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2024-04-29 12:07:27

Gene list

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COG category: Replication, recombination and repair
Organism: Pelobacter carbinolicus DSM 2380, DSM 2380

Number of genes found: 178

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pelobacter carbinolicus DSM 2380, DSM 2380
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Pcar_2501 conserved hypothetical proteinchromosome CDS2940498 516 - 0.540698
NA Pcar_0791 IS21 family transposasechromosome CDS933885 768 - 0.602865
NA Pcar_2470 ATP-dependent helicase HrpBchromosome CDS2909433 2535 - 0.645759
NA Pcar_1995 replicative DNA helicasechromosome CDS2327154 1371 - 0.522976
NA Pcar_0087 excinuclease ABC, A subunitchromosome CDS101160 2814 - 0.598081
NA Pcar_1669 exodeoxyribonuclease VII, small subunitchromosome CDS1949689 225 - 0.524444
NA Pcar_2337 holliday junction DNA helicase RuvAchromosome CDS2732641 594 + 0.589226
NA Pcar_1060 nuclease SbcCD, D subunit, putativechromosome CDS1246576 1113 + 0.595687
NA Pcar_0368 ATP-dependent RNA helicase RhlEchromosome CDS457280 1308 + 0.594801
NA Pcar_0841 Retron-type reverse transcriptase-likechromosome CDS993608 1590 + 0.59434
NA Pcar_2265 conserved hypothetical proteinchromosome CDS2645485 726 - 0.497245
NA Pcar_1788 transposasechromosome CDS2089604 1236 + 0.567152
NA Pcar_0736 uracil-DNA glycosylasechromosome CDS874154 675 + 0.558519
NA Pcar_2728 putative transcriptional regulator, Fis familychromosome CDS3184980 1326 - 0.488688
NA Pcar_1823 putative integrase prophage proteinchromosome CDS2133571 1266 - 0.537915
NA Pcar_0091 transcription-repair coupling factorchromosome CDS107317 3486 - 0.62794
NA Pcar_2425 hypothetical proteinchromosome CDS2853223 1470 - 0.533333
NA Pcar_2493 putative transcriptional regulator, Fis familychromosome CDS2932280 978 - 0.496933
NA Pcar_0376 recombination protein RecRchromosome CDS464256 600 + 0.516667
NA Pcar_0414 ADP-ribose pyrophosphatase, putativechromosome CDS506259 516 + 0.606589
NA Pcar_0534 transposase IS4 familychromosome CDS646060 1551 - 0.548678
NA Pcar_2051 ATP-dependent DNA helicase domain proteinchromosome CDS2388186 1914 + 0.599269
NA Pcar_0803 DNA repair protein RadCchromosome CDS949059 501 + 0.602794
NA Pcar_0001 chromosomal replication initiator protein dnaAchromosome CDS72 1359 + 0.454746
NA Pcar_2679 DNA primasechromosome CDS3131259 1815 - 0.591185
NA Pcar_0005 DNA gyrase, A subunitchromosome CDS6419 2508 + 0.537081
NA Pcar_2124 hypothetical proteinchromosome CDS2475113 306 - 0.444444
NA Pcar_2256 conserved hypothetical proteinchromosome CDS2634514 1110 - 0.589189
NA Pcar_0810 Site-specific recombinase XerD-likechromosome CDS955038 1449 + 0.574879
NA Pcar_0003 RecF proteinchromosome CDS2856 1092 + 0.498168
NA Pcar_1377 site-specific recombinase (XerD-like)chromosome CDS1615835 1002 - 0.491018
NA Pcar_1686 DNA-binding protein HU (DNA-binding protein II)chromosome CDS1968003 273 - 0.490842
NA Pcar_2928 hypothetical proteinchromosome CDS3421849 1644 - 0.471411
NA Pcar_2914 Superfamily I DNA and RNA helicases-likechromosome CDS3401690 1977 - 0.538695
NA Pcar_1084 conserved hypothetical proteinchromosome CDS1272613 1017 - 0.513274
NA Pcar_1795 putative O-antigen biosynthesis proteinchromosome CDS2097450 351 - 0.444444
NA Pcar_0526 transposasechromosome CDS636723 1221 + 0.570844
NA Pcar_2380 ATP-dependent DNA helicase RecQchromosome CDS2803154 1791 - 0.558906
NA Pcar_3038 transposase IS4 familychromosome CDS3549778 1551 - 0.551257
NA Pcar_0570 ATP-dependent RNA helicase RhlEchromosome CDS694183 1299 + 0.599692
NA Pcar_1268 Mn2+-dependent serine/threonine protein kinasechromosome CDS1489053 1401 + 0.556745
NA Pcar_0120 putative transcriptional regulator, Fis familychromosome CDS145819 1494 - 0.451807
NA Pcar_3000 6-O-methylguanine DNA methyltransferaschromosome CDS3508111 537 + 0.590317
NA Pcar_2834 putative glycine betaine/choline/proline transport system permease proteinchromosome CDS3312913 300 - 0.496667
NA Pcar_1383 transposase IS4 familychromosome CDS1622664 1551 + 0.551257
NA Pcar_1473 conserved hypothetical proteinchromosome CDS1719718 540 + 0.511111
NA Pcar_0083 hypothetical proteinchromosome CDS97901 333 - 0.561562
NA Pcar_1061 hypothetical proteinchromosome CDS1247685 2139 + 0.612436
NA Pcar_2900 hydrolase of PHP superfamilychromosome CDS3387237 768 - 0.582031
NA Pcar_0623 site-specific recombinase, phage integrase familychromosome CDS750252 999 + 0.586587
NA Pcar_2326 DNA repair protein RecNchromosome CDS2720767 1683 - 0.585859
NA Pcar_0204 ribonuclease HIchromosome CDS262583 459 + 0.568627
NA Pcar_1782 putative transcriptional regulator, Fis familychromosome CDS2085491 978 + 0.497955
NA Pcar_2572 helix-hairpin-helix domain proteinchromosome CDS3020871 699 - 0.573677
NA Pcar_0964 CRISPR-associated protein Cas1chromosome CDS1133267 921 + 0.585233
NA Pcar_1609 ATP-dependent DNA helicase RecGchromosome CDS1879696 2154 - 0.531105
NA Pcar_0602 endonuclease Vchromosome CDS733966 699 + 0.589413
NA Pcar_0540 transposase (class V)chromosome CDS653872 294 - 0.544218
NA Pcar_3129 DNA-damage-inducible protein Pchromosome CDS3649059 1200 - 0.538333
NA Pcar_0239 MutT/NUDIX family proteinchromosome CDS301926 594 - 0.59596
NA Pcar_2218 ribonuclease HIIchromosome CDS2592294 630 - 0.593651
NA Pcar_2680 DNA mismatch repair proteinchromosome CDS3133070 2367 - 0.622307
NA Pcar_2613 putative DNA polymerase IIIchromosome CDS3065004 669 - 0.591928
NA Pcar_2643 conserved hypothetical proteinchromosome CDS3094989 1008 - 0.508929
NA Pcar_1548 holC; DNA polymerase III chi subunitchromosome CDS1813989 417 + 0.503597
NA Pcar_1513 integrase/recombinase XerDchromosome CDS1771571 888 + 0.545045
NA Pcar_1008 ComEA-related proteinchromosome CDS1180539 555 + 0.502703
NA Pcar_2931 transposon Tn7 transposition protein TnsBchromosome CDS3425956 2019 - 0.494304
NA Pcar_0497 hypothetical proteinchromosome CDS605857 531 + 0.572505
NA Pcar_1269 Mn2+-dependent serine/threonine protein kinasechromosome CDS1490453 759 + 0.552042
NA Pcar_3049 conserved hypothetical proteinchromosome CDS3561665 681 - 0.472834
NA Pcar_1762 hypothetical proteinchromosome CDS2059017 297 - 0.444444
NA Pcar_0764 primosomal protein n`chromosome CDS903988 2199 + 0.62392
NA Pcar_1791 conserved hypothetical proteinchromosome CDS2092550 972 - 0.510288
NA Pcar_1692 DNA polymerase III, delta prime subunitchromosome CDS1975608 966 + 0.541408
NA Pcar_1424 integration host factor, alpha subunitchromosome CDS1673330 282 + 0.43617
NA Pcar_3015 putative deoxyribonucleasechromosome CDS3528745 789 - 0.636248
NA Pcar_2194 putative transcriptional regulator, Fis familychromosome CDS2563255 990 + 0.492929
NA Pcar_0735 ATP-dependent RNA helicase RhlBchromosome CDS872856 1302 + 0.549155
NA Pcar_1780 conserved hypothetical proteinchromosome CDS2083873 360 + 0.441667
NA Pcar_1711 zinc resistance-associated proteinchromosome CDS1998329 522 + 0.494253
NA Pcar_2961 ATP-dependent DNA helicasechromosome CDS3470431 2037 + 0.572901
NA Pcar_2217 endonuclease, Holliday junction resolvase-likechromosome CDS2591926 372 - 0.596774
NA Pcar_2009 phage SPO1 DNA polymerase-related proteinchromosome CDS2340708 675 - 0.588148
NA Pcar_1347 transposase InsF for insertion sequence IS3A/B/C/D/E/fAchromosome CDS1576756 813 - 0.562116
NA Pcar_1335 Retron-type reverse transcriptase-likechromosome CDS1559958 1590 + 0.596855
NA Pcar_0793 conserved hypothetical proteinchromosome CDS936833 1941 + 0.459042
NA Pcar_2379 exodeoxyribonuclease IIIchromosome CDS2802191 831 - 0.56799
NA Pcar_2833 conserved hypothetical proteinchromosome CDS3312047 828 - 0.493961
NA Pcar_1695 deoxyribonuclease, TatD familychromosome CDS1979344 1395 + 0.551971
NA Pcar_1880 DNA-binding protein HUchromosome CDS2193948 285 - 0.515789
NA Pcar_1346 UV-endonuclease-likechromosome CDS1575711 921 - 0.514658
NA Pcar_1864 formamidopyrimidine DNA glycosylasechromosome CDS2178315 816 - 0.613971
NA Pcar_1708 UvrD/REP helicase family proteinchromosome CDS1991676 3357 - 0.600536
NA Pcar_2336 crossover junction endodeoxyribonuclease RuvCchromosome CDS2732117 486 + 0.590535
NA Pcar_0406 DNA topoisomerase Ichromosome CDS496745 2526 - 0.569675
NA Pcar_0529 transposase IS4 familychromosome CDS638770 1551 - 0.548034
NA Pcar_2433 Micrococcal nuclease (thermonuclease)-likechromosome CDS2863939 513 + 0.621832
NA Pcar_1740 Nucleotidyltransferase/DNA polymerase involved in DNA repair-likechromosome CDS2036404 1182 + 0.660744
NA Pcar_2405 RecA proteinchromosome CDS2830107 1026 + 0.587719
NA Pcar_1375 nuclease SbcCD, C subunit, putativechromosome CDS1611986 2445 + 0.597955
NA Pcar_0643 single-strand binding proteinchromosome CDS776848 474 - 0.575949
NA Pcar_0328 ATP-dependent RNA helicase DeaDchromosome CDS410936 1752 + 0.593037
NA Pcar_0004 DNA gyrase, B subunitchromosome CDS3964 2388 + 0.518425
NA Pcar_2360 mutator mutT proteinchromosome CDS2773895 453 + 0.547461
NA Pcar_2338 holliday junction DNA helicase RuvBchromosome CDS2733467 1026 + 0.552632
NA Pcar_2250 putative transcriptional regulator, Fis familychromosome CDS2627756 1002 + 0.500998
NA Pcar_1374 nuclease SbcCD, D subunit, putativechromosome CDS1610468 1266 + 0.582938
NA Pcar_1316 Retron-type reverse transcriptase-likechromosome CDS1538671 1590 + 0.593711
NA Pcar_2800 conserved hypothetical proteinchromosome CDS3266716 348 - 0.577586
NA Pcar_1351 hypothetical proteinchromosome CDS1579125 1011 - 0.534125
NA Pcar_2290 hypothetical proteinchromosome CDS2671886 381 - 0.548556
NA Pcar_2273 hypothetical proteinchromosome CDS2654453 504 - 0.468254
NA Pcar_0538 ISGsu4, transposasechromosome CDS651102 1050 + 0.58
NA Pcar_1378 putative transcriptional regulator, Fis familychromosome CDS1617258 978 - 0.497955
NA Pcar_0539 transposasechromosome CDS653000 882 - 0.572562
NA Pcar_0415 MutT/NUDIX family proteinchromosome CDS506818 870 + 0.6
NA Pcar_0002 DNA polymerase III, beta subunitchromosome CDS1680 1119 + 0.447721
NA Pcar_2864 5'-3' exonuclease (including N-terminal domain of PolI)-likechromosome CDS3349400 1443 + 0.609841
NA Pcar_1415 DNA polymerase III, delta subunit, putativechromosome CDS1662806 993 + 0.516616
NA Pcar_0986 ISGsu1, transposasechromosome CDS1157502 1131 + 0.498674
NA Pcar_1890 single-stranded-DNA-specific exonuclease RecJchromosome CDS2204039 1725 - 0.608696
NA Pcar_0577 transposasechromosome CDS700190 1251 - 0.538769
NA Pcar_0162 hypothetical proteinchromosome CDS203579 516 + 0.306202
NA Pcar_0740 DNA uptake protein and related DNA-binding proteins-likechromosome CDS879435 387 + 0.483204
NA Pcar_1352 hypothetical proteinchromosome CDS1580147 309 - 0.453074
NA Pcar_3052 transposase IS4 familychromosome CDS3563578 1551 - 0.551257
NA Pcar_0542 site-specific recombinase (XerD-like)chromosome CDS655765 993 + 0.494461
NA Pcar_0797 DNA polymerase I-3'-5' exonuclease and polymerase domains-likechromosome CDS943779 1782 - 0.521886
NA Pcar_2793 ATP-dependent DNA helicase PcrA, putativechromosome CDS3259030 2214 - 0.615176
NA Pcar_0023 ATP-dependent helicase DinGchromosome CDS24332 2556 + 0.614241
NA Pcar_1785 conserved hypothetical proteinchromosome CDS2087811 795 - 0.558491
NA Pcar_1822 conserved hypothetical proteinchromosome CDS2130868 1725 - 0.575652
NA Pcar_2714 hypothetical proteinchromosome CDS3169153 2352 + 0.572279
NA Pcar_0292 hypothetical proteinchromosome CDS366565 768 + 0.526042
NA Pcar_1455 integration host factor, beta subunitchromosome CDS1700355 279 - 0.480287
NA Pcar_0532 ISGsu4, transposasechromosome CDS642642 1050 + 0.569524
NA Pcar_0322 mutator MutT proteinchromosome CDS403616 1059 + 0.632672
NA Pcar_2269 prophage LambdaSa1, reverse transcriptase/maturase family proteinchromosome CDS2649707 1341 - 0.571961
NA Pcar_0536 hypothetical proteinchromosome CDS649487 1011 - 0.53907
NA Pcar_0553 excinuclease ABC, C subunitchromosome CDS674991 1839 + 0.591082
NA Pcar_0099 excinuclease ABC, B subunitchromosome CDS118811 2004 - 0.577345
NA Pcar_1385 ISGsu4, transposasechromosome CDS1625443 1050 - 0.58
NA Pcar_1103 conserved hypothetical proteinchromosome CDS1299067 2181 + 0.532783
NA Pcar_0792 transposasechromosome CDS934649 1203 - 0.615129
NA Pcar_0618 hypothetical proteinchromosome CDS746879 243 + 0.493827
NA Pcar_2264 conserved hypothetical proteinchromosome CDS2643544 972 - 0.515432
NA Pcar_0374 DNA polymerase III, gamma and tau subunitschromosome CDS461994 1749 + 0.575758
NA Pcar_1510 DNA mismatch repair protein MutSchromosome CDS1764418 2613 + 0.564868
NA Pcar_0419 DNA-cytosine methyltransferase family proteinchromosome CDS512729 1218 + 0.463054
NA Pcar_0537 hypothetical proteinchromosome CDS650509 309 - 0.449838
NA Pcar_0065 DNA repair protein RadCchromosome CDS81876 684 - 0.622807
NA Pcar_0009 endo III-related endonucleasechromosome CDS11641 651 + 0.563748
NA Pcar_0408 DNA processing protein DprAchromosome CDS499874 1101 - 0.613079
NA Pcar_2716 deoxyribodipyrimidine photolyasechromosome CDS3172345 1473 + 0.60353
NA Pcar_2213 DNA ligase, NAD-dependentchromosome CDS2586583 2016 + 0.593254
NA Pcar_1741 DNA polymerase III alpha subunitchromosome CDS2037706 3048 + 0.596129
NA Pcar_2270 hypothetical proteinchromosome CDS2651558 405 - 0.503704
NA Pcar_2328 ATPase, AAA familychromosome CDS2723577 1299 + 0.590454
NA Pcar_2179 putative transcriptional regulator, Fis familychromosome CDS2543656 978 - 0.49591
NA Pcar_1222 DNA polymerase III, alpha subunitchromosome CDS1430419 3471 + 0.551138
NA Pcar_0125 transposasechromosome CDS153877 1878 - 0.57082
NA Pcar_0805 Site-specific recombinase XerD-likechromosome CDS950238 1191 + 0.588581
NA Pcar_0592 DNA polymerase Ichromosome CDS717655 2676 + 0.578475
NA Pcar_0076 transposasechromosome CDS92090 1251 + 0.538769
NA Pcar_0597 DNA repair protein RecOchromosome CDS726408 777 + 0.586873
NA Pcar_1499 putative NUDIX domain conserved hypothetical proteinchromosome CDS1754086 513 + 0.510721
NA Pcar_1304 DNA mismatch repair protein MutLchromosome CDS1527024 1887 + 0.565448
NA Pcar_3071 endonuclease IVchromosome CDS3585801 849 - 0.603062
NA Pcar_2055 hypothetical proteinchromosome CDS2393990 549 - 0.384335
NA Pcar_1709 conserved hypothetical proteinchromosome CDS1995029 2691 - 0.582311
NA Pcar_1670 exodeoxyribonuclease VII, large subunitchromosome CDS1950002 1206 - 0.572968
NA Pcar_1348 transposon related ORF, HTH transcriptional regulatorchromosome CDS1577625 279 - 0.548387
NA Pcar_1382 hypothetical proteinchromosome CDS1621948 309 - 0.449838
NA Pcar_0917 putative transcriptional regulator, Fis familychromosome CDS1083282 984 - 0.494919
NA Pcar_1373 Retron-type reverse transcriptase-likechromosome CDS1608644 1590 + 0.596226
NA Pcar_1639 methyltransferase, putativechromosome CDS1915153 585 + 0.517949
NA Pcar_1381 hypothetical proteinchromosome CDS1620926 1011 - 0.53907