMLNSGKFKIMEIAAIVGHTSPEMIIKNYAGFIKDSHLKVDTS
IDLFKNVSDTFSDTLKIKI
>Tmden_0058 hypothetical protein
MEQKICFYCNGRLYQLKNRMVKCSLCAKKYSLLKLQRDFDVIDAFVESTT
ARACAIKLNLSYQVVFNRYEQIRKLLIRHSHDYYEYKRDKLDEFEEYMYI
CQSKKKDYTNIIESQNFITFAYEEKVYNFLLPSLKRFQTKPSGNNSEVAH
QNEFKKFMLTNRISKLKTLENTIIKFWRFFEVFITPYKGVKSEYFLSYLK
EAEFKFNYNKKEQKEILTYLWSLEHSS
>Tmden_1767 DEAD/DEAH box helicase-like
MQENAQTQTEEKLITFDDLGLKKEILRSVKDAGFTVPSPIQAAAIPFILA
GRDIVGQAHTGTGKTAAFGLPALNNINPNDGVGILVITPTRELATQVSDE
LFKYGRNIGARTVTVYGGSSYNRQIDLIQRGASVVVATPGRLLDILKKNL
LKDFAPSIVVLDEADEMLDMGFLDDINEIFSYLPSNRQTLLFSATMPKPI
KLLAERILDNPEFISITKGETTNTDINQEYYVIEESERDDAIIRLMDAEA
CQKSIVFCRTKSEVDRLSNVLSSAGYLANGLHGDMEQRQRETVIKGFKNN
GVKVLVATDVAARGIHVDNISHVFNYHIPFDPESYVHRIGRTGRAGTKGK
AITLLTPLEFKELQRIKTKVGTTMTHAFVPSKNDLRAINLKSIATSIEEH
NIYDEAHQILDMLKEDIDEPTIMFKLVSMILDRQAIQGPNSIGIPAEKLA
AILERADKRRDSKGGRGNFRGNRSARPSGDRNRSGSGDRNRSSSSSDRPR
SSEGGDRNARPSGGGYRGTSSTGERSRPSGDRNRTSRSRD
>Tmden_0171 DNA topoisomerase
MNLIIVESPAKAKTIKNFLGKEYEVIASKGHIRDLPKSRFGITVDENSHL
IPAYSVAKENAATVKEITTLAKKSDIIYIATDEDREGEAIGWHIAHAIKK
DPAELPRIVFHEITKTAIENALLNARKIDMDMVNAQQARRILDRVVGYKL
SPLLSSKIQKGLSAGRVQSSTLKLVVDREREIRAFVAEEYWTIDTLFAKD
IEASLISHMGEKLSKLSITNKADASSIVKSVKEDSFIISKIETKERRSAT
PPPFMTSTLQQVASSKLGFTPKKTMMVAQTLYEGVKTPSGTSGVITYMRT
DSLNLAHEALTAVRGLIESRFGKKYLPAEPKIYTKKAKGAQEAHEAIRPT
MLAFTPEVAASFLKPDEIKLYRLIYERFVSCQMNDAVFEQQSIIFSGANN
EYKAIGRKLTFDGFYALTGAEDKDKLLPSLSEGQSAQIQKIESTQHFTEP
PARYSEAALIKKLESEGIGRPSTYAPTIATLSNRTYVTIEKKQIIPTEMA
FTVTEILEKNFSNIVDLSFTANMEEKLDEIAEGQNDWQKLLSDFYGDFLA
QVEEGKTNIVSLKMATPLGRACPKCGEELLLRSGRFGEFIACSAFPKCKY
TEQVEGEKKEGEENAQSSSSDEICDKCGKEMVTKNGRNGPFLACSGYPDC
KNTKSINVEEKTSETPCPDCGGKISLKNSRRGPFWGCENYPTCKFISKFE
PSKYKCRESGCDGALAFRVFRGKEIYECIKCKAKTPAQEIVAE
>Tmden_1725 Protein of unknown function DUF1568
MPRKERYQEPCYYHIVNRGVERRSIYLELEDYEFFLDLLLKASKDYELII
HAFCLMTNHYHILLETKQTNLSKAMQFVNDKYAKYFNKKYTRSGHLWQGR
YKSYPLFDDAHFWIVAKYIERNPIKANMVQDVAIYKYQSFFQWKYKHNYF
ELLNDSMIFEMTYDEYSDYLSSEMDIDAIDIVYKSPKLITTKEGNLKVLK
KRLETFFEQDRDINRNENIKKAFEYGYTKSEIAEFINLSTKTINTILK
>Tmden_0001 chromosomal replication initiator protein, DnaA
MNIGEKILLLLKEEIPEIEYNRYIKHLTYDTKKSTADNAIFYVPNSLVLS
WIKNRYSSKIKHLFEIQNSIKVDVSILLKNQVESKKAEQKSVQKQQHSLL
NPSHTFENFMVGGSNQFAYAAVKSVSEKAGVLYNPLFIHGGVGLGKTHLM
QAAGNVFQNQGKVVIYTTVEQFLNDFIRHVRNKTMERFQEKYRKCDVLLI
DDIQFLSNKEGIQEEFFHTFEALKGVGKQIILTADKHPKKIAGLEKRLQS
RFEHGLVADIQPPELETKIAIIENKCKINKVILTKDIIHYIATVIESNVR
EIEGILSKLHAYSQLMHVDIDLQFTKNVLKDQLQENRANLTLDIITQNVA
KDLNIKPSEIRSKGRSKNLVYARRIAIYLCRELTQNTMPQLAQYFGMQDH
TAISHTLKKIGELMQNDEDFKVKIEELTNKITSSS
>Tmden_1590 Integrase, catalytic region
MSKLDLSIGSKVFYNNVEHIILKAVNFHTLSIAPTNNQNEIINVKIQDLS
SKPQEEKTQLDSYTDEEWSEAKKKYNAIKELVFRKKSRDEVEEVAAKYKV
TAMTVYRWIKTYEESEKISSLISSKHKRGKKGSRIEPLTNKVIEDVIEEL
YLTKQRIGFPKIFNTIKAECKKLNIIPPHENTVRNRIKTIDPKFALKKRF
SAKKANEKYGNFEGEYPEGNFPLEVYQIDHTPLDIILVDSHSRKPLGRPY
LTLAIDVYSRMVAGFYLSLQAPGYFSVSQCLYNAFLPKDDFLKKYDIQGE
WEIYGIPSKYAVDNGKDLIGLDMQRVCDEFGMTMVRRPVGRPQYGSHVER
IFLTINKEIHNLPGTTFSNIAEKAEYDSIKNATFTLDEITKWLTEFIVNV
YHNRVHHGIGMTPRQKYSLGIFGDDENPGTGLPPIVEDRESIKIALLPAF
YRTVQKDGITLDGITYYSDVLRTWINRDDEQGNKLKFKVKRDPLSIQKLY
FFDPELKEYFELSYRKLHAPDMTVWDLYTAKRYLKENSIKDTNEDDLFDA
YERLTHIEKQAKEKTAKHKIRKSKAPKMSDIKSKSKTESQVVKEKETKQA
DDVFHDLFDNIETFHIKE
>Tmden_0740 UvrD/REP helicase
MPLSRLNEEQYVAATSKELQNLIIASAGTGKTSTIVGRIAHLLENGVEPS
QILLLTFTNKSAAEMVSRVAEFFGKDIASKIDAGTFHAVSYRWLKKHDKK
VVLKQQRELKTLFRSVYEKRSFGHLGAEITPYGGNYLYDVYSFYQNTELN
THFEDWIKFKYPEHELFAMIYADIVDEFEALKREYGFVNFNDLLLNFREM
CKTKELGYKEVLVDEYQDTNALQGTLIDAMNPPSLFCVGDYDQSIYAFNG
ADISIIGSFSTKFPSAKVHTLTKNYRSTVPILSLATKVIEHNERIYPKKL
EVTRVHDSHPPRLLAYDELFDQYHDIAFKISNTQTPRDEIAVIFRNNSSA
DGIEVGLRELGITCKRKGGTSFFDSREVKAVLDFYTLLINESDMMAFIHL
FEFARGVGSAVAKELYLALKMLGHGSVFYGLYAPDESISNPFEKRKLNQQ
LGLFDDFLELGSVGKFAKCGFEDKFMRNPILKHPKLTKENATFLHDFYLL
YRDLKGVREPRVIVAKIAKSEIYKYIAEYLSNRRALLKDGTIDEKQKADS
LSNIARKMVLLEELSKPYSEHERFLNAMILGSSDLTQGEGVNLLSVHASK
GLEYKEVYIVDLMDGRFPNRKLMQRGGSLDEERRLFYVAVTRAKDILYLS
YAKYDKIKKLNFVPSQFLYEASLVPKDEAYREMVLKEESKEE
>Tmden_1592 hypothetical protein
MIKKINFPELKNENFVIIPLPLEDELLSSWIVRTAYAHKTHPHTFTNQYL
NYRQHSFFLAQSDLTLDPEMIKIIEEKSHHKIDIRSLILTTYSGYIQENI
YENNPATFFTHQKYCPICLREDKVPYFRKKWRVVFYNICHKHQCRLYEHC
PSCKTKLDTSQMYENRLPYTHCHHCGFELKKGRKLPIHKKHISSLEYQNK
IFKTIENGYIQLGKTPVYSFLFFEVFSKLSKLILLNYKHKFIDKHPLFLL
IKDAKHQNVNHPIFKKVDAKAQSALFGLIMYIFEDFPHNLKAYIQANRLT
YYDLTTKVHNIPFWYESIVNDISPRYLPHSMTVTKEEVEHAEQYLKSIRK
EINKANLTKLLGCNFGSNDNNLKNFIQQ
>Tmden_0695 hypothetical protein
MIKKINFPELKNENFVIIPLPLEDELLSSWIVRTAYAHKTHPHTFTNQYL
NYRQHSFFLAQSDLTLDPEMIKIIEEKSHHKIDIRSLILTTYSGYIQENI
YENNPATFFTHQKYCPICLREDKVPYFRKKWRVVFYNICHKHQCRLYEHC
PSCKTKLDTSQMYENRLPYTHCHHCGFELKKGRKLPIHKKHISSLEYQNK
IFKTIENGYIQLGKTPVYSFLFFEVFSKLSKLILLNYKHKFIDKHPLFLL
IKDAKHQNVNHPIFKKVDAKAQSALFGLIMYIFEDFPHNLKAYIQANRLT
YYDLTTKVHNIPFWYESIVNDISPRYLPHSMTVTKEEVEHAEQYLKSIRK
EINKANLTKLLGCNFGSNDNNLKNFIQQ
>Tmden_0516 Endonuclease III/Nth
MLMIIKQDYFIYNSFMKKATKEEIKEIHQLFIDNYSEAVTELDYKNAYEL
VVAVSLSAQCTDKRVNLITPALFKRYPDTKSLAIADIEDVKNIINSCSFF
NNKAKNIIEMAKRVEDVYGGNIPMDEKELITLSGVGQKTANVVMIEYTGA
NLMAVDTHVFRVSHRLGLSSDATASKTEATLVKKFKNNLRTLHQGMVLFG
RYICKAKNPKCDECFLASYCKSKESFKV
>Tmden_1446 DNA mismatch repair protein MutS-like
MFSSDIDSILNNKDKLLTQTYFELQRYFEKKYGKDTVVFIEIGTFFEVYE
VNNDEEQVGKAKEIAELLNIQLTKKNKNIVENSDRNPLLAGVPALSFDRY
LSRLIAEQKYTVIVVKQRGTPPKISRYISQIVSPGTNFDYIVDNDDNYIV
SILIDKHRDIYEVGYSAIDVTTGKTWLYESHGTSEDPSYALDEIFNLLNV
YRTSEIVVTFLDGVEDQRHAMQYLEIAQHYHYSINNQRPRVEFQNRLFCE
VYQIKSLLSAIEHLDLERSPMISESLATLIHFVIEHDIHIVQKLDLPKII
DNRRYMYLGNSALEQMGVISKDRNEFTLLKLLDKSATAIGRRLLKERLLN
PIIQKEELERRYNLIDKVSLHVRYLDEVMRGIYDLERLSRRLYLGRLHPF
EMNHIYDSMLSVKELVGYAKKHKIQKTPFSESEVDEFLRDISKSVDLDVS
RRFTTNSVDENFLMNGVDEAIDTLVKENQTMLIAFEDIMAKIELLVGNSN
SNSSNVALGLLEKEGYYISLSKNRFSMIEKEFYKDEDFKKFSVKKLTNNV
KITSAFTDNLSDLIMKNRRKIVVLAKERFIQLQTLYEKRYALLFDRIISY
VADLDVGVSSSKVAQMYKHSRPTIVEVEREENFIQIMQLRHPLIEIQERS
GIYVVNDVVMGNRAYLDLPHPKTVMLDLSVHDGHEINGVLLYGINSSGKS
SLMKSIGLATLMAQAGFYVSASAMRFSLFDSLFTRIVSRDNLAKGLSTFA
VEMLELKNIFNRATLRSLILGDEISHGTETLSGVAIVSSAIIKLSKLRSI
FLFATHLHQLSTMKEIRALKNVVDLHLSVEYDEVEDKLLFNRVLQSGSGS
SIYGLEFAKSLHMDSDFLDIANSIRKRLAKDFDELELLVKKKSSKYNKEL
YVTKCVICGDMAEDVHHIKHKSLADEDGFIGHFHKNTKHNLIPLCKEHHK
KIHEGKIRVDGFVMTSNGLELKFEEQLSKAEPKKETTPEINEPKKFILDD
WE
>Tmden_1967 Helicase-like
MAKKNKKNSKINQKIKKYFDDDPFDVGVARVSTQTLSELFNYLGIYDIEK
SQDMLLKMARVLWSEADSDIRVDIFNFFAHNGTVYKATSRVEPSLERNEK
IESLISELNVIEQEAKALHEAFSDVRSKKITIEKMESKLSHIRFSFKKER
LQKRVDGVFDIDDSIEFNASLKYALFGQNFHKILTLNTKTFEYEHLRDGD
EDELSNEIEKAKELSTLKKQQEIDSFIKNLKDPHPHLSQKEILHALRVVP
PKSKLSYPMLKESVIHSVVNGALGEVEIDISDEELLVLLPQSVKLPHSNR
EQLYTLEVHIELNSLLEDIWKGENVDFSATIEEFKKEHEEHFLNDLTSLV
DECRSYATLLHLSNEVLYDKVYDVLLELLSASLNLSPKIARKSVKRFIYS
ISEEIAKKQRYELLARTIREFKNLFPLARDMRRKLTLHIGPTNSGKTYQA
MQKLKSADTGYYLAPLRLLALEGYEDLRDDGISASLITGEEQIVDEDATH
ISSTIEMVNFDVDVDVCVIDEVQMLDDRDRGWAWANAIIGAPAKEIIMTG
SINAKEAIIALAEYLGEELEIIEFERKNPLILLDSPTHEKDVEANTAIIA
FSRKDVLKLKQVFSKHFSVSVVYGNLSPEVRREEARRFRSGETQVLVATD
AIAMGMNLPIKTILFSKAEKFDGVNDRTLIPSEIHQISGRAGRYGLHEKG
YVGALSGDVLNIIKKNFNKEAKSITIPFRVMANLDHIKLVGTILEEKSLH
EILKFFVKNMEFDGPFVATNLDDMLEISTLVDTYNLDLVTKYHLACAPMT
LKSPYIVSAFESYLNTLEKNMPVAYVAPVLSGAYAQTTDELLRAEDMVKE
ISLYLWLSYRFSDFFIDANRARASRGVLNKFIENTLQQSQLATKCRMCSA
PLPPNSPYGICQACFKKNYAGQGVSNRGYRKK
>Tmden_0024 hypothetical protein
MSNYEITIKHNKHRIHPCPNDKKLSLLALLLEQNSTLNILVASSQDRELI
KEVAGAKNVTVALDDELTKAADLMCDLLISYDLPSAEIYMSRLRRAKEGA
IILLDISEQKNLYPIETILKRVIRQDTVLGYEYAPQEKMKIAQKSLQKEK
GVYAFDPDAPQKPLYSKKQTEYKKTFDKPKYDKSNWDKPKRDNEGSERKP
FEKPKYDKPKTDGQRAERKPFDKPKWDKPKFDKTKNDTQGPEHKPFDKPK
WDKPTRDGEKSERKPFDKPKYDGEKKYDKSGKKSNKFLGKDDSGKSKFSG
KSGERNHKYDGKPKESIEAPKNVGRKISIKERKPKDAPSS
>Tmden_1854 DNA mismatch repair enzyme MutH
MELPYDIFNKQSIIEFAKKLKSSTLKKSCNKTILSHEYSGKGSFGQILEK
FYFLYAPNSNAEADFPEVNLELKSSPLKQLKNNQFRAKERLSLNIINYQD
IVHQNFETSSFWKKNENLLLVFYLYENDTNVLDYVIKLVDEWTFPSIDLE
IIKQDWKRIKQKVLDGKAHELSEGDTFYLGAAPKGGKGGNPREQPNSTLT
AKQRAYSLKQGYVNHIIASISGNSSVYGKLIQSTEITKDKTLEEIVVSKF
ESYYDKTIEDILAMLNINLNLKAKNFYANLTKAILGIELNKEIEEFEKAE
IIVKTIRLKDNNLPKEDISFPNFKYENIVNETWDESEISNILGHKFLFVF
FQFENKKLIFKKAQFWNMPYKDILEVEKVWARTKEIVQSGDIVKDIKTNK
SGNKIRYTNFPNKKFNAVSHVRPHAINADDTISLPVRDKLTHLKEYTKHC
FWLNASYVKNEIYLKSL
>Tmden_0957 DnaB-like helicase-like
MKSNTNYSFDCLIGIERAILSTLITYPEVDKINEAISIIEANDFYFEQHG
LIFNTIIDQYNNDRPIDEITVYLRNKAKIQESYSLDVIAANPLASLTDYL
KQLKFYSLERQITVVAAKVKEGDFKKINDLQVLQDKMESLGDIRNLKPFT
DKFEAYISSLDLDVEKIKNKKVEYLYDNFLVKNDIIMIVARPGTGKSLVS
VALCNMLLSEDKVKRVFYLDGDNSELTIKTRNIHHLKEKFGNRLNYLVEL
SRSSFMQVINELKKIDLTDCLIVFDSIKNFITGDRNNHKDVTELMNILKI
LRKNGATIIFLHHQNKLQKEFNSEFAGSSAFAEDVALAFELRKNEDKQTY
ILIPIKDRNNTSDYIAFKYNQDNTLTKVDVDYAMETNEDLEMKEEIIRFI
ASSKEKPKYSDILSTLTDAGYNKDKANKIIQNGKDKYWKATRIPRQNNKL
VFELIDNQDSQDNPINRGL
>Tmden_1694 Excinuclease ABC, B subunit
MKNQPNFKVVSPYQPAGDQPEAIKILSDSILKGNRYQALEGVTGSGKTHT
MARVIENVKMPTIIMTHNKTLAAQLYSEFRQFFPNNHVEYFVSYYDYYQP
EAYIPRQDLFIEKDSAINDELERLRLSSTANLLSYDDVIVVASVSANYGL
GDPEEYENMVQSVAIGDVIAQKKLLLRLVEMGYSRNDSYFDSGHIRVNGE
SLDIFPPYFEQEAIRIEFFGDEIEAIYTFDTIDNKKLEEHKQFTIYATSQ
FSVRQEKLAVAIKRIEEELDDRLAYFKKEGKLVEHQRLKQRVEFDLEMLQ
TTGMCKGIENYSRLLTEKKIGEAPYTLLDYFALHHKEYLVIVDESHVSLP
QYRGMYAGDRARKEVLVEYGFRLPSALDNRPLMLDEYINKAPHYLFVSAT
PSKYELELSAVKAEQIIRPTGLLDPVIEIKPSTNQVEDIHDEIKKITLKN
ERVLITVLTKKMAEALTKYLADLGIRVEYMHSDIDTIQRNQIIRSLRQGE
FDVLIGINLLREGLDLPEVSLVAIMDADKEGFLRSETSLIQTIGRGARNS
NGRVILYANKITTSMQKAIDTTNARREIQDKHNKIHGITPTTTIRKLDEN
LKVEEYGDIYQKNKKMDKMPASERKAMVTQLSLKMKEAARELNFEEAARL
RDEIAKIKKL
>Tmden_0211 AAA ATPase
MADFTHLLRPSNFDELIGQDHLSKDKAPLRVLCQKGVLGHSFFFGPSGTG
KTSIARIIAKTMELPFYEFNATSIKIEQLRAIFEQYKNTLQKPLIFIDEV
HRLAKNQQEVLLPVMENNSALIIGASTENPFFSLTSAIRSRSMLFELHHI
SNEALSRLLRRALDSSDITCSDEALEYLIKSSGGDARSMLKLLEFASNIG
THITLDILKSLRPNALSVGSSEAGVHYDLSSAMIKSIRGSDMDAAIYYLA
RLIDGGESAEFIARRLVILASEDVGNANPQALTLATSAMTSVSKIGYPEA
RIILSQAVIYLCASPKSNSAYLAIKSALSAVNDGVMLDIPKNITQNSKGY
LYPHDFGGYVKQNYLSKPLKFVTLKPIGYEKKMVDWIESIKKI
>Tmden_1593 transposase
MLNSGFKRNRHSFYNLNYYLVVSIFEGKKIIYDTLEENLKNIILQNIDKH
KCKLVDITIEEQSKVIIHFSAPPHIKLSSFVNNLKTVSSRLIRKDFKSLL
ERKDMGSHFWAMEYYIYT
>Tmden_1344 DNA ligase (NAD+)
MKKEQYIKAVELLNLYSYHYYVLDDAITTDEVYDKLYHEVLEYEESHKED
ILKNSPTQRVGDTVSEGFSKAPHLSRMWSLEDVFDSDGLQKWLIKTYKLD
SNISFYCEPKYDGASLNLIYENGELSQAITRGDGEVGELITQNVKTIRSV
PLSIEHKEKIEIRGEVVIFKDEFEKINQTRLKDGEALFANPRNAAAGSLR
QLDSSITASRNLVFLPYGVGENFLEHKLLSQKMEYIYSLGFKKPPFCATC
KDFNEIEAVYQEMSRNRDSYPMMLDGMVVKVDEIAAQIDMGYTVKNPRFS
VAYKFPAVEKITTIKEIILQVGRTGAVTPVAIVEPTNIDGVVVERATLHN
FDEIQRKDIRINDHVIILRSGDVIPKIIKVLTHERDGSEVEYKRPTICPV
CESELLDEGVLLKCQNLTCEARVINSIIYFASKPCLNIDGLGVKIVEALF
NSGLVKSVVDLFDLTLEKLLTLEGFKEKKAQNLLDALGSAKGCEYWRFVN
SLGIEHIGEVASKTLSAKFGSGFIDATKDEIVACDGVGEEMAESLLEFIR
VNRETILKLQNILKPLEPLQRQEAKENPFKGKSVVLTGSMSESRDMIKEM
LESLGAKVVSSVSKKTDFVIYGEDAGSKYDKAMDLGVECLNEDEMRSKIE
QA
>Tmden_0610 DEAD/DEAH box helicase-like
MSFEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILAKSDVFATAQTGTG
KTAAFGLGMLQRLRKTSDDKQRALRGLVIAPTRELSIQIYEDLQSYAKNM
GINIAVLVGGKDLESQQKILKEGVDIVIATPGRVLEHVDKGLSLSHVEIF
VLDEADRMLDMGFMKEIRRIHPILPKRHQTLLFSATFSDKVRKLSKLILT
KPAFIETSKKNSTVDTINQVAYLVDTEKKAPLLAYIIGSRNFRQVLVFTR
TKASADLLVVELKKDGLKCGIIHGDKTQANRLKTLNEFKEGKIKVLVATD
IASRGLDIEELPFVINYELPSIPEDYVHRVGRTGRAGRDGMAISLIDIYE
KFDIKDIEKLIGMKIPQEIIAGFEPDPTIRRLDQDELKLKSEHKKVEVKH
ERKPRKKEDGSKKSANYKKPVTTKKRKTSKRD
>Tmden_0561 conserved hypothetical protein
MKSNLIIKKIVAGKFKNKTIKLPSKTTTRSSKAIVLESFFNTIQFEIIDA
TFVELFSGSGSVGLEALSRGAAKIIFMEKNSEALKILRENIAQTDPSLCE
VYGGDTFSNISTVIKNLEKKNHKAYFYIDPPFSTRDGMEEIYNKTLSLIA
TLPKECVKLIIIEHMSTLIIPDEIGTFRVKKVKKFGNTTLSYMQSQ
>Tmden_0088 conserved hypothetical protein
MNNQTIVLPSARSIRNEQLKLEGENLFLAHFITMSDFISRLCIVKDFKIL
DEDSRVLLLLEASDFSDFKNLQIERNFFTFTKNSSYIFKFFQELSAELYD
IKELENSDIYAEFAEHIAILQELHKRYEKLCSERKFLDKIFLPKLYTFNE
EYAKSHEALELHVDGHLTNFEFELLHKCCEFCSVELIFSTSRFNSKMRVK
FAELGIELEVGYRYKISLNEKKIVETKKIIHNKNIVADSFSEPILQAAFV
KKKIYDFIKKGYKAENIALILPDEKFATVLGVFDEKSNFNFAMGEPFTNT
QIYKKLNATCKYIEQDSKENYARLRREGDEFLIKLSAIYMGKSKDVDVLE
FLKEYKESSSSKKEIKIFDEELYKFKNILPFMREMSVKSVINLFMQRLSK
RTLDDVRGGKITVMGVLETRSVTFEAIIIVDFDDSNVPKKSDKDMFLNTQ
VREMANLPTMSDRENLQKHYYEMLINGSKEVAISFVKSKESAGSRFLKQL
NIKENNQHNEQEYASLLFSRAGVNKQQEREISFDYSFRGKTLSATKLKTF
LTCKRKYYYRYIMQLKNHEIPKDMPKEHEIGSDVHKALKELYTKKSSYES
LEELRKDLHKEMSCASGESELEGYLMAVQERRMSVFVQNEIKRFAEGYVV
LECEKSLSVEFGGMVLNGQIDRIDIKENELYVLDYKTGSYPIYTQKNFTE
ATDFQLEFYYLLASTLGQVKECGYYDLKESKIVTEPLLSEKLSILGSHVK
DLLNIEHLNFSKCEDIKNCQFCEFKIICQRE
>Tmden_0121 DNA (cytosine-5-)-methyltransferase
MRNIKVASFFSGCGGLDIGFEGDFETNSTSIRNKSWIQNTNEKKCKVKKT
TFETVFACDIKKSAKIAWESYFKKENVFHLESIVDLIKKAHNNEFIFPHA
DIVTGGFPCQDFSIAGKRNGFNSHKTHSNTYVTDEPSIESRGMLYYWLRE
AISIIKPKIFIAENVKGLVTMGDIKNIIADDFRNINGGYIVLEPRVLNAA
DYGVPQSRERVFFIGIRRDLINDLTINMLINNELSLYPPQTHDYKNDFVS
TSDILSDLPEPEDSSDISHQKYSKAKWYGKHCQGQTEINPAGLSPTIRAE
HHGNIEYRRLSKEHGGKIINEFDLLERRLSVRECARLQTFPDNYNFVSDK
ISASEAYKLIGNAVPPLLGYHIAQHIQSIWDILFLNKSKTEKKVA
>Tmden_0696 transposase
MLNSGFKRNRHSFYNLNYYLVVSIFEGKKIIYDTLEENLKNIILQNIDKH
KCKLVDITIEEQSKVIIHFSAPPHIKLSSFVNNLKTVSSRLIRKDFKSLL
ERKDMGSHFWAMEYYIYT
>Tmden_1622 ATP-dependent exoDNAse (exonuclease V) alpha subunit-helicase superfamily I member-like
MMSISSWQSSAQAENYFQQDLDYYQKNQELGEWHITGEMSNRYQNIAHQS
AITKESYQDFADLINQNLKGNATGNQRAGFDITFSPSKSIDVIYAVANDE
LKKSILQAQDRAVNLALEKASRYITYRMRNENGREHFQNNGLAIAKFQHL
SNRNEEIKIHTHCFIANQTINSKGELVSIDNKQLYDNQKLITQIYHQELF
QEMQKLGFQSEVLDIQKDILEIKGVTQEARNSISTRTAEIEKWLLENRKE
LLRKYPNANESQLRQIATLETRNYKQSHSYSELEEIELKNKNLVENTGFT
KETIHQIQNLEKSNQKILSLDELTQKAAQLTTEHESTFTSEEILSRAIKL
NAIQSYTYDLSTLENAVLNSDIIKLDENIYTTQEMINIEREILTYAQESK
NTAQAETTLDKAEQFLSENFSTMTAGQKEAFSHVLTSKDAILGIQGDAGV
GKTFMLKAVKEFQKLHKKDNLIGLAPTNKAADEISKESGIKGQTIDSFIH
QRQHKQNQIIIVDEASMVDSRKMQKLTDIAQQTNSKLVLMGDTKQFTSIG
AGAIFEQLQAKGAIEVAVMAESMRAKTADMKELYKLTKEQKTDAVLDILE
SKNQFQTIEAEDYSSVVKEYLQDKDNTLLLVMKNQTRQELNELIRDELKK
DNSISSHQILHIQEKQQLDSISVHHYTSYEVGDMVQQAGSYKGSLKSGTE
AVIASVNEELNSITLQDAKGNSKEVNLGEHGDKLNLYKTTQKEFSQNDKI
IFTKKDKSLGLNNGDIGTVKEIKDGFLTVDTGKKEIKINTKEYNYIDHAY
AITNHKAQGQTSERSIFVGDSRLSSQNAFYVALTRAKAHISIYTQDKEQF
RDAVAERQVKRSTLDYNTEEILKRRANELTKIQGLHKSSDRSTAREQKTI
NLLHKLSNSVVVSNIKRLSDLLLQSDTLNNLANRFRRDANITVRPEINVV
GRTQQPTIQIKGESMQTVYDKRREENAKYQEATQEINNQEGEKQNLAREQ
EKESFIDKIDKASELYERVEDIQRYLSDETGIKDIITSEQDLGVLEDMAL
NYDMREITQEALESFKHLAQDVVEVLENPTLEIFKDAMHKAVDMSNLFDK
QLKHTREIENER
>Tmden_0681 Exodeoxyribonuclease VII
MYTLSVSSLNEQIKALLEESFSRVLVEGELSRITFHSSGHIYFTLKDENS
TIKAVIFKANAAKLKFQLQEGLKVILDGAITLYKPRGEYQINCFSISPAG
HGALALAYEQLKNRLASKGYFESSRKKQLPKFPKRIALITSATGAAVADM
LRVAMSRYRAIEIDIYDVLVQGDNAAPSIIRALSLADTKGYDIIVLGRGG
GSIEDLWAFNEEIVADAIFSAITPIISAVGHEIDWVISDFVADLRAPTPS
AAMEMCLPDEKELYQFIDSLVARYEQMISQKLYGVKQELEHISRLYQDHS
IEKKISYKLEEIAQLKLSFTNSIYFKMQSFNKEVESIKIRFPNAIQSRIN
IVQNQVLTLQKMLESNHPRLKTKKGFAQISKDSKVIDIESLIVDEVFDLM
SDRVVISAKVINKKNI
>Tmden_1855 DNA (cytosine-5-)-methyltransferase
MKIPNLFTYNMNELTMNMQTSQSLSIRTVELFAGVGGFRLGLEKTSLENK
SYSVVWSNQWEPSTKTQHASDIYCARFGYENHSNDDISTVDASVIPDHDL
LVGGFPCQDYSVASTLKNSHGIVGKKGVLWWEIYRILKQKKEKAPKYLLL
ENVDRLLKSPAAQRGRDFAIILSSLNSLGYGVEWRVINASDYGMPQRRRR
VFIMAYKNGTKPYLNLQQKTPFEVLSKDGIFAKTFPIKMIQEDDIFSLKL
SDDLVDITDNFNKNTSNKNSFYDSGYMIDGVYYTATCKAEHEGNFSVLGD
FLQDEKDVPKEFYISDEELEKWKYHKNSKSIERVHKTTGHKYLYSEGSMS
FPDCLKKPSRTIITGEGGASASRFKHVVCVDGRHRRLTPVELERLNMFPD
NHTAGVSDSKRAFLMGNALVVGIVEKLGNVLLKEI
>Tmden_0025 DEAD/DEAH box helicase-like
MSFTTLGLSAPILKAIKDQGYTKPTPIQKQAIPIILSKKDILAGAQTGTG
KTAGFTLPLLELLSRDKSSTKKRIRALILTPTRELAAQVGESVSIYGKYL
SFTSTIIYGGVSINPQLSALRKGVDIVIATPGRLLDHLSQKSIDLKDVEF
LVLDEADRMLDMGFINDIKKVLAVLPKNKQTLLFSATYSDEIKKLSDRLL
NSPVLIEVERPNKTAQSIKQIVYPVDKERKRELLVHLIKEGKWQQVLVFT
RTKHGANKLSAQLEKDGISSSAIHGNKSQNARMKALQEFKDGDIRVLVAT
DIAARGIDIDQLPHVINYELPNVPEDYVHRIGRTGRAGSSGDAISLVCID
EHEYLSSIEKLIKTDIQKVWLKDFKPDPSIKAEPINQGGQRGSHKKRR
>Tmden_1297 hypothetical protein
MKKIKITGAFIFIFSIILAFIFNFTSKNISEYNNKIAVMNIQKNFTQEIS
KNIFYSYKHQDDSFQTLDNSIKLFLESMSDEDIGLQKNEKIRKLWNKFYL
HVQNFRDHVKRESIYSNIILEKEIKEIYNINLELILESDLFIEQQIKLFN
KTQNSYKTIQYILFLVLVLLLLYLFTQLKIVMNFIQKFLSTSKEIISNSS
IKTLKPLDIQESNNEIFEAEENFNLLIKKINSSIESSSNSMEYTYKSLEI
VEQNIENLVELIYAMNENSRDKELRKKEDAIIQSFEELGSSMKKLINLKN
ELDDLISYTKS
>Tmden_1557 DNA polymerase III, subunits gamma and tau
MRESSEVLARKYRPINFDELIGQESISQTLSLALDANRLSHAYLFSGLRG
SGKTSTARIFSKALICEKGISHKPCGVCQNCILALENRHIDIVEMDGASS
RKIDDIRDLIEQTKYKPATARFKIFIIDEVHMLTKEAFNALLKTLEEPPS
YVKFILATTDPLKLPATILSRTQHFRFKSIATNKIADHLSHILNLEGIKY
ESEALDIIARSGSGSLRDTLTLLDQAIIYSKNYVDVRTVTDMLGLVDPKF
LQELFNAVFAKDYAKLIQHVKSLEDYEAQMVLDELIAFLKERMYASDALY
STLVLDRFFRILSDAKYLFSINADGSFVLSLIFFKMVEALRIKEVDQMIE
SLQKEIYRPAISCSPTENLPLNTTVQNIVKSVPNLSQSVEFDELLLKIKD
RNFELGECFAKSISFISYDGITLTWESCADEECKKVLTHGYGVIKQLVRE
IFGFETKIRHEACTKEESTLHVEPETPLTEAKIDEPSSMIEEAEFGGSAS
CVTNCQSSDSSREINGADIKDEPMVQKAIELFEAKKITIQSKV
>Tmden_0090 UvrD/REP helicase
MVINNLAYEASAGSGKTFMLVVRYLSLLFMGAKASRILALTFTNKAASEM
QERIIATLEELEHRGELDEILRVTGLSIEYLLENRQRVLDEFLNSHTKIM
TIDSFFTKILRKFSLYASLMPDFSTFSSQHELKLLSRFLKEVSITNQKER
LISLWLSSNKRLSDIFELLDEFYVKFAELKHIEFKKQNIEVFEEEALSYM
SELKTIVTSCPSASSTAIKSVEAKDFEELCSKSWLERESLDYRTFAKCYT
PAMDELLHKIKDAIKNQNRGREQNFFFSLKGLVDTYIKSKKALYMDDNEL
SFSDVTYLVYQILKLLGDDSEFLYFRLDAQIEHILLDEFQDTSILQYEIL
KPLIDEITSGEGIFKNGSFFFVGDVKQSIYRFRGGVSALFESVARENSTH
VEKLLTNYRSQREIVSFVNSVFIDKIKNYTPQLYREAANYGYVEVVQNDE
VLEEVVAQVKSLLALGADIDEIALLCATNRDGSSVKEALEAENIEVVTET
TTKLINQNSVKALLEYLKFHYFGEAIYAHNFFALISQEFRPMCRIDFNRV
ELLQVVKGAIREFSLFSDSFNLLRFLDAISRYNDIEALLFEYERMDVSAA
ASELRGVRVLTVHKSKGLEYEHVIVMDRLTKTPPSREAVIYEYDGLTLEN
IYLRIKGRESVDEKYALALLKEKALQVEDSLNAHYVAFTRARENLIVVLK
SKESIFDILDLRVQKNGVLKCTSKEKNIKKEFIPLEYQELFYGTQSDILE
LEKEQEGDFVSINFGIAMHYMLEMLGEFKTKNIANAKDSMINKYGALLQE
SEIKDIQKRVEMLLENSEFISIVDGVCYREKALRYKNSLRYIDLLVRSKE
GYNILDYKSSNLYMYEHVKQVRSYVKAVEEITKKSALGYIIYLLEDEIKI
VKV
>Tmden_0755 Smr protein/MutS2-like
MPIIAPTKIDLLINQLDLNEHINSFKSFFSRDDSLFMEGDQELHYRYIKS
LDAIEFKAPPKVADFTNIKLHLQKRGVLHFEQIFEIVKVVRYFRYFKNKN
LQSIIGEWMDKFVIEPKFFEVEKYFTHDGKFEENLDETLFALGSRIKEQK
ATINSSLKRLTSSSKITPYLIDSQLHLINDEEALLVRGGFNHVLKGAIVG
RSSSGGFYVSPDSILKAKEQIRYITQEREAIFYTYAKEFSSKLSDLLPFI
NFIDKEFTKFDNYQARVLFAKSKNLSLIKSKKDSKITLEGFIHPALHHAK
PIHVDFSKNILMITGVNAGGKTMLLKSILSAAFMAKYIIPMKLNEHKSHI
GNFKGIHAIIDDPQNVKNDISTFAGRMQQFSKIFEHRDALIGVDEIELGT
DSDEAAALFKVILDELILRGQKIVVTTHHKRLAALMADRDDVELMAAIYD
EQNRVPTYEFMHGIIGKSYAFETASRYGISNKIVNEAKAVYGDNSEKLNI
LIERGSQLERELKQKHKIVDEKLQNITLKELELKEIKESLFKELDREKSA
LKESYEIAINEAKAAARAGDTQAIHRAMNKAKEKLPQTTNEPKIAQIAEF
NIGDNVKYHSKKGVIVAMKDKKEAIVEVDGMRVRVQTSQLKHTQIIKQKP
RTDVNLQVQKRAGLKCDLHGMRAEEANEVLDKFISDALINGWDEVIVYHG
IGTGKLSYAVKEFLKAHPRVKKFEDAPQHMGGFGAKIVTL
>Tmden_0241 Phage integrase
MAKFINSKKYEGVQYYIKADGTKSYYVRYKDEENRLKRVKIGDETDGTTE
VYCKNKRIEILNAQNKGEQPPKIVKNHRKKVLTLNEVADKYFTTKDSSRS
TFDRISKYKKHIAPVLGHRGVTGITKNDLISIQDSIIKEQNLSPQTANMV
IELFGTIFIYGFKEEMYEAVNPTLKVQKFKVRNTRERFLNKLEIEELFDA
AKQYDEKNANGGVLELFTKLALTTGARMESVLNIKKCDIDLQNDIIRLVD
LKNGGEVYSGYITDTTRELLYQKSKAIKFTDYLISFNNNGKKIGARQLQT
RLKPLLDDLFNQGLDVKDRKNRIVIHSLRHTCASQLAMANVPILQIQELL
NHADISQTVRYAKLQGDANKKAIQGVF
>Tmden_0127 hypothetical protein
MNYIGSKYKLSVFLEDEIRAAVEGSLSNKLFCDMFAGIAVVGCEFKQYVK
IAVDGYKVFLEIDV
>Tmden_1678 Holliday junction DNA helicase RuvB
MQRLVEIERFDSEESVEVTLRPSAWNEYIGQEQIKKNLGVFIEASKKRAE
ALDHVLFYGPPGLGKTTLALIIANEMNANIKVTAAPMIEKSGDLAAILTN
LEEGDVLFIDEIHRLSPAVEEILYSSMEDFRIDIIIGSGPAAQTLKIDLP
RFTLIGATTRAGMLSNPLRDRFGMNFRMQFYSPEELSKIISQASNKLNKK
IADEACSEIAKRSRGTPRIALRLLRRVRDFADVANEKDILHSRAQYALDE
LGINSYGFDEMDIKLLNLLVGANGRAMGLSTIAAALSEDEGTVEDVLEPY
LIANGYLERTAKGRKATPSTYKILNVTMPALDDGGLF
>Tmden_0437 UvrD/REP helicase
MEKIFEKLNNSQTDAVKQTEGPVLILAGAGSGKTTTIVSRLAYLIEGIGI
PASNTLTLTFTNKAAKEMRERASNMMSNLAYPPLLCTFHKFGLLFLKFNI
HLLGRQNNFVVIDSDDKKRIIKKINSELATPLIASEISRYKNSLLTPDDA
YKQAEFFNYQQIAKIYEEYENYLLENNLVDFDDLIALTFKLLDENPELAR
TTSDKYRYIMVDEYQDTNELQLKLLQKLCSTHNNICVVGDDDQSIYGWRG
AHIRNIMEFDQDFIGTSVFKLEENYRSREPILKVANALIEHNRSRLGKKL
IPTRGGGEDITILNSSDENEEARKIATKVNKLLDSGVKAEDIAVLYRVNV
LSRSIEDGLNRAGIAYKLVGGLRFYDRAEIKDLISYLRVITNFHDDFSFK
RIVNKPKRGMGKASVDKIELAAHANETSIFEYIEKIAITDLETLVKSKNA
KTLKKFVKDIRSVANAAKESTYNFIDILEDTFHLKDIYKGLPDEVERVLN
MDEFYGLFRDFIKNSPSASLDEFLNELTLQSEQDQVEGDSIYMMSIHASK
GLEFDHIFIIGLEEGFLPLVGDGSDLEEERRLGYVSFTRAKDTLTLSHVD
SRFYKGRRSDLQKSRFFNEAGLCEGSLIVEKNTAFKKGDLVRHKIFGTGR
VNGVSKSGREFKLNINFAGTKRDILASFVERL
>Tmden_1562 Uracil-DNA glycosylase
MIDLKIESSWREVLLDEFQKPYFNSLKEFLVGEKQKYTLYPHSSNIFAAF
ESTPFESVKVVILGQDPYHGVNQAHGLAFSVNDGVPPPPSLCNIFKELHD
DIGCEIPKSGNLMSWAKEGVFLLNTVLSVRASEANSHKNRGWEVFTDTVI
RLLSEKKENLVFILWGAPAGAKASLIDEKKHLILKAPHPSPLSSYRGFFG
SKPFSKTDEYLISKGLKPVEWCI
>Tmden_0368 Primosomal protein n
MHYYNIALINSPLEPFSYESSRMLEIGKKVKVKVKSRELFGVVIATCEKP
EFKTSEILELCDSFYSQQQLQLANFISSYYFCSIGEALGVMLPYSDKEWI
NLSTCKSISKNIELSSKQQEALEFSKTHKVSLLFGDTGSGKTEIYMRYFQ
EMLLLEKRSIFLMPEISLTPQMGKRLKVHFGDNVVMWHSKLTPLQKRKAL
ESIYNGEAKIIAGPRSALFLPIKDLGLIVVDEEHDDSYKSSSRPRYSARD
IAIYMGKLYGVNVVLGSATPSVGSYVKFPHFRLRGGYFTSQKKFIYERSA
ESLSPLVIDNLEKSLEKKEQAILFLPTRANFKYLICQDCGYTHKCTFCSV
GMSVHQKTRSLRCHYCNFAQAIPNICSECKSTNLTSSRLGTSEALSQLQE
KFSEHKVGQLDRDVVTTSKKLSHVLKSFNDREIDILVGTQMLSKGHDYHG
VTLAVVLGLDNILNQSDYRAREKALSTLIQVAGRSGRKESAKVLVQTFNE
EFFSAYIDRYEDFLEDEKSFRAELYPPYKKLCRILFSHKNGIKAGDAMNE
MQERLRSFANVEIVGYKKCAIERVADKYRFEILLRSDKSTDIIKAVLACR
NSLAEIDMDPIEFG
>Tmden_1651 NUDIX hydrolase
MIKKELYRPNVAMIIVSNAYPSSRDIFLAQRNDLLDVWQFPQGGIDDGEE
IYEALFRELKEEIGTDKVEVIAEFPEWISYDFPPKIAQSMKPFIGQRQRY
FLVKLNEDAVINIQTDEPEFRDYKFVSVDEVLSLSASFKKSVYECVITYF
KKEGLL
>Tmden_1229 hypothetical protein
MKNIKTTLAILSCSIMLSSNILADATLPPPIQDVVKMEKLAGPAGPFTTK
ENFPKDYFLMPKNLPYLVGMTLYDNSSAKLNLSKEQIEAILKIKDELMAK
AAKKALVIKNLELEMMKEVSFKLNSKKATELYPAVDEIAKLRAELTKIHL
DCIEKVKAVLTPEQFEEMLDYGVINMF
>Tmden_1661 Single-strand binding protein
MYNKVILVGNLTRDIELRYSQGGMGIANTGLATSRKFTVNGEKREEVCFV
DITFFARSAEIANQYLRKGSKILVEGRLNFDQWVDQNGQKRSKHTVVVET
MQMLDSKNSAAAPSDEYPVQQNQPNQSYQQPSYQQPSYQQQPQSYQKPSA
QKQMPSNSSIPEIDIDEDEIPF
>Tmden_0406 DEAD/DEAH box helicase-like
MNVTKEQKEKFKKLGISSCSELSLIIPSLYEDLRLSNKLSPHSMQLIDAT
VEAIYRAPNSLQITFFVHNFSHTVTGVIFRPKPYLLHQFKVGQRDYYYGM
MECKGGTCSINMPKKITIIGAITPKYKSALRSDVMLRFVQNLLTKENLLL
DGLREDVACELLKLHFPQSVIPNIKELDEKILRALKYTELFVYMRELAKK
RRYYPSLSLTCKSYDEWLQTLPFRLTNEQIKAIEDIRADFQKGLSARRMI
VGDVGSGKTMVILASALMNSPNRSILMAPTTILANQIYEEAKKYLPMMNI
ALVSSKNKNMDLSEYDFIIGTHALLYRELPIATLVMVDEQHRFGTAQRNL
LEKLVSSQNSSSKISDAKSHFLQFSATPIPRTQAMIEMAHIDVSLITSTP
FKKEIKSRVIHKSDFKELLEHIKVEIALGNQVLLVYPLVEQSEVLEYQSI
DEARSFWEARFTNVHVTHGKDKDKEEVLREFDKQGDILIATTVVEVGISL
SRLSTVVIVGAERLGLSTLHQLRGRVSRTGLKGYCFLYTNQNKSERLDKF
VDTTSGFDIANLDLKFRKSGDLLRGHNQSGNQFRWVDLAEDEEIVKLVKD
DLLK
>Tmden_1698 hypothetical protein
MHNFFKSLKKELVRKQIFLTREVAASKIFEYIEMFYNSKRRHSYLGHISP
NEFENMSLLLSFGVRNLCLPLFFKK
>Tmden_1931 ATP-dependent DNA helicase RecQ
MKYKLLKDNFGHNSFRELQEDGVNAILDGRDLLMILPTGGGKSLVYQLPT
LLMDGISIVISPLIALMQDQVSSLRAQGMSAQMISSAQSRDEVDEIIAQA
QNGELKFLYLSPERLNNQATIAMLRGLNINFFVVDEAHCISQWGHEFRDD
YRALGNLRANFASTPICAFTATSTEHVTEDILRELRFQNPLLLKGKIFRK
NIFISLERRVANGHEQLKLFLARHKKESGIIYVSSRKKAEELSLFLNKSG
YKSLPYHAGLPQHVREQNFKIFVNDKIDIMVATIAFGMGIDKSNIRFVVH
MSLPKSLENYYQEIGRAGRDGDDAEVIMFFNAADLTQHKRFLDDIQNEEY
KEHLSQKIETIYKYATSEICFHKQIAEYFEDTLDECLTGCDNCANSKEIR
ENITKEAQMILSAIYKTEQKFGKNYIIDILRGSKEQKLLANSADKLSVYG
IGESRAKRVWYVILERLLELKIVYLGEFSVLKLTQEAAETLRGKKEIFIR
ASRLHVSDKAKRVKPRDEEDFDAELFEKLKAKRTQIAGELKVPAYIVFSD
KVLKNLSVAKPQNRENMLEVNGVAEKKFQLYGAQFLEVFNK
>Tmden_1743 Phage integrase
MEFLKYLEDIRGYSDLTIKSYDESITEALKSIEFVQDKNHILLNLMPYRI
KISTLNPKTISKKLSAIRSFADYLNDNEISVMLKGDDSIKVAKTLPKPIS
HVNIIEAINLASLDERVVVTLFYTLGLRISELASLELKNVSDEWVRVIGK
GSKQRDVPLLEQSKKVLDEYLSKSPHKKFVFEKNGEKLSENSLRYIITKV
FRRVGLKVSPHQLRHSFASQLLNGNAPIADVSELLGHSSMATTQIYTKLG
SALKQQNYNMAHPLCGVKES
>Tmden_1618 Phage integrase
MFLLRGRRSNEVRTLHFEDIDFENKLYTVRDKNNKTRKNMTYMLDDELIE
HLEIIRESKGLIFKSPITGEKLTAIPKKLWARIQEEVGIKMRIHDFRHLL
GFTLVNNNVPLEYISKALGHSKITTTQRYSNQKELMAKEAVDVFLGIVKK
>Tmden_1891 hypothetical protein
MSKKIVAIGLVTLLFSSLSAYELKSNMLLLNAELSEVQRAFISSDQTGVE
ESVKRFAKHAQDLLGNKEKFSSMLPEKKKNKANEAVMSAQIISHNVQIIL
DAIENKHNQSGQVRREEAQRAYTYIEHACFRCHNIVRDEY
>Tmden_0683 hypothetical protein
MAYFDNAKVGDKVFGLVFGAGEIAQIFENSHYKIMVNFKNGYEVPYTEDG
IPGWGNFNKQTLYFKNDIDLTDVDFSPISKVLTIKKIIKLKDKKKLQVRL
PSGVWKKVKKAEESYVEDLLEREKYHMFRKKPEKKD
>Tmden_0003 DNA gyrase, B subunit
MENYGASNIKVLKGLEAVRKRPGMYIGDTGHRGLHHLVYEVIDNSIDEAM
AGYCNTINVTLTKEGTCRVSDNGRGIPTDMHEGEGMSAATVVLTVLHAGG
KFDKDTYKVSGGLHGVGVSVVNALSSDLKMTIQRNGEIHEQNFKKGIPQE
ALNVIGTTKKTGTTIEFSPDPSIFTETVIFEYEYLARRFKELAYLNPFIT
IIFKDERTNVKEEYHFEGGIAQYVTDLNKKQEVAKVFVFSSKIEDIEFDI
SLMYNDTYDEKVYSFVNNIRTPNGGTHEAGFRAGLTRVISNYNTQNGAAK
EKDVKISGEDTSEGLIAVVSVRVPEPQFEGQTKGKLGNTYVRPLVQKATY
ELLSKYFEENPIEAKAIVAKSLMAARGREAAKKARELTRRKDSMSVGTLP
GKLADCQSKDASICELYLVEGDSAGGSAKMGRDRVFQAILPLKGKILNVE
KARLDKILKSEEITNMITAMGCGIGEEYNEDKLRYHKLIIMTDADVDGSH
IQTLLLTFFFRHFRSVIENGYLYLAQPPLYRYKKGKKEIYFKDDRAMNDF
LIENGIESLEGQSVGHNDLLSYFKMVDHYRGSLEALKKRYALVELIRHFI
ENPDLIGLDIDNMYKKIEEFLALGGNNILTKTVSQDSIHIFVQTKGGMEE
LLINDDLFGAPHFAEASFVYRKIKEWNLDFNEDILVVLDNIIEYAKKGSY
IQRYKGLGEMNPDQLWETTMTPENRVLLQVTIDDAELASDTFTLFMGDEV
EPRRNYIETHAKDVKHLDV
>Tmden_1355 Site-specific DNA-methyltransferase (adenine-specific)
MALSLIEELPKIVKEGRAEAARILERINSGNALALQTNELVLPSKDVSGL
FRGEMPSSDESEWKNRLIYGDNILVMQGLLAGDATSGLESMRGKIDLIYI
DPPFDSKADYRTKITLPNINLSQKPTVIEQFAYADTWKDGTVSYLKMIYP
RLVLMRELLSEKGSIYVHIDWHVGHYVKILLDDIFGKGKFRNEIIWHYST
LGRPKDKFAQKHDQIFVYGKSDDAFFNTEEAKIPYSDDYIESHFRDIDDN
GKKCRKRFDAGKWRIYYPDEGMIPNDVWDIPYENSMSKERVSYATQKPVA
LMERIIKSSTIKGQLIADFFGGSGTTAVVAERLNRQWISSDIGKPSIMVQ
RKVSTPHHKHRFSACNVSKREGYISLIT
>Tmden_0587 conserved hypothetical protein
MKFEVIQNEYSALLKEIQSYFKNSQNSIHKARNEIKIIDFKQKSLVIKSF
KVPHLINRVVYTFFRDSKAKKSYENSVKIAQFVPKPIGFVELKKSGLLHE
SYFVSENFEYDFTIREPLLESVFLDREKIFKAFAEFTFKLHVEGIFHLDY
SPGNILIKKESDGYIFKIVDINRMEFKPLNLDKRLKNFSKLWAKDEDLKI
IIKEYARLYKSDEERSIKIALQYSQAHKNRKNRKKRLRGEAVVD
>Tmden_0946 hypothetical protein
MDNNNFEIIKQALGNVIYTQKTHEMAITRKSNYVTCIKWLNIILVGIVFF
VLFLQIFNQDDKDYLYAGIFFTVIEALFLIFQLSFNPEKEVLEHRNTANR
LWLMREKHLNLLTDIKNEIFDFNQNAIKRDELTNELNEIYKNAPRTNSDD
YEKASKALNGNQKPKADEDEMINFLPKNLQS
>Tmden_0484 putative dUTPase
MDKILLMLQLQATLNEATNGDGWTSGVTKNSKVINWKRCIYMECAEMIGS
FSWKHWKNIDQEADWANLQIEVVDVWHFIMSLAIENYANSHKGGVEELAL
DISELENFCKIDTKNELFASQDEIMQKVESIIFNVLNRDNFELEKLIEEF
FDLVVMSGLDLETLYKLYVGKNILNQFRQDNGYKDGSYIKVWAGEEDNVV
MKRVLDESSNFSPNELYNELTKLYLSLNKS
>Tmden_0340 HhH-GPD
MNRVYHIYKTLYEMYGPQGWWPILGHGYHKLDYTFPHNEDEIFEVCLGSI
LTQNTTFTSVVKSLNNLHVKSALNVYGIENMNILELKEAIKPCGYFNQKT
RYILEFIKFYKSLDGKVPTRDALLSVIGIGEESADSILLYGYNQLEFKVD
AYTKRLLSELGMIEPKTKYRDIKNLVETSLKECIKNEVELLKTYQEFHAL
LVAHGKSYYSKKPYGSGCVLKEVI
>Tmden_0141 DEAD/DEAH box helicase-like
MNNAKEFSNLNLTKEMLHNLNEIGYTKMSDIQEQSLPFILDGKDVIAQAK
TGSGKTAAFGIGLLHKLQVKKFRVQALILCPTRELSDQVARELRVLARFS
HNIKILTLCGGVAFGPQLGSLRHGAHIIVGTPGRILKHLKKDTLSLEDVD
TLVLDEADRMLDMGFSEEINEVLEFVPKNRQTLLFSATYTDEILDISKSI
QNGAIHVKTTSTEIANKIEERFYEVNNADKIKTVIDILSNFRPQNVIIFA
NTKVEVDEIAKRLQESKVDALAIHGDLEQYDRNDVLVQFANKSCPVLVAT
DVAARGLDIKELSMVINYDLPHSLETYTHRIGRTARAGAEGLAFTLYSAY
EEEKVDEYKNDNRIFESSKTLKTVSGFVMKPQNITLVIEGGKKDKVRAGD
ILGALTGEAGLSGSSIGKIDIYDRQSYVAIEASKIDEAHDKLKSGKIKGK
KFSVWIL
>Tmden_1779 ATPase
MNFLNEIVDKLESKKKVFLTGGAGVGKTTLTKSVISHYEQDAKKVAKLAS
TGMAATLIGGQTLHSFLDLGIAKDIEELQKNSKYEIKTKVQKLISSMDLI
VIDEISMVSDTLFEMIALRLEQSNFKGMLLVVGDFLQLPPVVRGYSEVHF
AFESAIWEKFNFEIVELTHIYRTDDKEFIELLAKVREGFVDEDVHNELNS
YIKPLPQDLSEFTFLFAKNDSAAMHNRAQLALLDSELHTKEAQIIKHVKS
VKDADVERFMDDARIERTLEIKIGAPVLFTRNSWNYFNGERGVVVNIDAT
YVYVQKSDLIVIKLERVAQNKSHWVQKSVDAKLQFVEESLFSIFQFPIKP
SYAITIHKSQGMSIVDLVIQSNEIFAPSQFYVAISRSSNPKRLNLIAPKR
QWRDIIFVNNKAMRFVKNSAML
>Tmden_1244 DNA polymerase A
MSKTVTIIDTFGFFFRSFYALPQHLKNSQGFPTGLLTGFTNFISTLQKQH
DSDYIVFAIDTKGDSFRKEIDPNYKANRQPPPQELSMQLPIAIEWIDKMG
YKTLGFDGYEADDVIATVVRFAKEKSYNVRVVSHDKDLFQLIDDGRVVLV
DAIKKQVMDEDECFKKYGISPKQFIDYQSILGDSADNIPGVKGIGKVGAE
KLLIEYETLDNIYANIENIKPLGIQKKLLEFKEQAYMSKKLVTLSCSVFE
SFDFEEFKMDIENPFLNIYDELVKYEQNGILRALNAKNLVHVEAVKKVEA
EAQTNKKVNFRAVLIDDAKELKRVLSELRDDTIVAFDTETTGLDYENDSL
VGFSFCFNEDEAYYVPIAHFYLGVGEQISQEDAKIAIKKIFNSRVVGHNI
KFDLHFVIRFLGEGELDIFADSMILAWLINPESALSLDKLSEKLLEHKMI
TFKESVKKGETFASVALEEACNYAAEDAYITLRLYYLFLEMLKDQGAEHL
IEEAKEVEFPFIKTLLKMEMHGIELNSLFLEQFLAEAKDSLSELTKKIYE
LASLEFNINSTQQLGNVLFEQLGLPTSKKTKTGYSTDEKVLNSLLGEHEI
IPYLLEYREVYKLYSTYIEPLLKLSQQDKESRIHTSFVQTGTTTGRLSSK
NPNLQNIPTRTALGTKIREAFVAPEGKKLIGIDYSQIELRLLAHFTQDRV
LVEAFMQDKDIHMQTAIALFGEEDAPLKRNVAKTVNFGLLYGMGQKKLSE
TLKITTAEAKEIIERYFSSFPSVKSYFRSIVDFSKEAGYVETLLKRRRYF
DYESASPMFRAAYEREAVNSIFQGSASDIIKLSMNKIHKLIEDEKLNAKM
LLQIHDELIFEVDTSEAEILGEKFKNIMQNIMPLNIPLKASMKIGDKWSE
LK
>Tmden_1658 SMF protein
MREIEFEIPELLSMKKYPKELFYSGNISLLDRVKISIVGSRKPTKYSRLF
IEKLSSSLSNNGVCIVSGGAMGIDATAHLGATSSSTIAVLPCGVDVRYPA
VNKNLLCEIEKNGLLLSQFESGSSATPWSFVVRNELVVALGEVLVVGEAD
VDSGTMRSVEFALKMGKKIFVLPQRLGESDGTNQLLRNKRAEAIYDIDEF
VSRFSKNKVTISGIKDEFMEFCSTNPTYDEALSKYPQRVFEAELNGDIKI
KNGLVIRL
>Tmden_1839 DNA (cytosine-5-)-methyltransferase., Type II site-specific deoxyribonuclease
MNNKKFTFIDLFAGIGGFHQAMHELGGECVFASEIDIYARKTYKYNFKKY
SPELFENGLFNEDIKTIMPEEIPDFDLLCAGFPCQPFSQAGKKYGFDDNH
KSERGNLFFDIAEIIKVKRPKAFFLENVRGLVNHDNGNTFKTIQHILTEE
LGYSFYHQIIKASDYGLPQLRPRTFMIGFRDEDILKGFNFPPKIPLKFNM
SDVWGGECSREIGFTVRVGGRGSNIDDRRNWDAYLVNGEVKRLSFKEAQK
IQGFPDDFHFPVSPTHSMKQLGNSVAIDAVKAVGSKVIEYMNNLNKRGKP
MNKTNNKGEWSELFAFIKILLEQKLLLSDKELNPTGDFFKINKITTENLD
LEFIPVSDFKIKSIHTKTKEEAEIDISSIITDETLTNILNQIKAGSGTFE
INDFEIIQTALGFSIVKGGNSSQKADIVLDIEHNTFVKENEGFGIKSYLG
SKPTLLNASGNTNFMFEIDGLDNSKISEINQISTATKLRDRIVAINKNGG
TFRYLKAEKDTMNYNLKMVDNVLPEIIGYLLMAFYGNRISNLSDIVNYLC
DYTDILTHLDIDDKAMLINKLKKFLVDILLGFFAGEKWNGSYASNGTIVV
KENGDLITFHIINMENLKNYLFENIKLDTPSTSRHKFGTIIQDKTKNYFK
LNLQLRF
>Tmden_0505 Histone-like DNA-binding protein
MNKAQFVELVQASGNYKTKVEAEAAIKAFTEAVASALVKKEDVSLVGFGS
FGASLQKGKSGKVPGTDKTYTTKDKMVPKFKAGKGLKDRVAAGK
>Tmden_1723 Phage integrase
MKKKKPTLKRIKESVTEQEYKKLMSAIRGDESLRPNTKDNLLRAFTILYF
TGLRLNELQQMKLLHIKELLDTGETKLLLLKTKSERKLFAGDEFQKQLKK
LLSITTDTDLQIKVISKGSSQNKREGIHPFTFIAQVNEVMKSILGDGYTS
HSFRQGLITEMGAKGINTKIISKFIGHSDVKTTMGYIKPTDADVKGAMIR
>Tmden_1945 DEAD/DEAH box helicase-like
MPFSKLGLSQNILQALKQNGFTKPTPIQERVIPLVLERHDIMAKAQTGSG
KSASFILPILELLSRDSYEGKAKIKVLVLTPTRELTQQIVEAFNTFGAFM
SKKPKVVGVIGGEGIGEQLFNIQKGCDILVATSGRFLDILSKKQMILSHV
DFFVLDEADKMLDFGFAEELELILEALGQKRQNLLFSATYPPKMLFIASK
IMQNPIEVSVEDEEPTVESVVQRAILVSRENRAPLLRHLLKSEKYELVIV
FMSSKRAADNIAAKFRKHGFSADSFHGDLHQEDRNYTLEEFKTKKLQILF
ATDLVSRGLDINDITCVINFDLPRSSADYIHRIGRTARAGKAGMAISFID
HEDEAHFRLIEKRSNIRLKREQIEGFELTTEAPKREKGKEPIKGKGKSKK
DRAREAAAGIK
>Tmden_1683 conserved hypothetical protein
MHEQTTLIRLNDKISAIVEHYKMLKEENEALRLESVRLRAEGELKSQEIS
KLIEQNALKDSEIESIVDKLESIMA
>Tmden_0235 hypothetical protein
MALSEEDKLWIEKIRKDTEREERELKRRGIIPYTEDELEEINAKKAEMRE
QARFAAEALKKVRVSKIGFESSHYVDLTDGIDINLAMDLTSTTYINPATG
FPMISGIGGLDSGGNTYGF
>Tmden_2104 Crossover junction endodeoxyribonuclease RuvC
MTILGIDPGTRKMGYALISLEKGKIALIEAGLIKIKAEELQFQIPQMVEA
FEGIFKNHKIDEVAIEDIFYAHNPKTTIKLAQFRGAIMLMLIQQFGQFSE
YTALQVKKALTGNGKATKEQVAFMAKRLLNIKKEIKPLDITDAIAVAITH
SQRVRLKQQ
>Tmden_0109 hypothetical protein
MSSDKSQITQSVNFLSYIKSRIDELKKLVGIVDQKEPISFKISEFMQEVN
SSLMKLPKEYKNLYELKVAEGDFFINREAEIQKLHLSYENWFKDRFVTCA
IIGEKGCGVTSALNSFLKKIPQIETIKADLSQKIYTDEEYFAFFNSLLKT
EDIKNNKGLIDFLNNTQEHKIIIIENLHHMFLKKVGGFESMEMLFELLSY
TTKKVLWIGVFTPQTWNYLDKTIAISNYFTSEIVMEQLGYETIKEIILKR
IDCESTRLEFIPNEQTIESKTFQNLSQSEKQSYLQEKFFKLLHKLSNGNI
SLAQLYWIRSISATNDNGLGVEEIDDFDYSFIKNLSSEALFTLQALILHD
GLSIKDFSTVMHESLSQSRKILMPMLERGLLIQPNKKYNINPAIYKPVYD
YLSSKNFIH
>Tmden_0448 Excinuclease ABC, C subunit-like
MLKCSDDTLYTGITIDLSRRLNEHNSSQKAAKYTRTRRPLEMIYFEEHKD
KSSASKRELEIKKLSRDKKLELIKQCGFL
>Tmden_0684 Methylated-DNA--(protein)-cysteineS-methyltransf erase
MIKDSRIVSTPIGYMLAVASESALLYLDFIDEKVETQNSNNPILLKLEQE
LRDYFVKKLRTFSIPLSPSGTAFQRAVWDTLLKIPYGLTLSYADEAKLFG
NPKATRAVANANGKNPISILIPCHRVISSDGSIGGYSGGGIWRKEFLLSL
EGVEK
>Tmden_0375 DnaB helicase
MQDNLYNLAFERSILSSIVFEPSQFDELSSQLKKDDFYLPAHQDIFGVMT
LLFQKDQPIDEEFIKKELIKIKKFDENVMLEILSANPISNTKAYVEEIRD
KSLKRHLLTLTTEIKRVTVEEELSSQEVIDIVEKKLYEITQNNQTSDFKD
SPKMTFDTMTYIKEMKARGNTVLVGVDTGFHELNKMTTGFGKGDLVIVAA
RPAMGKTSFILNTVNTLIMQGKGVAFFSLEMPAEQLMLRLLSIQTAIPLQ
KLRVGDMSNDQWGSLNGAIDKMNSAKLYVDDHGSININQLRSKLRKLKNQ
HPEIEIAVIDYLQIMSGVGNQDRHLQVSEISRGLKMLARELNMPIVALSQ
LNRGLESRNDKRPMLSDIRESGSIEQDADIILFVYRDDVYLYKEEKEREK
EAKAKGHEFVSTYVEREEEDAEIIIGKQRNGPTGHVKLIFQKKLTKFIDS
HNHIKSIETVYENVDTRSAHISISNDTISMPPL
>Tmden_1566 Transcription-repair coupling factor
MSQSRLFNYYKTTKKSDLEILLCEDAKEAQELKSVALFFGKEVIVFPDFR
ATHGDDLRVYKEELHQLFSSLRNYYSAKVKPLIISPLKTLLFEMPQESLL
KSRVIEFGEKIEFRAFQQQMLLWGYNFVDMVQVEGEISFRGDIIDIYPPS
SKMPLRISLFDNEIEQIKYFELESQRTQKEELESFELTPAFFSLDESEFD
MLNERVQKSEFDSLVKDIASLGLWHLDDSGVNFLESKNVKLSRELNAPLI
DAYALNKPTISRECFNVEVLEESDDFKEISVSDLHAFLKVHKAKKTTIIA
SNEAVIKQAGLFDVSGLKILYAPYILNIMGKDELVISLNKQTKIKRRRKS
SILLDDLKVGDYVVHEDYGVGIFEGIEQTEILGGVKDFIVIKYIGDDKIL
LPVENLDAIDRYIASGGSVPVLDKLGKGSFGKLKESVKKRLLEIAGQIVN
TAAARELITAPKINVDEDELRAFQKLSGFLYTDDQSQSINEIITQMSSGH
IMDRLLSGDVGFGKTEVAMNTIFAAYKSGFQSALIVPTTLLSAQHYRSLH
ERFDALGIKCSKLDRFVSAKDKTNIIKALSSGDLDVVVGTHTLFDLDFKK
LGVVIIDEEHKFGVKQKEKIKELYHNVHLLSMSATPIPRSLNQALSSIKT
MSQLLTPPSQRQPVRTFVKAYEEKLIKEVLLREIRRGGQIFYVHNSIDHM
PIKLGELKALLPSLRVVMLHSKISATDTEKELLKFEAGEYDLMLATSIIE
SGIHMPRVNTIIVDGADRFGMADLHQLRGRVGRSNVEGFAYFIVNDKETL
TDEAKKRLLALESNSFLGSGSVLAYHDLEIRGGGNLVGDAQSGHIKNIGY
SLYLRLLEDAIKLLSNQMEVEKAKVDIKLTISAFVSDEVVKEDRLRIDIY
RRLSSCIDSVEIYEIQEEVIDRFGALDAPTKQFFELMVIKVLSLSKGIKS
VSNYGQNITITYMDEKKESIKSDSKDDDDIIKAVLKYLRA
>Tmden_1722 DNA invertase gene, RlgA
MKKIGYIRATNKEEIEEQSELLIAAGCSKIYVEPKENLNYQSKVKLAQVV
EILHCGDILAVTRLSILSSSVQTLLELMFTFEEKHIILQATKQQFISSNS
YNLDELLFFLSEFIEDIRVEKQAYGISKAKDECRRLGRPPKLSAKEVLKA
IELKQNNTSRQVANRFRVGRSTLLRHIARSKKSA
>Tmden_1852 ATPase
MNETLIGQIDKILFEEEAFFIAVLKSGEKISGSYYESEVSHLKESAITLK
GHWEEHKKYGKTFKFEYIKVNQNELFFFLNKIIKGFTKKLSADLIEHFGN
DGLIEVLDNDIERLLEFKGIKEKKLKKIQASWKKFRSMREIGEFLTPYDV
TPAFLTTIATAMRDVEEPCAKIKNNPYILTSINSIGFKRADELALKMGVK
KDDENRISSAMDYVLLNYCEQQGNSCVAKEILFFELDELLTFSDKSYLYE
ASLVERVSEGSIVLMKNERVSPARLYDAEKYLYDEFKRRAKLDNGGFTKD
LDLFLSEHDLKLGDEQKEALKKINEGSSILFLVGYAGTGKSTTSRSILDL
LNTKYDKKEIITCALSGIASQRIADTTGYESATIQSLLVKFEERDEFPYS
VVLIDEASMINSSLFARLVRKVSKSALLIVVGDDAQLPPIGAGNVLSDVL
TLCLAPIVKLTKIYRQSEDKAITVIANDIRLGVVPEYKREYEDFEFVDVS
MQNYYALKNQLTQAELSSQREENSAQIVAVIAHKVVESIEKARYRLSNKQ
IKEYLNYFQVITPMKGGTLGSNNLNIVLQNYFNPNPKKCVKKGGVEFRLM
DKVVHTKNENMTSWSSEGFKNSEDSAQRRIFNGMSGLLFKIEEDDEQAFV
FYPNEDVVVVYEYEELRSHLMLSYALTIHKVQGMEYDIVVIPMSFSHYIM
HNTKLIYTAVTRAKHKCILVGESMAFESACKKLDITARDTVLLEL
>Tmden_0482 hypothetical protein
MVEINWEDFKFFKQYSNKKNDNFEILLDFLKNYCKITSPKEMFETMLNDE
TAQLMLKKREMYTLEDLERHLYKDFNAK
>Tmden_0559 Exonuclease
MLIFLDVETTGLENGDKICSIGIICVSETAIFSKYELVNEGKKISSKASS
INHITNEMIKDKPKFKDSKTWEILHENNNQSSTIIAHNVNFDLKMLLQSG
FLWQGKVVDTLRVTKHLIPECEEFSLQFLRYELKLYKDEKKEAAKYSAEI
SAHNALSDALHVKLLYEYLLEIKEHDELVALSLKNVLIEKFNFGKYKGRY
IEEISMCDRGYLEWMLLHVADLDEDLRYSIRGVL
>Tmden_2055 conserved hypothetical protein
MNNQLSPELYRVIDANINRLKEGIRVVEDIMRYKDNNKELSHKLKNLRHM
ATIQESIELLKNRDSINDVLRQTIKSEMNRSSLNDIIIANFKRAQESARV
LEEIYKLHSSQYSENFKHIRYELYTLEKDILLSN
>Tmden_0399 hypothetical protein
MLFRIIIFLFCFFYANAQTLQQKLDEKQEKISNYVIEVFDDIDKKIAYWV
HSEDGNITTQSQTKNSVDEFFKGEKYIKETNKSYLQFRLKSLLQSKGDSS
ITPYIKAQIPLQRSQKNFQIFFSEIKKDALSQSVSQIEDEKSAQVGVSYF
TPMQYDIKSKYSVGLRSLSTYASARYSKEFEFNKWLIEPTQEFKYSTKYN
FSEETNIYFDRALDESSLFRTTLHRKTQENTRGYDYALSLSYYLTPSYKK
GFGVSQIFWGNSKYSCDMYPEEYSGISNYATQFSWRQNILRKWIAYEVQP
IVSFHREHNYEANYMLRFYLDFYFGNID
>Tmden_0955 transcriptional regulator, XRE family
MYLKEFREKLNLTQNELSSILDIAQTTIARYENDKVKPTSTVLLKYINEL
NANPNFLFLGIEPHLLNNLPKLDSSNMDLLNDITLMMSQEHLREKLNKIL
IDEIIQRFEKQNDSLVAKLLEIVKMDDPVKTRPFLFLYYIFQLIEKDFTD
TPKEISDYKQYLGDVITNYKVVTWKNQPLFTEKIKSEIRDFLDVKLTTKE
CELLVKNYKNTLEMLEQKMPPSMIKYHRNSFK
>Tmden_1565 DNA (cytosine-5-)-methyltransferase
MTYIMGRSLFNMDINKEESFRAIDLFAGIGGIRLGFEQAFGEKIEFVFAS
EIDKYARETYYANFGETPHGDITQIDEKNIPPFDILLAGFPCQAFSVAGH
RKGFEDTRGTLFFDVMRIAAYHKPKVIFLENVKGLVGHDKGKTFKVILET
LKELGYYVEYQILNAKDYGVPQNRERIYIVGFLDNEVEFEFPKPIEKYVK
VGDILEDKVDEKYTISDKLWAGHQRRKIEHKAKGNGFGYSMFNENSIYTS
TISARYYKDGSEILIEQKNQNPRKLSPREAGRLQGFPNSFNIKVSDVQAY
KQFGNSVSVPVIEAISKNIFKIINNTDL
>Tmden_2025 Ribonuclease H
MKKITLFSDGSALGNPGPGGYGVILRFGDKEREISGAEEHTTNNRMELLG
VIEGLRALREPCAVDIVSDSSYVVKGINEWLGSWIKKDFKNIKNPDLWRE
YIAVSKGHKINAIWVRGHDGHVENERCDILAKNEALKIKEAKK
>Tmden_2027 hypothetical protein
MSHLPSKLNSYWLWREVSSKLGLSNPTYRYWKNTPNLKLNNKYLFIQKRT
LPQKYEHIENILTDLSGHLPIKYASDQLHVSEHLFSYEKMRLHKEFEYKF
VEDVKFVNIKKFFTEFGIKVNKDSIIQLAKIKDLDIGPECTFYNLKNDYG
IVVYN
>Tmden_0280 Ribonuclease H
MTLNLCGIDEAGRGPIAGDLVVAGCILNSHVDGLNDSKKLNEKKREALYE
IIIKNSSYHIVKFSAKEIDDNGISICMKKALLEIMKNLTCKEYLFDGNTN
FGINNLPTMIKADGKIPEVSAASILAKVTHDRNIINDAKKYPQYQFQKHK
GYGTALHVEMIKKYGYCEIHRKSYKLKALNTLVTPTLF
>Tmden_1607 Exonuclease
MIFDEPTFSLDAKSIHKLSTKGLSIKTLREQIHDDLDFLLQLWHAQGLEI
VKQSGSFYFTTAFKPMSESTFCIVDIETNGSKIEKHQIIEIAALKVKNGL
VVERFESLVECHEINPHITEITGISTNETIDAPNLKKVMYDFRTFLGDAV
FIAHDVKFDYKFISLSMQKIGLPPLLNRSLCSLSLAERTIESYRYALSYL
NTIFNLHPEATHHRAMSDVITTYELFKLSLNSVDKEVKTVEDLIRFSKEA
KRLKRPKFDPRLEDQE
>Tmden_1901 Protein of unknown function UPF0102
MSRAKGNVAEDRASLFLLENGYMIVDKNFYSRFGEIDIIAYKEEVWHFVE
VKSALDYELAVQNITKSKLSKLIKTGDVYLKKNALHVDYMYDAIIVTPEN
IWHLENITL
>Tmden_0596 conserved hypothetical protein
MNEIITTDNQMIQDKIYTLRDEQVMLDKDLAELYGVETKRINEAVKNNQD
KFQEDFFFELTNDEFSILRSKLSTAKFAKTRTNPKVFTEQGVYMLATILK
SKVASQTTVLIIKTFANMRKFLLSNASIFQRLDSLEVKQIQSKLESDEKF
NKIFNAIEEKGIPQKQHIFYNGQIFDAYLFVSDIIKNAKTSIKLIDNYVD
ETTLILFTKRDANVSMTIYTKTISAQLNLDLQKYNAQYPNIEIKKFDLSH
DRFLIIDEKEIYHFGASLKDLGKKWFAVSKMDIDSFEFMEKLK
>Tmden_0240 conserved hypothetical protein, putative DNA helicase
MEIDISKISNLDNKVSNEPIIIEAKFSPKFNLAFLQNSVLVLLELNVVNN
SDQPLSNLTLTLTSTPTFIKAKVWNIETIVAQQRFDIHDRNIQLDNAMLL
DLNESESVHISLSLTSNENVIATFEQTLELLPRNQWSGISHMPEMIVAYV
QPNDTKVEHLLKKAASILREHNKEASLNGYIGGSTKAWEISSAIWTAIGS
LGLDYALPPASFEQTGQKIRTPGQIWETGLVTCLDSTLFICAALEQCGLN
PIIIFTKGHSFAGVWLKDEESSTVIIDDITAIRKRIKLKELVVFETTFLT
KRPCPSFTKAIEQGEKQLAEGEDDMFEMIIDIKRARMQRIKPLSSLDSKA
NATPLVQEAESLDPIFDEAPDLPDDEILHNEEISSKPTDRLDMWQRKLLD
LSLRNNLLNFRTNKRMIKLDAPNPGQLEDRLADGNTIRIKPRPDLMNGSD
LRDKTIHESRELEDIHKVHALDALQRNEVFVSVNTEELESRLTELYRTAR
ATLSEGGSNTLFLAVGFLSWTRSDKDDKRYRAPLILIPVILNRKSMREGF
SLVLHDDEARFNPTLVQMLRQDFELELPIDQRELPKDDHGLDISGIWRQV
SNAIKDIKGWEVSEEVVLSTFSFAKYLMWKDLIDHTEQLKQNPVVRHLIE
TPRDPYPSNVTFTDPKKLDDDYAPDKTFCPLPVDSSQLSAVMASAKGKDF
VLIGPPGTGKSQTIANIIAQCLAEKKTVLFVSEKITALDVVYRRLRDVGL
GDFCLELHSNKARKLDVLQQLNRAWDAKGNSDTEEWKREAQKLKILRDEL
NQFVKHLHKTYPNNLTPHQAIGQILIGEHFPKLGLQWSSPDTHDIETIER
LRALAERLDVNAREVGNIKDNNLNIIAHDEWSPSWQEKIIETSALMITKI
NQLELASDTYFKALGFSSSSFELRVRNGLSLFAQALPQAAGYDRRFVLRP
DIGRLMDDLDRGIQYVKQHQNIFKQLSVPYHGDITKIVVEELNEQWNNAE
QTFWPISWFKKRSVHNKLGVYIQGKNKPNVPTDLLKIKELQVLESNINNL
SDLTHKTSALWTGLNTRLNEAESVQAFHKTLSEAIVSLANDAENLVIIKG
ALEKLFGDGNTLLETNGSVATAGNNYHKALNEFNDTFEYFISTAGISSTE
LLEKVEDNLSKLSEMCSEIPAMKPKLHTWCGWRKAHKEAVNAGLNPLVLG
IEQGKVNLGEVRNTFETDYCRWWLNSIVDNDDILRTFIVAEHEKRIADFK
ILDERFTKLTSEYIYAILCADLPEQEGVKKSSEWGILKREMQKKRAHKPL
RELISLMPTTITKLTPCLLMSPLSIAQYLSTDIALFDVVVFDEASQIPVW
DAIGAIARGKQVIMVGDPKQLPPTSFFNRASTAGEDDIDEDIEVDLESIL
DECLGANLPTLNLSWHYRSRHESLIAFSNHRYYAGGLVTFPSPVTDDRAV
SFQHIKDGVYEKGGTRTNRPEALALVDELVSKLKERKFQDSKLTIGVVTF
NSEQQRLIEDLLDEARRNNPDIETYFAEDALEPVFVKNLESVQGDERDIM
YFSIGYGPDLTGKISMNFGPMNKSGGERRLNVAITRARYELRVFSSLKAE
QIDLSRTQSGGVRDLKHFLEFAERGSRAIMGNNSDSINNHDSKFEEAIAN
ALKEKGWEVHPKIGVSSFRIDLGIVDPDSPGHYIAGIECDGATYNRATTA
RDRDKLRENILKGLGWNIFRIWSTDWWQDRSGSLEKLHMQLESILNQKRE
EVII