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# Thiobacillus denitrificans ATCC 25259, ATCC 25259

>Tbd_1318 probable integrase/recombinase protein
MSLSRHRARRAKPRVTRYLDRGLWQEVTTYIEALPKESERERDHYFRIRW
LFTLLYLGGLRISEVVENSMGDFFSRRDRDGEERWWLEVRGKGGKERLVP
ATKEMMIELTRYRREKGLPPYPGSGEKTPLVLPIGKSHEPLTRTSPWMSM
RWGYWQATASTGWICCIWSLSERPSSKWPTSTSPGLSVSQ
>Tbd_0703 conserved hypothetical protein
MEFDANCRACPRLATFLDEVRGRHPDYHARPVPPFGDAAPRLLIVGLAPG
MHGANRSGRPFTGDHAGILLYETLHRFGYASAPASRARDDGLQLTGCRIT
NAVKCLPPANKPEPGEIRACNGYLAAEIAGLPGGATILALGQIAHQAVLR
AQGLKLKDYPFTHASDYALPGGLRLVSSYHCSRYNTQTRRLTPEMFAAVF
TQIQRKD
>Tbd_1571 probable site-specific integrase/recombinase
MPNIRRKNGQFQVRLTVKGKSISATFPTREAATAWAVATRQELLLGKHAD
VERARRHTFGQLLDRYSEKITPTKRGQRQEMQRIRMLRAHPIAARIAGEL
TSMDFADLRDELSPGRKPNTVRLYLSLCQHVYRIAISEWGFSTMSNPLAG
LRKPEVDNARDRRVSAAELDLIVAAIQDLRAPWFPWLFFFVILCPQRRGE
ILSTRWSDVDFDLRRLRIGLGKDGKPRYAPLAPDAITLLEHLPRSEDGRL
FPLSANAVNMCWKGILKKTGIKDLHWHDLRHEGTSRYALILGKDIFKLKV
VSGHKDIRSLDRYVNHKAEDVAFELAGGKPPAPPRLPLDEVLYAGTRPPG
GSPNTVPVPVPSEQKTAKVIPFRTSARGRHG
>Tbd_0845 conserved hypothetical protein
MRSSASSSNTPAEPHGTGTVPRGQSAAGGAFADLLARVAACTACAEHLPH
PPRPVLRASPSARLLIVGQAPGRRVHATGIPWNDPSGDRLRDWLGLTRDA
FYDASRIAIVPAGLCYPGTVGGSDLPPRAECASRWQPPLRAAMPKIGLTL
LIGAYAQAYYLGRQRRTTLTETVEAWRDLDPALFPLPHPSPRNRRWFKQH
PWFDAEVVPALRARVGALLGTGDNEPDQ
>Tbd_2588 DNA repair protein RadC
MAIRDWPEDARPREKLLKQGAAALTDAELVAVFLRTGVAGKSAVDLGRDL
IERFGGLGALCRADRVAACRAPGVGEAKYALLQAVMEMARRTLAEDMQAG
DALSSPAAVRDYLRLILRDKEYEVFCCVFLNAQNRVIAVEELFRGTLTQT
SVYPREIVKRALAHNAAAMILAHNHPSGVNEPSQADRSLTRRLAEALALV
DIRVLDHFIIAGASALSFAEAGHL
>Tbd_0812 DNA ligase, ATP-dependent
MARRLSRPATVRPETVRPARVEGLKRVAAALALASALCWPHAARTEAPPA
APAMLLAKVYAADVDVTQYWVSEKFDGVRAQWDGHVLRFRGGGLAPAPAW
FTADFPRVPLDGELWIARDAFDALSGTVRKAPPVDAEWRRVRYLVFELPG
APGDFSARVGQMREVIEQAAVPWLEAVAQTRVASREDLMQRLDAEVRAGG
EGLMLHRADAPYLTGRSDALLKLKPWLDAEAIVVGYVPGKGKYAGMTGAL
RMETPDGKRFRLGSGLSDALRRQPPPVGTRITYRYTALTKNGMPRFPRYL
RVREDF
>Tbd_2211 Holliday junction DNA helicase RuvB
MIETDRLIVPTAVGPQEEQIERALRPRTLAEYVGQAKAREQLEIFIHAAR
KRSEALDHVLLFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERAGDLAA
LLTNLEPHDVLFIDEIHRLSPVVEEVLYPALEDFQIDIMIGEGPAARSVK
LDLPPFTLVGATTRAGMLTNPLRDRFGIVARLEFYSAEELGYIVHRSAGL
LQMNLDEAGALEIARRSRGTPRIANRLLRRVRDYAEVKAGGEATGAVADA
ALVMLDVDRAGLDVMDRKLLGAVVEKFMGGPVGLDNLAAAIGEERDTIED
VLEPYLIQQGYLQRTPRGRVATPLAYRHLGIATPASDAELF
>Tbd_0012 SMF protein
MTSGRSALAAHLSSAQCDAVLGAPDPAQLDAALAWLEQPGNSLMTLGDAD
YPAALLEIADPPAVLYCKGRRELLGRPALGIVGSRNATPQGLRDAEAFAL
ALSNAGLTVISGLALGIDAAAHRGGLAGAASSVAVIGTGLDRIYPARNKA
LAHELAANGLVVSEFALGTPPLPGHFPRRNRLISGLSRGVLVVEAAPDSG
SLITARVAAEQGREVFAIPGSIHSPLARGCHALIKQGAKLVESAADVLDE
LAWQQRLSPPVLPESEPDPVLDALDGAPTTLDSLAQKTGLTLDALSAKLL
ALELDGRIAALPGGRYQKIH
>Tbd_2004 Possible Transcriptional Regulator
MNGIQNLDAMPDCGFVAVRSLAAWLGVSQVTVWRWAKAGRLPAPRKLGKG
TTRWNVGEVRAALASLAG
>Tbd_0624 NAD-dependent DNA ligase
MADRDVQARAAALRREIERHNYAYYVLDAPTIPDAEYDRLYHELEALEAA
HPELVAADSPTRRVGGQPLAGFKPVRHAVPMLSIRTETDTTAAGARAFDV
RVRKELGLAPADPPVEYAAELKFDGLAINLRYEAGVLVAAATRGDGETGE
DVTQNVRTVRTIPLRLHGDAPPAVLEVRGEVFMRRDDFERYNAQQRAAGK
PTLVNPRNGAAGSIRQLDPAIAGQRPLSFYAYGLGEVVGWPDAPATHGAT
LDALQGLGVPVSAERCVCNGVDDLIAFHDDIAARRDQLPFDIDGVVYKVN
AFALQRELGFLTREPRWAVAHKYPAQEQLTTVLGIGVHVGRTGALTPVAR
LAPVFVGGVTVTNATLHNQDEIDRKDTRVGDTVIVRRAGDVIPEIVATVL
ERRPQPEPPRFNILQSYPVCPECGSHVVRLEGEAVARCTGGLYCPAQRKQ
ALLHFASRRAMDIDGVGEKLVDQLVSRELVRTPADLYRLPLETLAGLERM
AEKSARNLIQAIETSKSTTLARFIYALGIRNVGETTARDLARHFGALDAL
LGANETALLGVRDVGPIVAQSIAQFFAEPHNLEVVGKLRALGVHWPETTG
MQQSGGILSGKTLVLTGTLPALTRDQAKERIESAGGKVAGSVSKKTDYVV
AGEEAGSKLAKARELGVTILDEEELLALLGSNKKNG
>Tbd_1215 integron integrase
MEAKAVSQDSPKLLDRVRAEIRVRHYSLRTEQSYVDWARRYILFHQKRHP
AEMGAAEVREFLSHLAVERNVSASTQNQAKSALLFLYREVLKIELPWLDE
VVVAKSAKRLPVVLTQVEVRALLNAMSGTMGLVASLLYGTGMRLLEGLRL
RVKDVEFSRREIIVREGKGNKDRVTVLPENLILPLKAHLEKVRTLHERDL
EAGYGAVYLPDALAAKYPNAARAWGWQYVFPSPVRAVDPRSGVERRHHVY
ETSVQRAVREAARAAGLHKPVTPHVLRHSFATHLLQAGYDIRTVQELLGH
KDVSTTMIYTHVLNKGGRGVTSPLDM
>Tbd_0488 putative TatD related DNase
MPDFFDTHCHLDAAEFDADRDAIHARAFAAGVVVQVVPAVTRDNFAAVAA
TCARYRGCLPAWGLHPMLIGAHRPEHLSDLRAQIEMQRPVAVGEIGLDLF
VRELDYATQEYFYVEQLKIARDYDLPVLLHGRRASDLLLKQLRRIPVRGI
AHAFNGSRQQADAFIKLGFKLGFGGAFTWPRANQLRRLAVELPLEAIVLE
TDSPDIPPAWVGRGRNSPGELPGIARTLAELRGVDTETVARVTTQNAREV
LALAAA
>Tbd_1771 RecJ exonuclease
MPSITTRPCPTEVCAALEQAGLAPAWARLYAARGVSHPDQIAHRLPQLLP
PTAMLNSDRAARLLADAIEAHKKLLIVGDYDADGATACALGVRGLRMLGA
RVDYLVPNRLEHGYGLTPDIVRIAAARQPDLLITVDNGIAAVEGVAAANA
LGIPVLVTDHHLPGDALPDAACIVNPNQPHCAFPSKNLAGVGVMFYVLLA
LRAELRRRGAYEQVAEPDLRVLLDLVALGTVADVVRLDANNRTLVAQGLA
RMRAGLACPGIAALFQAAGREPARATVFDLGFMLGPRLNAAGRIDDMALG
IECLLADSPSAAQQLAQRLDALNRARRDVEADMLDEALAILARFSPSDSY
SLTAYQPDWHIGVIGILASRLKDKFHRPTVVLAASESGELKGSGRSIPGL
HLRDALDLVDKRHPGLILKFGGHAMAAGLSIAAGRQEEFAHAFEAVVRGL
IDPADLEGVIETDGELELAEHRYELALELEHAVWGQGFPAPLFTGVFDVA
AQRVVGDKHLKLTLARDGNAFEAMRFFQSDPLPERIHAVYALMPNEFNGR
RTLQLKLQHWEPAAP
>Tbd_2449 ATP-dependent DNA helicase
MSSSPDGHQRLLDSLNPEQRAAVTLPHESALILAGAGSGKTRVLTTRIVW
LVQTGQVSPHGILAVTFTNKAAKEMLTRISAMLPINTRGMWVGTFHGLAN
RLLRTHWREAGLPQSFQILDASDQLSAIKRLMKAMNVDTEKYEPKKVQWF
INGHKEAGRRARDAEAYDEYSMRLAEIYEAYDAQCQREGVADFPELLLRS
YELLYRNEPLRQHYQDRFRHILVDEFQDTNTLQYRWLKLFAGAHSVIFAV
GDDDQSIYAFRGADTANMAAFEREFAHGNVIKLEQNYRSHGNILTAANTL
IAQNAHRLGKNLWTAAGEGEPIRVFEAYSDQDEASFVVDEVRNLNREGIA
YADMALLYRSNAQSRVLEHALFSAGVAYRVYGGLRFFERQEVKHALAYLR
LLTHPEDDGAFLRVVNFPTRGIGARTLEQLSETAARAGTSLWQAACTSGG
KVAAFARLIEDIKRATADLPLPEAIGHVVEASGLADYYRADKDGADRLEN
LNELVNAAALFAEESAAEASASDEPAPSELDRFLAHAALEAGEHQAEAGR
DALQLMTVHAAKGLEFEAVFITGLEESLFPHEQSTLQGSGTHADEGLEEE
RRLMYVAITRARRRLYLSHAQSRMLHGQVRYGIASRFLSELPEQVLLHLN
RRATPAHVREAPAPSPRAARAGEDTGYRVGQSVAHARFGTGIIIDFEGRG
PDARVQVKFRDGTKWLALAYAKLSPA
>Tbd_0858 DNA polymerase III, alpha subunit
MTDPRFIHLRLHTEYSIVDGLVRVDEAVKRAREIAMPALGVSDLSNTFGW
VKFYRAARGAGVKPIFGCDVWVSNATDRNRPSRLLLLVQHREGYRRLCEL
LTRAYQENLHRGRAEIDPSWLAENNGGLLALSGGDGGNVAQAIIDDKPAV
ARAAAEAWAALFPGRYYLELQRFGQAHTERLIDGLLDIGAELGLPAVATH
PIQFLAADDFKAHEARVCIAEGMMLGDPRRPRPFTAEQYFKTPDEMAALF
ADLPEALANSVEIAKRCNLTLELGKSKLPDFPTPDGMGLDDYMRQRAYEG
LAERMAHLYPDEAERAAKRPEYTERLEFELGTIIQMGFPGYFLIVADFIN
WAKNNGVPVGPGRGSGAGSLVAYCLRITDLDPLAYDLLFERFLNPERVSM
PDFDIDFCQDGRDRVIQYVKDKYGHAAVSQIATFGTMAAKAVLRDVGRVL
DLPYLFVDKFVKLVPNELGISLAEAREKEPQIDERARNEEELAELLPLAE
KLEGITRNVGMHAGGVLIAPGKLTDFCPLYQAEGSDAAVSQFDKDDVEAI
GLVKFDFLGLRTLTILAEAVRFVQRHEDRKDFRLEDLPLDDPAVYRLFAD
GNTTAVFQSESRSAKDLEKRLKGDCFEDIIALMALNRPGPLGSGMVDDFI
ARKQGKQKPEYFHPDLEPVLKSTYGIIVYQEQVMLVAQILAGYSLGGADM
LRRAMGKKKPEEMAKQRAIFLEGADKRGVDVKIAERLFDLMEKFAEYGFN
KSHSAAYALVAYHTAWLKAYYPAEFMAATMSSEMSDTDKVRIFYEDCRAN
GLTMLPPDINLSGYRFDPVSRTEIRYGLGAIKGSGEAAIGAIVAERGANG
PYKGLFDLARRVDKRYLNRRVLEALVKAGAFDSLSDHRASLMASIGVALE
TADRAARSGGQVGLFGEVLEGGGEDLVDVPYWPEQEKLLQEKSALGYFFS
GHPFTAYLAEVSGFAKRRLDSLEPAREPVMLAGVAVSLRTQMTRRGKMLI
LLLDDATAQVEVVIFNELYEQSRHLLKDDALLVIEGKVSRDDYSGGVRVT
AERIYDLAGARTRFAQGLRLVCNGQSSGRALSELLAPYAMEEGGCPVWIE
YHNHNARCRVRLGERWRVRLDDRLIESLGGWLKPEAVSVIY
>Tbd_0827 DNA polymerase III, epsilon subunit
MHTTVIPQRLAFVDLETTGANAARDRVTEIGVVVVDGDRVETWSTLVNPE
RAIPQFIQQLTGISNEMVADAPTFARVADELAERLDGRLFIAHNARFDYG
FLKHEYQRLGRRFRADVLCTVRLSRRLFPEHYRHNLDSLIARHGLATEGD
RHRALADADLIWQFWRTLQREHEAQALAEAVAHQLLRPALPPHLDPALLE
DLPESPGVYLFYGENDVLLYVGKSVNLRQRVFSHFAADTREYKAMQLTQQ
VRRVEWRETVGELGALLLESRLIKEGAPAHNRRLRRASELCAWRLDEVAP
GDFRPVLVTADDPDFGRDGDLFGPFSSRRQATLALRKIADAHQLCPVVLG
LEKPARPDSPCFAFQVQKCRGACAGKETAGLHSARLMAALAKTKMKSWAY
PGAIGLVERDDFLDVEEVHVVHAWRYLGTAKSEAEIGELLEHAARAPFDL
DTYKLLKTQLAKSKFTIRAL
>Tbd_0379 Conserved hypothetical protein 95
MLAKQAAPKRAHGAANRVRIVGGRYRSRLLAFPDGTGLRPTPDRVRETLF
NWLGQDLAGWRCVDLFAGSGALGFEAASRGAARVLMIERDANAVAALEKN
RGALGAAVDIVRADALAWLGGNRETFDLAFVDPPFDSDMAALALAGLAPH
IASGGYVYVEQGAETAVPPGFVVHRSGRAGRSHFALLMKE
>Tbd_2823 putative phage integrase
MALSDSKLRTLKPADRVFSESDGGGLYIEIMPTGKRRWGLKYRIPTGKQE
TIRLGDYPAYSLADARTWRDDCKALAGRGLSPMALKRGDPIPEDAAPAAK
ELAQFFIRNWCMKAVEKAKAKEAEAKAADTVEAFAWRWYAEIVEPANSNP
RNIKRILDKDAIPAIGSKQIADVTVTDILAITDKIKNRGADQMALQTRNV
LKRLFAYAIAREKTTFNPAAAIEAKFIAQAKSRDVALSPEEIGRLLRAIY
QSSMKRAHKLALHLLILCMVRKSELTEAKWEELDLEKAEWAIPGERMKKD
KPHLVPLSRQAVAMFEELKGLASGSEWVFPSRSSLKKPIAHNALNTVVRA
LEADVRDFVIHDFRRTASTHLHEAGFNSDWIEKALAHETKGIRGVYNRAQ
YADQRRDMLQWWADFVDSQIQDGRGKVIIGPFGKAYQSAA
>Tbd_0828 DNA polymerase III, alpha subunit
MPYAELHCLSNFTFLRGASHPEELVARAAELGYAALALTDECSLAGVVRA
HTAAKACGMKLIVGSEFTLVEGLRLVVLATDRAGYGALSAFITHGRRNAL
KGRYRLGLDDLLASGLPGCLVVLLPEPLPTLAQARQIVARFPRRAWLAAE
RFRASDDAARLAALDELGEAAGLPRVAAGDVHMHVAGRRALQDTLTAIRL
GVPLAEAGAALHPNGERHLRAPSDLATLYPAAWLAETLVVAARCSFSLDE
LRYEYPEELVPEGETPISHLRRLTEDGLVRRFPDGPPAKVRTLVEHELAL
IEELRYEPYFLTVHDIVRFARSRGILCQGRGSAANSAVCYALFITEVNPA
CMDMLFERFISKERNEPPDIDVDFEHERREEVIQYLYTKYGRDRAALAAT
VITYRPKSALRDVGKALGFDLDQVDRLARSTSWWDGRKVAPQRLVEAGFD
PAHPKVRLLLDRVEELLGFPRHLSQHVGGFVIARGQLSQLVPIENAAMPE
RTIIQWDKDDLDALGLLKVDVLALGMLSAIRRALDELGRLRGRRLELSDI
PSEDPAVYDMLGRADTIGVFQIESRAQMSMLPRMRPRNFYDLVIEVAIVR
PGPIQGGMIHPYLRRRQGLEPVTYPSEAVRGVLERTLGVPIFQEQVMQLA
IVAAGFTPGEADQVRRSMAAWRRRGGLEHFERRLIDGMRERGYDESFAQQ
IFQQILGFGEYGFPESHAASFALLVYVSAWLKRHEPAAFTCALLNSQPMG
FYAPAQLVQDARRHAVEVLSVDVTASAWDCTLEPAAGSRKPALRLGLRMV
KGLSLECGARVAAARAQQPFASVEDLARRGGLAPRDLKHLARAGALAALS
GHRRQAAWQVAGIEQNAPLALDVSEDVQPELLPLSEGQDVAADYAALGLT
LGRHPLALLRPLLARRRLAPAEALGRLAHGRFACTAGLVVTRQRPGTASG
VTFLTLEDETGPTNVIVWRDLAERQRRELLGARLLAVYGVLERQGEVVHL
VAGRLQDLTPLLGRLVTHSRDFH
>Tbd_1016 hypothetical protein
MAGRSKSGLEISALAKVEKKKGEIPDLSEEASRLIENPSLLRRSSSEDLA
ATLAKLHGNVVRLAALRQEFESEFASVEEQIRPHREKALGR
>Tbd_2435 exodeoxyribonuclease III xth
MKIAAWNVNSLKVRLPQLLDFLATRRPDVVCLQETKVPDDAFPSVELSAA
GYRAVFSGQKTYNGVAILSRSQATDVSVGIPGFGDEQKRVIAATVEGTRV
VCVYCPNGQSPDSDKYFYKLAWFDALSLWLMEELARHPRLAVLGDFNIAP
EDRDVHDPKAWEGSVHVSPRERERFQALLQLGLKDSFRLFEQPEKSFSWW
DYRMMGFRRNHGLRIDHILLTDALAASCTSSTIDRDMRKLERPSDHAPVL
AEIGV
>Tbd_2104 putative primosomal replication protein
MNRLLISGALIQVEPLRYSPAGVPIAEAVVLHRSTQAVAAQTRQVECELT
VQASGALADQLAKLPAATQVKLEGALNRRSVNSRQLILILNRIEKE
>Tbd_0896 ATP-dependent DNA helicase RecQ
MPETPLSLLNRVFGYPAFRGEQAAIVDTVVAGDDALVLMPTGGGKSLCYQ
IPALLREGCAVVVSPLIALMQDQVAALQELGIAAAFLNSSLDGATAARVE
RDFVSGQLKLLYVAPERLLTPRFQSLLAEARIALFAIDEAHCVSQWGHDF
RPEYLGLSALHERFPEVPRIALTATADAATRAEILQRLDLGAARVFVASF
DRPNIRYRIAEKTEPRRQLLDFLAEHTGEAGIVYCSTRKKVEETADALKQ
AGLTALPYHGGMDNDTRRRHQEKFLREEGVVMVATLAFGMGIDKPDVRFV
AHLDLPRSVEGYYQETGRAGRDGEPAEAWMAWGLQDVVTQRRFIDEGEAG
DAHKRIGHAKLDALVGLCEAASCRRVALLSYFGEASQPCGNCDVCLNPPT
LWDGTEAAQKLLSTVYRTGQRFGAGHVIDVLLGKTTEKIDRFGHSQLSVF
GIGASQTDKVWRAVLRQLVVRGLLEVDHSAYGALKLTQAAKPVLKGEETV
MLRAIEARPARKKSRLAPSSGAGVHDDEDPLFLSLRAWRRETANEKGVPA
YVILHDATLREIAARRPATLAELGEISGLGTKKLEAYGEDVLAVVAEG
>Tbd_0033 conserved hypothetical protein
MREALDAAIALSPNRSAVVEACAGSGKTWLLVSRMLRLLLAGAAPSELLA
ITFTRKAAQEMTDRLHEWLRVLALADDATVRAFLREREVPADEIDALLPR
ARGLLEAVLSAQPGPTVTTFHGWFLDLLKRAPLEAGLPWGAPLLERESEL
LNEVRERLFARWAAAPASPEGAALLALLASLGEHNLRALLRNFIAARIEW
QAFARDQADPVGYALGELQHCLQSELDADPVAAFWADPALRARVGRLGEA
LEKGSETERKKALAIREAIDAADVVQLRGLILKKDGERLAKKANASTLAA
LGAEADTFLRDYASVEDALEALARHQTDLRIRELNRHGLLLGHALFTAYQ
DAKRRQGVIDFADAEWLGCQLLMSEEYAPALAMKLDARYRHLLLDEFQDT
NPLQWQALSTWLLEARGGGSEMTVFMVGDPKQAIYRFRRGEARVFDAATD
FLHSHFEAARFSTDMTRRLAPPVVAALNPVFAGVTGFAEHRHAPQNAERP
GALRVLPLQVEKTEPVTAGGLRNPLTTARTEAEDRVVDEEARVFARTLRD
EILGRWGVIDKGTSRAAAPRDVIALVKKRTHLHVYERELEAARIPYITSR
RGGLLNALEARDLVALIECLLLPHADLKLAHVLKSPIFDCSDDDLLSVFA
PQPDAGARGWERLLALAEAPHATAEAARAARLLPRWRERCGTLPVHDLLD
HIYCEGDVEARYAAAVPPARRPQVEANLRAFMQLALTQDAGRYPTLAGFV
RELASLIDDADASPDEGLAADGADAVRLLTIHGAKGLEAPIVWLLGGSDR
PHGESYGVLAPWPPDAPAPLHFSLFGKQDERGAGRQGSFDEEKTLAEREA
DNLLYVALTRAEQALIVSGDAGKNAWVQRVEAAWHALDLPADLPVAAEAG
THNIELRTPIEAPPIGRRVASPGHNAAAASGEFFHACLEVHAPPGAPRKL
AELAMHLGLEREHARIEAEARALLARPELAHLFDPARYRRAYNELALLDR
DGRLQRADRVVEGEDAVWLVDYKMGEQSRLLSDTALAEAHRAQLAGYRSL
LAALYPHKPVHAVLLLADGRLVEVDTDVANPLSFLEPRP
>Tbd_1942 Serine/Threonine protein kinase
MSGTAGRAEAGPAPLAGPAMRGELEVSAGQYSDRGRKEINQDFHGIRIPE
ATQRRAKGVVVALADGISSSTVGHVAAQAAVAGFLEDYFCTPDAWSVKTS
AQRVLTALNAWLHAQSQRSPYRYERDRGYVCTLSALVVKSATAHLFHVGD
TRIYRLRDGTLEQLTNDHRLRLADDVHYLGRALGINAQLEIDYRAEALEA
GDVFVLATDGVYEHVAAGFVADAVATHGDDLDRAAAAIAGQAYAQGSADN
LTVQILRIDRLPNAGARELRNQLAARPLPPILQGRMRFDGYTIVREVHGS
SRSHVYLAVDEESGARVILKAPSIELQGEAGYLERFLMEEWVARRVDSAH
VLKPSPVRRKPGYLYTAMEFVEGQTLGQWMIDHPRPDLETVRGIVEQIAR
GLRAFHRLEMLHQDLRPENIMIEPNGTVKIIDFGSTEVAGMRETDPLAGR
GIELGTLQYTAPERLLGDGGTRAADLFALGVITYQMLSGELPYDTQVARY
RTRADQRRLRYRSLRDGRRAIPPWVDDAIRKAVHPEPERRYENLSEFTFD
LRHPSPSRPASPLIERHPLAFWQGLSLVLALVVVALAAALHATRLPATSA
EPSAERGAAFVSSQPSERRSR
>Tbd_2275 hypothetical protein
MELKDYQARVLADLAGYLDVLDGTPNLAQAFRDYWAGKGVRVGGDDGIEP
YKNTVPGVPHICAKVPTAGGKTFIAVNALDTVFTALAKRSPRRPKMVVWL
VPSLTILDQTVKALNSPEHPYRKRLDQLFRHRVAVYEKRDLLMGAGFSYD
TAQEQLSIVVMSFDSLRARNKEDRKIYQENGNLASFLQPDQGDPGDWLLP
EHDASALINVIRRLRPVVVVDESHNAESQLSVEMTTNLNPDFILDLTATP
RNNSNIISFVDALALKKQHMVKLPVIVANRTSKGEVIESALILRRQLEDL
AKQEEAAGGKYIRPIVLFQAQPRTDEDNTTFEKIREKLIELKIPAEQIKI
KTADINELKDVDLMKRDCPVRFIITVNALKEGWDCPFAYILASLADKTSA
VDVEQILGRVLRMPHVQQHGHDLLNLAYVFTASNRFMDTLQSVVKGLNRA
GFSDKDYRAIDAQAADTAAQAGAAGTEQLPLGGLFGQATADAEAEPVGEL
DVSGVSPDWEAAAATTAQAGTGARESGATTPDVTPASAAFVADIKARALA
ENQAFEEKAQAGNDDVSPELEDKMNRHKIKDIFRDEALAVRLPQFFIQVQ
NGGFFTEEQPFQLFEREELLKDFRLSQGDATISFEDVETEIYRVDLEQLG
DENYAPRAFKLAARERVQFTNYLLALSHESQMMNLVSRLTELVGNMYPIT
DPEVKEYIRRVVTGMNAEQIRDCIERDVAYVRKIKQKITALANAHAQKTF
TDMLDVDRIAMQPSFALPDSITPSANASAVPKSLYVTEAAMGDFERRVIN
DVANLGSVQWWHRNGSRGKGFRINGFLNHYPDFIVKTKPGRIILLETKGD
DRDNTDSELKLKLGKLWEAKAGRGYRYMMVFEHNPIDGAERLADALVKLR
QL
>Tbd_1810 C-5 cytosine-specific DNA methylase
MPSFYEFFAGGGMARAGLGAEWDCLFANDFDPKKAASYAVNWDGDELRVG
DVGTLTVPDLPGRADLAWASFPCQDLSLAGAGAGLKGERSGTFWPFWKLV
KALGDEDRAPRLVVLENVYGALSSHGGKDFAAICAALAGAGYRFGAVIVN
AVHFLPQSRPRLFIIGALKSMPVPLGLVAGGPAGEWHPAALVEAYGKLSR
RSQGAWVWWDLPAPPIRASIFADLVEDDPQGVTWHTPAETKKLLALMNPH
NLAKVEAAKKAGRRMVGTIYKRTRADGPNGEKAQRAEIRFDDIAGCLRTP
VGGSSRQTIMVIEGKRVRSRLLSPREAARLMGLPDTYMLPKNYNEAYHLA
GDGVAVPVVRFLADSVLEPLLAAALATEKKAA
>Tbd_1825 putative DNA helicase
MSGLIITDSGYDWPILDIARALETEPEPLDFVLPGLLAGTVGSLVAPGAT
GKSFLALQVLAQITTGRDTLGVGEHPTGTVVFLAAEDPSNVLHMRIKAVA
QQLSERERGDMKANSLISPCLGKAGDLMDDGKTVAGIEKMARGARLVVID
TLSRWHGGEENERRDAARVMRAMERIAADTGAAVVFLHHANKAAALNGDV
DKQQSSRGSSVFVDEARWVAFLQTMTEGEAEVFGVKEEDRKQLVRYGVTK
ANYCPPLIDIWLRREAGGVLVRREMPGVVKAKAKTYAAASGGRGDDNDW
>Tbd_2580 Holliday junction resolvase YqgF
MSDAQTHGTVLAFDLGLKRTGVASGELAIGIAHPLTVIQAESTDARMAAI
EKLAAEWQPALFVLGLPTRADGSENEMTRVARNFARRLESRFERPVFLID
ERLTSATAESELHARGIHGKKNKALTDAVAAQLILQGFFDARLTA
>Tbd_2030 DNA repair protein RecN
MLSHLSIRNYLLVEAVELDFGPGLTVLTGETGAGKSILVDALALALGDRA
EGGVVRQGAARAEIAAEFSIAGLPELARWLDAAGVAADDDVLILRRVIEA
NGRSRAFINGSVSPLSQLKEAAEFLLDIHGQHAHHALLRAQTQRDVLDAY
AGAQQQAAAVGAAWHAWQAARQQRHDAAAHGQARQIEREGLQLAVEELCA
LGDDLARWDEIQAEHGRLAHVTTLLEGSQALIGGLDEDESSISGVLAGLS
GRLAEMRALDESLGDVAQLLEAASADVAEAALDLRRYADTLSLDPERLAE
LDRRLADMHRLARKHRVQPGALAPLLDQFMARLAELGADDDVEALQAKED
TAWAQYRDLAGKLGRTRRRAADALAGQVSAAMAELALAGGRLEIALVPSS
EPRAHGLEDVQFLVASHPGIASGPLAKVASGGELSRVSLAIQTALSGVAG
VPTVIFDEVDVGIGGSVAEAVGRRLARLGETRQVLVITHLPQVAARGSRH
LRVAKQAKGGFVSSNIESLDAAARVEEIARMLGGIRITSTTRQHAAEMLA
G
>Tbd_2073 putative integrase prophage protein
MLPHAVAWHSMEIPTERGYGGGYMSNAPSRYPQKRYPMPLTDTAIKKAKP
SVKPYKLTDGGGLYLLVTGTGRYWRYNYRFGGKFKTLALGTYPDVSLGRA
REKHADARRQWADGIDPGALKRAAKVRAAECAANSFEAVARSWFAKAYAD
KAQTTRDKTLTRLEQDVFPWIGARPVSEIKAPDVLEVIRRIEQRGALDIA
RRVFNYISRTLRYADSHGMVDRDVSASIDLSLVLTQRETRHHAAITSPQA
VGGLMRAIDGFTGGFVTLCALKLSALTFVRPGELRHAEWEEFDLDGGTWS
IPGRKMKMDNDHIVPLSAQALAILRELHNLTGRGRYVFPSERGGSRSMSE
NTVNGALRRLGFTKDEMTAHGFRAVARTLLDEELGFRPDFIEHQLAHAVK
DPNGRAYNRTAHLGERRKMMQAWADYLDKLKAGADVIPLRGKTAA
>Tbd_2068 DnaB helicase
MNAHDLNQPPHSVDAEQAVLGGLLLDNGAWDRIADLLTPADFYLADHRLM
FETMRDMFERGEPVDVVTLAARIEARGEAQKVGLGYVATLSTQTPSAANI
VRYAGIVTEKRARRDLLAAGHRIAGMASTDGGDAGDAIQEAQALVMALTE
GRSAGSEPQAVDDLLPAVLRSIDERFHKAGEFSGVASGYGDLDRLTCGLQ
PGDLVIVAGRPSMGKTTLAVNIAENVAADGGVALVFSLEMGARQLVERSV
CRFGGISTTAVRNGDMRQEDFERLLVAHKRLQGKRLVIDDTPSTSPARMR
AKARKVKHRYGRLDLVVIDYLQLMAGDGNTRSEQLGGLTRALKLMARELG
APVVLLSQLNRGLEQRTDKRPVLSDLRESGAIEQDADVVLMVHRPDYYDA
DSPHTGLAEVLIRKQRMGPLGTVTLCFEGEFSRFHDVDHDALREAKAHAY
TASNPRPTRRKGGFDD
>Tbd_1491 adenine specific DNA-methyltransferase
MARQPKEAYDLTDAEKRDLIQLIQEGKALPEKYRFILFEDKREVELVWNG
KSREVCTTVLPFQSLEHVDEPRLEKPELGTMDLFDTRGRQLKGWTNKLIW
GDNKLILSSLKSGALRQQIEDAGGLKLIYIDPPFDVGADFSMDIEIGGET
FHKEPNLLEQIAYRDTWGRGADSFISMVYERLILMRDLLADDGSIYVHMG
KTVAHYVRLACEEVFGSANIVNEITWKRSHAHGDTGQGASHFGRTTETIL
LFRKSEKGIWNPQHKPYTDDVLARDYKYTEEKTGERYRLMPVDGPGGAAK
GNPYYDFLGVKGYWRYSFETMTKLYEQGEIVLSSTGKSLSRKKFLKDAEG
TPVVDLWDEVNRISPTSSERLDYPTQKPEALLERIIKASSNEGDLVADFF
CGSGTTAAVAEKLGRKWIATDLGKFGVHTTRKRMIGVQRQLKDSGKPFRA
FEVLNLGRYERQAYLNVGGRLNGHQKEQLLAQKEREFRDLILRAYKAQPL
EGESFFHGKNAGRLVVIGPINLPVGRLFVEEVITECRKRGASRVDMLAFE
FEMGLFPAVLEEAKQKGIDLVPKQIPPEVFDKRAVEKGQVVFFDISFVEA
TPRYAKKDKFTLQIELTDFSVYYTQGAAEAAAASLKNGKSQVVCEQGQLI
KLSKDKDGVVTREILTKNWTDWVDYWAVDFDYMSRKEIIKVAKGAGIDGS
LPGFEPPQGELTLPEFEERWTGGYIFENEWQSFRTRKSRDLEMISAPHTY
TQAGRYTVAVKVIDIFGNDTMVLVPVSVG
>Tbd_0475 Serine/Threonine protein kinase
MATQPNQALPNGYRLNEYTIIRKIGGGGFSMVYLARDDANQSVAIKEYLP
GALVLRTEGSVVVQASSTENNNIFRHGMKCFFEEGRALARIDHPNVVRVV
NFFRANDTVYMVMRFERGKTLQQHIQANRGSIRESFIRRVFAQLLNGLRE
VHTHKLLHLDLKPSNLYIRLDGSPVLIDFGAARQTLTQEESKLQPMYTPG
FAAPEQYHNRERLGPWTDIYSVGASLYASLAGYPPQAADARLLNDKLVPA
TVNWRGAYSDQLLETIDSCLKLNYMERPQSVFSLQKVLMDRSAMMPPRSS
LLSSLRRQLNRELF
>Tbd_2214 Crossover junction endodeoxyribonuclease RuvC
MRILGIDPGLRLTGFGLIEQTGQKLAYVASGVVKSGEGSLPARLGILFGG
INEVIATYRPDTCAVEIVFVNVNPQSTLLLGQARGAAICAAVSNDLTVAE
YTALQIKQAVVGHGKAAKTQVQEMVKRLLALPIAPTADAADALACAITHA
HGSRLGAQSTAGYRLKGGRLV
>Tbd_0515 DNA polymerase subunits gamma and tau
MTDLFGESASPAMALARKWRPRAFADLRGQEHVVQALSNALTQGRLHHAY
LLTGTRGVGKTTLARILAKCLNCESGVSATPCGTCSACTQIDAGRFVDLL
ELDAASNTGVDNMREVLDNAQYAPTVGRYKVYIIDEVHMLSKPAFNSMLK
TLEEPPAHVKFILATTDPQKIPVTVLSRCLQFNLKPMTPALVAGHLGDVL
AQERVDAEPAALNLLARAAAGSMRDALSLTDQAIAYGGGRIEAAAVEAML
GTVRRDYLFDLLDALAAGDGDALMTQARLLAERGIAFDATLQDLGNLLTQ
LALVLHAPGAVEDGADAERTRAAAEKLDAETVQLYYQIALNGRRDLPYAP
DEFSGFCMTLLRMLAFAPATDPTPRSPGGGRAPVASADSTPAAAPLAAPA
PARVPAAAPAPLQQPEAARQVASAEPLAAEDADSPRAAAAPPDAPFVAAE
PAPAAQWDWLAVVAGLRLGGMAKMLADHCELVAQTGDSVTLRVGEAHKHL
LDRAYQDRLTGALREKYGPALQITFEVGSAADQTPQQVRTRIKEARQAEA
IAAIEADPFVRELVEQFGGQVEASTIQPLAP
>Tbd_2457 Transcriptional Regulator, Fis family
MIEENEIAACVRRSLNRYFKDLDGEIPSEIYGMVVSAVEKPLLAYILDRA
EGNQTRAAEMLGINRNTLRKKMREHGLSD
>Tbd_1812 DNA mismatch endonuclease
MTETPELRSRTMRAVRSRDTTPELAVRRLLRGMGLTGYRLHRNGLPGKPD
VVFVGRKKAIFIHGCFWHGHDCQRGRRVPLTNADYWLPKIQRNRQRDAKH
LTELARLGWSVLTVWECDLRDPIELTARLRSFLERTV
>Tbd_1686 putative ATP-dependent exoDNAse (exonuclease V) alpha subunit
MLSVSVIGAGSEAAGYAAYQENEVAAAQREDYYAGEGDVGRWVGKAAQEM
SLAGELKPGQLLAGLQGFHPETGEALSKNAGEKHKGGWDLTFSAPKSVSC
VWAVADPETRGAIEDAQNAAAARALQFLEESGAFTSRSRNEPGPVEGVAA
AMYQHGTSREADPQLHTHVAVLNVQPDGTAMDFDTRWKMAAGAVYRAELA
AEMQKLGLRVEADGKSFRVVDVPAAVEKEFSTRRGQIEEALAAKGLKSAK
AAEVAALSTRKGKEPTTRDELFADWKTRAAEHGFSLESIQALRNAPRQQA
EELDLDEILGKLTEQASTFTPQQLAAAVAVEMQGRGGADAIQKALRDLTK
HPDLVRLESDKPRHLMRGEPTETRYTTREMLGIEQGILDKSMARQTDMSH
RADIAAAIAARPTMTDEQKAALKHVCEDPGAVKIIEGMAGTGKSYLMDAA
RESWEAAGFEVEGAALAGKAASGLESGADINSKTIHSLLFQLDSGQRQLH
SKSILVIDEGGMVGSRQLARVLDHVHKAGAKAVMVGDSWQLQPIDAGGAF
RLLSERLGSARLENIVRQKHEVDRRVVRLFADGKAAEALESMRERGLLKT
AETRAQAMQEMVRDWAQARDPSKPGESIMLAATRSEVAHLNNSARQILKA
EGRLAGGLQVPTAGGMKEFAVGDRIIFGKNNSVFGVKNGELGTVESVRFN
KTGQVEITARHDNGKAVKFTVGEEKGQFEVFDYGYAMTVHKAQGVTVDRA
FVLPSDSMSSREWTYVAMSRHRLEARMYITRDSVEALTKTMSRAQGKETS
LDFKLAATSEKTDAPESTTSLDREATEASTSTQKENAPQALDAVSVSRHV
ADKAVDSAGLSDKQKHQVNKVLDVAELAAHIKTGNLAGAVRKAEDVQKHI
HDEGLAP
>Tbd_0383 formamidopyrimidine-DNA glycolase
MPELPEVETTRAGLSPRLQGRVLTRVIVREPRLRWPIPPDLDTQLRGLTL
HGLARRGKYLLFDFGAVTQLVHLGMSGSLRLTEPAEPAARHDHVDWRFDD
GTILRLRDPRRFGAVLLTENAPGHPLLAGLGPEPLSTAFDAAYLHTQCQR
RKTAIKPLIMDAHVVVGVGNIYASESLFHAGIRPGVAAHRLSRAACARLA
DAIKQVLTAAIAAGGSSLRDYVQSSGELGYFQLQTRVYDREDAPCRRCAT
PIRRIVQAQRASFYCPTCQR
>Tbd_2453 DNA polymerase A
MNDPSVSQPGKTLLLVDGSSYLYRAFHALPDLRNAAGEPTSAIKGVLAML
HRLRKDYAADYIACVFDAKGKTFRDDLYPAYKANRPAMPDDLRSQIEPLH
EAIRAEGWPLVVIDGVEADDVIGTLVRHAAQKGIRSIVSTGDKDMAQLVD
GHVTLVNTMSLETLDEAGVVAKFGVAPDRIIDYLTLVGDAVDNVPGVAKC
GPKTAAKWLAEYGTLDNLLAHADAVKGAVGENLRAVVDWLPQARALLTIK
TDVALPFDFDDLVLKPRDIDALRGLFERYEFRTWLRELDASPATAVSSEP
DCSGSHRAGYEIILSEAQLDAWVARVATADAFALDVEASSASPLQCELIG
LAFAVCEGEAAYLPLGHHYAGAPAQLSRAAAFARIKPLLEERAAKIVGQN
LKYARHVLANCGIALGGAADDTLLQSYVLEAHQPHELASLANRHLGLATL
ACDELTGKGAARIGFDQVAVERAGEYAAEQADVTLRVRGQLAARIAASEK
LEYVYREIELPVSEVLFRMERAGVLLDRALLAAQSGELGRKMLELEQRAF
QEAGQPFNLGSPKQIGDILFAQKGLPILKKTPGGAPSTDEETLELLALDH
PIARAILDYRGLAKLKSTYTDKLPQMVHPLTGRLHTSYSQATAVTGRLAS
VEPNLQNIPARTAEGRRIREAFIAPPGHLLVSADYSQIELRIMAHLSDDA
GLLHAFANDLDIHTATAAEVFGVPLDAVSAEQRRIAKVINFGLIYGMSAF
GLASQLNLERSAAQAWIDRYFTRYPGVANYMLRTRESARAQGYVETVFGR
RLYLPEINARNPQRRQGAERAAINAPMQGTAADLIKLAMIAVQRWIDSER
LGTRLLLQVHDELILEVPEHELERVRAELPSHMCDVAALKVPLRVGVGVG
GNWEAAH
>Tbd_2029 nuclease (SNase-like)
MRPLLGLILLFAAALAQAETIAGRVVVVIDGDTVLFRPDSYGAASRAFLK
VRLVDIDAPEADQAHGDVATDALESLTLKRHGSLEIVATDVYGRKLGRLA
VDALAVNAELVRAGHAWASSRDRRVRALEREARRARRGLWQDQDAVAPWA
WRRARAASASR
>Tbd_0852 putative hydrolase
MSEPLRWLPHVVVAAIVERDGRYLFVEEHTAEGLRLNQPAGHWERGETLI
DAVRREALEETAHRVEPRALLGCYSTYYPGKDITYLRFAYVCEVTGHEAD
NALDTGIVRAVWLTPEELAASAVPHRSPLVMRCVDDHRAGRRFPLDFVSH
A
>Tbd_2378 tyrosine recombinase XerD
MNDALIDRFCDHLWLEDGLAELTLAAYRRDLRSFAGWLDKTRARSLDAVA
PGDVEAYLGWRFAHHVGPRSAARYTSALKRFYRYLLRENLIAADPTLNLD
RPKLPRALPASLSETDVERLLERADSDTPQGLRDRAMLETLYATGLRVSE
LVGLKLNALNLDDGVLRVTGKGNKDRLVPLGEEAVRRLRHYLAEARSQLL
RRQVSDAVFVTPRGAAMTRQAFWYLIKRRAAAAGVTRQLSPHTLRHAFAT
HLLNHGADLRVVQMLLGHSDISTTQIYTHVARERMKRLHAAHHPRG
>Tbd_0701 Excinuclease ABC, C subunit
MSVDKEFLASLPTLPGVYRMVDAAGAVLYVGKAKDLRKRVGSYFLKTDQS
PRIRLMLKSVDHIDTTVTRTEAEALLLENNLIKGLKPRFNILFRDDKSYP
YLLLTGHGYPRLAYFRGAPKKRDQAFGPYPNSYAVRESIQLLQKVFQLRT
CEDTVFGNRSRPCLLHQIKRCSAPCVSLVSAETYARDVAEAMLLLKGEAT
ALTEEITAQMNAAAENLDFETAAYLRDRLRMLATVREKQFVDTTGSEADA
DVVAVAEVGGVIAVNLTMIRGGRHLGDRSFFPQHGEGAALGEALEAFVAQ
HYLDHPIPARILVSEAIDSAALQTLLSEQAGKKVTLQHRVTGERRVWIAM
AQANARLSAERRSADRANQSQRLAALRDTLELPTLNRIECFDISHTMGEA
TIASCVVYEGDDLKKSDYRRYNIEGITPGDDYAAMHAALIKRFHRTVEEN
GVLPDLLLIDGGKGQVAMAVEALAELGIDDVLLLGVAKGESRKPGLETLI
FADGRELKLARDHPGFHLIQQVRDEAHRFAITGHRAKRGKARVQSTLEDI
AGIGPKRRKQLLEHFGGLQGVRNAGVDALASVNGISRELAEIIYNALH
>Tbd_2528 tyrosine recombinase XerC
MNPFAPYLQHLAAERRLSAHTLSAYARDLENLARLTDGKPLDTLTSHDIR
GAIVKLRAGGLAAASVARQLSSWRGFYAFACRRLGYPDNPCAGLRPPKAS
RALPDILSPDACARLLDAPDGDEDLLATRDRAMFELFYSSGLRLSELVGI
DLPDLDLASGEARVTGKGKKTRLVPVGRQAVAAITAWLPLRLTLVRTPTE
ALFVGQRGARLTPRNVQLRLARWARASGLGQHVHPHMLRHAFATHVLQSS
GDLRAVQEMLGHASISTTQVYTHLDWQHLAKAYDQAHPRARKKD
>Tbd_0222 conserved hypothetical protein
MQQLLLDVRPPARPDLGHFVVGRNAELMNQLAAMIEGAAVERSVYVWGAP
GTGKTYLLAAWARACEARGLTVDYGAQQPAQAVVADQLESWDADRQHTGF
ATFNRVREAGGLWLAAGSVPPAELPVTPELRTRLGWGLVFQIHGLDDAEK
RAALVHHAETLGFRLDTQVADYLLNHTSRDMQSLLRVLEALDRLSLETRR
AITLPLLRQLLAAVPRS
>Tbd_0010 DNA topoisomerase I
MSKLVIVESPSKSKSLKKYLGADYDILASYGHVRDLEPRTGAVDTENFSM
KYQIIERNAKHVDAIVKAAKKADEVLLATDPDREGEAISWHISEILKEKK
VKTPMKRVAFYEITESAIQDAVRNPREIASDLVDAQQARRALDYLVGFNL
SPLLWKKISPGLSAGRVQSPALRMIVEREEEIEAFVAREYWTLHLDSHKG
SQAFTAKLTHFKGEKLDQFAVEHEARSKEWLATLESKDARVMRIEKKRRA
RNPAAPFTTSTLQQAGVRQLGMTTDRVMRTAQQLYEGIDLGEGPVGLITY
MRTDSVNLAQEAITDIRKYVGANFDKDYLPPHAVQYKAKTKNAQEAHEAV
RPTSVLRTPDAVRQFLTQDQARLYELVWKRTVACQMTAAQFDTVAADITV
GEGTFRATGQTLAFAGFLAVYQDDEDDEGESKLPALVEGETLPVDRLYGE
QHFTQPPPRYTEASLVKALEEYGIGRPSTYASIISTLQDREYVVLEKKRF
QPTDVGRLVNCFLTRHFSHYVDYDFTAKLEDKLDDVSNGKRVWSRLLGEF
WSGFEGDLKAKQDVERGCPILEACPKCAKPLFMQASKRGLFIGCSGYPEC
DYTRPLHPATAEGDNILGKDPASGLDVKLLSGRFGPYVQIGDMPEDKKAP
KPRRASWPKDIPLENATLDLALKFLSLPREVGHHPTTGLPIVANNGRFGP
YLLHDGKFKSIPKTDSVYEIDLPRALEVLAMERAPRGADSAASVLKNLGP
HPEDGKDITVRSGRYGPYVKHGSTNATLPKDITPEAVTLDEAIGLIAARV
AKGPAKKPPRKAPTKASATKTKAADTATKPAATKKAATKKAPAKPAATKK
PASKKAA
>Tbd_1733 DEAD/DEAH box helicase
MTVETTFASLALAEPILRAIADAGYTAPTPIQAQAIPHVLAGGDLLAAAQ
TGTGKTAGFTLPILHQLSTRAAVAPKPGRPRCLILVPTRELAAQVEESVK
TYGKYLSLTSMVMFGGVNINPQFKALKARVDILVATPGRLLDHVAQKTVD
LSGVEILVLDEADRMLDMGFIRDIRRVLAVLPKQRQNLLFSATFSDEIRT
LANGLLNNPKSVEVARRNTTAEVVEQSMHRVPQAHKRDLLAHLIKHHDWQ
QVLVFTRTKHGANKLAEKLNKDGITAAAIHGNKSQSARTKALASFKDGSV
RALVATDIAARGIDIDQLPQVVNFELPNVPEDYVHRIGRTGRAGATGSAL
SLVDDEEMGYLRDIEKLIKRAIVRVEIEPGFVPPAKADLMSDERPPRPPQ
GRGASRAGQNGGPRQGQGGRGGQGSGRNANRPAQGKSAAAPVKPASGRAA
APNSPAQPRKPRPQAALFSAKPGSRGH
>Tbd_2130 A/G-specific adenine glycosylase MutY
MNSFASRIIQWQRCHGRHSLPWQATRDPYRIWLSEIMLQQTQVATVIPYY
ARFVARFPDLPALAAAHEDEVLALWSGLGYYSRARNLYAAARTVLDEHAG
IFPDVPETIARLPGIGRSTAAAIAALAFGRACAILDGNVKRVLARHAGIN
GWPGERKVELALWQLAASRLPQAGVETYTQGMMDLGALVCTRGVPACVRC
PVSDDCVARVDGRIEQLPTPRPRKALPEKEVQMLLFVEDGRLLLEKRPPR
GIWGGLWSLPELPAEVDAGRHCRDHFGFRTISLRTLPRLSHTFTHFKLHI
HPVRLDVSPEGSARPGPVWLPFSAALATGLPAPVRKLVLQLGEG
>Tbd_2781 Primosomal protein n
MTPIVQVGLDTPLDRLFDYSAGEAAADLAPGRLVEVPFGRTRQVGVVLGS
LAETAVDGIKLRTILRVLDDRPALAPEVLRLARFCADYYHYPLGAVLLAT
LPPRLKNATPYLADTPWLVVTALGRAEGPAPRARAQHALLEALREAPQAR
AYLRAIKQGRHAAALVAAGWAEWTRLPPEAEPPPEGPRPAPATAEQQAAL
DVLLPTLGEFAVHLVHGVTGSGKTELYLRVIDAVLAAGRQALVLIPEIAL
TPQLEGHFRARFPGRRFATLHSGLAEAARTENWLAAADCDVLLGTRLAVF
APLPRLGLIVVDEEHDTSFKQQDGLRYSARDVAIARGKQAGVPVLLGSAT
PSLESYAQARSGRYRLLELRQRAIAAARLPEIELVDLRHVPQENGLTAPA
LAALHATLARGEQSLVFLNRRGYAPALYCPSCAWVSPCPHCSARLVLHRG
AQRLKCHHCGFETRIPSACPDCGEPDLKPLGQGTQRVEETLATHLPGARI
RRIDRDTMRPRAWAELGTAVHGGEVDVLVGTQMLAKGHDFPNVTLALILD
TDGALYSPDFRATERLFAQLMQVAGRAGRAEKPGRVLIQTAFPDHPLFRH
LQRHDYAAYARELLAERKQLELPPYTRQILVRAEATTMDAALAFLRRAAA
LAPDAPGVSVFAATPAPMARVAKLERAQLLIQSPSRAALQAFVRDWRPRL
ETIRPRPARWSLDVDPLVF
>Tbd_0745 conserved hypothetical protein
MSAYPARATPPRNAPSDPRASAPEGLNYIGAGTPGIRRVRRGARFVYLDP
DGRRIRDREEIARIARLAIPPAYVDVWICADPRGHLQATGRDARGRKQYR
YHPAWIAARGTDKYCRMLGFGHALPKLRAAIAAHLDAPGLAADKVMATVV
ALLEQTLIRVGNPQYARENASFGLTTLQNRHVAVRGSAVQFRFTGKSGIK
HCRTLEHPRLARILKRCQELPGQQLFQYLDTDGHPRPVTSNDVNAYLRAH
GGGDYTAKDYRTWAGSALALALFRRLPWQSRGEAERRVSGVIAEVAAQLG
NTPAVCRKCYVHPAIVEAFVAGELAALARPRRRKHLNADEAALLGFLETQ
HEARCA
>Tbd_2008 ATP-dependent helicase HrpA
MTSSISATNKPAGTSPGLRITYPDLPVAARRDDILAALERHRVLILCGET
GSGKTTQIPKMCLEAGIPPGKLIGCTQPRRIAARSVAARIAQELGSELGG
LVGYKVRFSDKVRPDTAIKVMTDGILLAESQGDPLLSRYDTIILDEAHER
SLNIDFLLGYLKTLLDKRADLRVLVTSATIDAERFSKHFDDAPVIEVSGR
LYPVEIRWRPIARDDEAGAPGNKREAEKPGRTYKDGPDQIAAILDATDEL
ARLGPGDILVFLPGEREIRDTAEALRKHHPPGTEILPLFSRLSVAEQDAI
FKPTSALRRIVLATNVAETSLTVPGIRYVIDPGTARVKRYSARNKVEQLL
IEKVSQASANQRAGRCGRVADGVCIRLYDEADFSNRPRFTDPELLRSSLA
GVILRMKSLGLGDVVGFPFIDPPSSRLVTDGYQLLGELHALDEQGQLTKI
GRQLAKLPLDPRIARMLLAAEQQRCVREILIIASALSVQDPRDRPMERAQ
AADEKHKLFQDERSDFMGWLRLWRWYEEQVQHKKTNRQLQTLLQDHFLSP
RRMREWRDIHGQLHAQVAELGLRENEKDAGYDAIHQALLSGLLGNIGFKS
DDGRAKTGAGRPKPGEGNYLGARGIKLSIHPGSALAKKGPKWIMAAELTD
TGRLLARTVAEVRPEWIEGAGRHLLTRMYIEPHWEKDGARVVAWERVSLY
GITLVPRRKIHYGPIDPELARELFIRGALVAGDYDTRAPWFAHNRALIQE
IEDLEHKARKSGVWLDEARIYGIFDARVPAGIHNGVAFEKWRAEAEAADP
RTLFLRREDILGEGLGADHTLFPESMQVDGVMCALKYRFEPGHPLDGVTL
RVPLYLLNRIEAPQIDWLVPGLIREKLTALLKFLPKDKRRPLIPLPDTVT
AFLSSAQPGERVLTEALAAFVRKKTGADIHPDDWRGELPAHLKMNLCVVD
DSGQELASGRDLGALRQQLGGAARITYGGGAADSEFERTGLLEWDFGDLP
EQVKFKRGGRELTGYPALVDTGTSVDLRLIDTAEAARGETRRGVIRLLRL
ALAAQFKQLDKDLGRETALALKFRTLGSPETLRAHLLDAIAARALLGDDE
TPRDAKAFARQKERAKPRVAVVKQALLRDVAEILDLHAQVAARLAAKPQF
TAVMRDETAHLAALVPSDFITATPWPRLKDLPRYLRGILKRLEKLPAAEQ
RDARAMAGVLTLQNKYQARRAQVRGELPAALDDFRWQLEELRVSLFAQEL
KTPYPVSVKRLDKVWDTLARQPLDQ
>Tbd_0938 hypothetical protein
MANNFGLGSRDMGKAGVFACNSAARSGAISYGTAASVGERWQKFTEFARG
QGVKKLEDVSRELVMAYGKELAESDLSESYGQNLVSAVNSVMSLATKGAW
RAVSPTRECGIEKRSAIRGAAPDGLDREQFRLVLQEMQRDGLGRQAAIAD
LARNLGLRSKEASLLNANQALRQAESTGMVRFIAGTKGGRPRVLAISPVG
LQSLRCAAALQGNNRNLVPTGQSWKQWREGGLRAGRDALKARGIRGLHEL
RSAYACERYSQIAGCPAPVISGKVRDRRVDRLARETIARELGHGRIDVVA
EYVGGRR
>Tbd_2387 DNA primase
MIPRDFIDTLLSRVDIVDVIDRRVPLKKAGQNYQACCPFHSEKTPSFTVS
PSKQFYHCFGCGAHGTALGFLMEYEHMSFPDSVAALAEDAGLPMPESSLE
PERPKPPPALWDALEQAARFYKQQLKQAPHAIDYLKQRGLSGAIAARYGI
GYAPDGSPLKRVFADYDAEALAASGLVVDNEGRRYDRFRDRIMFPIRNVK
GQIVGFGGRVLGQGEPKYLNSPETPLFHKGSEIYGLFEARAAIKRAARVV
VVEGYMDVVALAQHGVEFAVATLGTATTPVHARTLLRHSDRLVYAFDGDA
AGRKAAWRALENSLEALQDGKEVSFLFLPEGEDPDSYIRDHGCDAFLRLL
DNETLPLSAFLMRELARGRRLDTQEGQATLLKDAKPLLEKIGAPLLARLI
QRQIAELTQLQVGDLSAMGLRPVASRPLPPRQQRRIAPSRLRGLARILLM
NPQRASEVEPLWFDARDPLHATAGELIAWLREVGPLRLHTLAEAAKGSGM
EDFVNELMVDLLDKDDTWDWNAEFEGAVQQLRDDWRRRRVQELAARPLAS
LSVEERRELGDLARS
>Tbd_1820 TrwC protein
MVCTVSAIKTAGVAAEYYAQTDDYYRDRGHAPTAWQGKGAEALGLRGEVT
PAQAEAILNGILPNGERVGGGDHRPGWDATFSAPKSVSVAAYVRGDDRLI
AAHDRAVNAAIQYLEREVAATRIREEGEVRTEATGNLVAATYRHDVSREG
EPDLHTHSVIANITQSADGQWRSLESRPLYRLQTDAGAVYRAALARECER
LGYATERTRAGEHPSFELRQVSQAERDMWSTRSRQVEAELAKMGLSRETA
TAEQKQAAALATRQAKGNIGRDNLLSNWREQSRQAGHEMPALPQAQEIDA
GEYRRRAEAAVRQAVEHLSERESRYTERQIVTEARKLGMGGIDDQDIRAA
VADLHRRGELVETQTRQHDAITGQRLEQAGYTTREAQRIERHMLDTASRA
AGAIKPAMSIEAADAAISAQVAKTGHAFNTAQVEATKALLTGTDRITLVQ
GYAGTAKTTSVLAVSSAALQQQGYGVIALAPTHSSAKTLGDAIGAESQTV
AKFLNSRPEVSSQPRIYMVDEASMLSARDMDKLLSRTQGGRVVMVGDVKQ
LGSVEAGAAFRQLQTDGDLKTQVLDYIVRQRSDELRAAVYDAIRGDVQSA
LSKIDVRELDTRESRVGAIAADYAGMSRDDRDRTIIIAPGRDDRRQINDA
VREQLAARGELGGSVTIQALDSRDMTAVESRRAGSYAVGHQVQAGRDYAS
LGLKRGDFARVVAVDVDCNRITLETVTGHQKEIDPSRVTKLAAFEQRDMA
VAVGDKLVNRVNTQTLKNGTPLTVEKIAEGQIHVRDAAGKLHRLDAGAMH
RLDHGYAQTGHESQGRTCTRVLIHAESARTNLQTQQNMYVALSRATDDAR
VYTDNRGALAAQIERESGQKETALAEPEPPPPALELPMPGPAIEPAPWET
SEPAIDVRTPDILEIETPPPAVPEFDFDR
>Tbd_2819 conserved hypothetical protein
MSATDFNDMAAQSGLDAVKHAITSAAASVICEAQGGTENATARDLVGRQN
PDTETGEPDAALMNFGVSQVSGVQASNDGLSADTPADADGVSGVSATMAS
KEPGMDERPCFRVFDGWLEHDGRKYQPGVWYFGIKSGKGEAPPALTETRV
CSPLHIEAVTFDGQDNNFGRLLRFKNTLGRWREWAMPMELLKAGGDDLRG
ELLAMGVEIDPTAKTLLANYLQAKPPKRQMRCALQVGWCGDSFVLPDAVI
GTAASGVIFQSGERGHDEHTRAGTLAGWREEIAARAIGNPLLLLALSASF
AGPMLARCNAEGGGVHFVGDSSTGKTTLLEAGCSVWGGENYRRSWRATAN
GMEGAAALFNDCLLALDEISECDPREVGAIVYALGNGRGKQRAGRTGSAR
AVTRWRCFVLSSGERTIATTMQEGGHRAKAGQAVRLLDVPAARVYGAWDT
LHDLPSGTAFSDAIKRAAVTHHGHAGRAFLERLTRDDQDFCALLERFKGL
MEFSAEGGEGQDKRAAGRFALLALAGEVATDYGITGWSEGEAIKAASEGF
RLWRAARGRGNDERRQILDRVSGFIERHGDGRFSDAENSGETPIRDRAGW
WRDTPEGREYLFTADGMREALKGFDFARALDALQVSGALPTPGADGKRAR
FYRIGGRGVKLYPVQADKLGGDHGAG
>Tbd_2815 DEAD/DEAH box helicase
MSFSELGLDPLILKSVLAAGYENATPVQQQAIPAALSGGDLLVSSHTGSG
KTAAFLLPSIQRLLAEPAVKSIGPRVLVLTPTRELALQVEKAAMTYGKEM
RRFRTACLVGGAPYGLQLKRLSQPVDVVVATPGRLIDHLERGKIDFSRLE
VLVLDEADRMLDMGFVDDIKAIAARCPAERQTLLFSATLDGVVGNLAREL
TRDAQRIEIEAVPHKEAKIEQRLLFADNMDHKNRLLDALLRDVEMVQAIV
FASTKRSTEEISDLLAESGFASDALHGDMQQGQRNRALQRLREGRTRVLV
ATDVAARGIDVASISHVINFDLPRQAEDYVHRIGRTGRAGRTGIAVSFAG
MREGGLVKNIERYTGNRIEVHTLPGLEPTQRPSTGRPGNGRPRGNGPRGG
YEKRSFGDRSEPRSYGDRPRGDSRDNRDRGYRGDARRNDGAPARRFDNGV
RGPSDVPRMTSEQTAGPRGAASKPEVNGNSVEYWEKREREAKAKAATGRS
YGDRGNAARPARGYGNENRGGAGRGGVRGRFKD
>Tbd_2675 hypothetical protein
MGRLAAVTCDTVKPDPKRDRLLGDGDGLFLRIRPHGTKTWVIEYEFQGRR
TKYTIGSYSRNGAPGESIPDWLGHGQQSLTQARSIAGSWKAARRGGHDPA
AEWEALQAKEKQAAAELQAAQKAEQQQPTVTNAIDSFMQKIMAGKKSAPA
IRYRLDRLAALLGDKKIRDVTRQDVIAALDTIAEGLREGQTAKQLAGEVL
TQAKRVWRFARAREWVLVSCVEELTRRDFDAKPRKRDVTLRFDELVVVWR
TLDDPRKCKADPVTVAAMKLLILTGQRESEVCEAPWKEFDLAQGLWRIPP
DRTKAGRAHLVHLAPQAVKILEDVKKITGKERFVFASPLRDKQPVYGRSV
NNALKSLFRRGMLSNVTPCTIHDFRRTLVTRLPDLGFEHFLGHKIANHML
SGVSAHYNHNAYETDREAALKAWAARLEVLATENNVTQLHQAA
>Tbd_1662 DNA polymerase III, epsilon subunit
MRQIILDTETTGLDPAQGHRIIEVAAVEMVNRRLTGNHLHRYVNPDRDID
AGAMQVHGITPEFLQDKPRFGDIAREFVDFIDGAELIIHNAPFDVGFLNM
ELRLLGMPLLATCCGGVTDTLAMAKALHPGQRNNLDALCKRYAVDNTART
LHGALLDCELLAAVYLALTRGQESLSIGLEIPRSESGRAADRPRPAAILL
PADAEEEAAHAALLAAIAKESKGECLWGVEAP
>Tbd_0957 integration host factor, beta subunit
MTKSELIAQLAGRHSQFSIADIEMAVKTILDALAKNLSRGERIEIRGFGS
FSLSFRPARLGRNPKSGERVQVPAKYVPHFKAGKELRDRVDFPL
>Tbd_1967 conserved hypothetical protein
MARPLRLELAGGLYHITSRGDGREDIYRTDTDRTTWLMVVGQVCQRFNWV
CHAWCQMDNHYHLLIETPEANLSKGMRQLNGVYTQSFNRAHGRVGHVFQG
RYKAILVERDSYLLELARYIVLNPLRAGMVKKLEAWPWSSYFATCGQADA
PDWLRTDWILAQFGRQRSGAIRKYVEFVHQGARLPSVWAQLQGQIYLGSE
SFVRNMQALIEKKPALDEIPRAQRRALTQPLADFERRHDRNEAIARAYLS
GQHTMAAIAAHFGVHYTTVSRLVKAYEKTAGG
>Tbd_1511 Exonuclease VII, large subunit
MDWSEDPGMPPPAPPVLSVSELNRMARRALESQLPLLWVEGEVSNFMRAA
SGHWYFSLKDATAQVRCVMFRGRNQFAEFTPANGDHVEIRALPSLYEARG
EFQLGAESIRRAGAGRLYEAFVRLKAKLEGEGLFDPAKKRALPRFPRCLG
VVTSPQAAALRDVLTALGRRMPGLPVILYPTPVQGSGAGAQIAAAIRAAG
TRAECDVLLVCRGGGALEDLWAFNDEAVARAIAASPIPVVSGVGHETDFT
LADFAADLRAPTPTAAAELASPVAEEMLRALERHARLLRQHHARRQQADM
QRLDYLARRLIHPAQQLRRRQLGIAQLAQRLHGAVRARLTREQLRIAQLG
ERRTSPRHALQRQQQVLESLGARAARAAESARIGRGLTLARLASSLAHLN
PDNVLARGYSIVQQENGAVVHDAATLRAGDGLEIRFHRGAAHARVESAQP
E
>Tbd_1542 DNA polymerase III delta prime subunit
MSVAYPWLEPVWQRLLATRSRPAQALLLAGPRGVGKSALALEWARALLCE
APRPDGSACGVCPACHWFETGAHPDFRRVGLQEKTSKEGETRLATAIEVD
QARDAVDFVQLSTYRAGYRVVLVDPADSLNLAAANALLKVLEEPPLNTVF
VLVADQPRRLLPTIRSRCTRLDVGLPALAQATAWLGEQGVDDAPTLLALA
GGTPLAALGWCEGEVLDERRGVLEGLARPQALDPVTLGERWKAVAPQTWH
DVAYKWLGDLLAVRLGGSVQFNQDFIDVLATLGREADLGKLLALAKTQAD
EGRTLAHPLNRSLQLQAWLVEYRHVFD
>Tbd_1517 DNA mismatch repair protein
MSIQVLSDVLISQIAAGEVVERPAAALKEILENSLDAGATAIDVELEQGG
VKRIRVSDDGVGIPRDELALALTRHATSKIATLADLEQVASLGFRGEALA
SIASVARVRLTSRHAGSDHAWTIHVDGGPLQPSSPAARSGGTTIDIEDMF
FNTPARRKFLKTEATEYAHCAETVRRLALAWPQVAFTLVHNGRAQLRLKA
EAAAARVRHVLGEVFEQHAIAVDAAAGALRLSGWVVRPVAATASRDAQHV
FVNGRYVRDKLIVHALREAYRDVLHHQLNPAYCLFVELPPEHVDVNVHPA
KTEIRFRDSRGVHQFLYHAVERLLAAPVAPAAPPSGPDARPPTFLQPRQA
AMSLQVEEAMAFYAPFAAMAPGEGDEARHVPQASAAGLAGRAGPPRAFAS
DSSAVPPLGYALGQLHGVYVLAQNAHGLVLVDMHAAHERVVYEKLKTALD
RRAVPAQALLIPVALTADPREVAEIAPHLDQLREIGFELSITSPNSVAVR
AVPSLLKNADPVELTRAILAEIAEFGVARLLAERRNELLATLACHGAVRA
HRTLSVPEMNALLREMEATERAGQCNHGRPTWFQLRLDELDAMFMRGR
>Tbd_0254 DNA-(apurinic or apyrimidinic site) lyase
MRIISANLNGIRSAATKGFFDWLPTQGADVVCVQELKAQATDLKPEVRQC
DGLSGAFHCAEKKGYSGVGVYTRQAPQRIVEGLGLPEFDAEGRYIEADYG
DLAVISLYQPSGSSSEERQQAKFRFLDAFFPHLEKLVKCGREIIICGDWN
IAHQEIDLKNWKSNQKNSGFLPEERAWMTRLFDELGWVDVYRSLYPAHTG
EAYTWWSNRGQAWAKNVGWRIDYQIATPGIAAKARSAFVYKEQRFSDHAP
LVVDYDHAL
>Tbd_0347 hypothetical protein
MPGFSADLDCVPGSIRSQVEENYRVWRRAWITSSAQPAVNSSGRALRLQP
RHTAQRRTASESGADAGGELNGITIPTTATTRYAERRGISIVRTYADEGK
SGLRIDGRRALQQLIKDVEGGTADFQIILVYDVSRWGRFQDADESAYYEC
ICRRAGIQVAYCAEQFENDGSPVSTIVKGVKRAMAREYSRELSAKVFAGQ
CRLIELGYRQGSPAGFGLRRVLIDQQGSSKGMLARGEQKSLQTDRVVLMP
GPGDEIRIVHQIYRWFIDEGLGDSEIAMRLNSIRVRTDFDRYWTRATVHE
VLTNEKYIGNNVYNRISFKLKKLRVVNTPDMWDQKGRRV
>Tbd_1808 site-specific recombinase, phage integrase family
MATIRKRGELQWQAIVKRKGYPLQSKTWNTRKEAEAWARQIESEMDRGVF
VSRAEVERTTLQDLIGRYRIEVLPNKRGKHFGPALRVLEQHLGKYSLAAL
SPKLIAGFRDKRTKAGLSASTVKKEINLLSKLIDLAGKEWGVALPANPCA
MVSRPVEKNARDRRLQPEEEKYLLTACEQHVALLSRFALETAARLGELLA
LRWADVDTTKRVMVIRGIDERGTKSGDALRAVPLSPAAVSVLDELKKLPR
GIDGRVFYWWKASDSFSKTWGRALTRAHASYIADCEKAGGEPDQAFLIDL
RFHDLRHEATSRLFEKGVFDSMEVASITGHKTLAMLKRYTHLRAEDLAKK
LG
>Tbd_2197 RecA DNA recombination protein
MRTLLRFHLNPGERTMASPALTDDKSKALAAALGQIEKQFGKGSVMRLGD
HDVSRDIQAVSTGSLGLDIALGVGGLPRGRVIEIYGPESSGKTTLTLQVI
AEMQKMGGTAAFIDAEHALDPSYAHKLGVDVDNLLVSQPDTGEQALEIAD
MLVRSGSVDVVVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTA
NIKRTNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGA
IKKGDEIIGNETKVKVVKNKVSPPFKEAYFDILYGQGISREGEIIELGVA
HKLVDKSGAWYAYNGEKIGQGKDNAREFLKEHPEIAHEIEAKVRAAVGVN
NPTIAVEDEDEVEA
>Tbd_1674 Histone-like DNA-binding protein
MNKSELIDAIADSADVSKAAAGRALEATVDAVKKALKKGDIVTLVGFGSF
YVGKRAARSGRNPRTGASIKIKAAKVPKFRAGKGLKDALN
>Tbd_2443 DNA polymerase III, delta subunit
MNVTSDRLPEQLARGLAPLYVLVGDEPLAAQEAGDAIRAAARAAGYSERT
VHTAQGRYNWQGIFAGADNLSLFAERRLTEIRIPSGKPGVDGAKALEAYA
AKLPADTLTLVSLPGLDRKTQQSRWFTALAKSAVVVEARPVERAQLPAWI
DRRLARQGLHAERAALEFLADQVEGNLLAAQQEIDKLALLLPPGAVTLAD
VEHAVVDVSRLEADALQDALYAGDAARFAQVAKDLQDSGEAVPAILWQVA
SAVQLLLRLKLAQSNGESLPALMRTLWGRDKQRAPQIERALKRLSMTQIE
AALGALAGVDRQAKGLDRIGDPWDSLLRAAMTLAGGERRENRTR
>Tbd_0444 NUDIX hydrolase
MTPHKIPVSVLVVIYTVDGEVLLLERADAPGFWQSVTGSQDEGETLEQTA
IREVREETGLDAAQFELSPWDIETRFEIYERWRHRYAPGVTHNTEHVFGL
RLPSRLPVVLAPQEHLRYLWLPWPRAAERCFSPSNAAAIRLVPRRL
>Tbd_2276 adenine specific DNA methylase
MPGCGSGPDGYRASQKLTATTNNMPTLHWVGKDKVINHHHDVPFRVLQKV
STFTAPEGTPANTTDNRIIHGDNLEALKSLLPEFEGRVKCIYIDPPYNTG
NEGWVYNDAVNDPKIKRWLGQVVGKEGEDLSRHDKWLCMMYPRLKLLHRL
LHDDGSIWVSIDDNASGLLRPLLDEIFGGANFVATVIWEKADSPRNSARQ
FSTDHDYILVYSKKPGWTPARLPRNEESDAIYQNQDDDERGPWIPGDPFA
NKPYSKGLYTITGPTGREFSPPAGRYWRVSEEKLRELDDDGRIWWGPTGE
ARPSIKRYLNEVADLVPRTLWTKEAVGSNRSSKNEQRAIFAGTASFDTPK
PSALIERVIQIAASSSDIVLDSFAGSGTTGHAVMKLNAQDSGARRFVMIE
TESYADTLTAERIRRVMTGYGEGTKAMQGLGGGFDYYIVGEPMFLPDDNL
NEAAGTEAIRGYVAYSEGIPTADQTTTDNPHSPYLLGLNRETAWLFHYEP
DRATSLDMDFLAGLRFGGDTGAGKPDTVIVYADRCLLSKDFMIRHGIVFK
KIPRDITRF
>Tbd_1723 putative phage DNA polymerase
MLSRDDVYKELGIAPAWRLRDTASEARAPVCGWEQLSDAVAHCTRCRLAA
TRTQGVLGVGDREADWLVVGEAPGADEDRLGEPFVGKAGKLLDAMLASIG
IARGDNVYITNVLKSRPPGNRDPEADEVAACMPYLLAQIDLVKPKLILAL
GRFAAQSLLATDAALGSLRGRVHSFQNIPLVVTYHPAYLLRNLPDKARAW
EDLCLARRTIQRL
>Tbd_0034 conserved hypothetical protein
MLVPNHRAGLDFARALAREAGRAALVAPQITPLKAWAERFAEAAAEPQAR
RLARLHAALRHSDWLGSVDKWALANELLRLIDELSAARAPGATGQPVLDL
PPDVSPEREVALIEAVWRTLNAGGDDPQARYAAALDALAADLTRAPRPIF
GYALGPLSGGEQAFLARCADHAPLTLYEGDADDPVALTLRQAWLATEPPL
QARATALATRFADSPVVEQITVAPAPHLEAEARAVASWVAAQLRAGRQAL
ALIALDRETARRVRALLERLDVLVADETGWALSTTVAAAVVDRWLECVAS
DFPHVELLDLLKSPFVLDDPAARQDQVLQLELALRRQRVAQGAADIERVA
RQEFGALPAWLASLFDARQRFARTSAPLALWLQRLADSLDQLAARAPLEA
DAAGARVLETLAALGRDLAQDSEKYDFNEWRRWLGLALESASFVDAGVDS
PIVLTSLPAARGRSFDAIAVIGADARHLPALPTPGLFSQATRRQLGLRTS
ADDAADAVTDLIALLGQGPALLSWRAWNDDEPNPASPLVLRLQALHLAAW
SSALPEQGIGEPPARASTLPGRCTRPAPVVPAARLPRRYSPTAYQTLLDC
PYHFFARAVLGIRELDEADDALDKSDYGNALHRILKRFHDGDPPHDPAQA
LALLDACAEAEFAALPAYTAAAWRSKWSAIAPAYVDAWLEWAGEGWRHAS
SESEFAVAVAVAGLGEVTLHGRVDRVDRRGDALAVIDYKTGSAQGLKKKL
RMPDEAVQLPFYAWLCNARAAYLPINEAPVAPLELDGETDVDAISRRLPE
LLAALAAGAPLPAGGVEADCRYCAVRGLCRKGMWHA
>Tbd_0438 Single-strand binding protein
MASVNKVILVGNLGRDPEMRYLPSGEAVANLAIATTDKYKDKSGQMVEQT
EWHRVSFFGRTAEVCGQYLKKGSQVYVEGSIRTRKYTDKEGVEKYATEIR
GDRMQMLGSRSGGGGVADMDDGFNQAPQRSQPRGNAPAGSQRPASSGFDD
MDDDIPF
>Tbd_0209 conserved hypothetical protein
MSLIDVFNGDADGICALHQLRLEQPGQSELVTGPKRDISLLKRVTADTGD
QITVLDIALSKNREALDRLLAVGARVRYFDHHQPGDDLPRHPGFEPHIDT
DANVCTSLLVNAYLHGRRLPWAVVAAFGDNLADAARQAAAPLGLGEAQLQ
SLQSLGECLNYNGYGETLDDLFFDPADLYRQLRPFDDPLAFVAESTAYRT
LRTGFDSDMAQARAVGAAEDRAAGRIFMLPAEKWARRISGVFGNALATAS
PRQAHAVLTAKPGGGYVVSVRAPLANKTGADQLCSQFETGGGRKGAAGIN
HLPESELDRFIAVFFQIYN
>Tbd_2213 DNA recombination protein, RuvA
MIGRITGTLAAKQPPQVLVDVNGVCYEIDVPMSTFYNLPGIGEKVALLTH
LAIREDAHLLYGFGSEVERAAFRELLKVSGIGAKTALSVLSGLSVNDLSA
AIAAQEIGRIVKVPGIGKKTAERLLLELKGKPVFAGALASVPSAGASDDV
RQALLALGYNERETAATVRELPAGLAVGEAIRQALRALSRA
>Tbd_0003 DNA gyrase, B subunit
MSNKPEYAMPADSNGGYDEDSIQQLEGLEAVRKRPGMYIGDTSDGTGLHH
MVFEVLDNAIDEALAGWCDDIKVIIHPDNSISISDNGRGIPVGVKFDDKH
EPKRSAAEIVMTVLHAGGKFNQNSYKVSGGLHGVGVSCVNGLSKWLKLVV
RRDGKKYALTFNQGKVVDRAVEIQNGVEVSPMPVVGDTEGRGTEVHFLAD
EEIFGKVEFHFDILAKRIRELSFLNNGVKIELLDHRDGKSENFAHSGGVK
GFVEYMNRVKSVLHPKIFHAVGEKDGMTVEVAMQWNDSYSETVQCFTNNI
PQRDGGTHLTGMRMAMTRVLNKYIEENEVAKKAKVETTGDDMREGLTCVL
SVKVPEPKFSSQTKDKLVSSEVQPVVQEVVGQKLAEFLLENPNDAKLLCA
KIVDAARAREAARKAREITRRKGVMDGLGLPGKLADCQEKDPALSEIYLV
EGDSAGGSAKQGRDRKFQAILPLKGKILNVERARFDKVIGSQEIATLITA
LGTSIGKDDYNPDKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQMPELVE
RGHVYIAQPPLYKVKHGRSERYIKDEHALKEHLMAEAMKDAELTPMEGAM
PIAGEALETLAREYFLAEAVCDRLARLLPDDVLQALMRIPRLSLADSAAA
MMSEASLGAALDADKFEVAAEYLSETDSHRLRITRHSHGNAYVNFLEADL
LESGDYDQLVKVGDMLRDLMGPGARARRGEKEAPVQSFREAMDWYLAEVK
RGMSIQRYKGLGEMNPEQLWETTMDPKVRRLMKVQIEDAISSDQIFTTLM
GDEVEPRRNFIETNALGVRNLDV
>Tbd_0007 Histone-like DNA-binding protein
MNKSELIDFAAAEADISKAAAGRALDAILAAVTKAVAKGDSVTLVGFGTF
KSSKRAARTGRNPQTGNEIKIAATTVPRFTAGAGFKAAVAGKKAAKKK
>Tbd_0933 DEAD/DEAH box helicase
MESLASTLVDSQVDLNPHQVEAALFACRNPLSRGVILADEVGLGKTIEAG
LVISQRWAERRRKVLIIVPANLRKQWHQELQDKFGLQGLILEAKSYNAIR
KQEQRNPFLFASGPIICSYQFAKAKADDVKGIDWDLVVLDEAHRLRNVYK
TSNVIAKTLKEALSRVHSKALLTATPLQNSLLELYGLVSFIDDRVFGDLD
SFRSQFTGREQSFSSLRDRLAPICKRTLRKQVQPYVSYTARKAIVEEFTP
SSEEQELSRLVADYLRRPNLKALPEGQRQLISLVLWKLLASSTHAIAGAL
ETMAKRLQGVLNETPVVADLAEELDEDYESLDETAEEWEDQEQGTKAASR
AERDAIAQEIEELRHFRTLATNIRDNAKGKALLTALDRAFAELDRLGAAR
KAIIFTESKRTQEYLLNLLADTPYGDGIVLFNGTNSDQRAQAIYKDWLKR
HEGTDRITGSKTADTRAALVEHFKERGKVMIATEAGAEGINLQFCSLVIN
YDLPWNPQRIEQRIGRCHRYGQKHDVVVVNFVDRSNEADARVYELLSQKF
QLFEGVFGASDEVLGAIGSGVDFERRIAEIYQNCREPEEIKSSFEQLQLD
LSGEINEAMVKTRQVLLENFDEEVQEKLRMRADDSRNARNRFERMLMDLT
RAELVHCAAFDDDGFDLRHIPTGVEHSGLTGIELGRYELPRRSGDAHLYR
INHPLARWGIEQAKARALNGARLVFDYNAHGAKISTLEAWRGKAGWLTVK
LISVETLGNQEQHLLVAAGTTDGVVLAEEDPEKLLRLPATTQAANLFNAP
DATLLADVEARKTALLRDVNERNLGYFEQEVQKLDAWADDLKLGLEQEIK
EIDREIKEVRRTAATSPTLEEKLSWQKKQRELEGKRSKLRRELFARQDEV
EAQRNDLISQLEAQLQQQVEERTLFTVEWELV
>Tbd_0166 ATP-dependent DNA helicase
MSLLAALNPPQREAAKYLDGPLLVLAGAGSGKTRVITHKIAYLIGECGYK
PGSIAAITFTNKAAREMAERAAKLTHGVNTKGLIVTTFHSMGLRMLREDA
KFAELKPAFSILDSADAAGIVSEIIKTTDKQEIRRAVSRISLWKNELKSP
AAALASAEDDNARVYAKIYDRYDATLRAYQAVDFDDLIRLPAELLDTHAE
LREKWQNRLRHILVDEYQDTNVAQYRLLQKLTGVRAAFTAVGDDDQAIYG
WRGASADNLRQLNEDYPHLHVVKLEQNYRSTVRILKAANSLIANNPKLFE
KRLWSDLGHGDAIQVMPTKDDEHEAESVVMRLLSHKFQHRTEWRDYAILY
RGNYQARVFEQALRNEKVPYQLSGGQSFFDKAEIKDVIAYLRLIANSDDD
PAFIRAVTTPKRGIGAATLEKLGQVAATLHVSLFEAVFSAAAASQIGERH
LTPLTEFCNFINRMEERVAREPAGELLDDLLKTIGYEVYLFDQDDQRAAQ
SKWNNVLEFAAWITKKGEEDEKNLLQLTQTIALITLLEGREEEESDAVRL
STLHAAKGLEFGHVFLVGVEENILPHRDAVDEGRLEEERRLMYVGVTRAR
KSLTLSYCSRRKRARESVACDPSRFIDELGDEVRMPEKPTTAEAKASGSD
RLAALKAMLG
>Tbd_0881 Exonuclease VII, small subunit
MAKPRAAAAPKDYESALAELEAIVAEMEAGQLPLEASLVAYRRGAELLQY
CRQQLADAEQQVRILENGTLQPFNPQDSDE
>Tbd_2424 N6-adenine-specific DNA methylase
MAPRSREQLPPASHFATCPRGLEELLVAELNAAGAQVVRQLPAGVLFIAD
AAAEMRANLTSRTATRILRKVGYTRYKKEEHIYRAALDLPWPEWFDVTKT
IAVKVGAQNAPLKSLNFITLKIKDAICDRFREETRERPSVDTESPDVPVY
AFFTPDAVTFYLDTSGEPLFKRGFKREASAASIKENLAAGLLLLSGWEPG
TPLLDPMCGAGTILLEAADLALNRAPGRARHFAFEHYRDFDAALWQRIKD
ETKALEKPLTKLPIFGADQDRWVLDKARNNLAVAGYADAIELKVSDLLDL
KPPTPVGTIVTNPPYGERIGEAEDLAEWYPLLGDWLKQNFAGWDAWIISG
DPLLPKAIGLKASRRIPLFNGQIETRFLQYKLIAGSMKVKKPEAASGP
>Tbd_0799 ribonuclease H
MTGRRTVSLHVGPVGLCGVDEAGRGPLAGPVVAAAVMLDPKRPIKGLRDS
KKLTPAARERLADEIRARALAWCVAEASVAEIDRLNILHATMLAMQRAVA
GMSHAPDDVWVDGDRCPEWTWRSQAVVQGDDKVAAIAAASILAKTVRDEL
MRGLHEAYPLYGFAQHMGYATAAHLAALKANGACPHHRRSFAPVRLLLDQ
TSLF
>Tbd_1481 putative phage DNA polymerase
MQRAHCRPARRAAHPEEAQMAEADDETPPTAAPFVPKTRSIDALRRAARG
CRGCALYRNATQTVFGEGASHARVLLVGEQPGNDEDLEGRPFVGSAGRVL
DEGLAAAGIDRAATYVTNVVKHFKWEPSGKRRMHSKPNLREIDACFPWLE
REIALLRPHLIVCLGATAAQALLGRDFRVTRQRGQLVASPLAPHVVATIH
PSAILRQRSHEDRQREMDAFIADLRIAAGLIAPGK
>Tbd_1496 putative helicase ATPase
MCPQDLFSTEPAAAPAPDPHAPLAERLRPRTLDDVVGQSHLLGPGKPLRL
AFDSGKLHSMILWGPPGVGKTTLARLTAQAFGADFIAISAVLSGVKDIRE
AVERARMNQKLGRATILFVDEVHRFNKSQQDAFLPHVESGLFTFIGATTE
NPSFEVVGALLSRAQVYVLKSLTPDELGRLMQRALQELPSLKLADGVDKL
LAAYADGDARKLLNLLEQLDTAARTAQVEEADAAFVENALAQSLRRFDKG
GEAFYDQISALHKSVRGSDPDASLYWLVRMLDGGADPRYLGRRLVRMASE
DIGLADPRALRLALDAVETYERLGSPEGELALAEACLYLACAPKSNAAYV
AYNAARAFVEANPSNDVPIHLRNAPTKLMKELGYGRAYRYAHDEPEAYAA
GERYFPDDIAEQQFYEPTPRGLEGKIAEKLAHLRELDDEAEK
>Tbd_0002 DNA polymerase III, beta chain
MLLIQSERNALLSALSAVVGVVERRHTLPILSNLLLEKKAGTLTLLATDL
ELQVSTRLEAQGGDDFAITIAARKLFDIVRALPDSASVKLDTKDSQVVVS
AGKSRFTLQTLPAADFPRVETGAGVGTVVRLPQKTLKRLLQLVQFAMASQ
DIRYYLNGMLLVLDGQQLRVVATDGHRLSYAETTLDAPTDAQEVIIPRKT
VIELSKLLSDSDEPVELRIGSNQVTIMLPGTELVTKVVDGKFPDYQRVIP
ANQPRHLKANRQTVVQALQRAAILSNEKFRGVRLVMSDNTLGIVCNNNEQ
EEAADEIEVSYNGDPLDVGFNVTYLLDGLGAVNTDEITLSLGDANSSMLL
TSEGEPGFKYVVMPMRI
>Tbd_0829 conserved hypothetical protein
MLWLALHFPALSLEVFTRGSASALPLAVVEKQGNRTWVIARNDPAAERGV
RPGMAASAAQALADELVVRQRDPGDEQAALTGLAAWAGRFTPSVSLQAPD
GLLLEVGTCLTLHRGLDNLRARVREGVDAMAYSATSACAPTALGAWLLAQ
AGEETAVDANALEARLARLPVGLLDLSPDTRESLDLVGAHTLGDCLKLPR
AGLARRYGQGLLDQLDRALGRLPEPRAFFAPPPRFERRLELPAPVEHAEA
LLFVARRLLPELEGYLALRQAGVQALEYVCRHEGRPDTVLKLGFVKPVRA
ASRMLLLLRETLERTVLPAPVYAVRLRARRLQPLHGSSPDLFQRGEEAGD
GDLLLERLRVRLGRDAVYGVEAVADHRPERAWRRCEAGTRTKPAAAPKRP
LWLLPRPLPCRNGDLVLKGAVERIESGWWDGRDATRDYYVAQDRAGARLW
VYCERATGEWFVHGLFA
>Tbd_0232 conserved hypothetical protein
MENDSPDLVERELDSETVFKGRLMHVKRDRVQLPDGKESTREYIVHPGAV
VVIPVFDNGDLLLERQFRYPLRRDFIELPAGKIDPGEDDLTCAKRELEEE
TGYTASEWREVTTIYPCIGYSDERLAFYLAEGLRDGTHGRDHDEFLEVFR
LPFAEAMQWVRDGRICETKTVIGLFWLEKMLEQGW
>Tbd_1101 DEAD/DEAH box helicase
MTTFAELGLAPDILRALDEMGYVSPTPIQAQVIPRALQGGDILGAAQTGT
GKTAAFALPLIQRLLPFANTSTSPAKHPIRALILTPTRELAIQVEEAIQA
YTKHVPLRSLVVYGGVNINTQIPILKTGVEILVATPGRLLDHVQNKTLML
TQVNTLVLDEADRMLDMGFMPDLRRIVALLPAQRVNMMFSATFPEEIRKL
ADSILSTPTFIEVARNETAVTVTQVVHPVHHERKRQLLAHLIKSRDLRQV
LVFTGTKLGCNRLANELNKAGIHADAIHGDKTQQERIKALDAFKAGTIRV
LVATDVAARGIDIEALPFVVNYDLPHNAEDYVHRIGRTGRAGAKGEAISL
VSEAETRYLKDIERLIGTPLEPVIVPGFEPGAADVPAFESRPARAPRSSD
RGRERAPAKPQPSRDALFDAPYVPREPGQGDAAHAPARPAPTKQVAALFR
SPVKRNVPDQ
>Tbd_0517 RecR protein
MQPAALESLINALRVLPGVGPKSAARMAYHLLQRDRRGAETLAGALGHAL
THLHHCRLCNNFSEAEVCEVCASTRRDRRQLAVVEMPADFNMMEATQSYN
GLYFVLMGRLSPLDGIGPREIHLDRLINRALDGTVEEVILATNFTPEGEA
TAHTIGELLKARGLKVSRLARGVPVGGELEYVDSGTLAQAVRDRRAL
>Tbd_0089 Exonuclease
MNWLAPRFGRKPELSPQQAARLAAWRALPSPRHDLPLDEGRCVVVDVETS
GLDPRRDRLIAIGAVAVSRGKVQLGDSLEIVLQQDTVSEKGNILIHGIGG
TAQRAGVPPADALLAFLEYLGKDPLVAFHVAFDAPMIRRAMKAFLGLDFS
HAWADLAYVAPALYPRLARRRRSLDDWMSEFKIGNYARHNALADALSTAQ
LLLALRKALDARGSASFAGLKDLEYTQRRQSGF
>Tbd_1057 conserved hypothetical protein
MTHAQSFPPIADTHARVLILGSLPGQTSLRMQQYYAQPQNAFWKIMGRLF
GAGADVPYAERYRKLVRSGVALWDVCASAERPGSLDSAIVTSSVVPNDFA
AFLASHPHIHLVCFNGAKAAGLYRRLVLPDLPEAPRLVAYRTLPSTSPAH
AGMRFEEKLAHWSVVKEAAGH
>Tbd_2110 conserved hypothetical protein
MIDREGYRPNVGIILCNARNQVFWGKRVNQHAWQFPQGGINAGETPEQAM
FRELEEEVGLLPGHVRILGRTREWLRYDVPPHWTRRDNRGLYRGQKQIWF
LLRLTGRDCDVSLRASAHPEFDAWRWNEYWVPMEAVVDFKREVYRLALEE
LERYLHRDLRYLRQHTRRPGERREVPFDLQLKP
>Tbd_2247 DNA ligase, ATP-dependent, putative
MAKRDPLSTYTEKRDFSISPEPVSGGQANEAARSFVVQKHWATRLHYDFR
LELDGSMKSWAVPKGPSLDPADKRMAVHVEDHPIAYNAFEGTIPPRQYGA
GKVIIWDKGTWVPLVDPRRGYEEGHLKFELHGHKLQGRWALVRMKGKGEA
KEPWLLIKEKDEHARPAADYSVVDALPDSVADKDDAAAVTKAAAPRRRAG
ETPRPRKARAAKATEKAGAAAVEGAVKSALPATLAPQLATLADKPPDDGD
GWVYEVKFDGYRMLARIDKTVRLFTRNGNDWSHRLAPLVKAIEAAGLRPG
WLDGEVVVPNAAGVPDFQALQNAFDQARADAIVYYVFDLPFYDGYDLRAA
PLVARKALLAGLLDTPHSDALRLSESFDAAPRDILASACKMGLEGVIAKR
RDAPYVSRRSTDWLKLKCTRRQEFVIGGYTDPRGSRPGLGSLLLGVHDAR
GELVYAGNVGTGFDHGTLGDLRKKLAAHARDTSPFVDATGIAGKPHWVDP
KLVAEVSFGEWTKSGRIRHAVFEGLRLDKRAASVVREEPVAAAAAAPRLP
ADLKVSHPERVVDKASGTTKLALIAYYARVAPLMMPHLKARPVSLVRAPD
GVGGSLFFQKHVEASQMRGVKTLPRTLDPGHAPLIEVAAAEGLLTAAQMN
VIEFHTWNARKTRIDKPDRMTFDLDPGEGVGWTTVQESAHLVREFLSQLG
LASFLKTSGGKGLHIVVPLKRLHDWDTVKDFSHAIVRHLARTLPQRFAAK
SGPKNRVGKIFIDYLRNGFGATTVAAWSVRARPGLGVSVPLEWRELDALT
SAAQWTVPNIDSRLEIGNAPWEAYDASSHSLTRAMKTLGHVPKTPA
>Tbd_1679 site-specific recombinase, phage integrase family
MNSSVNAKTRKPTAKARDGVKVEKNIYRRGEYSYQVKMMFGGHAVVETFD
TLPEARAFRDSKKAASVIDPDFKRVLESRIKKTEAASSSLGWLLNRYEAE
VTSGKKSATSERYRIGKLKRYRIAGLSIYTISADDVAEFLGDLKADGVAS
PGQRKYCALLSHVFNTAAKRWRLKVSNPITSLELPAGGKARDRRLEPGEA
DTLLAELDKENAYAGAYARLGIETAMRRGELLGLAWDDVDLKNRVAELRD
TKNGEGRRVPLSRAAIKVLRALPRPHKGPVLPIGASALRGAWGRAKEKVG
IKDLRIHDLRHEATSRLFEKGVFDSMEVASITGHKTLQMLKRYTHLRAED
LAKKLG
>Tbd_1656 transcription-repair coupling factor
MALLFHDPALAVRRASGLAGAADALYLAEAARSVAPLVIVCASAWDANRL
TEELRWFDPALRVCAFPDWETLPYDNFSPHPDLLSERLATLYQISRGEFD
LAVVALSTALHRLAPPSFLAAHTFFLKQKDRLDEAAFRAQMTLGGYSNVN
QVFAPGEFSVRGGLIDLFPMGSAVPYRIDLFDNEIETLRAFDVDTQRSIY
PVNEVRLLPAREFPLDEAGVTRFRQNFRERFEGDPSKSKLYQDVSNGLAP
AGIEYYLPLFFDATATLFDYLPQPTRLVAHGALDAAGQAFWSEAQGRHRL
LAGDKDRPLLPPADLFLATDAFFSRAKSYERFDVAQAGDGLARPLPPISV
DRREAHPVAKLRSFIDGFRGKTLIVAPSAGRRETLHEYLAEHGLDATPCD
GWAGCEAGRERILLTHGPLAEGFVTHDEALAVITETELYAIPPKTRRARE
ARATQIDSLLRDLSELKPGDPVVHAQYGVGQYLGLATMDLGDGDTEFLQL
EYAKGDKLYVPVANLHLISRYSGASEGEVPLHRLGTDQWEKARRRAMQAA
RDTAAELLNLYALRAAREGHAFSFSLHDYEAFAEGFGYEETPDQAAAIAA
VMADMQSGKPMDRLVCGDVGFGKTEVALRAAFMAVMGGYQVAVLVPTTLL
AEQHFNNFSDRFSQWPVKLAELSRFRTAKEQAAALEALKDGRIDIVIGTH
RLIQKDVKFARLGLVILDEEHRFGVRQKEQLKALRAEVDVLTLTATPIPR
TLAMSLEGIRDFSVIATAPQKRLAVKTFVRSFSGGLIREAVLRELKRGGQ
VYFLHNEVSTIQNMRERLEKLLPEARIRVGHGQMSERELEQVMRDFYQQR
YDILLCTTIIETGIDIPTANTILINRADKFGLAQLHQLRGRVGRSHHQAF
AYLLVEEDRTLTPQAKKRLEAIQLMEELGSGFHLARHDLEIRGAGEVLGE
KQSGEILEVGFSLYNDMLAGAVASLKAGKEPDMSQPLDVVSEINLHLPAL
LPADYCPDVHERLVLYKRLASCQTPDDLTAMQEELVDRFGELPDTTRALL
AVHRLRMATRAYGIARLDVSGEGMSVQFVPSPPVDPGRIIALIQGKAGYK
LAGPDRLKLSVSLPDLARRVGAVNAFLAALGPPVGDSLSSATHHSS
>Tbd_2436 3-methyladenine DNA glycosylase II
MTARPPDYWHAACSELTAADPVMAGLIARYPDCVLGNRGDPFQTLARAIV
GQQISVKAADSIWARFAALMEAVAPARLVALDRDTLATCGLSRRKVEYLV
DLAGHFIDGRVEPSRWKRMDDEDVIAELVDVRGIGRWTAEMFLIFNLQRP
DVWPVDDIGLQKAVALHYLEGVRPTPKVLRAHGERHAPWRTVATWYLWRS
LDPAVVQY
>Tbd_0830 conserved hypothetical protein
MSAALESVLQHPGIWRGKQLAQASEETLSTGFAELDAELPGGGWPRGTLT
EILLEREGIGELRLLLPALARVSGQSAWLAWVAPPHVPYAPALAASGIRL
ERLLIARPQSPADAWWTAEQALRSGACGAVLNWLEMPDEKRMRRLQLGAE
SGRSWGVLFRSAAAAQERSPAGLRLRLEPRPDGLAVHILKRRGNPLGRPL
HLDLRPAGSGPASTLSTGPARKTASHAS
>Tbd_1766 Competence protein ComEA
MKLARNLLVLAGLLAFPAFAAVNINTATQSELEAIRGVGPAKAKAIISYR
DANGAFKSVQELDKVKGFGKASVEKLQGELTVGAPGTKQ
>Tbd_1682 nuclease (SNase-like)
MRAALVAVLLAASSAALADFSGTVVRIVDGDTLDVLVQNRPVRVRLAQID
APERRQAYGTRARQALSAMVFRRVVTVSDAGADHYGRRLGTVFVAGMNIN
AAMVDRGMAWAYRQYLRDRSLIGLEQQARAERRGLWNDPAPVTPWFFRAH
PFP
>Tbd_0631 hypothetical protein
MTPPAPRPPKRRALIASIAINVVLALLAGGLVLYAFMLNVDLGDVKRRLS
KEVETRQQTERYLIETRNKLTESVREIEQLKAQLAYKESDYQAGIAVKPA
LPVVVGFRSSMLGKGLVAVLENTSDRYLTVMLSARNPTLAQAKRFQLDLE
PRSRVDFGHFEGWEFASGDEIALFRDEFRPIRLTVP
>Tbd_0971 conserved hypothetical protein
MAAFAHRQPMHPTLVFDIETIPDLAGFAAVHGIDESALPQAELAEMALLA
RRQKTGSDFMPHHLHRIVAISCVLRSGDQLRVWSLGENDSGEAELIHRFY
DGIERYTPQLVSWNGGGFDLPVLHYRSLSHGVAAPRYWDWGDDDKEFKWN
NYLGRYHTRHLDLMDVLAMYQPRASAPLDQMAKLCGFPGKLGMDGSKVLE
TFQNGDIESIRNYCETDVMNTWLVYLRFQKIRGTLSEAAYLAEIALARAT
VEAHPAAHWREFLAAWA
>Tbd_1966 conserved hypothetical protein
MSGASHTRGQVFHYHTPNAILRPMARPLRLELAGGLYHITSRGDGREDIY
RTDTDRTTWLMVVGQVCQRFNWVCHAWCQMDNHYHLLIETPEANLSKGMR
QLNGVYTQSFNRAHGRVGHVFQGRYKAILVERDSYLLELARYIVLNPLRA
AMVKRLEAWPWSSYFATCGQTDAPDWLHTEWILAQFGRQRSGAIRKYVEF
VHQGARLPSVWTQLQGQIYLGSESFVRNMQALIEKKPALDEIPRAQRRAL
TQPLADFERRHDRNEAIARAYLSGQHTMAAIAAHFGVHYTTVSRLVKAYE
KTAGG
>Tbd_1013 integration host factor, alpha subunit
MTTLTKADLAELLFEKVGLNKREAKDVVESFFDEIRLALEKGDIVKLSGF
GNFQCREKPQRPGRNPKTGEEMPISARRVVTFHASQKLKSQVEGARIGTP
SQE
>Tbd_1663 ribonuclease HI
MTADIIYIYSDGACKGNPGAGGWGALLVAGGHRKEISGGEPNTTNNRMEM
TAVIRALELLKRPSTVEVHTDSQYVQKGVSEWLPGWKRRNWRTADGKPVK
NQDLWQQLDALSQQHRIVWKWVRGHAGHPENERADVLANQGVLQARQY
>Tbd_0579 putative DNA polymerase III chi subunit
MTEIIFYTFAEDRLDVARRVAAKAYGQGKQVMIYAPDAAVAGAVDRMLWT
TPALGFVPHARDSDALAAETPVLIGADAGALRHADVMINLDSAQPPAFGR
FERLVEIVGTDDAEREQGRARYRFYQSRGYALKTHDLRQQSEG
>Tbd_1159 MutS 1 protein
MSIAPAAHTPMMQQYLGIKAQHPDMLLFYRMGDFYELFFEDAEKAARLLN
ITLTTRGASAGSPIKMAGVPYHSAEQYLARLLKLGESVVIAEQVGDPAAS
KGPVERRVSRVVTPGTLTDAGLLDETRDALIMAIAVAGDVLGVAWLNLAA
GRFQVTELDRTALPALLARVRPAEILAHEHLDLAADCPVRRLDAWQFDAD
GASKRLARQFGSCDLQGFGVAEMHCAIAAAGALLGYIETTQRTALPHLLS
IRAERDSDFVLLDAATRRNLELTETLRGDAAPTLRSVLDTTCSGMGTRLL
RHWLHHPLRDRAAVAARRDAIGVLAAAPDSAARLADLLKRCADVERIGGR
IALKNARPRDLSGLRDTLALLPELAAALPTDGARLAALRDAVAATPDVHA
LLVRAIQPEPASVLREGGVIADGYDAELDELRALTRDAGAFLLELETRER
ARSGIATLKVEYNKVHGFYIEVGRAQAERVPDDYRRRQTLKNVERYLTPE
LKAFEDKALSAQERALAREKALFEALLDTLIPHVPNLLSIASALAEIDVL
ASQAERASTLRLCAPEFSDDPCIVIRGGRHPVVEAQVEHFIPNDVVLNRT
RQMLLITGPNMGGKSTYMRQVALITLMACCGLWVPAASARIGAIDQIFTR
IGASDDLAGGRSTFMVEMTETANILHSATADSLVLLDEIGRGTSTFDGLA
LAWAVARHLVSATRAFTLFATHYFELTQLAQEYRQLANVHLDAKEHGADL
VFLHAVEDGPASQSYGIQVARLAGVPGPVIHAARRRLRELEDAQLQPGPQ
GDLFAAHLPRDEAPPHPALDQLRELDPDTLTPKAALDMLYALKALTDSEP
>Tbd_2084 Recombination protein O, RecO
MPASRSLGMSSDARVNNESGFILHTYPFKETSVVAEVFTRAHGRVALIAR
GARRPASALRGLMQPFSPLLLSWFGKADLKTLHAAEWQGGLVAPQGRALM
CGFYLNELLLRLLARGDAHERLYDRYVETLDQLARSAAASDAERATAFER
ILRRFEKNLLSEIGYGATFDVEAGGAAIEPGAAYVFQPERGALRAAGQPG
CPVSGQTLLDLAGDSFERLATLGEAKALMRALINHTLGTKPLYTRQLLRE
LTELNP
>Tbd_0948 DNA gyrase, subunit A
MEQFAKETLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLY
AMNELGNDWNKAYKKSARVVGDVIGKYHPHGDTAVYDTMVRMAQDFSLRY
PLIDGQGNFGSVDGDNAAAMRYTEVRMARIAHELLADLDKETVDFGPNYD
GSEQEPLVLPTKIPNLLINGSSGIAVGMATNIPPHNLTDICNALFALLDA
PATDIESLISIVQAPDFPTAGIIYGLSGVRDGYRTGRGRVVMRATCHVED
LDKSGGKQAIIIDELPYQVNKANLLIRIGELVRDKQIDGIADLRDESDKS
GMRVYIELKRGENADVVLNNLYKQTQMQDTFGMNMVALIDGQPRLLNLKE
MLDAFLRHRREVVTRRTVFDLRKARERGHILEGLAVALANVDEIVELIKS
SETPAIAKERLLGRAWKSAMVEEMLARIDPEYSRPVNMGPEFGLHADGYH
LSEIQAQRILEMQLQRLTNLESDKILAEYKEIMAKIADLLDILANPARIT
QIIREELTQVRDQFGDGRRSTIVENAQDMSMEDLIKPEEMVVTLSHGGYM
KSQPLDDYRAQKRGGRGKQAAGTKDEDFIEKMFVANTHDYILCFSNRGRL
YWLKVYNVPQGGRAARGKPIVNLLPLEDGEKISALLPVKTFDDEHYVFMA
TANGIVKKTPLSEFSRPRTAGIIAVGLDDGDVLCGASITDGRHDVMLFSD
SGKAVRFDENDVRPMGRAARGVIGMKLAKGAKLISLLVAEDENDFVLTAT
ENGYGKRTPIAEYTRHARATQGMIAIQTSERNGKVVAANLVKADDEIMLI
TTGGVLIRTRVKEIRAMSRATQGVTLINLDKGEKLISLEKVAETDNEEE
>Tbd_0997 helicase c2
MSDLTHFFSPEGACAAVLPGWRARPQQLAMAEAVERAIAGNLTLLAEAGT
GTGKTLAYLIPALRSGGKVVISTGTKALQDQLFHRDLPAARRALKSPVKV
ALLKGRANYVCHHHLQRNLADGRFAHRDDAAWLQKIARFAEASASGDRAE
AEGIPEDATAWQYAVSTRDTCLGSECAHFKDCFVMAARKAALDAEVVVVN
HHLFFADLWLKDEGVAELLPACNTVILDEAHQLAETAAQFFGETLSTAQL
LDLAGDTKRLAAVKAGDFPALRRAAEDLAKAARDLRLALPQNPLKSTLAE
IGRHEKWPDALAGLSTALGAARKLLETQAERDADLKNCHERAEALAATLD
RWRRDDEPDAPRVRWLETTMSSLLLHATPLSVGSLFGAKLTERAQAWILT
SATLSVGGDFSHLKTRLGIEEAETLCVDSPFDYPRQGVLYVPPNLPAPNT
PSFTEAVVDAALPVLEISQGRAFILFTSLRALEKARELLAAAFTFRGWAF
PLLVQGEAPKNELLARFQQSGNAVLLGSQSFWEGVDMPGDVLSVVIIDKL
PFQPPDDPVVAARIAHLEKSGGKPFMDYQLPHAAISLKQGAGRLIRTETD
RGVLMICDTRLAEKPYGRLLLNALPAMTRTRKLEVVERFFCGA
>Tbd_0469 ATP-dependent DNA helicase RecG
MKTASPFSFPVSPALAAKLAKLGLKRDSDLILHLPLRWEDETRITPIGEL
LPGQTAQVQACVREAKVTYRPRRMLTLIVEDDSGVLGVRFLHFYPSHLKA
FQAGARFRFNGEVRGGFLGLEMVHPRFAKADDDTPLPAGLTPVYPTTAGL
GQASLRKLIERALAAPIDETLPPEWREELGLAELESSIRLLHQPPPGCAQ
HALESRAHPAWQRLAFDELLAQQLSLATSRQAREARTTLPLPHRRRLTAA
FVDTLAFELTAAQARAWQEISTDLAAPHPMRRLLQGDVGSGKTVVAALAC
LQAVENGMQAAFMAPTEILAEQHYRKLAPTLAALGVRSGWVSGSQRRAER
EAAWRAIAAGEADLAFGTHALFQEAGNFCRLGLVVVDEQHRFGVGQRLAL
MGKGTEPHQLMMSATPIPRTLAMSFFADLDVSAIDELPPGRTPIVTKLVS
AARRDEVLARVRDACVGGGQAYWVCPLIEESEKLQLQTAEDTYGTLVEQL
PGLRIGLVHGRLKAEDKQSVMAAFQSHEIDLLVATTVIEVGVDVPNAALM
VIEHAERMGLAQLHQLRGRVGRGARESVCVLLYETPLSELARARLKVIFE
HSDGFEIARQDLLLRGPGELLGQRQSGLPMLRFADLERDVALLERARDLA
QRCLRERPEVAARHVERWLGSRQAYSGS
>Tbd_0365 hypothetical protein
MGRKGEFEAGALSVPWSPGAKSPHVSTRQYARIVHRWVAAIGLDSTVYGT
HTMRRTKATLICKRTKNLRAIPLLLGHTKLESTVRYLGIEVDDALEISEQ
TEI
>Tbd_1364 conserved hypothetical protein
MPNMSPQFELFTADDAPEPRQPLPDGFRYQPDLIERAEETALVAQLRELP
FEAFEFHGYTGRRRVVSFGWRYDFGARSLRKAAEIPAFLLPLRSIAAAFA
DLPAPALQQALVTEYSPGAAIGWHRDKGVFGQIVGVSLLAPCVFRFRHAT
GKKWERVNLIAAPRSAYLLTGASRSIWEHSIAPVKALRYAITFRSLRED
>Tbd_1568 Excinuclease ABC, B subunit
MFVTFPDSPFRLFQPFPPAGDQPTAIARLIEGIDDGLSYQTLLGVTGSGK
TYTMANVIARAGRPALIMAPNKTLAAQLYAEMREFFPENAVEYFVSYYDY
YQPEAYVPARDLFIEKDSSINEHIEQMRLSATKSLLERRDTVIVCTVSAI
YGIGDPSDYHSMILLLRQNDKMTQREVIARLTQMQYDRNDVDFKRGVFRV
RGDVIDIFPAEHAETAIRVELFDDVVETLHLFDPLTGQILQKVSRFTVFP
SSHYVTPRETTLRAIEAIKVELRERLDWYYANNKLVEAQRLEQRTRFDLE
MMVELGFCKGIENYSRHLSGRKAGEPPPTLIDYLAKDALMFIDESHVTVT
QVGGMYKGDRSRKENLVDYGFRLPSALDNRPLKFEEFEALMPQTVFVSAT
PAKYEAEHAGQVVEQLVRPTGLIDPIVEVRPVTTQVDDLMSEVKKRVAVG
ERVLVTTLTKRMAEDLTDYLAEHGVKVRYLHSDIDTVERVEIIRDLRLGE
FDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARHL
NGTAILYADRITDSMQRAIGETERRRAKQIAFNTEHGITPRGVVKRIKDI
IDGVYDADASRQELKAAQTAAEYKVMDEKSLTKRVKKIEKEMQDAAKNLE
FEKAAVLRDQLKELKALLFGVEERE
>Tbd_1540 TatD-related deoxyribonuclease
MLTHRMYIDSHCHINFPELAGRLPEVFDLMAQNAVSHALCIGVELEKFPK
ILALAEAHPNVYASVGVHPDHEDCTEPSVEGLVALADHAKVVAIGETGLD
YFRLTGDLEWQRERFRTHIRAARQCRKPLVIHTRSAADDTLQIMREENAG
EAGGVMHCFTESLAVAEAAVDLGFYISFSGIVTFKNAAALREVAAAIPLE
RMLIETDSPYLAPVPHRGKTNEPGFVKHVAEEIARVRGIPVEAVGAATSE
NFFRLFASARPA
>Tbd_0001 chromosomal replication initiator protein, DnaA
MLRSAPCHPNMDSFWDLCQERFRANLTQQQFSTWIKPLVFDDGGDEVRIL
APNHFVMDWVREKFAEHIDSWAQEFYARPVAISYALGKKPAPARAAPAAP
TANPAEPAAPAAPAPAQVGMRINPGFTFDNFVSGRANQLARAAALQIAEN
PGVAYNPLFVYGGVGLGKTHLLQAIGNTVRQTNPAARISYIHANDYVDDV
VKAYLNKQFDDLKRRYMSLDLLLIDDIQFLAKKDRTQEEFFYVFNSLIEN
KKQIVITCDTFPKEISGLDDRLKSRFAWGLTVAVEPPELEMRVAILLAKA
RAESVTLDENVAFFIAKQVRSNVRELEGALKRVIAFSRFHEKPITMELVK
EALRDLIASTSRMVSIENIQKTVADFYKIKVADMFSKKRTRNLARPRQIA
MALAKELTNQSLPEIGESFGGRDHTTVIHACRKVAELRETEADIGRDYLV
LLQTLTG
>Tbd_2101 DnaB helicase
MAAIHSLTSTSDPQLAQMRLPPHSLEAEQAVLGGLLLDNGAWDRIGDVAS
ESDFYRQDHRQILRAIVQQIAENRPADAVTVSEALQSMGQLESVGGLAYI
VALASNTPSAANIRRYAEIVRERAVMRRLAEVATGIADTAYAPAGRSASQ
LLDEAEAKVFEIAESGSRGQAGFTEIKPLLKEVVERIDELYHRDNDSGIT
GVPTGFHDLDQKTSGLQPGDLVIVAGRPSMGKTAFSINIAENVALDTGLP
VAVFSMEMGGTQLVMRMIGSVGRLDQHRLRTGKLGEDDWQRLTYALGKLN
EAPVYIDESPGLNVLELRARARRLMRQCGKLGLIVIDYLQLMAGSGGGEN
RATEISEISRALKGLAKELHVPVIALSQLNRGLEQRPNKRPVMSDLRESG
AIEQDADVILFIYRDEVYNPDTQDKGTAEIIISKQRNGPIGTVRLAFLGE
YTRFETLAQPGSY
>Tbd_0928 transposase InsF for insertion sequence IS3A/B/C/D/E/fA
MLGLIRASFEESQGIYGAPRVFLDLREAGETCSKHRVARLMKENGIRAKG
GYRTRRYVAGGKTAELIPNLVKRNFDVSQPNRVWVTDITYVRTWQGWLYL
AVVLDLFSRKVIGWATRQSIHRALVLDALLIAVRQRAPDGTIVHSDQGSQ
YGSDDWRRFCRSNGLWPSMSRRGNCWDNAVAESFFSSLKKERIKKRIYNT
RQQATEDIADYIDDFYNRTRRHKHLSGVSPEQFEAAATR
>Tbd_2377 methylated-DNA-(protein)-cysteineS-methyltransfe rase
MPAYDAVLPAPMCRLGARFTGDALTRLDFLPADAEVSSGIDSRARELSVQ
LEAYWQDPGHVFDLFYVPLGTPFQLRVWHALMRIPAGRPTTYGSLAARLG
TAPRAVGQACGANPLPILIPCHRVVAARGVGGFMHADSGMPLDVKLSLLA
HERRAD
>Tbd_1306 ATP-dependent DNA helicase
MSETAVVPGQQPPALPPSSYLSRLNPEQRRAVEHDVAGDACAGPLLVIAG
AGSGKTNVLAHRVAHLVAHGADPAAILLLTFSRRAADEMVRRVERILRQV
AAGRPRLAGAKLAWAGTFHSIGARLLREYAPRIGLDPAFTIHDREDSADL
LNLVRHELGLADTGKRFPRKNTCLAIYSAAVNTLAPLGDVLQRRYPWCVE
WEDELKRLFLAYVEAKQAQHVLDYDDLLLYWGQIAGEPTLAREMGARFSH
ILVDEYQDTNALQASIVRALKPDGRGVTVVGDDAQSIYAFRGATVRNILD
FPGQFAPPARVVTLERNYRSTQPILAAANGVIARASEGYAKSLWSERESS
ERPQLVSVRDEADQAAFVVEEVLARREAGIALKAQAVLFRAAQHSATLEI
ELNRRQVPFVKFGGLKFLEAAHIKDVLAVLRWHENPRDRVAGFRVLQLMP
GIGPKTAGQVLDGLAQVHDVRMALQEARVPPAAAHAWDDFLGLVAALAQP
GATWPAELETIGSWYAPHLERLYDDAAVRQGDISQLEQIARTYPSRQRFL
TELTLDPPDATSDEAGVPLRDEDYLILSTIHSAKGQEWAAVYLLNAVDGC
IPSDLATGSPQEIEEERRLLYVALTRAKDHLQVVVPQRFYVTQQSGYGDR
HVYAGRTRFIPPGMSELFDARVWPVRATETAPACAPPPEVVEVLSRMKAM
WR
>Tbd_2005 probable cp4-like integrase protein
MRDCQKSHTVTRKERAVALTDTAVKKAKPGDKPYKMADEKGLYLLVNQAG
KYWRMDYRFLGKRKTLALGVYSDVSLARARQKRDDARAMLADGTDPGEQR
KETKRANQAAQANSFEAVAREWHAMKLKRKWTQSTADKTMAQLEAYVFPE
MGHLPIASVKASQLLAMLRKVENRGIAYTAVRLREVCGQIFRYGVATGRA
EDNPAAHLLGALHKPEVNHRPAITDRRGFGAFLRDLREATGYDAVTRHAA
YFALLTFVRAQEFRYAKWEEIDWQAKEWKVPAKRMKTGKALPAHTVPLSQ
QALALLTELKNLTGHSPYLFPKVKGYGDAEVISENTVGKMLNKMGYQGRQ
CVHGFRASARSILSEQGWSREAMERQLDHKETDSTVAAYARSEHLPERRN
MMQAWADTCDALETGAEIILLPRTA
>Tbd_0436 Excinuclease ABC, A subunit
MEFIRIRGARTHNLKNVNLDLPRDKLVVITGLSGSGKSSLAFDTLYAEGQ
RRYVESLSAYARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGT
VTEIHDYLRLLYARVGDPQCPEHGITLAAQTVSQMVDAVLALPEDTKLMI
LAPLVVGRKGENLELFAELRAQGFVRVRVDGKVHEIDAVPKLDKNKKHTI
EVVVDRLKVRPDAKQRLAESFETALRHADGRALAVEMDSGEEHLFSAKFA
CPVCSYALPELEPRLFSFNNPMGACETCDGLGSITFFDPARVVAFPHLSL
ASGAIKGWDKRNQFFYMMLQSLALHYGFDLDTPWDALPARIREVILNGSG
KEAIAFQTLAPRGGFTTKRYPFEGVLANMERRYHESDSMAVREELAKYQN
NKPCPACDGTRLREEARHVMVGGAPIYRVSALPLKQVQAFFAGLELDGQR
AQIADKIVKEIIARVGFLNNVGLDYLSLDRSADTLSGGEAQRIRLASQIG
SGLTGVMYVLDEPSIGLHQRDNDRLLATLKHLRDIGNSVLVVEHDEDAIR
AADYVVDMGPGAGVHGGEVVAEGSPEEIRLSADSLTGQYLSGRLRIDIPK
KRRRADPERQLVVTNARGNNLKNVTMRLPVGLFVCITGVSGSGKSTLIND
TLYAAVARHLYGSSTEPAPHDEIQGLEYFDKVINVDQSPIGRTPRSNPAT
YTGLFTPIRELFAGVPEARARGYGPGRFSFNVKGGRCEACQGDGVIKVEM
HFLPDIYVPCDVCHGARYNRETLEVQYKGKTIRDILEMTIEQAHEFFAAV
PVVSRKLQTLLDVGLGYIRLGQSATTLSGGEAQRVKLALELSKRDTGRTL
YILDEPTTGLHFADIDLLLKVLQRLSEAGNSVVVIEHNLDVIKTADWLID
LGPEGGAGGGLIIAEGPPEAVADNPASHTGQYLQPVLSRR
>Tbd_1700 Serine/Threonine protein kinase
MNIGRYEIIDGIGQGAMGTVYRARDPLIERTVAIKTVPIAQLQAEGADAE
SRFLREAQSAGRLSHPNIVTIYDVGEADGIAYIAMEYLPGATLRDLMNKG
PMPLDLVLDTALQMLEALAFAHEHGVIHRDIKPANVVVVGHRGRIKLTDF
GIAHLANSGQTQLGQMLGSPRYMSPEQAMGREVNGRSDIFSLGAVLYEML
TGRYAFDGDSLPTIVYRVIHDPPAPIASLRPQIPPALVTLVGQMLNKNPA
ARPDARTLVSAFHGLMPTVPQRLQAACGKDVSPVLRVLAFTAPIGVFLLI
GVSVIVIERFLGLPGTSGPPQARAPAAAQVASVGPPPPALPELAPNDRAA
PPDRATDENGASAPATDAYLEGLDRKRVELRIKRAELLLKYTRQHPDVVQ
IDAQLDRLRAERNRHLRQLQKQAAD
>Tbd_0936 adenine specific DNA methylase MOD
MSKQKLELTWIGKEKRPKLEPRILLEDPEKSYHAKHRVSDNDIFDNRLIF
GDNLLALKALEQEFSGKVKCVFIDPPYNTGSAFAQYDDGLEHSIWLGLVR
DRLEIIRRLLSDDGSLWISIDDNEAHYLKVLCDEIFGRKCFVTSFIWKKV
DSPNDNKGALSPDHEYILCYVKNPDSIYFRPKQDESILNAYRQPDAESDR
PYRDRLLKKNGKNSLRIDRPSMYFPIKGPDGVDVYPIHDDGQEARWAMGK
KGVDELIAKGELVWKQRESGGVLRWVPYTREYAPDAPTRPWPTIWSDLHT
TRQTKAHQRSVLEGVQAFETPKPEDLVSRILSISTNPGDWVLDSFAGSGT
TGAAAHKMGRRWIMVELEETCHTHIIPRLRKVIDGEDKGGVTEALSWHGG
GGFRYYRLAPSLIVNDRWGNPVINPEYNAAQLAEALAKLEGFNYAPSETH
WWQHGHSSERDFIYVTTQNLSAEQLQALADEVGPERSLLVCCAAFHGVTA
AKAAERWPNLTLKKIPKMVLARCHWGRDDYSLNVTNLPMAEIEKSEPAPP
GNSFKNTKSRKAALANAGQGGLFGENE
>Tbd_1058 hypothetical protein
MKRWNVKYPRRFDLDSDDDYLRWRDEKLAAYPGHVGDLVVELGDMTAPTA
AEKAKILETVERANMCVFTAGSAELEMASLLALGAQLGVSRTDKSARHAQ
SDELTDSGILNRAVPFSTRHCNWHTDATYYGSNHTIQALFLLCKRPALEG
GSNKVLDHEVLYIHLRDKAPEALDVLMNRDCFNYRNPASGEIDLHRGGKV
FWTNPYGPLCHRFSFRKTDMAWSEDSDVAAARQVLESLISDESAQVIEGR
LESGMGLISNNVLHTREKLVDSDDAAHKRLLFRARFYDRVNPELVN
>Tbd_0943 putative integrase prophage protein
MLTDMKVRQAKPGPNVQKLSDSQGLFLHISPSGGKWWRLAYRYTGKQKLL
SLGTYPAVSLADARQRRDEAKKLLAHGVDPAENRKATKQARQDRASNSFE
AVAREWHAKFSSTWSANHSDRIIRRLENDIFPWLGDKPIADITPPTLLAA
LRRIEERGAVETAHRAMQNCGQVFRYSVATGRAERDPSQDLKGALPPVAK
SHFKSITDPVQIGVLLRNIDGYSGGPVVRSALRLAPLIFVRPGELRHAEW
AHFDLGAAEWRYTVSKTNTEHIVPLSRQAISVLEELQPLTGHKRYVFPAN
RGEGRPMSENTVNAALRSLGYDKETLTGHGFRAMARTLLDEVLGFRPDII
EHQLAHAVRDPLGRAYNRTTHLPERRKMMQGWADYLDELKAGATVIRLYG
>Tbd_2021 Endonuclease III/Nth
MNADKRREIFRRLREANPHPTTELEYATPFELLVAVVLSAQSTDKGVNRA
TRVLFPIANTPAAIHALGEAGLADYIKTIGLYKSKARHLIAASRMLLDLH
GGEVPADRAALEALPGVGRKTANVILNTAFGQATMAVDTHIFRVANRTGL
APGKTVLEVEKKLVKTTPAEFLVDAHHWLILHGRYVCQARRPKCAECIIV
DLCEFKAKTLPAAPRASARKRPATEAADV