Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View as list

# Carboxydothermus hydrogenoformans Z-2901, Z-2901

>CHY_1344 putative FMN reductase
MKILGISFSARDKGNTDILVITALRGAASAGASTEFLKAKDLNIEYCRGC
LSCIYKGKCPIDDDLYKFIETVKSANGIVAGAPTYLFGPTGKVKTMIDRS
LTISPFLEEMDPEKRLGITISVAGNPLWNPMGSEILNQFLLSYGFGLYDF
LAGYAPGPGEVLLNDELLENAYRLGKELVLALRKEIEPPKAKENQCPYCK
SRLIKFEDSKIYCALCLAPAELHDGKLVFAENYEPFWTRNHRINHINDWI
IPSRDRFLTKIKDIKEKAKHFNL
>CHY_0995 flagellar protein
MPWSSKSKLLEGVAVRPDGEALKIPIKKIVILPEEVEKNNEESSALLNEA
KIKAQEIINAARREAEIIREEAKAKGYQQGYTEGQAKARQEFEKLQETLK
EEYEKKIAEKVLEINREREKIIKGVEQEIIAFIETSLEKLLGELPEAVTL
FYRKWLVDALAKFSQRMVPVIQVSPADREKIEEILQQQGLEEKIPVITDT
DLPAGTVVVKGEENYVISLKIFADEILEKLKAGAYGDE
>CHY_2675 putative DNA polymerase III, gamma/tau subunits
MYLALYRKWRPKTFSEIVGQETIVKILKNAVATMQVAHAYLFSGPRGTGK
TTTAKVLAKAVNCEHPVEGEPCNQCPSCIGINNQSLLNVFEIDAASNRGI
DEIRELRESIKLVPAQGKYKVYIIDEVHMLTNEAFNALLKTLEEPPEHVI
FILATTEFNKVPVTIVSRCQRFDFKRISTKTIWEHLKNIAEKEKLQYEAE
ALHLIAEASEGGLRDALSLMDQILVFNPKITVEDTLKVLGFVSWRKILEL
ISAIRENNQLKIINEIAEVVERGLDVKLFVQQILQYVRYLNLIKNGIEVE
ELMPEVLEKLRSEAALWEEDKLFLLWDDIARLEREVRYASFPRIWAEVGL
LKVARNLEGKLLKPATILKPVEDSKEESKKEKQKLNEEKSLGAINLLKTS
EWQEVLQKTREISPPLAIHLSKGIPFKTADSIKIVFTDEEPLNWIIHYKK
GSQVKAIIKEVFTEALGEGLKITFNVKKHSLEEKTDEPKALKKAKELFGD
DKVVIINKEEE
>CHY_1400 conserved domain protein
MELKDLLLMALKAERQNYLFLAEMTVKIKHPELRSLFSELQAETLRQIFL
LETLVEEKLSSPPVVKKLISLFRK
>CHY_2620 hydrolase, TatD family
MLIDSHAHLNDQKFKDDVEEVIKRARQNGVEKIITVGYDLPTSEEAVRLS
EKYPEIYAAVGIHPHDAKALNDQVFSRLEQLLDHPRVVALGEIGLDFYRD
LSPREVQREAFIRQLKLAREKGKPVIIHDRDAHQEVFDTLKEHALGLPGV
IHCFSGSAELALRYIKELNFYISLAGPLTFKNNVKGKEVAKKVPLEYLLV
ETDCPYLTPEPFRGRRNEPGLVTLVAEEIARIKGIAKEEAFQALTENTTK
LFNL
>CHY_1343 putative serine/threonine protein kinase
MGITIKEVSRISGVFGQQGEEKVAEVLKEHLPDGYKIINSYRLNYQGDSW
DIDHIVIGPNGIFVIETKNMRGRVFGGAMGNWWQEKWAGGQKEKIKIGNP
AAQVNHYAKLVKEFLRLYFPEEETRILVYPVVVFAHEEADFSKLRFTRPG
RIGKTKILSLYELPAFILSREEVSYDSDFIDKAINFLIPEDEREKTGMFK
TGLYYQNLQEQFSRRYRLEDLIGEGNFSKVYWAYDNKLDREVAVKEINLT
DLPGDIKDKIYNEAQLMAKINHENIVKLYDTFYFDDKIYLIIELVQGKTL
VEYLEEKGGMLSVKKAVNIMIQIAKALSYIHQHNIIHRDLKPENILISTD
DIVKITDFGIAQLNEEEKEEGFILGTPVVMAPEQILKTGIDQRTDIFALG
CIFYYLLTGHYPFSGTNFSELSYNILHFDPEPIRTYNSHCSLEIEKIILK
CLEKNPENRYQKVSELLQDLIKYQEQKNLGLFFNKKTFLKIALVVLGIAF
LYLFTLGTSMQNQGSAPISLNEILNKEQITLTNDNFNQVFANNYLAGAKV
KITGRILDIIGAQNGRTLCYFLLEPASLKDNKLTIALNLDPFSIFNGTKY
YQLEGFLAYSPLVENGAAKPVVIVERYKPLEPWHLFDPPIKTVEVKQTLK
RKDKEIIFEKIEFGKNETRLFITLRNLSNHPVNFNLLEPRASQKDRFYVE
ALYQNRDYPKLKDQLGPKEIVRGIIVLEKMDYQIKEAVFFLGLTMAGEEP
YIFHVRWGDENTGN
>CHY_0945 Ser/Thr protein phosphatase family protein
MRFLYITDTHFRGNSPQNRMDDFPQTLRKKMEEVVQVAQDLQVEAVLHGG
DLFEIPNPAVNVVGDVVRFLKALGKPFYIVPGNHDLFGQNPQTLNRTMLG
LLGQVGLLKILEPGEKVFFKKDGISLQLTGQGYHFDLDTERGREGYLVKN
KEADLAIHIVHGMLLDRPFFQTVAYTLIDDIKETEADLTLTGHAHLGFNE
IVVNNKKFINPGALVRTTVLPAEVNRWPQMVLIEAGKDGITTKFLPLKTA
LPGEQVLNIEKATEMKLREERLARIISEVRSSGDFRSLKLENILREIAQK
EQLPEEVREEALKRIAQAEIEMAREEVDDVP
>CHY_2167 putative transposase, truncation
MTLAKEMPVKAIARMVNEHDTRLWRILSYYVAKARQKEDYSNITKIGVDE
TSFKRGHDYVTIFADLERSKILFVTPGKDFETIEKFRNELLLHNGNPEKI
KEICIDMSPAFIKGARLFFPKANLTFDKFHVMKIINEAVDKVRRAEQKER
PELKGTKYLWLKSIRNLTKNQKEKLLSLKNRNIKTAKAYNIKLSFQELWQ
LSRVEAEQFWKKWYFWATHSRHEPIIEAAKIIKNHWNGVSNWFSSNLNNG
ILEGLNSVIQAVKRKARGYRSLNNFATIIYLVGGKLNLDF
>CHY_2201 ATPase, AAA family
MDLWDTAKNKVNKEAPLAYRMRPRSLDEFIGQEHILGEGKLLRRAILSDR
LGSLIFYGPPGTGKTTLARIIASTTKSGFESINAVTSGVGEIREVIKKAK
EREKYYGERTVLFIDEIHRFNKAQQDALLPEVEAGTIVLIGATTENPYFE
VNAPLLSRSRIFEFKPLEPEHIREIVRRALVDKERGLGEYKVEISEEALD
HLVTMAAGDARAALNGIELAVLTTPPDEDGVRKITVEIIEQSMQKKAIVY
DKEGDNHYDTISAFIKSLRGSDPDAAVYYLARMLEAGEDPRFIARRLIVH
AAEDVGLADPMALNVAVAAFHALEFVGMPEARLPLAEAAIYIACAPKSNA
VIKAIDRALAVVRKGENGPIPQHLRDAHYAGAKELGRGKGYKYPHDYPGH
FVLEEYLPENLKGQRFYEPSDSGQEAQIKQRLKELWGKVKNFTK
>CHY_0777 ISChy5, transposase
MKQIITIQARLYPKAEEKEVLDNLMRKWNSCKRYAYNRLLEGKTRKELKK
ELQSLFGLNSRYADDAILEANEILQSTKELGENPRKVIFGGKVLFYRLKS
KHLSSEQRQKYKKEWEDKRKGTLFSRGDKTKQGNLNLRVIEENGQFFLRV
NAGNRKWLFIELKSSHKKWRKFAKTMLNSCPYSVRLQRKNNKYYAYISFE
DNLPVASIDFSNGAIGIDLNAFPSHIAWAEIKKDGNLESFGEIPTPHLWD
GRKEKRDYFAWVYANEIVKLALEKNKGIVVEKLAIKDKGYRGDYKGRKSR
RVKHSFSYRKLIARIKTLAQRYGVAIREVSPAYTSVIGMLKYAPQFNLTK
DTAAAYVIARRGLALREKIPLKYRELLKSLQSKSRSVSSLTEGRNEGTAV
KGKTLPYKPWRVLRVALLTGALLGRPLYRDLSPLKRMLVSGMGEGG
>CHY_1686 prophage LambdaCh01, DNA replication protein
MDKAANLLMRERPSTLTNSFGKDHEYCPDCKDRGIIIIDNNTARICHCQE
QKRLERLFKSSQITPAFRAKTFENFVTDNRPPIIKAMFECARDYAQRFTE
IQKQENNWLVFLGEPGAGKTHLSMAVANWLLARGIPTLYFQHVEGLGELK
DLLRKQGEEGIAAKLEQMKKVELLIWDDLFWGKEQPREFELEITFEVLNY
RYLNLKPTIISSNRTPQQLLKIDNGTIGSRIVERGKGHMVVVQDHEANYR
LMGE
>CHY_1291 ISChy1, transposase
MARVVFAGIDVSALKCDLVCLDEQGQQLAPVKSFPNSLEGASAMVEVLDG
LAHKFNIQQLHIGLEATSIYSVHLRQFLLDSPKLKPYSTKVYEINPVMVA
SFKKAFGTKRPKTDALDAYVIAERVRFGHLTPCSRETIVTEPLCQLTRLR
LHLVEMVTAEQNRALNLLFLKFSNYHQDKPFSQTFGKASLAVLQEFTPDE
LIEMPLEELAEFIQSHGNNKLASPENMAKALKQAARRAYRLNPKMLAACE
VALSLTLQNIDHLKRQLKQLDKVICRELEAIPQTLTSVKGLGPISAAGII
AEIGDIKRFKDQAALAQYAGLTWTRYQSGDFDAEERRLTKSGNRYLRYYL
VQAANSLRVHNEEYKAYYQSKYHEVTKHQHKRALVLTARKLVRLVFALLS
KGQIYKGTVMK
>CHY_2642 ISChy3, transposase
MVRLPKELSYQQEIALKRFALIAPLLEPDLEAAEKRQRRKEILARSEISS
RTLRRYLQLYRQQGLSGLMPKIRSDNGSSRTISHEIIEEAVKLKEELPER
SVSQIIAILEGEKKVPAGMLARSTLGRHLSRLGLTQKEANQKISGHRRFA
KEQRNRLWQADIKYGPYLPHPKNPKRKVRTYLVAFIDDATRLLCHGEFYL
DQKRPVLEDCFRKAILKRGIPDAVYVDNGKIFVSRWFRLGCARLGIRPIN
TKPYSPESKGKIERFNRTVESFIAEIELQQPETLAELNQAFAVWVEEGYN
HHPHSSLENETPANRFQKDTRRLRFASLEECREAFLWEASRRVDKTGCIK
LEGRFYEIGLEWIRKTVDLRYDPFDLESIEFWYNGQKQGLAKPLVIQEYN
NLAAKNKKEQENKTPKTSRLLTVLEERSIERRRRKLGAIPFRQLEGGK
>CHY_2139 CRISPR-associated protein Cas6
MRIEVLLKPREKAVFLPFNYQYQITSAIYETIAKSSPEFARKLHDEGFGE
RRFKFFTFSQILAKRKKLAPDGFWIIGECSLKISSPLYEFLLHLLNGLFK
DHKFIIGREEFTVKGAFIRENPEIKPGQTFVCLSPIVVSTLKEGYTKPYY
IRYTEEPELFSEKIRQNLLRKFATYYGRLPVDDRLFFFFDEEYLQKNKGT
KLIHYRDQKILGYLAPFTVEGSAELIAFGYDVGFGEKNSMGFGCAEVK
>CHY_1109 ISChy1, transposase
MLRDVPAGHAPNLGQPKEGYPLARVVFAGIDVSALKCDLVCLDEQGQQLA
PVKSFPNSLEGASAMVEVLDGLAHKFNIQQLHIGLEATSIYSVHLRQFLL
DSPKLKPYSTKVYEINPVMVASFKKAFGTKRPKTDALDAYVIAERVRFGH
LTPCSRETIVTEPLRQLTRLRLHLVEMVTAEQNRALNLLFLKFSNYHQDK
PFSQTFGKASLAVLQEFTPDELIEMPLEELAEFIQSHGNNKLASPENMAK
ALKQAARRAYRLNPKMLAACEVALSLTLQNIDHLKRQLKQLDKVICRELE
AIPQTLTSVKGLGPISAAGIIAEIGDIKRFKDQAALAQYAGLTWTRYQSG
DFDAEERRLTKSGNRYLRYYLVQAANSLRVHNEEYKAYYQSKYHEVTKHQ
HKRALVLTARKLVRLVFALLSKGQIYKGTVMK
>CHY_1672 putative prophage LambdaCh01, scaffold protein
MNDDALNKTNSNPADAGQDNQNNKQAETKTFTQEELERIIAERLKREREK
FKDYAELKKAAEELQKLKEAQMTEQEKLQAKLQEYERILQEKERETKEAQ
IQATKVKVLTELGLPLDLAGRIFGEDEESIRQDAEALKKLLGIASKPIGG
GTNPTTTNSGIQNPWRKETFNLTLQGKILKENPALAQKLMAEAGVK
>CHY_2242 ISChy5, transposase
MKAVKQVITIQARLFPRAEEKEVVDNLMRKWNSCKRYAYNRLLEGKARKE
LKKELQSLFGLNSRYADDAILEANEILQSIRELGENPRKVIFGGKVLFYR
LKSKHLSSKQRQKYKKEWEDKRKGTLFSRGDKTKQGNLNLRVIEEKGQFF
LRINTGNRKWLFIQLKSSHKKWRKFAEAMLNSCPYSVRLQRKNNKYYAYI
SFEEDLPDVSIDFSHGAIGIDLNAFPSHIAWAEIKKDGNLESLGEIPTPH
LWDGRKEKRDYFAWVYANEIVKLALKKNKGIVMEKLAIKDKGYRGDYKGR
KSRRVKHGFSYRKLIARIKILAKRYGVAIREVSPAYTSVIGMLKYAPQFN
LTKDTAAAYVIARRGLALREKIPLKYRELLKSLQSESRSVSTLTEGRNEG
TAVKGKTLPYKPWRVLRVALLTGALLDRPLYRDLSPLKRMLVSGMGEGG
>CHY_1681 prophage LambdaCh01, terminase, small subunit
MAKLTEKQKRFIDYYIETGNAAEAARRAGYKGKNLDVIGSQNLVKLRIYI
EEKMKQKDNERIASQDEVLEFLTRVMRGLETEEVVVTENKGDYISEAKII
KKQVSAKDRVKAAELLGKRYALFTEKVNVSGNMGVVIVDDIEDDNNDGEN
>CHY_1205 ISChy5, transposase
MKQVITIQARLFPKAEENVVLDNIMRKWNSCKRYAYNRLLEGKTRKELKK
ELQSLFGLNSRYVDDAILEASEVLQSIRELGENPRKVIFGGKVLFYRLKS
KHLSSEQRQKYKKEWEDKRKGTLFSRGDKTKQGNLNLRVIEENGQFFLRV
NAGNRKWLFIELKSSHKKWRKFAEAMLNSCPYSVRLQRKNNKYYAYISFE
DDLPNTAIDFSNGAIGIDLNAFPSHIAWAEIKKDGNLESFGEIPTPHLWD
GRKEKRDYFAWVYANEIVKLALEKNKGIVVEKLAIKDKGYRGDYKGRKSR
RVKHGFSYRKLIARVKILAQRYGVAIREVSPAYTSLIGMLKYAPQFNLTK
DTAAAYVIARRGLALREKIPLKYRELLKSLQSKSRSVSSATDGRNGGTAV
KGKTLPYKPWRVLRVALLTGALLDRPLYRDLSPLKRILISGMGEGG
>CHY_2165 putative thermonuclease
MSVASKTKHHDGLVAIFVILSLLGILWVAKDVAKIEEKMLKRTRPAIITD
VQGEVITIKISGMKFKVVLFGIKLSTQTTKNQQDIKKYLRENWLKKPVWV
EFEYTSDGHILKNQKGYPLVYIWDIQPTSGKPREAKEHMLNVKLLLNGYA
QYLSYGKNQNLSPYTKLFLEMQDVARKNKIGIWQW
>CHY_1317 hypothetical protein
MLFVFSLNIQLSPSISFLTLGYGNYNVGSKHLPFLCAISKLRKQIEKEKN
AVEMIRDPVALDYWLAKQSKFLAIDGIEVVALSLNNPLIKEPGGGVIGSP
FKKLQPARGEIEFLKSDIGILTFPEGPGVALIGIDKSDFENFRKELGKLK
EVKYNFCRILDLIEKTKVKTALFISDGCGLVETGGGFYIRKFNIRKFFFL
PWGRVSGEYELELYVWQC
>CHY_2640 DNA primase, internal deletion
MNEDALPHGNCFRCGFTGDIWGLLKECADLFVDNIETVWEILEENSQERD
LETQKIMGKTVLRGFVNEKNVEKILSEAKGKCMYMEKLGFNAQEMEECDI
YYRDGSESADCNESNDFRYRVIYAIRDINEKVVGLQGRSIFDDEQEREHK
VLGDNFWKKQYWENSEITEEQKNNKKKKLTSRIINTVGFKRDENLYLLYK
YVKNPNEYKKVVIVEGPKDAARVYCYRLDDVAVVATLGNSISERQMELLM
EVFGKDIEMILAYDNTDDGIKANIATYEKMKKFGFSRVKILVYPKKNKKD
RYKDFGEMVAPRDSAFYQIVRRKIQHAIDEAVDIETYRKKFGLASDTLET
QKTQEKSFRDEVNAYFLSRVTGKIKKEKEMEAEKKKESIQADKSKIDKEK
LVHEIMEDFYITETEARSLVYREAV
>CHY_0025 conserved hypothetical protein
MDLSKIITNPDKLFYPADLIFKKDVIAYYYLMADHILPYISNRPFVMNRF
PDGIAGKSFYQKEIPAYAPNFLNKVAIWHEKEKKWVNYPYVAHKEALLWL
VNQGVIELHCWLSEVPQIENPDILVFDLDPEPPLSFQDCLPVALLLREVL
LKLGLEAWPKTSGKEGMHLFVPIEPKYGFKDTTRAAFNLCRLILKAYPEK
VTLERVIKKRTGKVYLDYLQNSRGRTMVFPYSLRPLPKAPVSTPLLWEEV
TKGEISPAEFNIKTIWERVKKYGDLWSNFHRRRYDIKPLLELM
>CHY_1795 putative DNA proccessing protein DprA
MQNSDYYLTLASVYYNQKLFHLIKEGIPVEEIVVNPVKTLKEFGFSPTEI
NSLTRKISEFNPERVKEHCSNLGIKIVTFGEKRYPERLLHLYDPPVVLFC
WGNLELLKTPMVGIVGARRASSYGLKVARAFAEEIAGAGITVISGLARGI
DGEAHRGAVSAGATVAVLGSGIDVPYPRENENLYREIIQKGLIISEFLPG
TMPLPYLFPIRNRLIAALAEGIVVVEAALKSGSLITARIALELGREVFAV
PGMITSPLSAGSNLLLKDGARIALKGTEVIEELGFGTLFSNSFAAQRSKQ
EAFGLAGKILEVLVNEDLTVEEIAYRLNARVSEVLREISFLEIKGFVKKQ
FGGKFTRG
>CHY_0774 ISChy1, transposase
MARVVFAGIDVSALKCDLVCLDEQGQQLAPVKSFPNSLEGASAMVEVLDG
LAHKFNIQQLHIGLEATSIYSVHLRQFLLDSPKLKPYSTKVYEINPVMVA
SFKKAFGTKRPKTDALDAYVIAERVRFGHLTPCSRETIVTEPLRQLTRLR
LHLVEMVTAEQNRALNLLFLKFSNYHQDKPFSQTFGKASLAVLQEFTPDE
LIEMPLEELAEFIQSHGNNKLASPENMAKALKQAARRAYRLNPKMLAACE
VALSLTLQNIDHLKRQLKQLDKVICRELEAIPQTLTSVKGLGPISAAGII
AEIGDIKRFKDQAALAQYAGLTWTRYQSGDFDAEERRLTKSGNRYLRYYL
VQAANSLRVHNEEYKAYYQSKYHEVTKHQHKRALVLTARKLVRLVFALLS
KGQIYKGTVMK
>CHY_1251 ISChy3, transposase
MVRLPKELSYQQEIALKRFALIAPLLEPDLEAAEKRQRRKEILARSEISS
RTLRRYLQLYRQQGLSGLMPKIRSDNGSSRTISHEIIEEAVKLKEELPER
SVSQIIAILEGEKKVPAGMLARSTLGRHLSRLGLTQKEANQKISGHRRFA
KEQRNRLWQADIKYGPYLPHPKNPKRKVRTYLVAFIDDATRLLCHGEFYL
DQKRPVLEDCFRKAILKRGIPDAVYVDNGKIFVSRWFRLGCARLGIRPIN
TKPYSPESKGKIERFNRTVESFIAEIELQQPETLAELNQAFAVWVEEGYN
HHPHSSLENETPANRFQKDTRRLRFASLEECREAFLWEASRRVDKTGCIK
LEGRFYEIGLEWIRKTVDLRYDPFDLESIEFWYNGQKQGLAKPLVIQEYN
NLAAKNKKEQENKTPKTSRLLTVLEERSIERRRRKLGAIPFRQLEGGK
>CHY_1460 putative methyltransferase
MRIITGDARGRKLIAPKGLKTRPTSDRVKEAMFNILGYRVIDAVVLDGFA
GTGNLGLEALSRGAKFSYFIEADREAFSCLRRNIENLGYGDRAKAILGDI
FKILPHINEKFDLIFLDPPYGYGFEERAVLTILQLGLLKETGLIVVETAK
KIGLNISSEKLGLIREAVYGNTLLGFYQLKRGGE
>CHY_0843 site-specific recombinase, phage integrase family
MPKSNVLRLPLSLKITWQDLLDEFILVKEAEGRSARTIHDYRFHIERFFN
RFPHALESYTSLRQSVLKYFTEKASPSTRNKRLAHLKAFFSWCAKEGYIP
ANPAEGIKRAKEDITNIRHVSLEEVKKLLQQPDKKTYTGLRDYCLMLVQI
DTGVRPGELLQVRGSDLSLESREIRIRPEVAKTRIGRTLIITPFTAQQIA
RFLRIRPEHWGDDVPLFASENGITLNENDWAKRVRQYCKKAGVKVTPYGL
RHTFAIEFLKAGGDPFSLQRILGHTDLTMTRRYVRLSQDDIKEVHEKASP
VQKLQQMGKRAPRKLSGGGK
>CHY_0598 ISChy9, transposase orfA
MWYNNFMKRKFKSNNNIMYSCKYHVVWCPKYRRPVLKDGVDVRLKEILFE
VAREKRAEIIELEVMPDHVHLLVEVDPQFGIHRLVKLMKGRSSRILRQEF
PWLRSRLPTLWTNSYFVATVGGAPRATLREYIEKQKYV
>CHY_0946 conserved hypothetical protein
MYLEKLILVNFQSHKYSEFNFAPGLNVIVGESDRGKTAVIRALRWLFYNE
PKGSEFIRVGEREARVTAHFSNGLIVSRERSDRKNRYVLIKPGEAPVVFE
KFGQEVPPEISEVLGVQKIRLDKDWEVALNLSTQLEPPFLLFESATRKAK
AIGQFQGVHLLDYAAKNVSRDIRNIDEEIRYKNTEIAALKEKLEEFADLP
HLSARLNNLKTRKFIAQSVIERLNNLTALRENLEQVRQKIQENRDIVKKF
GVVSVEKFWKIEALYKRYQELLKLKESYTGILQKKREALEILNHTTALPR
AKEYLEEAMDTYFKLKTLQQLAEKRQKISEQKRKLLYIISILTPVEVTAR
KYQEILPDCKKQQELLGKYQELQKLGRHKTYYAGIIYKYRKIPELAQTLK
NLEEKLKRYEQLTVLFHNLSGIHRRKKEQERELERIKQEVVSLQDQYREA
LLQAGRCPTCNTPLDEITVQKIIFGEVVR
>CHY_0811 ISChy8, transposase
MKRTNVVRVLPDKLQKQVLETIGDRCAALWNAVQYRCRQAFFKGESVPSY
AALCSEFKEHPAYKALPAHMGQEIIKKARKAWDSYFACLRLYRKGELEKP
PHIPRYWKDRRTGKRIFRVIPVKAPTSYSLDARYLSLTLPQDLRKGRGDR
LVLRTKGVLRFHGRPKTLELKYDPVKIRWYAHQVVEVPEPARKARPEKHA
AIDLGVRVLVALAVEGLNRQFLFSAREVIKDFLYWTNQIAGEQSRLNRAG
RKTSRRLKRLYQLRARRLRHAFVALAAKIVRILKRLRVTTLFLEDLRGIR
ETMDFGPKNLLVHNFWAFRMLRNLIEAACTRTGIRVVPMEPRGTSSRCAV
CGSSVRRPVRHKAVCEKCGRVWHADANAALNIILQGSSKEHGAEATPLKP
LAFRWNRHRWVSRFESAAGTPSGATSGSRMAA
>CHY_1235 DNA replication protein DnaD
MSGLTLFLAELFNQGLLSVPVFLLKNYRHLNLTEKELVFLLQLMSFNNEG
NLLPSAEFLAKSLGEDLGEIKKNYRELIKKGIISVSKKFDEKSGKYVETI
DYTPLFEKLTDLWAAQKVLNEVNNRPLEKGSVDSAARVVEVFSREFGRGL
SPIEIELIDNWLNQKKYSEELIYEALKRAVILNKKSFRYIDAILYRWESN
NIKTIEEVNNFEEQMKKKKTAKASKNENNDMDEKKKELIKKLYLS
>CHY_2212 putative DNA methylase
MAKKMNCKYCGEKINKTEYPVHLELLHPEVYQNLVVAIKRDYEKGNSIKE
IANNYFVTQKFIKEVVKHSQSLLKEEEKNYTPVNNKPRTWAPENFSLETT
TVWSFPDRGSWATHSGKYRGNWSPFIPRNIILRYSKEGEVVLDQFVGSGT
TLVEAKLLKRKGIGVDINPEAVSLTLKNTNFEIEEGGEIEVRVGDARNLY
FLKDESIDLICTHPPYSNIIKYSDNIEGDLSHFDVNDFLLEMEKVAKECY
RVLKKGKFCAILIGDTRRKGYIIPIGFSVMEIFRKIGFKLKEIIIKEQHN
CSSTGYWRNQSIKYNFLLIAHEYLFVFKK
>CHY_1797 conserved hypothetical protein
MVRDLVYPEGIYLDEIIAYYSKTWEYLRPYMQGRPFFVKFYPEGVGRESY
YVRGKLAHAPAALVYYEKRINEKTSLLVEDFPTLKWLIEQGCIEMHGLLA
KAGQERFPDLLLFDLDPFPPSGFQECVEVALLIREVLNSYGLEGYPKTSG
LMGLHILVPVVPRYKNETLVSIAKFIGSLVEKAHPQRVSLQDYRAEREGK
VHLDYSHNRYGKTIILPYSIRAFAGAGVSTPLTWEEIKSGKINPLDFNIK
TIPHRLKKDGEVWDLFSRQYSLEDLLKLL
>CHY_0036 single-strand binding protein
MFNKVILIGRLTRDPELRHTPQGTPVASITVAVDRPFTTKEGQRETDFID
VVVWQKLAETVARVLTKGRLVMVEGRLQIRSYTDKEGQKRRVYEVVGENV
RFLDKPKNAGLAPGNLPDEFPAVDFDPSDFGTEIEISDEDIPF
>CHY_0551 conserved hypothetical protein
MPRYDFRCEDCGEKFTAWASINDRDKVVCPKCESNRVKQLLTGFGIIGGS
QSSSSLSSAGSSGCTSFG
>CHY_0292 site-specific recombinase, resolvase family
MRAVIYVRFSIDNQCEEYITTQVRACSEYAKQKGYHIVKIYADETRSALT
DDRPNFLGMDSDAKLGLFGIVLIHKLDRFARNRNDSAIYKRKFRRCGVQH
YFFLKKQKRATG
>CHY_1116 ISChy4, transposition helper protein
MIDLEKARSHLEELGLLSAAAFLDALLERAQRENRTYLDFLNDLLETELA
ERQRRNVEVRSKLARLPYKKTLKEFDFTFQPSIDEKLIRELATMAFVHRA
ENVIFLGPPGVGKTHLAVALAIEALSQGISVYFTSLSRLIEDLKTAHKES
RLERRMRIYLRPKLLIIDEVGYLPLDGLGSNLFFQLISARYEKGSIILTS
NKSFGEWGELMGDPVLATAVLDRLLHHAHIINIRGNSYRLKDRLKTGLYG
NPHVKA
>CHY_0542 conserved hypothetical protein TIGR00250
MKVLGLDVGDKKIGVALSDELGLTAQGLTVIYRTSLKKDLEEIKKIIDLH
HVTEVVIGYPRNMNGTAGPRAELVKRFARELYKFTGIKPVFWDERLSTVE
AEKLLISGDISRRKRKKVIDKLAATLILSGYLNYKSKN
>CHY_0229 ATP-dependent RNA helicase, DEAD box family
MEEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGT
GKTAAYLLPVLQRIQRGKKAQVLIVTPTRELALQVADEVAKLGKYLKVRA
LAVYGGQAIERQIRGLRQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILD
EADEMLDMGFIDDIEAILNTLTNRQQTLLFSATLPAPIKTIIKKFLGGYK
TVKLVGREKTVPAIRQVYYELPETEKIEGLVSILNSELPIQAIVFCRTKK
RVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAA
RGLDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKL
LKAIEEAINKRLKREILPEPVDLEEARFKKIAKKILDTITKGVPALYLEM
AARLLEEEESEQLLGATLYLLEDRSLQNDF
>CHY_2654 conserved hypothetical protein
MRIRDMFYKKIDRDIKGVIKIGQEDEENAYQELEEYVVTRELKKYFSEFF
EAYKKGIIGYTDKMGVWISGFFGSGKSHFLKILSYLLENRVVKGKKAVEY
FRDKIDDPMVLADIEMAGNISADVILFNIESKADADSKTQKDAIVKVFNR
VFNDMQGFCGSIPWLADLERQMSKDGTYEDFKKEFERISGRKWEEAREDF
YYEEDAIVKALASATKMSEQAARNWYNKAEENYTLTVDKFAKRVREYIES
KGGNHHVVFCVDEIGQYIGDNSGLMLNLQTLVEDLGTECGGKAWVIVTSQ
EDIDSITRVKGNDFSKIQGRFNTRISLSSANVDEVIKKRLLKKTQVATDT
LKLLYENKSSILKNLITFSADTPEKKFYTDSNDFAEVYPFIPYQFNLLQQ
VFTSIRIHGASGKHLSEGERSMISSFQEAAIRYADCEEGTLIPFSAFYDT
IETFLDSNIRTVIIHAQENSNLNDFDVELLKVLFMIKYLTKEIPPNIENL
ATLMVSHIDEDKIALKKKIEESLKRLIKENLVQKDGDWYIFLTHEEQDIN
REIKNIQIDTAEIIQKVSEIIFEDIYPDKKFKYSTRYHFPFNQIVDDRFF
RGNQGSEIGVKIITPYYDSGSEMTQLEFKEMSQRENNLIVKLPPDTTFLE
EMEEVLKIEAYLRKNGGIASTPTMEEIKNRKRNEASKRKERVKSLIIDAL
KAAELYVNAQKLDIREKDPVERINEGLRVLIDSLYTKLGYIKAFIDSPSD
INNILTQEAVQMSLAEDPNKLALEEVSSYIERNTARNIPVTMRTVINVFQ
KAPYGWNEEDIEGLIAKLFKAQEVKLQLNGEYLDINDRDLVKYLTKRDYA
EKLLIEKRIKISPVLINTAKEIVKEVFGRTALPNDEDGLMRKIKEYMQDE
CNHIDQLLQNYKYAKYPGKDVLEEGKKLFTALLKIRDAKEFFEEIQNKKE
ELLDYGDYAHDVKKFFDPEGKQKEIFDKGMRMVELYEKNKTYVLDKAAIE
LYEQIARIINSKEPYSEIYRLPDLIDKFTKRFAELLEEEAKPIKQVVESD
KKKVLDELSSYDFKDKYYEKFRKGFDDLLYRLDHANNFYEVIAMKEESDR
LKQRYFEEIANEVEKQKYSHGGASIVAETPEGVIKPPKQKKIVNISLSHL
LHGIRNIESKEDIEKLLDEIRAKLESELDENTIIKIV
>CHY_0099 putative methylase
MASFRSTGFSRGDSGLILTATGGGFVKLSLIATAAFGLESVVALELKNLG
INDVMVENGKVQFFGDYSTIARTNLWLRTADRVLIKVGEFYAESFEELFE
KTKALPWEEFLPKNANFPVTGKAVRSKLMSVSDCQAIVKKAIVERLKGKY
RLNWFPEDGPEFKIEVSLLKDLATLTIDTSGAGLHKRGYRKLTGRAPLRE
TLAAALVILSRWREDRAFSDPFCGSGTIPVEAALIGLNIAPGINREFAFM
KWPWFPKKELERAREEARSKRRNLKLLIYGSDISEDELSYARYHAKAAGV
EKSIRFFKKDFREVKFTEEYGWLISNLPYGERIGDVREVEKLYRELKILR
EKLPTWSFYFLTSHPAFEKLYGRKADKRRKLYNGKIETQFYQFFGPKPPK
IIL
>CHY_2508 ISChy2, transposase
MNKIEKLLLVHGSDIIFVGIDVAKKNHYARIINHIGLEPVKPFKFNNSKD
GYFRIVSKILEAKEKTKAERVIIGLEPSGHYWKPLTWFLKQQGYRVVLVN
PFHVKKRKEEEDNSPTKNDRKDALIIAKLVKEGKFLNCLLPEGIYADLRN
LSVARKQLISKLNSAKNKLVSIIDEYFPEFEEVFKNLLGKAALWVLRHCP
FPSMILNYTKEELAENLKRAANKRVGIKRAEKLIEAAQKSVGVKEGLKGA
YIRLHSYLDEIEFLKGQLETIEKTMEELLKKIDIAEYLLSIPGIGVITVA
GFLADVGDLANYTHFKQIQKLAGLNIAENQSGKHKGKAKISKRGRPELRN
LLYKASLTLVAKNKEFKALYNYFLKRPKNPLKAKQALIAISVKLVRVMFA
LAKKRENYDPQKVLGEYRIMQINQLAA
>CHY_0948 conserved hypothetical protein
MREKLLQLEEALNQLEQYYLIRKGQKEQIEKELLEKEEKLKELTAERDKL
EKTRYLLLVAGQYAREQAKKYLEDIATSTLQYVFGPEISLEIELSERAGA
NTAEFFVVSDYGSLKVKNRPEDARGGGVVDILSLALRIFLLNAVEPKIKG
PLLLDEPGKHVSEEFVGSLALFLKETSRHFNRQVIMVTHNQNLAGIADKA
FLVELKEGVSEVRELNL
>CHY_0179 uracil-DNA glycosylase, family 4
MEELKALKEEALACQRCNLRAHAQRVVFGEGNEKALLMLVGEGPGAEEDR
QGRPFVGAAGELLNKILEAAGISREEVYIGNVVKCRPPNNRVPTREEVAA
CRTFLDRQIELIKPKIIVCLGATAAQTLIGPDVRITKIRGLWHEKGEIKI
MPTFHPAALLRDPTKKRPAWEDFQKVRDLYFALKKEQEVEEFEQLKLF
>CHY_2211 type II restriction endonuclease
MLYLNLQKDELADLFVRSLLETNRAFNFYVNWKNVEEYKKFDIELNAMNV
LIRNEDFDNTFKRLLKKMPTVVATFPYLFALSKAEREKTWNGTEKLLIIN
DKIGESDILEYDFSLKTLKKGLSDEQIENYLYFFEKMGLKHLFLNLAQNN
IIDYVIGVLVGLDSNGRKNRGGHAFELACYPIIRDLCDKYEIILIEQKQF
KVLKEEYGFEISDNISERKADFILLKDKKCLNIEVNFFGGAGSKPEEIID
SYINRQRDLKENNIDFAFITDGKKCWGNSTKPQLQKAFREIKYFMNFFLA
KEGMLEEVIKEIFKL
>CHY_0051 putative DNA polymerase III, delta prime subunit
MDNLIIEALNQDKLSHAYLLTSPVLEAVVDFARRTAREILIKSANDPVEA
ANLFEAGTHPDFLWLAPDGSSFKIWQVNEVLIPKVYLTPQKGSRKVIVLE
EVDKMTLDAANAFLKTLEEPPAGVTYLLIATMPEKVLPTIHSRCQKVKVS
AEDFTGQYKGYAEKFYELLTLPWEEFYKKTEKITREELNNLLLAGELILR
DALIVDKGSEKLFYPDLFDKARELNRLGEEEIYRLLNRLEDFLAKTRLNL
NPRLVLENLYLNFSFYK
>CHY_1567 DNA-3-methyladenine glycosylase
MLLPRQFYARDVLIVAKDLLNCYLVREYNGHLLIGKIVETEAYHQNDPAC
HAYRGKTKRNEVMFGPPGHAYVYFTYGMHYCFNVVTGAIGRAEAVLIRAL
EPVKGIDIIKTLRGGKSERELLSGPAKLTQGLAIDLKLNGHDLTGGKILY
ITKGEPVAEEDIVVTTRIGINAGKDLPYRFYLKNNKYVSKK
>CHY_1021 conserved hypothetical protein
MVNWELKLTNNNLEAYVKYSLLEGEKGGEVPVTEQDLKEFLSQKGIVYGI
IEENIPEVLANPDQFMLIARGKEPLPPVPDEIITYFTAEEEKYSVDKLGH
RIYYFKSLPQVNEGQLLAEVKRGKPGEDGIDVFGKPVKAKGYIPVKLKAQ
KGAEIKDDKVYATVKGLPVRIGHTGFGVQNLLTLDRDLTYKTGNYQFVGS
IKVNGNVLENVLLKAEGSVEVFGNVDSAKIYAGESFIGRKNVINSEITVG
LKPMLAAKIVRILNEFRESFHPLLILIQELLPNLNEKPVTLFRVLQQLYK
KPEELNKLLEKIKKTFQGISENKPELEAFWRAGLDRLIEVERVFAAFLRS
FSETFPASVLNQKINLWWHLIEMGVKYFQEEQQNAHANPFQLTVYSGQNS
KFNVFGDFILNGKSLYHCTVTATGSIFAEGGTVVVGGKLQAGKMVDLDEV
GTPMGTTMEIVVGKESTVKIKKVNPGVLLKIGRFQKTFRETEYGVLFAGE
KDL
>CHY_1750 ISChy1, transposase
MARVVFAGIDVSALKCDLVCLDEQGQQLAPVKSFPNSLEGASAMVEVLDG
LAHKFNIQQLHIGLEATSIYSVHLRQFLLDSPKLKPYSTKVYEINPVMVA
SFKKAFGTKRPKTDALDAYVIAERVRFGHLTPCSRETIVTEPLRQLTRLR
LHLVEMVTAEQNRALNLLFLKFSNYHQDKPFSQTFGKASLAVLQEFTPDE
LIEMPLEELAEFIQSHGNNKLASPENMAKALKQAARRAYRLNPKMLAACE
VALSLTLQNIDHLKRQLKQLDKVICRELEAIPQTLTSVKGLGPISAAGII
AEIGDIKRFKDQAALAQYAGLTWTRYQSGDFDAEERRLTKSGNRYLRYYL
VQAANSLRVHNEEYKAYYQSKYHEVTKHQHKRALVLTARKLVRLVFALLS
KGQIYKGTVMK
>CHY_1695 hypothetical protein
MGKKYIDIWELKKGDKVMDPDGMVWEVREIVRREYAGFFLRATGWDDNDK
FRMVQGYRDKTKVCIVA
>CHY_0438 putative DNA repair protein RecO
MKFYLDEGIVLKGSDFGDGHRMLTIITKELGKIKAVAYGAKKVKSKKRGA
LLEFSRTNIYLRQSNDYFIVEQAEGIEYFPNLYGNKDLLHAAGQIAWLTD
RFWPLGQLNPKLYNWVLYSLRLLNSGVWPKIVLRNFELKLLAFTGFRPIT
THCAVCRKPYRGEVWYFGAGEGGIVCPSCRPIEGIYFEIFPEVVKGMNAL
LLASPEKLPELLLDERVVDRVKTILEYFLGYQLGEPIRLL
>CHY_2646 hypothetical protein
MRKQKQFWTVVSERTFQRLRELSEETGMTITKVMLWILFEQFDYSTEIRN
DYTFTTAKGHKIVAKVTDEELEKLQDLAQKHLMSVSRLVRNILYTYFFKK
SE
>CHY_2507 ISChy4, transposase
MLHELQARGKSIRAIARETGHSRNTVRKYLRAEGIPERKPHPKRGSKLDP
YKDTIQELMNLGIFNCEVIYERIKEEGYTGGRTILRDYVRQFRPPKQVPA
VCRYETKPGQQAQVDWGEYTYIDEETGEIRKLYVFVMVLGYSRAIYVEFT
NRCDVHTFIRCLIHGFEYFGGVTDIVLTDRMKTVILGTGENKKPIWNPTF
EDLAATLGFIPKVCRARRPQTKGKVESGIDFVKNNFLPGRKFVDYGDLNR
QAIVWCEKKNRRIHGTTGERPIDRLKKENLKPLPALDKYQKFLEEARKVH
KDGFLSFDGVRYGVPWQYSGKEVVVRDKNGKIEILYDGKVIATHEKHYRS
RSTVFLKDQYKGLKEAEGMFYPRPRAIKLSSLEVEKRPLGVYESLLEVGT
V
>CHY_0909 ISChy5, transposase
MKQVITIQARLFPKAEEKEVLDNLMRKWNSCKRYAYNRLLEGKARKELKK
ELQSLFGLNSRYVDDAIFEANEILQSIRELGENPRKVIFGGKVLFYRLKR
KHLSSKQRQKYKKEWEDKRKGTLFSRGDRSKQGNLNLRVIEENGQFFLRV
NAGNRKWLFIELKSSHKKWRKFAKTMLNFCPYSVRLQRKNNKYYAYISFE
DDLPNTAIDFSNGAIGIDLNAFPSHIAWAEIKKDGTLKSFGEIPTPHLWD
GRKEKRDYFAWVYANEIVKLALEKNKGIVVEKLAIKDKGYRGDYKGRKSR
RVKHGFSYRKLIARIKTLAQRYGVAIREVSPAYTSVIGMLKYAPQFNLTK
DTAAAYVIARRGLALREKIPLKYRELLKSLQSKSRSVSSLTEGRNEGTAV
KGKTLPYKPWRVLRVALLTGALLDRPLYRDLSPLKRMLVSGMGEGG
>CHY_1698 prophage LambdaCh01, nuclease domain protein
MSFKMDQPEKFPWFRKIPGFRSGKPLNMIIASIFYLTYLVMAISIIRESS
NNFWETVAIFSLVFLLPISLIASIFLAFKRDPLWKKWLAGAGIAFLVFFV
SVINSPTSQAPNNNASKPTSKQEVVATSQQNQSTTDSISSEKTPTIAPQS
QNSQTNENTQQSSQDQQAPIPLIAAKVTKVVDGDTIYVRLPNGSEEKVRF
IGVDTPESTIQHEPYGNEASNYTKSKLAGKTVYLEKDVSERDKYGRLLRY
IWLAKPKEISESEIRSKMFNAILLLGGYAQVATYPPDVKYVDYFVKFQQE
AREAEKGLWGISPTQEEDISLAIQYVGNKNSRKFHYEDCRWAKKIAPSNR
VYFKSREAAINAGYVPCKVCNP
>CHY_2664 site-specific recombinase, phage integrase family
MPKPIPFKKSLEVNLSQLKEEFLIARQADGLAPRTLEDYRWHIEKFMELT
GANPTYEAVRKAILQHLSEPSSPRYRNIKLQYLKAFFNWCVREGYLPANP
TDGIRKAKEDISNVRHVSIEAVKKLLAQPDKKTYAGLRDYCLMLVQIDTG
ARPSELLQIKPDDLNLDAREIYVRADVAKTRIGRTLVISPFTVQALMRFL
KIRPSWWSNEVPLFASENGRQLTAQRWSRIVKRYCEEAGVKVTPYGLRHT
FAIEFLKGGGDPFSLQRILGHTDLTMTRRYVRLSQDDIKEIHEKASPIQK
LQYDARRAPRRI
>CHY_0203 conserved domain protein
MPRQKRFFLPGSIYHIIARGNKKEKIFLEEKDYNFFLFLLQKNWEKKPLK
IFAFTLMSNHFHILAQATDEPLSKYFQPVLTTYAIYFNRKYQKTGHVFED
RFKSYLIESDDYLWEAFRYVLLNPLRAGLVLSLSSYPWSSFYYFLNPQKA
LPFMDFSLFTQICPNGLEDLQPITNFLVESLVKEEFWPEDLDGSIRYFHL
QYLAKKICSELNLSYTELLTDEYKRPVVNAQVELALRAKEQYNIELKQTA
EFLGKSYNSFLRTIRKNRKK
>CHY_1414 conserved hypothetical protein
MNRRELGQKWEELAEQYLRKKGYKILTRNYQIRGGEIDIVAQDGEFLVFI
EVRFRSDISFGTPSETVNEKKKASLKKAIKVYIHENFLYHLQPRVDFIGI
EQKDNRFFVNHYQNVLDF
>CHY_2213 DNA adenine methylase
MVIAKNFLITEYARPFVKWAGGKGQLLNTLERYYPLKLLQGEIKRYIEPF
VGGGAVLFNILQKFNIEEAYIFDINVDLINAYKVIKFNVDELVYYLKSLE
KRYYNLDNDNRKKMYYEIRDEYNSKVSNTKHIDIERAAKFIFLNRTCFNG
LYRVNKEGKFNVPYGDYKNPTICDERNLYLVNSLLQKVQIFAGDYRESAK
YISKDSFVYFDPPYRPLNKTSNFTSYSKSDFTDKDQIELARFYAQMNELG
AFLLLSNSDPKNEDPNDNFFDDLYKNFNIYRVMARRSINSDGQGRGLIKE
LLITNYKVE
>CHY_0026 putative DNA ligase, ATP-dependent
MLLEEREAPFDDGSWLFEYKWDGFRCLVFIEKEVKLISRNGKNLALSFPQ
LTEVKTFFPQDTVLDGEIIWGEGKKGSFSKLLGFSKKEENIFLVIFDVLR
FSGKSLLATPLLERKSFLKDLPPPFKIAPYVLEKGIDFFNKAALENYEGI
VAKKISSFYYPGKRTALWLKIKNYTKENFLLTKVFLKQGKVESLMVFDQK
ANKSYKIPFWGQNDLLNLLTPIVKEKNPREIILYPLLEVSIQYLEKTPGG
LRHPKIVGFSPAKGGNHGFK
>CHY_0928 ISChy5, transposase
MKQVITIQARLFPKKEEKEILDNLMRKWSSCKRYAFNRLLEGKARKELKK
ELQSLFGLNSRYVDDAILEAKEVLQSIRELGENPRKVIFGGKVLFYRLKS
KHLSSKQRQKYKKEWEDKRKGTLFSRGDKTKQGNLNLRVIEENGQFFLRV
NAGNRKWLFIQLNSSHKKWRKFAKTMLNFCPYSVRLQRKNNKYYAYISFE
DDLPNTAIDFSNGAIGIDLNAFPSHIAWAEIKKDGNLKSFGEIPTPHLWD
GRKEKRDYFAWVYANEIVKLALEKNKGIVIEKLAIKDKGYRGDYKGRKSR
RVKHSFSYRKLIARIKILAKRYGVAIREVNPAYTSIIGMLKYAPQFNLTK
DTAAAYVIARRGLVLREKIPLKYRELLKSLQSKSRSVSSATDGRNEGTAV
KGKTLPYKPWRVLRVALLTGALLDRPLYRDLSPLKRMLVSGMGEGG
>CHY_1721 prevent-host-death family protein
MIISATEFKSKIGKYLKLAEKEEIIITKNGKRIAKLTSAVEDKTALVKSL
IGILPHTISEKEAREERLAKHERLD
>CHY_0829 conserved domain protein
MVTSIEPEDLNVENSKNNGPKLLKKYLQYVREISNGNRDAANDILKSLLD
TNVLRDKIKPFDSGFEEEVYNALVKRGYIVDNQVGVAGYKIDLAIYDPIQ
SKYVLGIECDGAAYHSSKNARERDIHRQRFLESKGWKIYRIWSRDWWENP
QNEIEKIEKYLNALGFNKPAKMNWA
>CHY_1117 ISChy4, transposase
MLGSGSIIMLHELQARGKSIRAIARETGHSRNTVRKYLRAEGIPERKPRP
KRGSKLDPYKDTIQELMNLGIFNCEVIYERIKEEGYTGGRTILRDYVRQF
RPPKQVPAVCRYETKPGQQAQVDWGEYTYIDEETGEIRKLYVFVMVLGYS
RAIYVEFTNRCDVRTFIRCLIHGFEYFGGVTDIVLTDRMKTVILGTGENK
KPIWNPTFEDLAATLGFISKVCRARRPQTKGKVESGIDFVKNNFLPGRKF
VDYGDLNRQAIVWCEKKNRRIHGTTGERPIDRLKKENLKPLPALDKYQKF
LEEARKVHKDGFLSFDGVRYGVPWQYSGKEVVVRDKNGKIEILYDGKVIA
VHEKHYRSRSTVFLKDQYKGLKEAEGMFYPRPKAIKLSSLEVEKRPLGVY
ESLLEVGTV
>CHY_2518 ISChy6, transposase
MDEKVREKVALFRYGLLAPVLNGQVSNQQEYFAQICSKVHEVPFYGPKEF
TPKTLAGWLLSYRRFGFDGLKPKIRSDRGKHRVLSREQEEYLIALRKELR
DLPASVFYERLVDRGEILPKDVSYATVYRLLKKYGLVGNESPKSPERKRF
SYDTVNVLWQGDMSVGPYIVQNGKKLKTFLFAFIDDCSRLVPFAQFFFSE
KFESLRTVFKEALIRRGIPKMVYVDNGKIYRSDTFQIACASLGIILTHTQ
PYDAPSKGKIERFFGTVKTRFFPLLKEKPASSLEELNRRFWQWLEEDYHR
KVHASLGMTPLDVYLSQVSQVRMIDDPASLDPLFLKREMRKVKHDGTISV
NNKLYEVPPRFIGQKIEVRFDEDVVYVYENGIAVDKAIPVNFADNAKVKR
HRSLSFQAMLAGKEE
>CHY_2128 conserved hypothetical protein
MQIISASRRTDIPAFYGEWFMNRIREGYFIFKNPYNAKQMSKISLRPEDV
TAIVFWTKNPAPFMKYLDELQDRGYRFYFQYTLNGYGPEMEPFLPSVEKR
IKTFKKLSEKIGKEKVIWRYDPVIFSNVHSSDYHREKFSYILNELKDFTT
RVVISFVDEYRKATINFKKLKEEGIEIYQPPEVIIKSFAYFMAEEAKKLG
LEIQSCAENIAYLPAAGIMPGKCIDADYIEKVFSLTLPEKLHLKDKSQRQ
ECGCVVSKDVGVYDTCLHGCKYCYAGSYEAGKKNYEKHDPNSPLLIGKYD
GGEAEPTLF
>CHY_1406 mutT/nudix family protein
MEKTIKSNCLFKGNILTVVKDEVLLENGKISTREVVLHPGAVTIIPIFEN
KIVFVEQYRYPVKERLLELPAGKLNKNEAPEVTAYRELLEETGFIAKKLQ
HLTTFYTTPGFSNEVMYLYLAKELQKTDPRPDEDEIVKTVFIEIDKIKEL
LHSNKIKDAKTLIGLFWFLNFIAF
>CHY_0943 conserved hypothetical protein
MFDLSPELQNKLRELNSLLKNRRENLKNRVAIREMLKNRGAKFINLKNYD
SNENLLITGIDGSVNYYGVYPYRIFFFQAYAATPKGDKIIVSDVKAPFLE
DKPDDDPKDRVLPALELEASLKAIDRFKPDIMLFDGGFIRYRRHAPERWE
QVEKALLEKDVLGIGIIEEAQSQAIAKIVTDQIGVYDREILFGLLNPGEA
LFFDETLKDGFFTVFARLSRHPQAIAVDFLESQKERAKMALELLYALTPE
DSRGIPFFLDVIDSKTKLSKEAVEILLASCFDREILELYLRPLREERLL
>CHY_1815 helicase, RecD/TraA family
MTRNFLLEETINVEVKYIKFSRENFIIAGAKILEGERQGEIIDILGEIIN
CRVGERYRVSGKFVNNPNYGLQFQVKYYERERPNSPEQLISYLSNLGVKG
IGEKTAAKIVERFGMDSLTVILKDFSQLTKIRGISFEKAESLYQKLKEEY
LFEEAFNLLAPLNLEPHQIKTLLKFYRESLIEHLKENPYKPIHELYGFAF
APFDKLAKDWHFPPNHLYRIKASIVYVLKEALEQGHVYLPLAEVYNKGLA
LLGEGIGPETLDEGLSVLLRTGEVCLERDRLYLKKLYDAEKTVARKVAFL
LTITDKKINIKKPLNEVEKKLGISYDPLQKEALSLMFAEKKLFILTGGPG
TGKTTVIKGFIELYQRFFPKNKIALAAPTGRAAKRLSESTGMPAATIHRL
LEPEGETRSGELLFRYNKYEPLPYDLIIIDEVSMLDLPLAAALFEAITPE
CRLVLVGDPNQLPPVGPGQLLKDLLAVEEIPRISLKTVFRQGEDAGIIEV
AHRVLTGDWSELERLLGRRILEDVFFLPAKDTENITNLLLKVVKKLWENY
GYSPEDIAVLSPMRKGALGVENLNVLLQKLFNGFETQEVKFFGTSFKVND
KVMQIKNNYERGEDGVFNGETGFIKKIIKSGDEEEIIVSFDGKNIKYRKT
DLEELTLSYATTVHKAQGMEYPVVILVLHNYHYPLLKRNLLYTAVTRAKK
MLIVIGTPWALRQAVENIKEETRYSSLPERLGGVFEKGDLVEREG
>CHY_2158 CRISPR-associated protein Cas6
MRALIKFEVRSKALLPYNYQHALTALIYRGLGVESAKLATFLHDIGFRKG
KKTFKFFTFSPLSFTNYKTTKEGIIVFPGTASFTVSSPLPEFIDYLTSGL
WALRNFKIITLPVSIIEIAAIPLRNFTDEELFTLKSPLVLAIKSQEKATP
TYLSYVEDKALYKEKLLNNLKNKYLVYYGCEPRIDYFDFAFDERHFQTKL
PTRLITYKDQKIRGLCAPFKIKTNPELISLGYYAGFGEKNSMGFGFVE
>CHY_1236 putative primosomal protein DnaI
MTKCLICQDRGLILNEKGEYEKCQCLSKKDLSLKQEKSFIPPLYRNMTFA
DFDLSYYSKYHIDRERNISYYESAQRALKAAINFVKLLTTNQPVKGLYFS
GPVGSGKTLLAAIIANEALKAGKDVLFVVVPEYLEKIKQSFGDENDGYLI
EKALSTELLILDDLGAHNYTEWTKNTLYLIINHRLYYQLPVVITTNISLE
DLENYLGERTTSRIFELCHHYWLPVDLDIRLRKTRGM
>CHY_0405 conserved hypothetical protein
MIAYERFKNALTRGVLKPLYLFSGEERYFKERLFGEIKKYLGSNHEFNYE
ELDGHEVLPEEVVARAETVSFFGQRFIVVKNCRFFSGKHDEEPLLNYLKN
PAPRAVVIFSTELPVDKKKKIYQEFLKNGEEIEFSRLDEKEVQELIKTWA
DRAGFNLEREALIVLAQSYGQNLVELEKEFKKLVLYKLSEKIITLKDVLE
VSGQDQEISVFYLVEELLSGKINRPKLKERLTNQEEAVKFTGLVAKNLRQ
IYTVKVLQQKGKTLQEIAKITGIPEWLVKKTLRSAVHLSQEKLKKGITAL
ADLDVKIKSGERELTGLFERFFLLMKK
>CHY_2453 hypothetical protein
MGMWKCPGQDRSFWKIDDIFEAPCPHCGEMIEFWKDDITIKCPHCKNFVT
NPKFNPGCAAWCNYADKCLGAVAHEIQSQPEIVKTRVEVNVRKYLLNQPE
LLGLSLKAGEYAEKLAEKLQVSPLVPVVAAYFHKIAEKSTRQELARKAKL
PEEAYAAVEKLLAGEGNQQEMAIYNDSVKLASLHHKTLEEIEENYQQFLN
EFSLEASREYAQKVFDVKKKLARKK
>CHY_1702 prophage LambdaCh01, site-specific recombinase, phage integrase family
MRGHIRKRGNYYSVVLYLGKDENGKKKYKWIGGFKTKKEAEKVLAEMINK
VETNNFIFPEKITLKEFLNYWLENYVRPNLSPTTAYGYEAIINLHIIPFF
KNIELQKVRPIDIQQYYNSKRDELSGKTLLQHHRILHKAFDFAMKLQLIP
NNPIDFVDSPKAKKYKAKILDLKEIKTLLNALKDTDLEVPINLALSLGLR
RGELLALKWEDVNWEEGTIQIRRNLVRAGTKLILKEPKSETSIRTLKLSK
TLLTMLKNHRKKQIELKLMLGNEYKDTGFICCKNNGEMINPSTFSHQFSD
FLKKHGLPDIRLHDLRHTNATLMLKSNIPAKIASSRLGHSTVAITLDLYS
HVLTDMDEEVANKIDDIIYQK
>CHY_2036 putative DNA polymerase III, epsilon subunit
MIKSLKKFLEQNKNPLRTKIETINAFYPYDIPLLNLTYTVIDLETTGLKP
FQGDEIIAIGAVKIINGNITRPAFHAYVNPQREIPEVVQRLTGISPKTVQ
NAPPLTNTLTTLLDFARNSVIVGHSVNFDLAFLNKHLSSLTGKKLTPRLL
DTVDLGIYLFPREPNYSLENFAQKFAISLQGRHTALGDAVICAKVFLNFL
KILELKNINTWWQLSQEIYKVL
>CHY_2152 cas1, CRISPR-associated protein Cas1
MRKAIYLFSDGKLQRKGNTLYFESEGLKKYLPVEDVGEIFVFGEVEFNRK
LVEFLSQNEIILHYFNHYGYYMGTFYPREHYNSGYMILKQAEHFSDQSKR
IFLGRAIVKGSARNILQVLKYYAQRGKEVESNVELVENYLNKVTEAKEPN
ELLGLEGNIRETYYQAFDVILQDKTFLYEKRTRRPPQNYLNTLISFGNSL
LYSAVLSEIYKTHLDPRIGFLHATNFRSFTLNLDIAEIFKPIIVDRTIFS
LIGRKEIKKEHFEKGLEGFALTTEGKKLFITEFEEKLKTTIKHPELKRDV
SYRFLIRLELYKLEKHLLGEKPFEPFVSRW
>CHY_2151 cas2, CRISPR-associated protein Cas2
MFVILVYDVNQKRVAKVLKTARKYLYWVQNSVLEGEITEANFRRLKGELS
RIINQDEDSVLFYIFGSMKYSSRELLGIQKGGETNML
>CHY_2153 cas4, CRISPR-associated protein Cas4
MSEISIGGTLIWYYYICPRQVWFMGRKITPDEDNELLDLGRVIHAQSKKP
GVREMVLGGSKIDLITREDGELLVYEIKKSSKFKEASKMQLLYYLLEFKR
RGVEIAGELSYPEEKKREKVRLTPEDEAKLVAAEKDILRIIYQETPPPYQ
KTPFCKKCAYLEFCVA
>CHY_2155 cas5h, CRISPR-associated protein Cas5, Hmari subtype
MRKVIVFEIRGPAAHFRKFYTNSSSLSYAFPARTTLAGIIAAVLGLPKDS
YYSLLTGNKAHYALRLMTPVRKIMQTVKFVRTKTLKEVNGSGGPTMIPTE
IILPVRGRELIYRVYFYHDDPSFQEELAKQLALGPKFPVYLGRSEFLAKI
DFLGVFPGTALETNFVDTVVNLELLKDEELLFSTLHGEDLRYLKEKMPFS
FNPDRSIASTASVVYEIGGKKVGGKFSVPAIKIDSLGDVILFLEPGVI
>CHY_0402 comEA, competence protein
MNPFDDRSKLSLYGIIFLLLALVCYLWWTGPESPPLKETAEQEVITREVT
PKGTVVVHVAGAVYKPGVYVLEEGARVKDAIEKARGMLPLADDSSINLAA
KVSDGQKIYIPFKNETTTASASTNKAFGQQNALKGSGGQEAKVNINTATA
EELDELPGVGPATAAKIIEYREQNGPFATIEDLKKVKGIGDKKFETLKDY
ITVN
>CHY_2156 csh2, CRISPR-associated protein, Csh2 family
MGELIKNNSEILFIYDAKLTNPNGDPDDENRPRMDYETKTNLVSDVRLKR
YVRDYLQEKGKEIFVAKVEGETVNATERLEKLLGKTSKNISKDDVPVLLE
KLVDVRLFGATMPIKSEDGGSSLTFTGPVQFNWGYSLNKVELVESNTITS
RFSSTSGNEQGTMGKDYRLYYSLIAFHGIVAAHRAKFTQLDMETLSLLDE
ALVKAIPLLATRSKIGQYPRLYLRVEYVDDTTYLGDFRSFLEVNPKEGLR
DITDYSLEAGKLVDLLAENNPKITKILLYFDHNLKTTYHGEAKNFARLLA
EKLGDSKVSILNY
>CHY_2143 csm2, CRISPR-associated protein, Csm2 family
MNGKNNRANPGRQQNQENPVQEVLQAVDKFLNPIEDPKGELLISSAEKLG
SFLARVAKMTTSQIRNLYTEAKSINYKDSDGPYRVNLLRAKFAYIAGRYS
QVRDLQKIADKALAQIDSYEKFKRFIDFFEAVVAYHRAYGGKE
>CHY_2142 csm3, CRISPR-associated RAMP protein, Csm3 family
MEELKLLGKIVIKGKIKALTGLHIGGAQGNTEIGGVDNSVIKDEEGKPYI
PGSSLKGKLRSLLENHEGYLSATKLVLQKKGAEPIRIHICNEPECPVCII
FGRNHGKYTLADNQTELVISNATPTRLYFRDACLDEESIKDIKPNLDLEW
TEVKFENSIDRITSAANPRQTERVPRGAEFCFELVYNVLREEDKELFSKV
LTAMKLLEDDYLGGSGSRGYGKIMFKDLAVYWKSREEYETGNFSAQPIVM
GSLEELMQKNIPQLLK
>CHY_2141 csm4, CRISPR-associated RAMP protein, Csm4 family
MAYKIALIKPKGPLNLGRRTGDLTNSKILPGSDQLFSALLNAYSLYYGAG
ETKAFFEALLEKPVLELSSLFPAQVTGEKVYYFVPKPLTLDLTPYFTDVK
TAKKIEYLPVESLEKIAKGEGPGEGYVVQKAYLPVKQEYWHQSREIPRVA
LDRITSSSNIYYCTGITFAENIYLYFLYEIAPEWKTKFETALRVLADEGL
GGERTYGFGQFSIEFREDFSWPLQGEYRFLLSNYYPKEDELLKIADGVKA
YTLVESGGYVFSSFDRGVRKKSVRFFGPGSVFGFKPVGRLVDVTPKYFTE
HPVYRYGYAFTLPWKGGI
>CHY_2140 csm5, CRISPR-associated RAMP protein, Csm5 family
MATYEIEVLSPLFVGSGQKYPPLEYLISLEEEKFVVADMERVFTSPRFVL
NDFLDKVKRPGFFLGESYPWAREFPRFKFSSSRKTLMDLKIRKAEVLAPV
AEGQGFYLPGSSLKGSLRTLIYKINLPEIKETFNQKIKERLQNPRIKKEK
LSEAAEMALTGTPNYSLFRALKVGDSLPLGEESLGLYQVKVLSLTTSGYR
WKVLPGEQSTADLEQATSSFFIGFKPGVKLQGSFKVEEKYLNDDNFPLVN
KAFFNNWQERAKEVQRQFLQNELKFYEEIGLEELKKFYQKLIQDSNDGII
LQLGWGTGFNSKTLKEALPEEELKEVINWAKIKYRENFPFPKTRKIVVEK
GKPLYPTGWIKLRILD
>CHY_1651 dinB, DNA polymerase IV-AMBIGUITY
MKKRVIIHVDMDAFFAAVEQRDNPELKGKPVIVGGVPGERGVVAAASYEA
RKFGVRSAMSLWEAARLCPHGIFIPGNHKKYQEVSEKIFRIFREYTPLVE
PVSLDEAYLDVTGSQKLFGPGAEIGKKIKKRIFEETELTASVGVAPNKFL
AKLASEVNKPDGFCEVREDNVLDFLAPLPVEMLWGVGEKMKERLNDMGIK
TVQDFWELPEFFLRKKFGVLGQNLYYLSRGIDFREVIPERVPKSLGKEIT
LQKDSSDVDYLLGKLLGLTMAVGRGLRREGFYAGGISVKIRLSSFITYTR
HSRFFEPTWMDDVLYREAKRLFLENYHGELPVRLVGVTATPLVPVGGGRQ
ISLFGEDLRRENLYPIIDRLNHKYGNKTVTRAKILKISGRG
>CHY_2710 dnaA, chromosomal replication initiator protein DnaA
MLKNPVEELWEQVMEVLKNHVNKPSWDMWIKSIRPLGFLENTILVEVPNK
FAKDWLEEHYASLIKHILNLITNEDINFKLVVPNESAIEDSEGKTKSKKN
SPKKPSKFLEEGIFFTLNPKYTFETFVVGNSNRFAHAACLAVAESPAEAY
NPLFIYGGVGLGKTHLMHAIGHYILKNKPEMKVAYVTTEKFTNDLINSIK
DDTTEEFRNKYRSIDVLLIDDIQFLEKKERTQEEFFHTFNALYEANKQIV
ISSDRTPKELSTLEDRLRSRFEWGLITDIQPPDLETRIAILRKKAQLDNL
HVDDAVLNFIANEIVSNIRELEGALIRVVAYAGLHGEPITVDLAAKALKD
LLPSNHVKPITIPLIQQVVANFYGLTVDDLKAKKRTKSVAFPRQVAMYLC
RELTDASLPKIGEEFGGRDHTTVIHAHEKIQQDLQSDPNLKTVIRQLTEQ
IHKA
>CHY_0041 dnaB, replicative DNA helicase
MNELLMLPPHNIDAEQAVLGTILSNGESLYKVIEILKPEDFYRESHKLLY
QVMLELNEKGEPITILTVTEALKQKGDLERAGGVSYIASLLAMAVPEATL
ESHAEIIEEKAVLRHLIDLSEKIKRLSYTEKDAESILEEAERLVLEVGMK
RNQQSYTAVREIVYDAIERIEFLYQNRGNITGIPTHFYDLDRMLNGLQKS
DLIIVAARPAMGKTSFCLNVAQNAAIKSGVPVAVFSLEMSKEQLVTRMLT
SEAMVDQHRVRAGELSDEDWLRLTEVAGILAKAPIYIDDTPGLTIRELRA
RARRLKQEKNIGLIIIDYLQLLNGSRRAESRQQEISEISRALKGLAKELD
LPVVALSQLSRAVEARQDKRPIMSDLRESGSLEQDADIVMFIYREEYYKP
DTEKKSIAEIIIAKQRNGPTGIVELGFLKEFTKFVNLAKKYTE
>CHY_0959 dnaE1, DNA polymerase III, alpha subunit
MIEYVPLNIKTGYSFLESSIKLDGLMEKTARLGLKAVGIADTNLFGAAKA
FFAAKNFNLKLLLGLEVKSEAGPLWLYARDNEGYKFLVRAATQKYFGKEV
LSLAEILEARGLIILGGAEFLAAGLKNVLNFKEAFGDDFYLLAKVDDLLT
NPENIRALLAIAKKYRLKIAGSPNPRFLEKNHYFFYRLLCAMKNNVTLDQ
IKKRTSPYAYYLSPNEMAKIFAPINHSLKTTLEIAEKVGDFFPGDDLKLP
EFTCPGEKDEYLRKLCLEGAYARYGRISREVKERLNYELEIIKRLGLAGY
FLIVHDLVRFSRSQDLALGPGRGSAAGSLVLYLLGVTEVDPLKHGLLFER
FLNPGRKVLPDVDLDFGHLDREKVIRYLFQKYGDDGVAHIGTVITFAARG
AVREVAKALGYPEPLLNKITPLLPAFGGSSIEKAVRALPEVRKALEDPVM
RKLLTLARFFEGHPRHFSVHASGLVVARREDLEQIPLASSFRGEKITQFD
KDDVERLGFLKVDLLGLRLLTVVHRSRRSASIPLNDGETWKRIQKAQTIG
CFQLESDGMRYYLGKVAPRNIEELAQVLALFRPGPLESGQVDNYLLAKHQ
KAPPVYPHPALKPVLEESHGLVLYQEQVLKIAALVAGFDLAKSDDLRRAM
SKHDRKIMAELKEEFMMGAVKNGYSAADAEKIFSLLQNFAGYGFNKAHGV
SYAYLAYYSTFLITHWPKTYFTLLLNSDGGFYPPSFYLREAGRRGIKILL
PDINESQYGFTEVKDGIRIGFKDIEGVGPKAASIILEGRTRPYTSFWDFW
QRAGHKLSVETIRNLILAGAFDGFGVSRESLLYCLEVYKLFKPIPGLFAE
PNFSLKKEKEAGDYLKKAQKVIGVKFWLDLEAKVEKTGEGLIITGEVTFG
RRRYTRKGEPFLTLTLENRQEFYEVLVPASLYGKSFWSLTKKFVQIWAQE
KDERLFARKIVPIA
>CHY_1137 dnaE2, DNA polymerase III, alpha subunit
MSFVHLHTHSCYSLLDGAGKIKDLVGRAVELKMPALALTDHGNLFGVIEF
YKEAKAQGIKPILGVEVYVAPRTRFDKTPKIDDQLTHLVLLAKDRTGYQN
LLRLVSRSYTEGYYYKPRVDKQLLAENSQGLIALSSCLAGEIPELILSGQ
REKAREVAGIYRDIFGKENFYLELQYHGISEQKVVNRELIALSKQLNIPL
VATNDVHYILKEHAKTHDVLLAIQTGKSINDPGRMKFPTEEFYLKTPYEM
ELIFGELPDALKNTLNIAEQCNLEFEFGRYLLPDFPVPEGKTPAQYLKEL
CFQGLYKRYPNPGEEVKTRLLHELKIIEQMGFSGYFLIVWDFIRYAREKG
IMVGPGRGSAAGSLVAYTLEITDIDPLKYGLLFERFLNPERVSMPDIDVD
FCFERRQEVIDYLYQKYGEDRVAQIITFGTMAAKAAVRDVGRALDWPYSE
VDKIAKLIPNVLGITLEEAIETTPELKTLYQNNPKVRELLDLARQIEGMP
RHASVHAAGLVIAPEEIDKHIPLFKTSEGVVTTQFEKDTVEELGLLKIDL
LGLRTLTVIEKALDFIKKQTGKEINLKDIPLDDEKTYKLLGEGDTVGVFQ
LESQGMRQILKELKPTSIEDLIALVALYRPGPLGSGMVEDFINRRHGRVP
VEYPHPDLEPILRETYGVIVYQEQVMLIASVLAGFSLGEADLLRRAMGKK
KPEIIAALKNDFIERSVARGYPREKAEEIFNLIEYFAGYGFNKSHSAAYA
FVAYYTAWLKANFPVAFLAALLISVKDNLDKVTVYAEDCQRRGIKVLPPD
INLSEVDFTISGQEIRFGLAAVKNVGEAAAAKIIEERQKGPFRDFNDFLH
RIDKKTVNKRVIESLIKAGAFASFGFNRKTLLNNLDDALEFYSKKSNGVQ
LTLGDFLPEADRYNLRLEEEFSKLELLRMEKESLGLYLTGHPLAGLRSFI
QKHCNLKENKEKIYYPAILAEIKRTVTRRGEPMAFALLEGLNQTVEAVIF
PDCWLTYRDLLQEENILWFYGAVEEDEEGLKMIVERVYELDMSNALEVYL
KVSPGNIPLVQGILRKYPGPAPVYLYPGGKKLIKLSQEYWIDLKSPVLWE
IKKLLGDENVKTKTVS
>CHY_0454 dnaG, DNA primase
MSFQEVVEKIRNRVDLVDLVSEYTRLKKSGRNYVGLCPFHNEKTPSFSVS
PEKNLYYCFGCQKGGDIFSFIMEKERLNFKEAVFYLAKKYNIELPETGKA
YNKNEHLYRMLLLAAKFYHEILKTEAAGKARDYLQSRGITEETVKDFMLG
FAPSAKALPAFLSSKGYNPGELVKIGIVTKSYSGNLHDRFAGRLIFPIFD
REGRVVGFGGRALGEEKPKYFNSPQSVIFDKGKLFYGFKQARTTIREKRQ
AILVEGYFDVISLHQAGVKNAIACLGTAFTEEHLNFLKNYGYIEEIILAY
DSDQAGEKAAYRALEMLVRASADLSIKIIRLGEFKDPDELIKNRGATAFL
EEIEKAKTPAEFLLELELKEKSSLNLNEQRALLKKLIPYLVLEYEKTPAL
FAERIGGIASKLKMSEGALVDEIRREIYKNEEKSLNNSSFGENITNEHKN
YGLLKVESELLGLLLEYPEYQKEFLNDFFFYEFQGKNQEVFNYLKENKFP
DREDPLYSYMTYLRINCPEGDPKTLYEGYVRYLEEHYKKQQVQRLTLEIS
LAEKEGNWEKLQLLLNKLQELTQKN
>CHY_2709 dnaN, DNA polymerase III, beta subunit
MKFTCPTSILSENISLAQKAVSTKSPFPVLTGILFEANEQNSTITLTATD
LQMSVETSFPAKIIEGGSVVLASKFLGDIIKKLPETELMFEYLPNEGKCV
IKYGASEVSVATYRPEEFPKNEEVIDGESFYISGEEFSTFIKQVLFATGT
DESRPVFTGVLFEIVGQELRLVASDTHRLAFRKTFIKREDTGKNINVIIP
SRTLHEAVRIFGTVDELLIKISEGQVEFSGNGIKLTSRLIEGQFPNYQQV
IPTAFKSNILINKKYFLDSLERAALLPRDKDKTPVAKFYLERENMIITSQ
SESGSIREELPISLEGEEFTVAFNTRYLIDVLKVLETEEIYLSLTGPLNP
GVVKPVNDENYLCLVLPVRPS
>CHY_2388 grdX, grdX protein
MLVITNNPKVKDYIQRFTLEPRFTIIWVDGYTEDVLAKVRDLCHLGYKLL
THPLTGSIKPNQTPYKTVVLEKLEQESDYDSILTAEISYLKTKELLEKRS
RPKEIELFLEDFAVIDLDFFKSFLYSMGLIT
>CHY_2704 gyrA, DNA gyrase, A subunit
MFSIGKVLPVKLEEEMKSSYLDYAMSVIVGRALPDVRDGLKPVHRRILYA
MHILGMTPDKPHRKSAHIVGEVLGKFHPHGDVAVYDAMVRMAQDFSTRYP
LIDGHGNFGSVDGDSAAAMRYTEARMAKITVEMLRDIDKETVDFMPNYDN
STKEPVVLPSRIPNLLVNGSSGIAVGMATNIPPHNLREVIDGVVKMIDDP
EVEIGELMKIIKGPDFPTGGKIMGRQGIRQAYTTGRGTIKVRAVTTFEKL
SGGKTAIIVTELPYQVNKAKLIEKIAELVRDKKIDGIADLRDESDRKGMR
IVIELKRDANPQVVLNQLFKHTQLQDTFGIIMLALVDNQPRILNLKEILF
YYLEHQKDVVTRRTRYDLNKAEERAHILEGLKIALANLDEVIKIIRGSKD
VDTAREGLMSRFGLTEKQAQAILDMRLQRLTALEREKIDEEYRELIKKIE
YFNSILADERVLLGVIRQELLEIKEKYGDARRTQITNEESIFDEEDLIAE
EDMVITITHQGYIKRLPVDTYKNQRRGGRGVTAMATKEEDFVRHLFVTST
HNYLLFFTNKGKVYRLKVHEIPEAGRQAKGTPIVNLLYVDQDERITAIIP
VKEFTDDHYLFMVTKNGIVKKTVLSEYDSSRRDGIIALSLEEGDKLIDVK
LSTGQEEVIIGTKKGMAIRFSETDVRPMGRTARGVKGITLSPGDEVIGLE
VVDEQAELLTVTSKGFGKKTPFSEYRVQGRGGKGIINMKVTQKNGEVVGI
VAVRPEDEVMAISGEGIMIRVKAAEISTQGRATQGVTLMKLNKDDQLTAV
AKIAAQEDEEND
>CHY_2705 gyrB, DNA gyrase, B subunit
MELEKNGIKYGAEEIQVLKGLEGVRKRPAMYIGSTNEKGLHHLVYEVVDN
SIDEALAGFCNRIEVIIHKDGSITVADNGRGIPVDIHPEVGKPAVEVVLT
MLHAGGKFGGGGYKVSGGLHGVGVSVVNALSEWLEVRIKRDGNLYYQKFS
RGEPITELKIIGKSKSTGTIITFKPDAEIFETVEFNYDTLAKRLLELSYL
NKNVKIILKDERINKEEIFEHSGGIKDYLKYLNKNKEPLHKIIYFEKEKD
EVVVEVALQYCNSFSENILSFTNNINTTEGGTHEIGFKTALTRVINDYAK
KYNLIKENNLSLQGEDIREGLTAIISVKVPDPQFEGQTKTKLVNTEVRSI
VDSIVSDYLSTYLEENPAVGKKLIENAIRAARAREAARKARELARRKTAL
ESNTLPGKLADCSEKDPSLCELYLVEGDSAGGSAKQGRDRRFQAILPLRG
KILNVEKSRLDKILANEEIRAMITALGTGVDKDFDIEKARYHRLIIMTDA
DVDGAHIRTLLLTFFYRYLRPLIENGYVYIAQPPLYKVKKGKLEKYLYSD
DELERYLNEIGREGVTIQRYKGLGEMDPEQLWETTMNPETRTILKVTLED
AAKADEIFTILMGDKVEPRREFIEKNAKLVRNLDI
>CHY_1397 hexA, DNA mismatch repair protein HexA
MSFTPMMKQYLDIKKQYSDCLLFFRLGDFYELFFEDAVIASRELEIVLTG
RDAGQEERVPMCGVPYHSAQGYIAKLLSRGYKVAICEQVEDPKKAKGLVK
REVTKIYTPGTVTEEFFLQEKTNNYIIALAEKDGLIALAVAEVSTGYLGI
TSVDEGKIEVLASEIRRLAPTEAVVLKNFKNNFLLKDITGIVNYLEKLPA
EEIEIAFKGPEASKEAYKILISYLKRIEPAVLSIFGQPEFYQIDSYLYFD
ESTRKNLEILRNREDNSSSLLGIIDFTQTAMGARKLKEELTKPLLNLKAI
ADRLDAVEILVNDYELRENLRENLKNLYDLERLSIKLVCGTINPKDLIKI
KQSLPQIWHIKNSINHVKNKSVLFAEIYKNLPEMREVYNLIDKSIVDDPP
VSPKDGGIIKNGYNPTVDEYRKAREEGQDWIINYEKKERERTGIKSLKVN
YNKVFGYFIEVTKANLHLVPADYQRKQTMVNAERFITEELKHYENLILGA
SEKLANLEYELFCEIRSEILKYQEDLKRAASAVALLDFLISLAVAAIEYD
FTRPVITAEPVLEIKNGRHPVVEKSVGRANFVPNDLYLDTKENSLLLITG
PNMAGKSTYMRQAALIVILAQIGSFVPAEYARVGLVDKILTRIGATDDLA
KGQSTFMVEMIECNNILRNATSRSLILLDEVGRGTSTYDGISIAEAIIEY
IQKKIKARTLFSTHYHELTGLEGEIPGVKNFTVLVQEKGEEVKFLHKVVP
GKTDKSYGIYVAKLAGLPREVVERAYEILARFEDKGLKVKDTVPVQLSLF
EEKPEPSGVIKELIELDLIRMTPLEALNKLYELRQKALGEK
>CHY_1396 hexB, DNA mismatch repair protein HexB
MPKIKRLPDEVIKKIAAGEVVERPYSVVKELVENSLDAKAQNINVYIEEG
GLGKIVVEDDGIGIPPEELPDALLRHTTSKIASFDDLYYLESFGFRGEAL
YSIAAVSKISIKSRVRGENNGYELIAHAGEVINLTEVGMAYGTVVTVSDL
FFNTPARKKFLKSGQTEAGLIRQFIEKMAILYPGVKFSLFIDGKKIYSSA
GIQEQLGLLARFWGLEKGNLLMLEEKLGEGFFIKGGIALPPAGKPHRKLQ
VFAVNKRLVKSGILTKAIDDAYESLLPTGLKPLVFLEVVVPGTWVDVNVH
PQKLEVKFMDEQKIYLDVRTIIRNKLVNAKSSSLKSFSPARETNTKSEDN
DYWQVTYFAEEFSGNSDKLLEKEDIFSTSDNLTFSLNKDFAKELNFQVIG
QFSLKYIIVEKNDKLLIIDQHAAHERILYEKYQTKLNPFYSQVLTFPVRI
KASPELEAFLQENYQNFLEIGLHIEPFGPGEYLVREIPEDFPQNNIANVL
EEYLYEIMEQKEQVSFREKALKLFACKNAVKFGEKLTYSEMTNLVKELFK
TNYPLSCPHGRPTIYELSLTEINKKFFR
>CHY_0205 huP, DNA-binding protein HU
MNKAELVSVIAEKAEMTKKDAEKALNAVLAAIEEALKKGEKVQLVGFGTF
EVRERAARKGRNPQTGQEIEIPASKVPVFKPGKLLKEKI
>CHY_1100 ligA, DNA ligase, NAD-dependent
MDKEAVKKRIEELRALLHYHNYRYYVLDQPEISDAEYDRMLRELISLEQQ
YPEFITPDSPSQRVGGEVAKEFREVAHLKPMYSLDNAFGPEDLKEFDRRV
RSLLPGQEVEYEVELKIDGLAISLVYENGVLVRGATRGNGTTGEDITANV
KTIKAIPLKLRNPIPLLEVRGEAYMPKESFARLNEQREERGEPLFANPRN
AAAGSLRQLDPKVTAERDLSAFMYAIGEVQGYEPKTQAELMEWLSELGFK
VNPYREVFNNIDDVINYCQSWHEKRFSLPYVIDGLVIKVNSLAQQEALGF
TAKSPRWAIAYKFPAEIAETRLKDIIVRVGRTGVLTPTAIFEPVSLAGTT
VTRASLHNEDYIREKDIRIGDIIRVQKAGEIIPEVVEVVKEKRTGAEKEF
VMPDTCPVCQGKAVRLPGEAAWRCTNASCPAQLKEGIVHFASRGAMNIEG
LGPAVAELLLEAGLIHNYADLYYLSAEEVARLPRMGKKSAENLINAIEKS
KQNSLERLIYGLGIRLVGEKAARDLAVHFKELDKLIAAGEEEIMAIPSVG
PKMAASIKAFFAQKENLELIEKLKAAGVNTKYLAEVRDNRLEGLTFVLTG
TLSSFTRKEAEQLILSLGGKVSSSVSKKTSYVVVGEDPGSKLTKAKELGI
PILTEEEFRQMVMS
>CHY_0200 mfd, transcription-repair coupling factor
MSKNIFSLMQENSEFKRLLEGINKKRIQLIYGSYGTARTFLMATVAKALN
RPLLVITENEQVAREIAEDLEFFLGDKTSRFFYREGFLFDLTVREGGELK
ASRIELLKRLSRGEKPHTVVNYEALTRKYPPLQSFARWKRELRVGDVVEL
EELIRYLSQIGYERVDQVEAPGQFSQRGGIVDVYVPGEVPFRAEFFGDEI
DSLRALDVESQRSQANLNEVVIYPAEVAVAEEDLLLEVKQKISADIEQQV
KKLIQQNKREAAGRLKEKGAEVLNILGKSEVIEKLLPYFWSGVSLLDYFG
DEYLVFLDEPGRFGEQINSLEKLRRESFTEALSGGYTLPKQAEVFYEEEQ
LMALLRGRIAVITSLLPKTPRFIGDYDPHNFAGRKPPNYLGKEKLFFEDI
KNFLANNYRIFILRGREEAAVALKNELLKRNFPASFVEKFEVEIAPREIK
IGLGVLNSGFEFPQQKLLVYTDVELAGRAVKARVTKAVLGERAEEPFSPG
DYVVHPVHGIGKYLGIKPVEVGGNVKDYLVIAYQGEDRLYVPPEQVGNLQ
KYVGVDGEPPKLSRLGGSDWQRVKNRVKAAVREMAEGLLELYAKRMAKPG
FAFSPDTVWQKEFEERFPYEETPDQLKAIEEVKRDMEKPKVMDRLLCGDV
GYGKTEVALRAAFKAVMDGKQVAVLTPTTLLAQQHYNTFKERFSGYPVEI
RLLSRFQTAREQKEIIKELKRGKVDIVIGTHRLLQDDVQFYDLGLMIVDE
EQRFGVAQKERLKILTETVDVLTLTATPIPRTLHMALMGIRDLSVLNTPP
ENRFPVQTYVLEEDPFIIRDAIRRELGRGGQVFFVHNRVSDIDEVAAWVQ
SLVPEAKVAVAHGQMKEEQLERVMLEFISGKYDVLVSTTIIETGIDLPNV
NTLIIKNADRFGLAQLYQLRGRVGRSNRIAYAYLMYEKDKVLREAAEKRL
AAIKEFTEFGSGLKLAMRDLEIRGAGNLLGPEQHGHIAAVGFDMYMKLLQ
ETVAELKGQVTSEEVEPQLELNLTAYIPESYIPDEKQKIEMYRRLSRTRN
LEDLEDVVDELIDRFGEIPPEVENLIRLIKIKIVASKLKVKGIFQTDEEL
KIQFFPNPEITAEKLSRISGQFKGRVIFGMNPDLEIRVRTKGKMGQEIFS
ILERIFGQLS
>CHY_1649 mutM, formamidopyrimidine-DNA glycosylase
MPELPEVETIKRTLAPKILGKTIYRVEVYLPKIIKNVSVEEFTRRVVGKE
IVALKRRGKYLLIDLSGKETVTVHLRMTGKLLILPKGSPKDKHTHAIFDL
GDLELHFNDIRQFGGFSFEMPEIGPEPLEDEFTPEYLKTKLKASQKNLKA
VLLDQKIIAGIGNIYADEILFEAGLSPKRIAASLSEDEAEELFKAIRKIL
ALGIEYRGTSIRDYVDAENQQGSFQRLLKVYGKNGSLCVRCNNVLIRERH
AGRSTHYCPHCQK
>CHY_1564 mutS2, DNA mismatch repair protein MutS
MNQKTLEKIEFPDIINKLWQKAESFPGKQLALKVRPLSDSKIIEEKLLEV
EEGLSYLRFKTVDLSVLSDFSEIFLKLSKESMLTGQEIYRLGQLLKVSKD
TFFEISRGAFPRLKQIVKLLFFDEALVKDIERSFWPEGTVKDEASPELKR
IRGQIARLKDKMREAVEKYLKEPELAKYLQEPLISVRGDRFVLPVKASYK
SQVPGIIHDRSNTGQTLFIEPYSAVEAGNELKTLELQEKEIIEKILKDFT
QRLACNLTEIKRTYELLGEIDLIVAKARLALELDAYKPRISENGVLSFKQ
ARHPLLGKKAVPFDLTLGKEFDLLIITGPNTGGKTVTLKTIGILTIMARA
GLFIPASPETEIGLFGEVYVDIGDEQSIVQSLSTFSSHLLNLKFILENAR
EGDLVLLDELGTGTDPREGAALAKAILEELRGKKVKVVATTHTSELAAYA
IETERVENASVEFDPESLKPTYRLHIGKPGRSNALYIAQGLGLKEQIIEK
AKSFLKEEELKLDKLIFDVEQEKRQLEKAKEEVANLLISLKEKEAKLNDE
LENLEKTKEEIIRKYREKYQQKLLEIERKGKLVIEEIKEKIKTYEEKNLA
KLLEEARQKTKEFSQNFALPFEPIKPYRPKVGETVELVEVGQKAEVLAVG
ENYAIVQAGIMKLNVSFDQIRPAQKQEKENEKGQVKKAGLELTKKQNFNL
ELDIRGMNTLEAEPVVEKYLDNAYLAGVEKVRIIHGKGTGALKKFLWDYL
REVPFVKKFNFAPQNQGGDGATEVYLK
>CHY_1339 mutT, mutator mutT protein
MTTVTAAIIIHKGKVLITRRKLNDKYLPGKWEFPGGKVEQGETPEDCLVR
EIKEELDLNIKITQFFGESIYEYPFFKIKLLAFLAQPVSGKIKLNDHAEA
RWVEIKDLNFYDFAPADLPFVEKLLKLTT
>CHY_1757 nfo, endonuclease IV
MNVGLHLSIAGGLLKLKERIIKNKTEGVQIFSRSPRGGEAKPFNEKELKG
FLEFKEEYKLYPLVVHVPYVMNLASPEEEMFQKSVAMIREDLYRSDQLHA
DFLVVHVGSHRGAGEERGLARMVEGLKILLSENFKTRILIENTAGSGNEM
GYSLDHLAYIISETGHEELGICLDTCHLLAAGYDDVSPEGISAFSREFRE
KIGEERFCLLHVNDSKHPIGSRKDRHENLEQGYIGREGFINLLNSPFFKR
VPWILETPEPGIEEDLVKLKKLREEVLKIPADR
>CHY_1121 nth, endonuclease III
MTGKKAHKIAAELEKLFPVAKTELNFQNIFQLLVAVVLSAQSTDRQVNKV
TEKLFLFVKEPRDLLDMGEEELSRQIRSLGLYRNKARNLIKIAEILDREY
HGQVPDSFAELLKLPGVGPKTAEVIVGVGFNKPSFPVDTHVFRVARRLGL
SKARTPEGVSFDLKKIFPPNSWIDLHHRLIFFGRRICKAQKPSCNICPFP
EFCQKEESDV
>CHY_1644 nucH1, thermonuclease
MKRVRVKVIWFIFILFALFLQGCAGDVDAATNFIPAKVVKVSDGDTVKVK
LSSGKEIRVRMIGVNTPELSHPELGIKEQPYGKEAFNYTKKVLYKGRIIF
LEYDVQKQDKYGRDLAYVWLKKPVKVTEEEVRAKMFNAHLLLEGYAQVMT
VPPNVKYSKLFVKFQKEARENSRGLWK
>CHY_1699 nucH2, prophage LambdaCh01, thermonuclease
MSSIEKIKQSLKEQKSLLIGLCFFILVYVIGLTHPQTIQEKEDNAVNKTT
TTQKQEQQSTSEFVPAIVVRIHDGETITVQLPDGAKEKVRLIGIDAPVED
TLINLSSKDPAKLTLADLWGKTVYLEKDAVNRDSNGYLLRYVWLEIPDIK
PNVISDSEVQKKMVNAILLLNGYGKYISTSPNKKYESELARSEFEAFAHK
KGIWSISTAPHAPPDSNKSVKKQNIIVYVTLTGHKYHRSWCRYLKYSKIP
ISLGDAINEGYEPCSVCNPPQ
>CHY_0809 ogt, methylated-DNA-protein-cysteine methyltransferase, selenocysteine-containing
MECDIITTDYGYVAIAVSEKGVYAVSLPKATPKAALEEIGVEVNPVKSEL
FCRTAELLKRYYAGEKVDFSSLPLDISWASPFARKVYEKLRKIPYGATVS
YGELAGLSGNPKAARAVGRAMATNKIPVIIPUHRVLAAGGGLGGFAGGLS
LKEKMLKMEKQAL
>CHY_1099 pcrA, ATP-dependent DNA helicase PcrA
MEKLLATLNPAQREAVTHTHGPLLVLAGAGTGKTRVLTFRIAHLLYRKMA
YPHEILAITFTNKAAREMKERVERLISGSAREIWISTFHSFALRILRNDI
EKLGFSRDFTVYDEEDQLQVIKECLKELNIDDKRFAPKAIAYHISSAKDK
LISPRQYRDDADDLFKEKVAIIYNMYQEKLNKNNALDFDDLLYYAVRLFE
NYPRVLEYYQRRFKYILVDEYQDTSHAQYRLVNLLAQKHRNLCVVGDPDQ
SIYSWRGADITNILNFERDYPEAKVVILKENYRSTQKILDAANAVIAKNR
MRKEKELFSTKESGHPVYFYPAVDEKDEAAFVALTIESLVKSGEYNFNDI
ALLYRTHALSRNFEEAFMQRGIPYVIFGSRRFYDRKEIKDIIAYLRIVAN
PYDKVALKRIINEPKRGIGEASFAKVEAYADETGLPIGLLLLRDEALALV
SGKTRKALKEFGEMLLWFRELKDRVSVTKLTEEILERSGYLPALKAEDTM
EARARIENLNEFLTVTQAFERESEDKSLEAFLGTISLLTDADTEEGGENR
VRMMTLHAAKGLEFPVVFLVGLEEGIFPHSRAIFSIDPQELEEERRLCYV
GITRAQKRLYLTRAWRRTVYGRTDFNEPSRFLDEIPEELIESLLETVSGG
NPVDKTLSPGGEKQKGAFSPGDRVSHKKFGVGTVLEVKPKEGDVIIKVRF
EGGEVKELLGSFAPLVKV
>CHY_1650 polA, DNA polymerase I
MGKVVLVDGNSLLHRAFFALPPLKTTKGEPTGAVYGFLTMLFRVIKDEKP
EYLAVAFDISRKTFRTEQFTAYKGHRKEAPDELVPQFALVREVLKVLNVP
YIELDGYEADDIIGHLSRAFAGQGHEVVIYTADRDMLQLVDEKTVVYLTK
KGITELVKMDLAAILENYGLKPKQLVDVKGLMGDPSDNIPGVPGIGEKTA
LDLIKTYGSVEEVLAHKDELKPKLREKLAEHENLAKISKQLATILREIPL
EISLEDLKVKEPNYEEVAKLFLRLEFKSFLKEIEPKIKKEYQEGKDLVQV
ETVETEGQIAVVFSDGFYVDDGEKTKFYSLDRLNEIEEIFRNKKIITDDA
KGIYHVCLEKGLTFPEVCFDARIAAYVLNPADQNPGLKGLYLKYDLPVYE
DVSLNIRGLFYLKKEMMKKIFEQEQERLFYEIELPLTPVLAQMEHTGIQV
DREALKEMSLELGEQIEELIREIYVLAGEEFNLNSPRQLGVILFEKLGLP
VIKKTKTGYSTDAEVLEELLPFHEIIGKILNYRQLMKLKSTYTDGLMPLI
NERTGKLHTTFNQTGTLTGRLASSEPNLQNIPIRLELGRKLRKMFIPSPG
YDYIVSADYSQIELRLLAHFSEEPKLIEAYQKGEDIHRKTASEVFGVSLE
EVTPEMRAHAKSVNFGIVYGISDFGLGRDLKIPREVAGKYIKNYFANYPK
VREYLDELVRTAREKGYVTTLFGRRRYIPELSSKNRTVQGFGERTAMNTP
LQGSAADIIKLAMINVEKELKARKLKSRLLLSVHDELVLEVPAEELEEVK
ALVKGVMESVVELKVPLIAEVGAGKNWYEAK
>CHY_1772 polC, DNA polymerase III, alpha subunit, Gram-positive type
MDKIKSILESLGQKAFLDKVQVDPRNQKWELYFKAPHYISLKEFDGLKAA
ILEELPDLNVSIDLAVENFRDTDIELLLEDINYLLVQKLPRLRGELREAG
LTFDGENIIFETANEIVFDTIKRKKVVETITKFLAKVAPDYKFIAKFKEE
ANEVLDWQLEMEEELVQKLWEEKVAEREGQENKEEVPVKLSIGKEIKETP
CKIANLTEEEKNVVVSGVIFDLEVKKLKTERILITFNLTDQTDAISAKLF
LKKGEEEKASLIKDGMYVKVRGEVQFDRFADELVLFINDLEEIEKPAGRM
DLAETKRIELHLHSKMSAMDSVVDLEKLFQTLKSWGHEAVAITDHGVVQA
FPEAAELSAKYGIKVIYGLEGYLVDDGLPVVFNPEPLSLKETPIVAFDFE
TSGLSSQRDEIIEIGAVKIFDGEIKETFSVLIRPQKPISAKISELTGITN
DLLEKEGLDFGEAIEKFLRFCDGSILLAHNAAFDYGFLRQALKRLGHERK
FSVVDNLALVRILFPELKNHKLKTITEHLEVSLNNHHRALADSYALAEVF
LKLLPRLFERGLYSLDDLAKINYNYINDRSKTYHVSILVKNQEGLYNLYR
LITLSHLKYFHRHPRIPKSELMRYREGLLIGTACEAGELFTALLENQPES
RILEIARFYDYFEIMPKGNNAFLLRNQRLKSEQELEELNRKIIALGEKLN
KPVVATGDVHFLEPEDEIYRRILQKGQGYDDAELQPPIYLKTTEEMLKEF
AYLGQEKAYEVVVDNPRKIAEQIEEIKPIPDEFYPPIIEGADRQIYEMTY
QRAHELYGDPLPEIVEKRLKRELDAIINNGFAVLYLIAHKLVKKSLDDGY
LVGSRGSVGSSLVATMTMITEVNPLPPHYLCPNCRYSEFITDGSYGCGAD
MPDKNCPRCGTLLKKEGHDIPFETFMGFEGDKVPDIDLNFSGEYQPRAHK
YTEELFGKDYVFRAGTIATVADKTAFGFVKKYFEETGRPARQAWINWLTN
GIVGVKRTTGQHPGGLMVVPKNNDVHRFTPLQYPADDKSAGVVTTHFDYH
SISSRLVKLDILGHDDPTVLKMLEDLTGIDPRTIRLDDRKTLGIFSSTEP
LGVTPEQIRTTVGTYGIPEFGTRFVRQMLEDTRPKSFTELVRISGFSHGT
DVWLNNAQDLIRAGICKLSDAISTRDDIMIYLLQKGVPPKKAFKIMENVR
KGKGISEEEIAVMKEHGVPDWFIGSCQKIKYLFPKAHAVAYVMMAFRIAY
FKVYYPEAFYATYFTVRADDFDLPVILAGPEKIWKTLDELEQRGGNLTAK
EKGLVTVLEVALEMLARGIKMLPVDLEKSDATRFLITPEGILPPFVALPG
IGEAAAINIVKAREEGMFVSIEDLKTRGKATKAVIEVLDAHGCLKGLAPT
SQLVLFA
>CHY_1485 priA, primosomal protein N'
MTVYAQVALLRPSRHLDRLYTYKLPSSDIKKVAIGAKVKFNFNNRLEEGF
IFSLGQEKDFSGEIKPILEVLPEELWLTPELVEMVKWISEYYLCSITEAL
TLISFPEKIYQDVEVFCTVVDETKLKEKIKKSKRLQNDEMVISLLKDKRG
LVRTTSTIKKLVKQGILQIREKPLPNLPPIELTESQKQVYQQIKRDMPKN
FVGLLHGITGSGKTEIYLKLAGDFLNHGKQVLFLLPEIGITTQMVARVKK
YFPENTLVYHSRLSAREKFTVWRELKKGSPVLVLGTRSAAFLPFQNLGLI
ILDEEHELSYKQEETPKYHVREVVYWRAKRLGIPLLLGTATPSMETYAAV
ISGLIKYYFLGKRYQNRPYPQVIIVDMFKEAKEGNTGIISSVLQKKISER
LQKGEQVFLFLNRRGFAPMIMCRKCGYFYRCPDCDVSMTYHKEEKNFQCH
YCGKKIAFTRKCPACQEISLDLYGYGTQRVEEELKKLFPAKIFRVDYDTM
RSKNSYDKILEAIKNKEADIIIGTQMLAKGFDFPDLTLVGVLNADQSLNL
PDFRAGERSFNLLTQVAGRAGRGLVPGEVIIQTFNPENYIIQAVQRGNFQ
QYALKELSLRKQTGYPPFSKIFRLIIAGEDEQKVIEGANNLVNLLKNASK
FSPEIEIIGPAAAPFYKLKRNFRYHILLKTNKSSFAREVLKAGLQEFKKS
SLNHKLTLVLDLSPQIFL
>CHY_0341 radC, DNA repair protein RadC
MGEKIKNLPEELRPRERLLRHGPESLNPAELLAVLLGSGTPQENALELAL
RLLTTFGGLKGLIEVHPEQLKSFKGIGQAKAAKLLAALELARRYYELTGE
NKLNFLNPDDVYNYLRYKIGHKKQEQVVVLYLNTKNQLCGENIVAIGGVN
HAGVSPGDIFREAVKIGAYAVIIAHNHPSGDPTPSKEDIDFTGRVKKASE
ILGIKLLDHIILGENKYISMKAERLF
>CHY_1166 recA, recA protein
MNDKLKALELTISQIEKQFGKGSIMRLGENTGKFQVEVIPTGSLALDLAL
GVGGVPRGRVVEIFGPESSGKTTVALHIIAEAQKMGGIAAFIDAEHALDP
VYAQKLGVDIENLLVSQPDTGEQALEIAESLVRSGAIDVIVIDSVAALVP
RAEIEGEMGDAHVGLQARLMSQALRKLTGAISKSKTVAIFINQMREKVGV
MFGNPETTPGGRALKFYASIRMDVRKIDVIKQGNDIIGSRTRVKIVKNKV
APPFKQADFDIMYGEGISKEGSLLDVAVELKIVQKVGSWYSYNDERLGQG
RENAKEFLRQNPEIYREIEQKIREQVLNSPESSSFKNSEEFEE
>CHY_2707 recF, DNA recombination/replication protein RecF
MFVDRLQLLNFRNYEELLIDFSPGKILIYGANGQGKTNLIEAIYYLVIGK
SFRGKDNSLIRFGAESFQIGAKISKNGQKTTLGVEYSVKGKFFLKNGQKQ
KSFSSILGNLKGVLFTPDEPVIFFGFPANRRKALDLFLAQTSKTYLLNLI
YYQKVLTNKNALLKQVWNVDNLIEAWNYKLAEFGAEIIKEREKCLKILND
IINELNAQLRFLPGKIEASYKTSGADDKEKIFELLKQKYTEEKDKKQALF
GPHRDDLNFYVNGRDLKIFGSQGQKKGALLLFKLSQAVYMAKVSGEKPVV
LLDDLYSEFDKEKREALEGFFLKYSDQVFITATEPIDLKNYHQVVFIENG
KVS
>CHY_1468 recG, ATP-dependent DNA helicase RecG
MDIPVQYLKGVGPQKAKLLQKLKIETVKDLIYYFPKRYEDRSSLKKISEL
INDEVTTVLGTVVEVKEVIPRDKLKILKVGINDGSGTAYGCFFNQSYLKN
VFIKGKKVYFYGKVEKRFFETNIYVYEYEFWDKELLHTNRLVPIYPLTEN
LSPKTFRQLIKNALDKYLEEITEPLPEEILRKYSLPDLKQALMNLHFPES
SEQSELARRRMVFEEFLLFFLAIGLYKENYQKKPGIVIAGSGELEKKFID
SLPFKLTSAQEKVWREIKEDLAAKKPMNRLVQGDVGSGKTILAALALVKA
VEAGFQGALMAPTEILAEQHYLNLSRLFAPLGIKVVLLSGSLSSGKKEAV
YKAIKNGYADVIIGTHALIQEAVIFDNLGLAVIDEQHRFGVEQRSSLVEK
GLYVNQLVMSATPIPRTLALTLYGDLDVSIVDALPAGRKPIKTYWLSSQD
KGKAYAFLLKQVAEGRQGYVVCPLVEESEKLQVEAVTKLYEKLSKKFPQF
KWGLMHGRLKPAEKEEVMENFRKNNIQILVSTTVIEVGVDVPNANVIIIE
DAWRFGLAQLHQIRGRVGRGEHQSYCFLLGNPRNQEGIVRMKIMEKYNDG
FKIAEEDLKLRGPGELSGTRQSGAWEFKLADIVRDQAILFLAKKEADEIL
TNKENHRALITLALEKYGDKINMLQKN
>CHY_2224 recJ, single-stranded DNA-specific exonuclease RecJ
MEKKNWLIFETSHLGEKYLEDFFRIEPLTAKMLVNRGIFHPRGVRRFFWG
NIDDTYSPYLLKDMEKAVKLILSGRNTEKFLIYGDYDADGLTSTALLYDF
LRKRGFNVDWYIPNRLDEGYGLHLPPLVKALEEGISFIISVDCGITAVDE
VKTVREMGAKVVITDHHEPQEEIPVAEAVINPKQKDCPYPFKGLAGVGVA
LKLVLALGMALGEREEDILDQYLDLFTVGTIADIVPLVDENRIFVIEGLK
RLAATGRPGLKALKEVAQLNREEITTRDVGFILSPRLNAAGRLKDPALAF
ELLIEENYERALALAYRLSEENQNRQGIEAEIFKAAVETIEREVDLDREK
ILIIGGDGWHPGVIGIVASKLMEKYYRPVILISFDGEEGKGSGRSVFGFN
LFEALKAVKDYLTHFGGHERAVGVGVLKSRFLEFKEALLAYAEKHLPDEL
LLPKIEVEEVVGENDLNLKISDEIALFAPFGEQNPEPLFLIKGGQIRGAQ
AVGKNGNHLKFNVKLNREIFSSIAFSKGDYLEFVYQQNEVDLAFIPKPNR
FNGKTELQLNVKEIAPGEGRIFKVKKIKEKELNTIEEELSLLAKPYCYKF
ANHPEKVSFARRINKLNQREFSFIKLAGTKKTLVVTANLAEMYGQALELW
ENGFTLLPYCPELRETFKEKALKKYRETGILLTSEQYLPEALNFTFEQII
FTTPPLLLDVTIPLLTDYSGSLGVLANKEDLKILYLRLVRILPQRDKIAK
VYMALRQKLLTGNPFTFSEKELFFNAFGDEMRVKDDYLLLISILKVLTEL
NLIKIWEEDGKKWVFLFPPSQDKINLEISSTYARAKEYEQNLREYFKVFY
PDVL
>CHY_1980 recN, DNA repair protein RecN
MLLALTVENFGLIERVNMEFTPGLNVLTGETGAGKSMLIDALLLLLGQKA
RGDMVRKGTGKALLTATFESEKLCRKLREYGLPADEVNIFSREITADGKS
VARINGTVVPLTLYREVTLGLIDVMTQHEQQMLLAPSYHLKLLDRTGNEE
FQRWCKQLKEAYEAWVEAEKQYEEITSQEMERLKRIDYLKFCINEIEKIN
PSFEEEEQLKLLHNRLLNQEKLYGLIGNAYREIYGENEPGIVDRLGRIIK
DLKEAARFDAFTEEISKKVEEATLLLEEAALDLKTYLDDMENQSVNPDEV
EERLYRYELLKKKYGPTLKDVLNFLEKARQEYQNLSEIEENKAFYQEKAV
KLRENYYKINSLVKEYRRKLAVKLEESIAQHLRELLMPHAQIKVVFTDAS
PGPRGDEAIQFYFLPNPGEDLKPLARIASGGELSRLLLSFKLYFNQVDEH
ETLIFDEIESGLGGSIIEVVGEKLKKLSSNHQVLLVTHSPIIAGFADTHF
VVEKIVSEERTETRVKKLTFEERKWEIARMLGEKEIEALNLEMAEKILKK
GK
>CHY_2673 recR, recombination protein RecR
MYFAEPVAKLIEHLAKLPGIGPKTAQKLALYLLEIPEEEARALAEAIITA
RKNTRYCSICFNLTDTDPCAICRNPGRNHRLLMVVEEAKDVAAMERTGSF
NGIYHVLHGVLSPIKGIGPEDLKVRELLLRLSREPVEEIIIATNPTVEGE
ATAMYLASLLKPLNFKVTRIAHGLPVGSDIEYADELTIRKALEGRRVLE
>CHY_2186 rexA, exonuclease RexA
MKNWTAEQMRAITSRGNALLVSAAAGAGKTSVLVERVLSRVLTDTPPVDI
DRLLVVTFTEAAAGEMKERLGTELLKRLNEDPGNSRILEQLELLPVADIS
TLHSFCHKIIRKYGRVCGYETKFAILEGPRETYLKNKVLEEILEERYEKG
DRELFALLEYLNDEKNDRNLKELILNLYHFSRSNPEPEKWLLDSLNLFNG
NWERFEDTFWYREIKSSTEMWLEYILELLGRAKSVAEKYGQARAFSLLAE
DMEKVRGLYAKLNEGYEAAKQYLSQVKFGTFSWGRGVGGKDEAKDLRDKA
KEQFETIKKRYFSWEAGNFREELRTLTSYLDPLVKLVREFSRKYQEEKRK
HGFADFSDLEHWALDILKSGVYRELREKYVEILVDEYQDINGLQEEILTY
VSRDGQNLFMVGDVKQSIYRFRWARPEIFLKKYEDFTDEKKIELSLNFRS
REEIIATVNFIFKQIMKKRVAELSYDEKAFLKKGADYLPNANCFAELHLI
EGKPEEDINSNGEPEEDLTAVHREARLVAAKILKLKEEGFKVFDRETKEF
RPLQYRDIVILSRSLSNSSNIWQEELTRAGIPVYVEGAGSFLNSKEILLM
TSFLKVIDNPCQDVPLAAVLCSPVAGLTYEELWQVRKEYPEGLLYDALKN
KSLGKDELSVKSQKFLELLVEFQKLSRQISLAELVNEIYRKTNLPEIFGA
YPGGEVRQANLKLLHDLAVDFAEINGGGIYNFLTFLSQAAESEDFSPAKL
IGEADDVVRVMSVHKSKGLEFPVVFVVGLGKRFKFDYSNTVFLHSDLGFG
PKFFDPEKRIRRHSIASQILSERMRRETLAEEMRILYVALTRAREKLILV
GTVKNLAKKMAGWQSQTEALKDTLSDGQIARAGNFLDWIGPVVFREGSDL
PDCLKVEVHPQQEKIEGEQWELPEVLRVKLLTKTPFTEETDYTGQFRAGL
EFNYPGLKIAKLPAKMSVSDLKEVFSTDDVISLEDEDEVFLPGVYFEDGA
MLGIVYHEFLRRIDFQGDLSASGLKAQGETLVAEGVLPPESREMLDFTKI
ARIFATPLGQRILRAREIYPEFPFTLGVKAGEIYPEATGFSEKILVRGVI
DLLALEEDGFFIVDWKTDRVTGDILNERLKEYAGQLNLYARAVEEITGKK
VKEKYLYFINLEKEVRV
>CHY_2187 rexB, exonuclease RexB
MLTIVRGPVGSGKSRYCREEIIKVLKEAPLGPMVLYIVPESATFENEYLL
NTREDLPGSFRLQVLSFSRLALNVVREFKAFFKNSSEFVYQHTLKKILQE
NKGKLQILQKAADNPGFIEDLLKLFKEFRRYRVKPENLEKASSEIENWML
QQKLKDVYLLYKLYLEKFGEEYTSEGLLEKFLEYAPKSKFLAGAKVFIDG
FYTFTPLELEVIKTLLKTCAEVTVTLPTEYDPGIFNRLYSEALNLGIKVK
ELKLEKIERYRASELLHLAQNYYPLLPDPYSGSLENLSLIAAANPLEEME
KAARIIRYLAKFKGYKLSDILVLIPEDGYYISNIKTVFNEYGLPVYVDKG
LAFDHHGLYFLLKGVLGEFNREAAINCLKSGLLNLTADEVFALENYLLSR
GLDGEKLVLKEAWEDPNSSYWESWEKGFGEIISFSQILPLINTYREFSQS
LKQLLLKIGVPRRISDENGERFWQAFTNLLTEIEEVFGAERLNPTTFAEE
LLAYLAKLSLKTIPKGLDQVRAGGSKRYWTGEARAVIILGAVEGKFPSPP
AAGLIFTEEERAKLKKVGLELSPLIRQRLKEDNFHVFLALTRARERVYVS
YPRVSLTGESFTPALLVDWLKKAFPNLKSEEGSYGNETTPQALTRLLSRE
MVKVKKNGELPFIAQGAFNALLLSKPELITKIARAFATNPGKIKLNAGFK
EFLPSKTLSVSRLETYYSCPLKYFLKYLIKAEEREIFTPEATEIGALLHG
AVAEIIKTVREKGQKLSTLLAEDLKTLVYQAFTKAQQEYGEKFLATYRGR
YFLNRLYLMLFKAIEALAYFEGFTKFTPFGEEIAFGEKERLKSPVFEVNG
EKYTLAGKIDRIDVYENNGKTYLRIIDYKTGSISISLDEVVGGINLQLLT
YLLVASENKELFGENLVPAGAFYFRFQNPMLDEKAEGLSMEELKEEVYKN
FRLSGYALKDEESLKHLDSFYAQNNKFKTVNLRTYKDGRIDNALTPAELE
ALFTKIKGLITEAIFKISAGEFSAIPYQLKDATGCRYCSYLEVCRLEEQE
KQYRVIPRKKDPEVLLALSGGGVGDEKLDSRTNAGYHLQG
>CHY_0852 rnhA, ribonuclease HI
MKYKVHIDGGSRGNPGPAASAMVIYDENGEVLYEKSKYLGITTNNVAEWE
ALKGAFLALTFLAQKHGKVEAEIFADSELMVKQFNGQYKVRDEKLKEIYA
EVKKLAANPALKVTLSHVYRENNKAADRLVNLELDRQENANIDSEIIE
>CHY_1426 rnhB, ribonuclease HII
MQGKFDKIANITLVMKTLDNNLPFNLQIENQLFSSGYELVAGGDEAGRGP
VAGPVVAAIVVIKPGIYIPEVDDSKKLSSKKREKLFEEIINLVTDWSVAV
VGPDLIDRLNIYQATKFAFKAALDSLSIKPEALILDALKLTGFSGKQVSM
VKADEISFAVACASILAKVIRDKIMEQYDKDFPGYGFKKNKGYLTREHRE
ALELLGPSPIHRKSFEPIKSFYGQLKLFEKV
>CHY_1523 ruvA, Holliday junction DNA helicase RuvA
MIAVLKGKVLDKTLDSVVVDVNGIGFKVAVLPRELGSLNLNSEVVMYTSL
QVREDGWFLYGFSDEETRKFFDLLLSVSGIGPKAALAILNEFTPEKLNWV
IANKDEKALTKVPGVGKKNAQRLFLELKDKIGYTSFTSNEESVENFQDLW
GDVYKGLLSLGLSAAEAREILGKIDKKSVKTPEEGIALALRFLNK
>CHY_1522 ruvB, Holliday junction DNA helicase RuvB
MEERLVSGYELTEDENEFSLRPRRLSEYIGQQKVKETISIFIEAAKKRNE
ALDHVLLFGPPGLGKTTLATIIANELGVDIKITSGPALERPGDLAAILTN
LGEKDVLFIDEIHRLPRIVEEVLYSAMEDFALDIMLGKGPGARSLRLSLP
KFTLIGATTRAGLLTSPLRDRFGMVHRLEFYSVEELMLIINRSAALLKTE
ITPEGSFEIAKRSRGTPRIANRLLKRVRDYAEVRSSGVINLENAKAALDL
LEIDELGLDPTDRLILKTMIEKYQGGPVGIEAIAAAISEEVDTIEDVYEP
FLLQIGFIKRTPRGRVVTKLAYDHLGIAYNKNAGELSLW
>CHY_1524 ruvC, crossover junction endodeoxyribonuclease RuvC
MKIIGIDPGTAIVGVGVLEKKNGKLIVKNFQAITTPPIAKEKRLKIIFQK
LNEILIQEKPEIVVVEELFFSKNVKTAISVGEARGVVLLASALNDIPVLE
LKPVEVKTIVTGYGHAPKSQVEYMIAKLLGLKTPPKPDDVADALAIAYAG
FLKMGGLL
>CHY_1794 topA, DNA topoisomerase I
MKKLVIVESPAKAKTIGKFLGKEYVVKASMGHIRDLPTYRFGVNIEKDFA
PTYEIIRGKKELIKELKEEAAKAEKVYIASDPDREGEAIAWHVKEVLDLE
DNGDLRIEFNEITKDAVLQAIANPRGIDYNRVYAQQARRILDRIVGYKLS
PLLWRKIKKGLSAGRVQSVAVRLICEREEEIEKFVPEEYWSLTAHLEAEK
KPFKAKLSKYQNRKIEIKNKDEVERIIAEVSQRDFKVVKITKKLTKKSAP
EPFITSTLQQEASKRLNFSAKKTMQIAQALYEGLEIGEYGVTGLVTYIRT
DSTRVAEEAKAKAAAYIKNTFGEEYVGTEKKTKAPKGKIQDAHEAIRPTD
IEKDPEKIKQYLTPDQYKLYKLIWERFVASQMSDAQYDVTTVDIEAGDYL
FRATGSILRFPGFTKIYQVEEEEGEKEEKEKLPALMEGQSLTLLKLEPKQ
HFTEPPPRYTEATLIKALEEKGIGRPSTYAPILETILKRGYVEKDKKQLK
PTELGRIVVDLLKEHFPDIIDVEFTAEMEEKLDQIEEGEKNWIEVLRNFY
EPFNETLRQSYEKIEKIILPLEETEEKCPNCGRNLVVRTSRFGKFLACPG
YPECKFIKPFVQKTGATCPRCGGEIIVKKSKKGRVFYGCSNYPSCDFVSW
DLPSSKKCPNCQSVMVEKRPKKKPPYLLCTNPDCKHTEPLEEVQ
>CHY_0259 uvrA, excinuclease ABC, A subunit
MDKIVIKGARVHNLKNIDLTLPRNKFIVITGVSGSGKSSLAFDTIYAEGQ
RRYVESLSAYARQFLGQMDKPDVDFIEGLSPAISIDQKTTSKNPRSTVGT
VTEIHDYLRLLYARIGIPHCPVCGRVVEKQTIDQMVDRLLALPERTKLVI
MAPIVRGRKGEFVKTLEDIRRQGFARVRVDGILYDLAEDIKLEKNKKHNI
DVVVDRLVVKDGIKTRLYDSLETALKLTEGLAVVEVVDGEEITFSENFAC
PHCEISLPEISPRLFSFNNPFGACPECTGLGYKLEVDPDLVIPDKDLTLR
QGAIAAWNAGNMQAYYFQVLEALAKKYRFSLDVPVKELEPEILRIILYGL
PGEKVRVRYYNYTNGNSYTFDANWEGVIPNLERRYRETQSEAVREEIEKF
MTQRKCPSCQGARLKKEALAVTVGGKNIHELGEMTVEKLLAFLENLELTE
REFLIARQVLKEIKERLGFLNNVGLDYLTLNRSATTLSGGEAQRIRLATQ
IGSGLTGVLYVLDEPSIGLHPRDTKRLLDTLKRLRDLGNTLIVVEHDEET
IREADFIVDMGPGAGEKGGQVVAAGTLEEVLKHPDSITAKYLRGEEKIPV
PLFRRSGNGKTITIVGARENNLKNITVEIPLGKFVAVTGVSGSGKSTLIN
EILYKAVAGKFYKLKEKPGAHDEILGLTYIDKIINIDQSPIGRTPRSNPA
TYTGVFNDIRELFAATPEARMRGYKPGRFSFNVKGGRCEACEGDGIIKIE
MHFLPDVYVPCEVCKGARYNRETLEVRYKGKNIAEVLDMTVEEALEFFSA
IPRIQRKLQTLYDVGLGYIRLGQPATTLSGGEAQRVKLATELSRRSTGKT
LYILDEPTTGLHIADVHRLLDVLNRLVEAGNTVVVIEHNLDVIKTADWII
DLGPEGGDKGGQVVAEGTPEEVARNPASYTGKFLRPYLNL
>CHY_0258 uvrB, excinuclease ABC, B subunit
MERFLLKANYTPKGDQPKAIKELTEGIEKGLKMQTLLGVTGSGKTFTMAN
VIANVNKPTLVIAPNKTLAAQLCAEFREFFPENAVEYFVSYYDYYQPEAY
LPATDTYIEKDSAINDEIDKLRHSATAALFERRDVIIVASVSCIYGLGDP
QEYRELLLSVRKGQIYEREAILRKLVDIQYERNEYDLTRGKFRVRGDVIE
VFPASYTDRAVRIELFGDEVDRILEFDTLTGEIIGELKHVAIFPASHFAT
SKEKLERAIKSIEEELEERLRYFEERGKLLEAQRLKQRTLYDIEMLREVG
YTKGIENYSRHLTGRKPGEPPYTLIDYFPKDFLMIIDESHITIPQIRGMY
EGDRSRKEALVEYGFRLPSAFDNRPLKFHEFEARINQVVFVSATPGPYEL
KHSQKIVEQIIRPTGLVDPEVEVRPTRGQVDDLYGEIKERVARNERVLVT
TLTKKMAEDLTEYFREMGVKVRYLHSDIDTLERVEILRDLRLGVFDVLVG
INLLREGLDLPEVSLVAILDADKEGYLRSERSLIQTIGRAARNVNGKVIM
YADTVTASMQKAIDETNRRRKLQMEYNRKHGITPQTVQKAVRDVIEATRA
VTAELPEVKRDFIQKMSAKEFKQYVEKLTREMKEAAKALEFEKAAMLRDL
IIELRAQKAVKK
>CHY_0267 uvrC, excinuclease ABC, C subunit
MTLWEKVKNLPDSPGVYLYKDEKGEVIYVGKAKNLKNRVRSYFQPPEKLL
PKTRVMMEKARDIEVIITSTEVEALILEQNLIKRYRPRYNILLKDDKSYP
YLKITGEEFPRLLITRRVVNDGGRYFGPYPDAGALNETYKLLRSIFKFRT
CTPTIFAQKKRPCLNFHIKKCSAPCAGEISREEYFKEIEMVVDFLEGRGE
NLIKKLKKEMAIASDNLEFERAAKLRDQILALEKILAKQKISRGQRNADV
VVVANRENLGVGLIFVIRQGNLLGQKVYTFTGEMETGELLNQVLVTHYGE
AKEVPVEIILSTRENLDEEFLNSWFELKFGKKPKFTVPKRGEKFELLKMA
LENVNFTLDEKIKLNEKKQLLNEKALMDLKEALNLPVVPRRIEGYDISHL
AGTGTVASMVVFIDGEPVKGKYRRFAIRSAANDDYTAMFEAVLRRFKKYL
ALQEEGGADGSFEELPDLVLIDGGKGQLNAAMDALKETNLLGKFTVIALA
KEQEEIFLPGKKDSLLLTQDREGLKLLQRVRDEAHRFARGYQEKKRVKTL
ASLLEQVEGIGPKRRKQLLNKFGSIKNLREATVEEITAVPGITREIAERL
KELLEME
>CHY_1792 xerC, tyrosine recombinase XerC
MAEELKAFLNYLLLERNYSPNTIAAYERDILDFQEFLQGKSFLSVNEVDL
KQFLVDILRKNRSRRTAARKMVALRSFYRFLKRCGFIKENPALSLEIPKI
PKTLPEVLTVDEVFKVIEGQENSTPTGLRNRALLELFYGAGLRIGEIAGL
TLNDLDLTQGYVRVTGKGRRQRIVPLGKYALDSLKLYLEAGRPAFKPKSE
KLFLNQQGAGLTVRGIRYLISQIVKKAGLNRKITPHTFRHSYATHLLEGG
ADIRAVQELLGHKRLSTTEIYTHLSKERLREVYLRTHPRSREEKNDV
>CHY_1964 xerD, tyrosine recombinase XerD
MLDLFIDYLLLEKGFSLNTLLSYRRDLEKFVSFLEKRNISIIDATSKDIK
LYLQDLARKLKPASVARNLAAIRSFYKYLLREKIVGENPALDVDGPKLGL
KLPEILSYEEIDLLLKAPDLSTWEGVRDRAMLELLYATGLRVSELVNLEL
PNLYLDERYVKILGKGAKMRIVPFGEVAAHYLNQYLALRAKRKSNSLKLF
ITRKGSGFTRQGFWKMLKRYGQKAGIVKNLTPHLIRHSFATHLLENGADL
RIVQELLGHSFIETTQIYTHLTTRKLREVFRKAHPRA
>CHY_1990 xseA, exodeoxyribonuclease VII, large subunit
MALFIVTVSELTDYIAEKFEKDDWLNQVAVEGELSNCKFSQGHLYFTLKD
ERAELKGVMYKGRASALPFIPQDGQKVIVFGQVAVYKKRGIYQIYAEMIE
PLGIGALYLKFEQTKEKLRDKGYFAEERKKKLPRYPEKIGIVTSKNGAAI
RDILTTIKKRWPKATLYLVPVAVQGDEAPGQIVKALNLLNRYKLCEVIIL
ARGGGSFEELAAFNEETVADAIYASNIPVVTGIGHETDTSIADMVADRRA
PTPTGAAVEATPNLVEIWNNLREQRQKMVKALANYFQREQKNLEFQERRI
LRAYEKLITDKSREVTEGLERLLRSFKTTFQQEKNRLSLLKEKLILLSPY
LRHKQQKEKLEELKERLFLRCAELLKRNQAVLIQQSLRLRTSVKNLVLQK
NLVLSSYEERLKLLNPLKILNRGYAVVFDFEGRVVTSVNNLPERFKIKFS
DGEALAKALGKNIIEGDKNDDL
>CHY_1989 xseB, exodeoxyribonuclease VII, small subunit
MTFEEAMNRLNEIVERLERGNVGLEESLALFEEGLKLHRFCSEKLKELEL
KLVEVQEDEAGEVTFEEIVEMEDDLPF