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2024-05-08 03:57:39

Gene list

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COG category: Replication, recombination and repair
Organism: Geobacter metallireducens GS-15, GS-15

Number of genes found: 210

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Geobacter metallireducens GS-15, GS-15
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Gmet_2538 IstB-like ATP-binding proteinchromosome CDS2879045 795 - 0.584906
NA Gmet_2298 DNA polymerase III, delta subunitchromosome CDS2604542 1005 - 0.585075
NA Gmet_3396 Transposase, IS204/IS1001/IS1096/IS1165chromosome CDS3810050 1224 + 0.553105
NA Gmet_2794 Transposase,IS111A/IS1328/IS1533/IS116/IS110/IS9 02chromosome CDS3158194 999 - 0.606607
NA Gmet_0001 chromosomal replication initiator protein, DnaAchromosome CDS261 1353 + 0.580931
NA Gmet_2586 Integrase, catalytic regionchromosome CDS2937906 1026 + 0.580897
NA Gmet_0020 conserved hypothetical proteinchromosome CDS27303 186 + 0.61828
NA Gmet_1310 Transposase, IS204/IS1001/IS1096/IS1165chromosome CDS1471606 1224 + 0.552288
NA Gmet_0050 conserved hypothetical proteinchromosome CDS62682 456 - 0.649123
NA Gmet_2376 Transposase, IS204/IS1001/IS1096/IS1165chromosome CDS2685798 1224 - 0.553105
NA Gmet_2943 Recombination protein O, RecOchromosome CDS3333458 735 - 0.681633
NA Gmet_0093 hypothetical proteinchromosome CDS116890 540 - 0.512963
NA Gmet_0045 Transposase,IS111A/IS1328/IS1533/IS116/IS110/IS9 02chromosome CDS58122 957 - 0.528736
NA Gmet_2587 IstB-like ATP-binding proteinchromosome CDS2938928 795 + 0.584906
NA Gmet_2166 Transposase, IS204/IS1001/IS1096/IS1165chromosome CDS2446114 1224 + 0.553105
NA Gmet_0070 HhH-GPDchromosome CDS84643 672 - 0.653274
NA Gmet_2039 putative transposasechromosome CDS2282539 1041 + 0.536023
NA Gmet_1215 DNA polymerase III, alpha subunitchromosome CDS1366263 3468 + 0.617359
NA Gmet_0746 Holliday junction DNA helicase RuvBchromosome CDS819634 1017 + 0.644051
NA Gmet_1333 Transposase, IS204/IS1001/IS1096/IS1165chromosome CDS1490891 1254 + 0.535885
NA Gmet_3436 conserved hypothetical proteinchromosome CDS3857647 264 - 0.598485
NA Gmet_2994 Xylose isomerase-like TIM barrelchromosome CDS3378520 858 + 0.642191
NA Gmet_3003 Transposase, IS204/IS1001/IS1096/IS1165chromosome CDS3387860 1254 - 0.535885
NA Gmet_0265 NUDIX hydrolasechromosome CDS296892 603 + 0.661692
NA Gmet_1797 DNA topoisomerase I:Restriction endonucleasechromosome CDS2012333 1068 + 0.527154
NA Gmet_2377 SNase-like nucleasechromosome CDS2687129 558 - 0.643369
NA Gmet_1973 HhH-GPDchromosome CDS2203609 657 - 0.547945
NA Gmet_1296 Smr protein/MutS2-likechromosome CDS1457674 273 + 0.637363
NA Gmet_0857 RecJ exonucleasechromosome CDS943526 1737 + 0.603339
NA Gmet_2489 hypothetical proteinchromosome CDS2831957 753 - 0.420983
NA Gmet_1170 NUDIX hydrolasechromosome CDS1293744 414 + 0.565217
NA Gmet_3228 Excinuclease ABC, C subunitchromosome CDS3633756 1845 + 0.63252
NA Gmet_1654 HhH-GPDchromosome CDS1859653 858 - 0.564103
NA Gmet_3219 Excinuclease ABC, B subunitchromosome CDS3618425 1998 + 0.631131
NA Gmet_1398 Transposase, IS204/IS1001/IS1096/IS1165chromosome CDS1567009 1254 + 0.535885
NA Gmet_1848 Exonuclease VII, large subunit:nucleic acid binding, OB-fold, tRNA/helicase-typechromosome CDS2059258 1362 - 0.558003
NA Gmet_2273 IstB-like ATP-binding proteinchromosome CDS2576756 795 + 0.584906
NA Gmet_0320 IstB-like ATP-binding proteinchromosome CDS356583 795 - 0.584906
NA Gmet_3006 Integron integrasechromosome CDS3390705 1005 + 0.625871
NA Gmet_0745 DNA recombination protein, RuvAchromosome CDS818987 600 + 0.615
NA Gmet_2582 Excinuclease ATPase subunit-likechromosome CDS2933596 255 - 0.635294
NA Gmet_2093 Transposase, IS4chromosome CDS2356911 1170 - 0.532479
NA Gmet_2865 Ribonuclease HII/HIIIchromosome CDS3249333 642 - 0.563863
NA Gmet_2279 Phage integrasechromosome CDS2583217 1245 + 0.498795
NA Gmet_0323 Transposase, IS204/IS1001/IS1096/IS1165chromosome CDS360024 1224 + 0.552288
NA Gmet_0132 Transposase,IS111A/IS1328/IS1533/IS116/IS110/IS9 02chromosome CDS159269 957 + 0.528736
NA Gmet_1718 Transposase,IS111A/IS1328/IS1533/IS116/IS110/IS9 02chromosome CDS1931263 957 + 0.528736
NA Gmet_3429 Transposase,IS111A/IS1328/IS1533/IS116/IS110/IS9 02chromosome CDS3848986 957 + 0.528736
NA Gmet_2745 Helix-hairpin-helix motif proteinchromosome CDS3103348 603 - 0.635158
NA Gmet_0005 DNA gyrase, subunit Achromosome CDS6570 2574 + 0.632479
NA Gmet_2240 Transposase, IS4chromosome CDS2532959 1077 + 0.58403
NA Gmet_1069 Transposase, IS4chromosome CDS1190735 1077 - 0.58403
NA Gmet_3009 conserved hypothetical proteinchromosome CDS3393087 858 + 0.668998
NA Gmet_0670 Transposase,IS111A/IS1328/IS1533/IS116/IS110/IS9 02chromosome CDS736870 957 + 0.528736
NA Gmet_1878 DNA uptake protein and related DNA-binding proteins-likechromosome CDS2093445 579 - 0.490501
NA Gmet_0283 Transposase, IS4chromosome CDS314162 1077 - 0.58403
NA Gmet_1118 Integrase, catalytic regionchromosome CDS1239805 1026 - 0.580897
NA Gmet_3025 protein of unknown function DUF342chromosome CDS3410362 1641 + 0.602681
NA Gmet_2983 DNA polymerase Achromosome CDS3369686 2679 - 0.650616
NA Gmet_2864 protein of unknown function UPF0102chromosome CDS3248978 369 - 0.542005
NA Gmet_0800 Transposase, IS204/IS1001/IS1096/IS1165chromosome CDS880277 1224 - 0.553105
NA Gmet_0675 Type III restriction enzyme, res subunitchromosome CDS739811 2697 - 0.639229
NA Gmet_2717 ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQchromosome CDS3068824 1806 - 0.67608
NA Gmet_3058 Helicase-likechromosome CDS3451721 2982 - 0.500671
NA Gmet_0002 DNA polymerase III, beta chainchromosome CDS1837 1122 + 0.602496
NA Gmet_3081 hypothetical proteinchromosome CDS3477079 1170 - 0.519658
NA Gmet_2728 NAD-dependent DNA ligase C4-typechromosome CDS3083292 2016 + 0.660714
NA Gmet_1894 Exodeoxyribonuclease V, RecC subunitchromosome CDS2113008 3183 - 0.669494
NA Gmet_3141 Transposase, IS4chromosome CDS3538011 1170 + 0.532479
NA Gmet_3236 TatD-related deoxyribonuclease:Amidohydrolase 2chromosome CDS3642090 759 + 0.673254
NA Gmet_3142 Resolvase-likechromosome CDS3539364 612 - 0.411765
NA Gmet_0398 putative RNA methylase:THUMPchromosome CDS440319 1170 + 0.62735
NA Gmet_2565 Transposase IS116/IS110/IS902chromosome CDS2912147 1077 + 0.54039
NA Gmet_0958 Transposase,IS111A/IS1328/IS1533/IS116/IS110/IS9 02chromosome CDS1067247 957 - 0.528736
NA Gmet_2515 Transposase, IS204/IS1001/IS1096/IS1165chromosome CDS2854168 1224 - 0.552288
NA Gmet_2724 UvrD/REP helicasechromosome CDS3077250 2037 - 0.642121
NA Gmet_1115 conserved hypothetical proteinchromosome CDS1238150 552 + 0.503623
NA Gmet_0081 Transposase, IS204/IS1001/IS1096/IS1165chromosome CDS98843 1254 + 0.535885
NA Gmet_1683 Transposase, IS4chromosome CDS1890539 1170 + 0.532479
NA Gmet_1002 Transposase, IS204/IS1001/IS1096/IS1165chromosome CDS1115829 1254 + 0.535885
NA Gmet_2539 Integrase, catalytic regionchromosome CDS2879836 1026 - 0.580897
NA Gmet_0939 AAA ATPase, central regionchromosome CDS1040745 1326 - 0.625943
NA Gmet_0744 Crossover junction endodeoxyribonuclease RuvCchromosome CDS818496 495 + 0.632323
NA Gmet_1789 Integrase, catalytic regionchromosome CDS2004048 1026 - 0.580897
NA Gmet_1608 Histone-like DNA-binding proteinchromosome CDS1808018 291 + 0.57732
NA Gmet_3223 UvrD/REP helicasechromosome CDS3623160 3228 - 0.682776
NA Gmet_1893 Exodeoxyribonuclease V, beta subunitchromosome CDS2109402 3603 - 0.637802
NA Gmet_1070 protein of unknown function DUF83chromosome CDS1191984 615 + 0.590244
NA Gmet_3422 DNA polymerase III, subunits gamma and tauchromosome CDS3839009 1749 - 0.651229
NA Gmet_2484 Transposase, IS204/IS1001/IS1096/IS1165chromosome CDS2826935 1254 + 0.535885
NA Gmet_1349 ATP-dependent helicase HrpBchromosome CDS1508874 2529 + 0.667062
NA Gmet_1184 Transposase IS3/IS911chromosome CDS1316254 258 - 0.488372
NA Gmet_2671 Phage SPO1 DNA polymerase-related proteinchromosome CDS3019102 762 - 0.674541
NA Gmet_0994 SNF2-related:Helicase-like:Zinc finger, SWIM-typechromosome CDS1103862 3429 + 0.654127
NA Gmet_3043 DEAD/DEAH box helicase-likechromosome CDS3430237 1359 + 0.668874
NA Gmet_1185 Transposase, IS204/IS1001/IS1096/IS1165chromosome CDS1316646 1095 + 0.555251
NA Gmet_2256 hypothetical proteinchromosome CDS2554872 1170 + 0.519658
NA Gmet_3140 DNA adenine methylasechromosome CDS3535829 1917 - 0.494523
NA Gmet_2488 Transposase, IS4chromosome CDS2830722 1077 + 0.58403
NA Gmet_1833 Histone-like DNA-binding proteinchromosome CDS2047814 282 - 0.503546
NA Gmet_0048 NUDIX hydrolasechromosome CDS61422 522 - 0.651341
NA Gmet_3039 Transposase, IS4chromosome CDS3425233 1170 + 0.532479
NA Gmet_0094 Transposase,IS111A/IS1328/IS1533/IS116/IS110/IS9 02chromosome CDS118485 957 + 0.528736
NA Gmet_2568 DnaB helicasechromosome CDS2915682 1371 - 0.625091
NA Gmet_0708 hypothetical proteinchromosome CDS778677 1170 + 0.519658
NA Gmet_2796 IstB-like ATP-binding proteinchromosome CDS3159674 795 - 0.584906
NA Gmet_1892 Exodeoxyribonuclease V, alpha subunitchromosome CDS2107631 1785 - 0.634734
NA Gmet_0090 Methylated-DNA-(protein)-cysteineS-methyltransfe rasechromosome CDS114582 510 + 0.688235
NA Gmet_2840 Transposase, IS204/IS1001/IS1096/IS1165chromosome CDS3219511 1224 - 0.553105
NA Gmet_3050 Superfamily I DNA and RNA helicases and helicase subunits-likechromosome CDS3439706 5373 + 0.483901
NA Gmet_2810 Transposase,IS111A/IS1328/IS1533/IS116/IS110/IS9 02chromosome CDS3176072 957 + 0.528736
NA Gmet_1072 protein of unknown function DUF48chromosome CDS1193442 1035 + 0.618357
NA Gmet_3047 transposasechromosome CDS3435106 1911 + 0.52067
NA Gmet_3282 Integrase, catalytic regionchromosome CDS3691420 1026 - 0.580897
NA Gmet_0942 DNA repair protein RecNchromosome CDS1045594 1665 + 0.66967
NA Gmet_3283 Transposase, IS4chromosome CDS3692527 1014 - 0.585799
NA Gmet_2580 Excinuclease ABC, A subunitchromosome CDS2926792 5679 - 0.694488
NA Gmet_0891 DNA topoisomerase Ichromosome CDS981935 2277 + 0.624945
NA Gmet_0362 Single-strand binding proteinchromosome CDS406141 444 - 0.666667
NA Gmet_3527 Transposase, IS204/IS1001/IS1096/IS1165chromosome CDS3959762 1224 - 0.552288
NA Gmet_3420 RecR protein:TOPRIMchromosome CDS3837754 594 - 0.632997
NA Gmet_0229 Transposase, IS204/IS1001/IS1096/IS1165chromosome CDS261186 1254 + 0.535885
NA Gmet_1441 UMUC-like DNA-repair proteinchromosome CDS1609858 1224 + 0.632353
NA Gmet_3108 Flagellar export FliJchromosome CDS3506763 447 - 0.626398
NA Gmet_2526 SNase-like nucleasechromosome CDS2869419 516 - 0.579457
NA Gmet_2464 TatD-related deoxyribonuclease:Radical SAMchromosome CDS2788435 1821 + 0.62603
NA Gmet_0714 NUDIX hydrolasechromosome CDS786612 897 + 0.681159
NA Gmet_2053 DNA mismatch repair proteinchromosome CDS2304458 1869 - 0.648475
NA Gmet_1790 NUDIX hydrolasechromosome CDS2005109 465 + 0.580645
NA Gmet_2507 Transposase, IS4chromosome CDS2846500 1170 - 0.532479
NA Gmet_1920 conserved hypothetical proteinchromosome CDS2146376 270 - 0.548148
NA Gmet_1117 IstB-like ATP-binding proteinchromosome CDS1239014 795 - 0.584906
NA Gmet_3481 Transposase, IS204/IS1001/IS1096/IS1165chromosome CDS3908588 1254 - 0.533493
NA Gmet_1223 Metallophosphoesterasechromosome CDS1378512 1131 + 0.630416
NA Gmet_3448 NUDIX hydrolasechromosome CDS3865597 618 - 0.593851
NA Gmet_0255 C-5 cytosine-specific DNA methylasechromosome CDS285104 996 + 0.671687
NA Gmet_0321 Integrase, catalytic regionchromosome CDS357374 1026 - 0.580897
NA Gmet_2284 Transposase, IS204/IS1001/IS1096/IS1165chromosome CDS2588201 1224 + 0.553105
NA Gmet_0890 SMF proteinchromosome CDS980811 1077 + 0.671309
NA Gmet_0068 NUDIX hydrolasechromosome CDS83027 585 + 0.618803
NA Gmet_1067 CRISPR-associated protein TM1801chromosome CDS1189036 855 + 0.562573
NA Gmet_0046 Transposase,IS111A/IS1328/IS1533/IS116/IS110/IS9 02chromosome CDS59548 957 + 0.528736
NA Gmet_0394 DNA primasechromosome CDS435368 1767 + 0.62309
NA Gmet_2271 hypothetical proteinchromosome CDS2574639 1014 + 0.551282
NA Gmet_2832 conserved hypothetical proteinchromosome CDS3212062 303 - 0.617162
NA Gmet_3187 DNA polymerase B, exonucleasechromosome CDS3587525 2235 + 0.657718
NA Gmet_3281 IstB-like ATP-binding proteinchromosome CDS3690629 795 - 0.584906
NA Gmet_3337 Primosomal protein nchromosome CDS3751107 2241 + 0.651941
NA Gmet_1788 IstB-like ATP-binding proteinchromosome CDS2003257 795 - 0.584906
NA Gmet_3447 Transposase, IS4chromosome CDS3864409 1170 + 0.532479
NA Gmet_0004 DNA gyrase, B subunitchromosome CDS4149 2388 + 0.61474
NA Gmet_A3568 conserved hypothetical proteinunnamed CDS4068 342 - 0.540936
NA Gmet_0089 UvrD/REP helicasechromosome CDS112218 2229 - 0.654554
NA Gmet_0935 Ribonuclease Hchromosome CDS1038344 459 + 0.631808
NA Gmet_1143 Transposase,IS111A/IS1328/IS1533/IS116/IS110/IS9 02chromosome CDS1265809 957 + 0.528736
NA Gmet_3183 Transposase, IS4chromosome CDS3584328 1170 + 0.532479
NA Gmet_3547 Transcription-repair coupling factorchromosome CDS3979334 3477 + 0.644234
NA Gmet_2160 Transposase, IS204/IS1001/IS1096/IS1165chromosome CDS2433529 1254 - 0.535885
NA Gmet_2883 Transposase, IS4chromosome CDS3264165 1077 + 0.58403
NA Gmet_2386 Transposase, IS4chromosome CDS2696877 1170 + 0.532479
NA Gmet_0868 Histone-like DNA-binding proteinchromosome CDS958359 288 + 0.545139
NA Gmet_3090 conserved hypothetical proteinchromosome CDS3490637 1617 - 0.5906
NA Gmet_0003 RecF proteinchromosome CDS3041 1098 + 0.649363
NA Gmet_1438 Excinuclease ABC, C subunit-likechromosome CDS1608477 261 + 0.551724
NA Gmet_0706 conserved hypothetical proteinchromosome CDS776204 657 - 0.637747
NA Gmet_2975 Transposase,IS111A/IS1328/IS1533/IS116/IS110/IS9 02chromosome CDS3362747 957 - 0.528736
NA Gmet_2073 Transposase,IS111A/IS1328/IS1533/IS116/IS110/IS9 02chromosome CDS2332226 957 + 0.527691
NA Gmet_1315 Transposase, IS4chromosome CDS1475970 1170 - 0.532479
NA Gmet_3035 ATP-dependent RNA helicase RhlBchromosome CDS3420212 1317 + 0.644647
NA Gmet_1130 hypothetical proteinchromosome CDS1251650 807 + 0.70632
NA Gmet_0900 Transposase, IS204/IS1001/IS1096/IS1165chromosome CDS989804 1254 - 0.533493
NA Gmet_2272 Integrase, catalytic regionchromosome CDS2575734 1026 + 0.580897
NA Gmet_3102 Transposase, IS204/IS1001/IS1096/IS1165chromosome CDS3500752 1224 + 0.553105
NA Gmet_0747 chromosomal replication initiator protein, DnaAchromosome CDS820657 732 + 0.627049
NA Gmet_2091 Transposase, IS4chromosome CDS2352163 1077 + 0.58403
NA Gmet_2803 Integron integrasechromosome CDS3165949 1350 + 0.567407
NA Gmet_0488 Transposase,IS111A/IS1328/IS1533/IS116/IS110/IS9 02chromosome CDS533869 957 - 0.528736
NA Gmet_0355 Histone-like DNA-binding proteinchromosome CDS397964 285 + 0.592982
NA Gmet_3167 Helicase c2chromosome CDS3563997 2631 + 0.666287
NA Gmet_1073 protein of unknown function DUF196chromosome CDS1194577 294 + 0.537415
NA Gmet_1068 conserved hypothetical proteinchromosome CDS1190026 540 + 0.511111
NA Gmet_1978 Transposase, IS204/IS1001/IS1096/IS1165chromosome CDS2207266 1254 + 0.535885
NA Gmet_1760 conserved hypothetical proteinchromosome CDS1974741 567 - 0.567901
NA Gmet_2163 Integrins alpha chain:Multicopper oxidase, type 2chromosome CDS2437500 3606 + 0.607598
NA Gmet_1783 Phage integrasechromosome CDS1999547 1359 - 0.560706
NA Gmet_3053 SNase-like nucleasechromosome CDS3449164 543 - 0.515654
NA Gmet_1427 Tyrosine recombinase XerDchromosome CDS1597387 888 + 0.591216
NA Gmet_2593 hypothetical proteinchromosome CDS2942698 1170 - 0.519658
NA Gmet_1777 ATP-dependent DNA helicase RecGchromosome CDS1992850 2304 + 0.623698
NA Gmet_2319 DNA polymerase III delta prime subunitchromosome CDS2627221 957 + 0.662487
NA Gmet_1977 Transposase, IS204/IS1001/IS1096/IS1165chromosome CDS2205917 1224 + 0.553105
NA Gmet_2573 ATP-dependent RNA helicase RhlEchromosome CDS2921609 1356 - 0.677729
NA Gmet_2281 Resolvase-likechromosome CDS2585138 651 + 0.552995
NA Gmet_0676 DNA methylase N-4/N-6chromosome CDS742510 1563 - 0.566859
NA Gmet_3056 Histone-like DNA-binding proteinchromosome CDS3450825 213 - 0.568075
NA Gmet_0128 Excinuclease ABC, A subunitchromosome CDS153799 2814 - 0.640014
NA Gmet_0198 RecA DNA recombination proteinchromosome CDS229709 1020 + 0.653922
NA Gmet_2797 Integrase, catalytic regionchromosome CDS3160465 1026 - 0.580897
NA Gmet_2974 MutS 2 proteinchromosome CDS3360327 2358 - 0.681086
NA Gmet_1424 MutS 1 proteinchromosome CDS1590776 2619 + 0.583429
NA Gmet_0723 Transposase,IS111A/IS1328/IS1533/IS116/IS110/IS9 02chromosome CDS796780 957 + 0.528736
NA Gmet_3042 Tyrosine recombinase XerCchromosome CDS3428975 885 + 0.662147
NA Gmet_3057 Histone-like DNA-binding proteinchromosome CDS3451422 294 + 0.472789
NA Gmet_0443 Transposase, IS204/IS1001/IS1096/IS1165chromosome CDS487069 1224 + 0.553105
NA Gmet_0007 hypothetical proteinchromosome CDS11025 540 - 0.512963
NA Gmet_3055 DNA polymerase III, epsilon subunitchromosome CDS3450169 657 - 0.619483
NA Gmet_A3567 Transposase, IS4unnamed CDS2393 1170 - 0.532479
NA Gmet_1417 Histone-like DNA-binding proteinchromosome CDS1586276 276 + 0.474638
NA Gmet_1936 Exonuclease VII, small subunitchromosome CDS2161777 231 - 0.528139
NA Gmet_1206 Formamidopyrimidine-DNA glycolase:Zinc finger, Fpg-typechromosome CDS1352332 804 - 0.669154