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2024-05-05 13:59:06

Gene list

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COG category: Replication, recombination and repair
Organism: Nitrosococcus oceani ATCC 19707, ATCC 19707

Number of genes found: 205

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Nitrosococcus oceani ATCC 19707, ATCC 19707
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Noc_1598 chromosome pseudo1777501 525 - 0.474286
NA Noc_1184 Transposase, IS605 OrfBchromosome CDS1291596 972 + 0.550412
NA Noc_0966 hypothetical proteinchromosome CDS1067483 447 + 0.548098
NA Noc_0442 Transposasechromosome CDS478400 1155 - 0.554978
NA Noc_0044 DNA primasechromosome CDS41378 1725 + 0.496812
NA Noc_0071 putative transposase gene of IS630 family insertion sequence ISY100hchromosome CDS73299 525 + 0.472381
NA Noc_1413 ATP-dependent DNA ligasechromosome CDS1567612 1116 + 0.47491
NA Noc_0138 Crossover junction endodeoxyribonuclease RuvCchromosome CDS150942 525 + 0.533333
NA Noc_1049 Helix-turn-helix, Fis-typechromosome CDS1156596 327 - 0.489297
NA Noc_1856 Protein of unknown function DUF1568chromosome CDS2108821 1113 - 0.596586
NA Noc_0171 DNA gyrase, subunit Achromosome CDS188607 2541 + 0.507281
NA Noc_3024 Transposasechromosome CDS3421300 336 + 0.529762
NA Noc_2256 Methylated-DNA-(protein)-cysteineS-methyltransfe rasechromosome CDS2604202 477 - 0.501048
NA Noc_0861 Transposasechromosome CDS943053 336 - 0.529762
NA Noc_0063 Type III restriction enzyme, res subunitchromosome CDS64658 2889 + 0.606438
NA Noc_0236 DNA repair protein RadCchromosome CDS260116 675 - 0.562963
NA Noc_2022 Ribonuclease Hchromosome CDS2334508 606 - 0.561056
NA Noc_2902 Transposasechromosome CDS3281342 1224 - 0.543301
NA Noc_1693 DNA ligase (NAD+)chromosome CDS1892547 2028 - 0.483728
NA Noc_0078 Excinuclease ABC, A subunitchromosome CDS79413 5604 - 0.553533
NA Noc_0599 UvrD/REP helicasechromosome CDS644991 2154 - 0.532033
NA Noc_2104 Methylated-DNA-(protein)-cysteineS-methyltransfe rasechromosome CDS2419741 636 + 0.534591
NA Noc_1520 Transposasechromosome CDS1685310 1182 + 0.562606
NA Noc_0002 DNA-directed DNA polymerasechromosome CDS2396 1104 + 0.395833
NA Noc_1905 hypothetical proteinchromosome CDS2176947 1311 + 0.459954
NA Noc_0546 probable predicted DNA methylase containing a Zn-ribbonchromosome CDS586862 3012 - 0.592961
NA Noc_0612 Exodeoxyribonuclease VIIchromosome CDS658835 1359 - 0.540839
NA Noc_0696 Resolvase-likechromosome CDS751599 573 - 0.593368
NA Noc_0615 Phage integrasechromosome CDS663624 1200 + 0.53
NA Noc_1331 Helix-turn-helix, Fis-typechromosome CDS1481294 312 + 0.442308
NA Noc_0800 conserved hypothetical proteinchromosome CDS873039 774 + 0.492248
NA Noc_2648 DNA-formamidopyrimidine glycosylasechromosome CDS3001673 816 + 0.501225
NA Noc_2198 Transposase, IS605 OrfBchromosome CDS2541892 1107 - 0.551039
NA Noc_0385 putative transposase gene of IS630 family insertion sequence ISY100hchromosome CDS426788 525 - 0.474286
NA Noc_0001 chromosomal replication initiator protein, DnaAchromosome CDS175 1350 + 0.431852
NA Noc_0325 putative transposase gene of IS630 family insertion sequence ISY100hchromosome CDS353344 525 + 0.474286
NA Noc_1464 Micrococcal nuclease (SNase-like)chromosome CDS1620752 453 - 0.556291
NA Noc_1946 Transposase IS200-likechromosome CDS2231107 324 + 0.466049
NA Noc_0657 Transposasechromosome CDS711606 333 + 0.528529
NA Noc_0386 Transposasechromosome CDS427287 336 - 0.529762
NA Noc_1986 hypothetical proteinchromosome CDS2282537 129 - 0.496124
NA Noc_0986 hypothetical proteinchromosome CDS1088414 573 + 0.478185
NA Noc_0076 DNA helicase IIchromosome CDS75986 1899 - 0.603476
NA Noc_1915 hypothetical proteinchromosome CDS2192860 897 + 0.42029
NA Noc_0046 Phage integrasechromosome CDS45851 756 + 0.511905
NA Noc_0703 Exonuclease SbcDchromosome CDS755058 1257 + 0.556086
NA Noc_0288 DNA polymerase III chi subunit, HolCchromosome CDS315513 432 - 0.483796
NA Noc_2211 Transposase, IS605 OrfBchromosome CDS2554495 1116 - 0.574373
NA Noc_2663 DNA polymerase III, delta subunitchromosome CDS3017506 1035 - 0.536232
NA Noc_1587 Transposasechromosome CDS1767730 1092 + 0.494505
NA Noc_0355 Protein of unknown function UPF0102chromosome CDS388386 375 - 0.528
NA Noc_0877 Transposasechromosome CDS959409 336 - 0.529762
NA Noc_0768 Protein of unknown function DUF1568chromosome CDS836354 528 + 0.549242
NA Noc_1772 Histone-like DNA-binding proteinchromosome CDS1997321 273 - 0.512821
NA Noc_0070 Transposasechromosome CDS72989 336 + 0.526786
NA Noc_0324 Transposasechromosome CDS353034 336 + 0.529762
NA Noc_1585 DNA mismatch repair protein MutS-likechromosome CDS1765038 1644 + 0.424574
NA Noc_3021 Excinuclease ABC, A subunitchromosome CDS3416327 2862 - 0.547869
NA Noc_2052 putative transposase gene of IS630 family insertion sequence ISY100hchromosome CDS2360799 525 + 0.474286
NA Noc_1366 Transposasechromosome CDS1513748 1212 + 0.576733
NA Noc_0638 Integrase, catalytic regionchromosome CDS683965 819 + 0.557998
NA Noc_0784 hypothetical proteinchromosome CDS857324 759 + 0.483531
NA Noc_2196 Adenine-specific DNA methylase containing a Zn-ribbon-likechromosome CDS2539132 2244 + 0.551248
NA Noc_2255 Tyrosine recombinase XerDchromosome CDS2603288 918 - 0.518519
NA Noc_0344 DNA adenine methylasechromosome CDS375996 834 - 0.479616
NA Noc_1505 Transposasechromosome CDS1669980 1179 + 0.571671
NA Noc_2751 Protein of unknown function DUF48chromosome CDS3122731 888 - 0.545045
NA Noc_2873 putative transposase gene of IS630 family insertion sequence ISY100hchromosome CDS3254884 498 - 0.46988
NA Noc_1216 ATP-dependent DNA helicase RecGchromosome CDS1329485 2139 + 0.558672
NA Noc_2582 DEAD/DEAH box helicase-likechromosome CDS2935489 1296 - 0.469136
NA Noc_2036 Exonuclease VII, small subunitchromosome CDS2347720 234 + 0.457265
NA Noc_1218 Micrococcal nuclease (SNase-like)chromosome CDS1332553 855 + 0.536842
NA Noc_1794 putative transposase gene of IS630 family insertion sequence ISY100hchromosome CDS2023272 525 + 0.474286
NA Noc_0053 toprim domain-containing proteinchromosome CDS50043 1806 + 0.57309
NA Noc_0073 putative transposasechromosome CDS74779 381 + 0.498688
NA Noc_1594 Transposasechromosome CDS1774080 1182 + 0.558376
NA Noc_1139 Excinuclease ABC, B subunitchromosome CDS1245998 2064 + 0.515504
NA Noc_1093 Transposasechromosome CDS1199513 1194 + 0.550251
NA Noc_0140 Holliday junction DNA helicase RuvBchromosome CDS152065 1047 + 0.522445
NA Noc_1057 hypothetical proteinchromosome CDS1163559 462 - 0.482684
NA Noc_0919 MutS 1 proteinchromosome CDS1010149 2592 - 0.534336
NA Noc_0018 RecF proteinchromosome CDS11319 1092 + 0.42033
NA Noc_0209 Exodeoxyribonuclease III xthchromosome CDS232882 714 + 0.463585
NA Noc_2043 conserved hypothetical proteinchromosome CDS2353146 393 - 0.534351
NA Noc_0957 Transposasechromosome CDS1057179 336 + 0.529762
NA Noc_2219 hypothetical proteinchromosome CDS2563476 309 + 0.527508
NA Noc_0690 hypothetical proteinchromosome CDS746135 282 + 0.539007
NA Noc_1659 DNA-directed DNA polymerasechromosome CDS1853043 1014 - 0.415187
NA Noc_0993 hypothetical proteinchromosome CDS1100150 519 - 0.491329
NA Noc_2593 DNA-directed DNA polymerasechromosome CDS2948230 1590 + 0.496226
NA Noc_0958 putative transposase gene of IS630 family insertion sequence ISY100hchromosome CDS1057489 525 + 0.474286
NA Noc_2403 possible transposasechromosome CDS2752004 435 - 0.583908
NA Noc_1199 Transposase, IS605 OrfBchromosome CDS1305832 1233 + 0.549878
NA Noc_1415 NUDIX hydrolasechromosome CDS1569432 456 + 0.517544
NA Noc_2966 Histone-like DNA-binding proteinchromosome CDS3353309 285 - 0.463158
NA Noc_0656 helicase, DEAD/DEAH box familychromosome CDS709314 2283 - 0.537013
NA Noc_2218 Transposasechromosome CDS2562080 1179 + 0.560645
NA Noc_1085 Phage SPO1 DNA polymerase-related proteinchromosome CDS1191065 570 - 0.519298
NA Noc_2874 Transposasechromosome CDS3255383 336 - 0.529762
NA Noc_0181 Integration host factor, beta subunitchromosome CDS201338 342 + 0.51462
NA Noc_0924 DNA recombination protein, RecAchromosome CDS1019737 1029 + 0.538387
NA Noc_0554 DNA polymerase Achromosome CDS597587 2712 - 0.524336
NA Noc_0876 putative transposase gene of IS630 family insertion sequence ISY100hchromosome CDS958910 525 - 0.474286
NA Noc_0049 putative transposase gene of IS630 family insertion sequence ISY100hchromosome CDS47706 525 + 0.474286
NA Noc_1642 Transcription-repair coupling factorchromosome CDS1833219 3477 - 0.50302
NA Noc_2595 RecR proteinchromosome CDS2950227 600 + 0.526667
NA Noc_1034 hypothetical proteinchromosome CDS1144447 282 + 0.425532
NA Noc_3023 Single-strand binding proteinchromosome CDS3420694 492 + 0.552846
NA Noc_3012 SMF proteinchromosome CDS3405155 1107 - 0.539295
NA Noc_1615 Transposasechromosome CDS1803938 312 - 0.445513
NA Noc_2475 Histone-like DNA-binding proteinchromosome CDS2819649 330 - 0.463636
NA Noc_0019 DNA gyrase, B subunitchromosome CDS12438 2424 + 0.440594
NA Noc_2543 Transposasechromosome CDS2892366 1173 - 0.561807
NA Noc_1398 putative transposasechromosome CDS1549012 360 + 0.569444
NA Noc_1191 DNA repair protein RecNchromosome CDS1299057 1680 + 0.549405
NA Noc_1309 Transposasechromosome CDS1454930 1284 - 0.561526
NA Noc_0929 putative integrase DNA proteinchromosome CDS1027217 129 - 0.542636
NA Noc_0637 Transposase IS3/IS911chromosome CDS683663 267 + 0.498127
NA Noc_0636 Exonucleasechromosome CDS682483 618 + 0.482201
NA Noc_1289 putative transposase gene of IS630 family insertion sequence ISY100hchromosome CDS1428083 525 - 0.474286
NA Noc_2928 Site-specific DNA-methyltransferase (adenine-specific)chromosome CDS3312717 1875 - 0.445333
NA Noc_2815 Ribonuclease Hchromosome CDS3191535 444 - 0.565315
NA Noc_0028 Primosomal protein nchromosome CDS25794 2211 - 0.50882
NA Noc_0649 DNA topoisomerase Ichromosome CDS697637 804 - 0.526119
NA Noc_2240 Phage integrasechromosome CDS2586716 1221 + 0.565111
NA Noc_0544 conserved hypothetical proteinchromosome CDS583366 666 - 0.533033
NA Noc_1565 phage integrasechromosome CDS1740221 345 - 0.550725
NA Noc_0318 Tyrosine recombinase XerCchromosome CDS343746 903 + 0.527132
NA Noc_0545 Helicase-likechromosome CDS584133 2733 - 0.622393
NA Noc_0701 Transposasechromosome CDS754135 336 + 0.529762
NA Noc_0659 DEAD/DEAH box helicase familychromosome CDS712450 1323 - 0.54195
NA Noc_0079 DNA-3-methyladenine glycosylase IIchromosome CDS85072 606 - 0.635314
NA Noc_0680 hypothetical proteinchromosome CDS736290 333 + 0.45045
NA Noc_0388 Transposase (probable), IS891/IS1136/IS1341chromosome CDS428172 1122 + 0.575758
NA Noc_2749 NUDIX hydrolasechromosome CDS3118353 858 + 0.530303
NA Noc_0995 Helicase RecD/TraAchromosome CDS1101776 2184 - 0.517399
NA Noc_1501 Transposasechromosome CDS1664860 1194 + 0.549414
NA Noc_3010 DNA topoisomerasechromosome CDS3402223 2352 - 0.497874
NA Noc_2740 conserved hypothetical proteinchromosome CDS3109372 453 - 0.379691
NA Noc_0794 Recombination protein O, RecOchromosome CDS867342 741 + 0.539811
NA Noc_0017 putative transposase gene of IS630 family insertion sequence ISY100e (ISS1987)chromosome CDS10544 558 - 0.523297
NA Noc_1644 Excinuclease ABC, C subunitchromosome CDS1838148 1800 - 0.406111
NA Noc_1882 putative transposasechromosome CDS2143103 414 + 0.509662
NA Noc_0702 putative transposase gene of IS630 family insertion sequence ISY100hchromosome CDS754445 525 + 0.474286
NA Noc_2018 NUDIX hydrolasechromosome CDS2328980 546 + 0.479853
NA Noc_0367 Holliday junction resolvase YqgFchromosome CDS400408 459 - 0.522876
NA Noc_0860 putative transposase gene of IS630 family insertion sequence ISY100hchromosome CDS942554 525 - 0.474286
NA Noc_0401 Transposasechromosome CDS444098 1209 + 0.493797
NA Noc_0664 TatD-related deoxyribonucleasechromosome CDS719001 729 + 0.533608
NA Noc_2512 NUDIX hydrolasechromosome CDS2860873 519 + 0.537572
NA Noc_0987 conserved hypothetical proteinchromosome CDS1089044 2736 + 0.528509
NA Noc_1146 Integration host factor, alpha subunitchromosome CDS1254925 300 + 0.476667
NA Noc_0687 Phage integrasechromosome CDS743776 933 + 0.592712
NA Noc_1698 Phage integrasechromosome CDS1900800 987 - 0.54306
NA Noc_1189 RecJ exonucleasechromosome CDS1296443 1725 + 0.535072
NA Noc_1441 hypothetical proteinchromosome CDS1597838 936 + 0.461538
NA Noc_2282 Gram negative topoisomerase IV, subunit Achromosome CDS2633201 2244 - 0.520053
NA Noc_0193 NUDIX hydrolasechromosome CDS211316 411 + 0.537713
NA Noc_0625 DNA repair protein RadCchromosome CDS672892 516 + 0.52907
NA Noc_2002 UvrD/REP helicasechromosome CDS2308232 2007 - 0.528151
NA Noc_2283 Gram negative topoisomerase IV, subunit Bchromosome CDS2635441 1887 - 0.520933
NA Noc_1290 Transposasechromosome CDS1428582 336 - 0.529762
NA Noc_0139 DNA recombination protein, RuvAchromosome CDS151463 600 + 0.551667
NA Noc_0336 DNA mismatch repair proteinchromosome CDS365383 1752 - 0.534817
NA Noc_2996 hypothetical proteinchromosome CDS3389831 696 - 0.45977
NA Noc_0920 Superfamily I DNA and RNA helicases and helicase subunits-likechromosome CDS1013198 4869 - 0.519819
NA Noc_0074 putative transposasechromosome CDS75203 423 + 0.470449
NA Noc_0658 putative transposase gene of IS630 family insertion sequence ISY100hchromosome CDS711940 498 + 0.46988
NA Noc_0419 DNA methylase N-4/N-6chromosome CDS458787 717 - 0.499303
NA Noc_1367 conserved hypothetical proteinchromosome CDS1515195 2241 + 0.499331
NA Noc_2420 NUDIX hydrolasechromosome CDS2767954 555 - 0.518919
NA Noc_0059 hypothetical proteinchromosome CDS59989 2844 + 0.509494
NA Noc_1500 Transposase IS200-likechromosome CDS1664390 414 - 0.545894
NA Noc_2686 Transposasechromosome CDS3041767 1119 + 0.504915
NA Noc_3025 putative transposase gene of IS630 family insertion sequence ISY100hchromosome CDS3421610 525 + 0.474286
NA Noc_1991 Transposasechromosome CDS2289608 1152 + 0.5625
NA Noc_1931 Conserved hypothetical protein 95chromosome CDS2208457 606 - 0.523102
NA Noc_1335 hypothetical proteinchromosome CDS1483121 309 + 0.469256
NA Noc_0655 Protein of unknown function DUF1156chromosome CDS706395 2910 - 0.508591
NA Noc_0387 Transposase IS200-likechromosome CDS427761 411 + 0.49635
NA Noc_2814 DNA polymerase III, epsilon subunitchromosome CDS3190804 732 - 0.498634
NA Noc_2051 Transposasechromosome CDS2360489 336 + 0.529762
NA Noc_1169 Endonuclease III/Nthchromosome CDS1278893 711 - 0.50211
NA Noc_2267 A/G-specific adenine glycosylase MutYchromosome CDS2615063 1065 + 0.580282
NA Noc_0704 ATP-dependent dsDNA exonuclease (SbcC)chromosome CDS756326 3276 + 0.540293
NA Noc_1793 Transposasechromosome CDS2022962 336 + 0.529762
NA Noc_1301 ATP-dependent helicase HrpAchromosome CDS1441033 3846 - 0.516641
NA Noc_2831 DNA mismatch repair enzyme MutHchromosome CDS3208786 678 - 0.545723
NA Noc_2611 DEAD/DEAH box helicase-likechromosome CDS2965264 1503 + 0.510978
NA Noc_2244 Protein of unknown function DUF927chromosome CDS2590060 1977 + 0.525038
NA Noc_0846 DNA polymerase III, alpha subunitchromosome CDS924212 3477 + 0.50417
NA Noc_0217 Deoxyribonuclease Vchromosome CDS240162 660 + 0.568182
NA Noc_0223 DnaB helicasechromosome CDS245434 1419 + 0.534179
NA Noc_1364 Helicase c2chromosome CDS1510384 1923 + 0.525741
NA Noc_0672 Transposase, IS4chromosome CDS728217 1329 - 0.54778
NA Noc_2068 putative transposase gene of IS630 family insertion sequence ISY100dchromosome CDS2379438 552 + 0.469203
NA Noc_1657 TatD-related deoxyribonucleasechromosome CDS1851847 786 - 0.435115
NA Noc_0499 Transposasechromosome CDS537627 1353 + 0.572062
NA Noc_2515 Phage SPO1 DNA polymerase-related proteinchromosome CDS2863266 696 - 0.568965
NA Noc_2768 Transposasechromosome CDS3140259 1179 - 0.571671
NA Noc_0048 Transposasechromosome CDS47396 336 + 0.529762
NA Noc_1187 chromosomal replication initiator protein DnaAchromosome CDS1294620 699 + 0.532189
NA Noc_2402 conserved hypothetical proteinchromosome CDS2751714 207 - 0.531401
NA Noc_0519 Transposase IS200-likechromosome CDS561289 351 - 0.450142
NA Noc_0988 UvrD/REP helicasechromosome CDS1091772 3441 + 0.544028