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2024-05-05 15:44:04

Gene list

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COG category: Replication, recombination and repair
Organism: Desulfovibrio desulfuricans G20, G20

Number of genes found: 187

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Desulfovibrio desulfuricans G20, G20
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Dde_1976 DNA mismatch repair protein MutSchromosome CDS2020900 2715 + 0.574954
NA Dde_0745 putative transposase proteinchromosome CDS772196 1329 + 0.597442
NA Dde_2093 DNA ligase, NAD-dependentchromosome CDS2141016 2118 - 0.580264
NA Dde_0714 transposase, putativechromosome CDS732543 924 + 0.593074
NA Dde_3499 ATP-dependent DNA helicase, UvrD/REP familychromosome CDS3456951 3270 - 0.609174
NA Dde_0905 conserved hypothetical proteinchromosome CDS929538 477 + 0.540881
NA Dde_0341 DEAD/DEAH box helicase-likechromosome CDS330553 1590 - 0.606289
NA Dde_1914 integrase/recombinasechromosome CDS1965898 915 + 0.668852
NA Dde_2849 ISPg7, transposasechromosome CDS2835566 1317 - 0.555809
NA Dde_1297 conserved hypothetical proteinchromosome CDS1316858 288 + 0.555556
NA Dde_0551 exodeoxyribonuclease IIIchromosome CDS571281 1011 + 0.557863
NA Dde_1721 transposase, IS5 family, truncationchromosome CDS1778655 1356 + 0.542035
NA Dde_3701 DNA-3-methyladenine glycosylase Ichromosome CDS3663587 594 + 0.614478
NA Dde_3430 putative transcriptional regulatorchromosome CDS3394339 255 - 0.541176
NA Dde_3361 transposasechromosome CDS3333815 738 - 0.573171
NA Dde_0486 transposase, IS5 family, truncationchromosome CDS494973 1356 - 0.542035
NA Dde_0779 DEAD/DEAH box helicase-likechromosome CDS799703 1998 + 0.472973
NA Dde_2752 histone-like DNA-binding proteinchromosome CDS2753210 276 - 0.565217
NA Dde_2354 nuclease (SNase-like)chromosome CDS2377114 495 + 0.646465
NA Dde_1384 conserved hypothetical proteinchromosome CDS1403155 177 + 0.536723
NA Dde_3623 Ser/Thr protein phosphatase family proteinchromosome CDS3583718 1398 + 0.620172
NA Dde_1743 Adenine specific DNA methylase Mod-likechromosome CDS1800075 1338 - 0.421525
NA Dde_0477 transposase for IS200chromosome CDS487087 411 + 0.416058
NA Dde_3468 serine/threonine protein kinasechromosome CDS3428906 1392 - 0.612787
NA Dde_0869 ISPsy11, transposase OrfBchromosome CDS898656 837 - 0.485066
NA Dde_3748 ISxac3 transposasechromosome CDS3700453 450 - 0.504444
NA Dde_2841 conserved hypothetical proteinchromosome CDS2829425 843 + 0.616845
NA Dde_2988 ISPsy11, transposase OrfBchromosome CDS2968130 837 + 0.485066
NA Dde_1745 transposase-likechromosome CDS1802324 306 - 0.480392
NA Dde_1782 conserved hypothetical proteinchromosome CDS1834501 570 + 0.559649
NA Dde_1944 putative transposase proteinchromosome CDS1993623 1353 - 0.595713
NA Dde_1300 adenine specific DNA methyltransferase, putativechromosome CDS1318669 744 + 0.553763
NA Dde_1435 HhH-GPDchromosome CDS1459539 666 + 0.597598
NA Dde_1545 single-strand binding proteinchromosome CDS1564065 501 + 0.58483
NA Dde_1093 endonuclease-likechromosome CDS1123151 609 - 0.651888
NA Dde_3350 bacteriophage transposase A protein, putativechromosome CDS3326918 2127 + 0.570757
NA Dde_2715 single-stranded-DNA-specific exonuclease RecJchromosome CDS2716779 1707 - 0.618629
NA Dde_1094 Ribonuclease Hchromosome CDS1123753 792 - 0.626263
NA Dde_2987 transposasechromosome CDS2967729 399 + 0.458647
NA Dde_3450 DNA polymerase Ichromosome CDS3409221 2796 + 0.589056
NA Dde_2324 crossover junction endodeoxyribonuclease RuvCchromosome CDS2341446 501 - 0.596806
NA Dde_0106 DNA topoisomerase Ichromosome CDS95374 2244 - 0.575312
NA Dde_2774 hypothetical proteinchromosome CDS2776921 1935 + 0.490439
NA Dde_2908 ATPasechromosome CDS2891909 774 - 0.569767
NA Dde_0514 uracil-DNA glycosylasechromosome CDS522694 702 + 0.64245
NA Dde_0912 integrase/recombinasechromosome CDS939853 915 - 0.67541
NA Dde_2442 DNA repair protein RadCchromosome CDS2463476 678 + 0.60472
NA Dde_0620 hypothetical proteinchromosome CDS639695 846 + 0.502364
NA Dde_1491 endonuclease IIIchromosome CDS1512538 681 + 0.593245
NA Dde_2596 DNA repair protein RecNchromosome CDS2612838 1614 + 0.579926
NA Dde_1233 putative transposase Bchromosome CDS1252419 819 + 0.527473
NA Dde_1567 transposase, IS5 family, truncationchromosome CDS1589054 1356 + 0.542035
NA Dde_2941 ribonuclease HIchromosome CDS2920672 465 - 0.582796
NA Dde_2480 DEAD/DEAH box helicase-likechromosome CDS2499903 1593 - 0.61833
NA Dde_2874 hypothetical proteinchromosome CDS2863643 216 + 0.50463
NA Dde_3423 hypothetical proteinchromosome CDS3384723 771 - 0.586252
NA Dde_2039 transcription-repair coupling factorchromosome CDS2080135 3459 - 0.583984
NA Dde_3364 ISxcd1 transposasechromosome CDS3335977 801 - 0.470662
NA Dde_1921 DNA primase-likechromosome CDS1971583 3312 - 0.631341
NA Dde_0314 Holliday junction resolvase YqgFchromosome CDS304793 435 + 0.572414
NA Dde_2872 transposase-likechromosome CDS2862603 840 - 0.495238
NA Dde_1014 excinuclease ABC, C subunitchromosome CDS1036022 2103 + 0.619116
NA Dde_2725 Helicase RecD/TraAchromosome CDS2726144 2196 - 0.583789
NA Dde_1802 transposase, IS5 family, truncationchromosome CDS1851019 1356 - 0.542035
NA Dde_0452 hypothetical proteinchromosome CDS461877 789 + 0.627376
NA Dde_2373 recA proteinchromosome CDS2396836 1056 + 0.572917
NA Dde_1519 primosomal protein N'chromosome CDS1538932 2472 + 0.60356
NA Dde_1172 ATP-dependent helicase HrpBchromosome CDS1197213 2592 - 0.637731
NA Dde_3398 site-specific recombinase, phage integrase familychromosome CDS3362885 1224 + 0.477124
NA Dde_2906 putative transcriptional regulator, Fis familychromosome CDS2891209 267 + 0.453184
NA Dde_3342 conserved hypothetical proteinchromosome CDS3323331 765 + 0.533333
NA Dde_3548 transposase, IS5 family, truncationchromosome CDS3508876 1356 - 0.542035
NA Dde_1648 putative transposase proteinchromosome CDS1698656 1353 - 0.595713
NA Dde_3621 DNA-directed DNA polymerasechromosome CDS3581837 1158 - 0.618307
NA Dde_3761 ISSod2, transposase OrfAchromosome CDS3711056 267 + 0.52809
NA Dde_0624 putative transposase Bchromosome CDS643576 819 + 0.525031
NA Dde_1564 DEAD/DEAH box helicase-likechromosome CDS1584094 3207 - 0.537574
NA Dde_0998 methylated-DNA--protein-cysteinemethyltransferasechromosome CDS1023661 627 + 0.657097
NA Dde_2032 putative transposase proteinchromosome CDS2071736 1353 + 0.595713
NA Dde_1971 Tyrosine recombinase XerDchromosome CDS2014955 930 + 0.547312
NA Dde_2909 ISGsu6, transposase OrfAchromosome CDS2892682 1029 - 0.555879
NA Dde_1923 conserved hypothetical proteinchromosome CDS1977071 483 - 0.608696
NA Dde_3592 putative transposase proteinchromosome CDS3549114 1353 + 0.595713
NA Dde_0870 transposasechromosome CDS899495 399 - 0.458647
NA Dde_2402 apurinic endonuclease (APN1)chromosome CDS2423710 885 - 0.624859
NA Dde_0179 deoxyribodipyrimidine photolyasechromosome CDS164786 1464 + 0.627049
NA Dde_2202 exodeoxyribonuclease VII, small subunitchromosome CDS2243208 243 - 0.588477
NA Dde_3571 ATP-dependent DNA helicase, UvrD/REP familychromosome CDS3527207 2160 - 0.5875
NA Dde_2441 conserved hypothetical proteinchromosome CDS2462365 975 + 0.619487
NA Dde_3341 conserved hypothetical proteinchromosome CDS3322987 267 + 0.483146
NA Dde_0002 DNA polymerase III, beta subunitchromosome CDS1642 1155 + 0.516017
NA Dde_2196 DNA polymerase III, alpha subunitchromosome CDS2234503 3498 + 0.531447
NA Dde_1748 DEAD/DEAH box helicase-likechromosome CDS1803994 3204 - 0.489388
NA Dde_3464 DNA mismatch repair protein MutLchromosome CDS3423304 2079 + 0.642136
NA Dde_3356 histone-like DNA-binding proteinchromosome CDS3331388 288 + 0.569444
NA Dde_2053 DNA primasechromosome CDS2096628 1731 - 0.546505
NA Dde_0517 histone-like DNA-binding proteinchromosome CDS524929 294 + 0.513605
NA Dde_0741 putative transposase proteinchromosome CDS768863 1329 - 0.597442
NA Dde_2513 putative transposase proteinchromosome CDS2534167 1353 + 0.595713
NA Dde_2204 exodeoxyribonuclease VII, large subunitchromosome CDS2244408 1461 - 0.620808
NA Dde_1718 conserved hypothetical proteinchromosome CDS1776677 1116 - 0.514337
NA Dde_0896 Site-specific recombinasechromosome CDS923367 1584 + 0.543561
NA Dde_1488 conserved hypothetical proteinchromosome CDS1509843 1182 + 0.589679
NA Dde_0047 Elongator protein 3/MiaB/NifBchromosome CDS37589 897 - 0.633222
NA Dde_0177 DNA polymerase III, delta prime subunit, putativechromosome CDS162987 891 + 0.647587
NA Dde_1492 conserved hypothetical proteinchromosome CDS1513218 834 + 0.591127
NA Dde_3406 ATPasechromosome CDS3368632 774 - 0.569767
NA Dde_1289 putative transposase proteinchromosome CDS1307747 1353 - 0.595713
NA Dde_2058 histone-like DNA-binding proteinchromosome CDS2101831 273 - 0.498168
NA Dde_1149 conserved hypothetical proteinchromosome CDS1176671 321 + 0.610592
NA Dde_1735 putative resolvasechromosome CDS1792651 567 - 0.518519
NA Dde_1674 transposasechromosome CDS1726490 399 - 0.458647
NA Dde_0623 conserved hypothetical proteinchromosome CDS643226 288 + 0.559028
NA Dde_2898 ISxac2 transposasechromosome CDS2887478 162 - 0.518519
NA Dde_3402 hypothetical proteinchromosome CDS3366244 165 - 0.515152
NA Dde_1318 DNA topoisomerase IIIchromosome CDS1336747 2418 + 0.58933
NA Dde_1744 transposase-likechromosome CDS1801446 840 - 0.492857
NA Dde_0074 TatD-related deoxyribonucleasechromosome CDS63304 831 - 0.614922
NA Dde_2807 nuclease (SNase-like)chromosome CDS2795600 537 + 0.487896
NA Dde_0004 DNA gyrase, A subunitchromosome CDS5212 2436 + 0.557061
NA Dde_2026 conserved hypothetical proteinchromosome CDS2065889 336 + 0.5625
NA Dde_1587 conserved hypothetical proteinchromosome CDS1611993 2994 - 0.580828
NA Dde_1398 transposase-likechromosome CDS1413699 306 - 0.480392
NA Dde_2859 putative transposase proteinchromosome CDS2847816 1353 + 0.595713
NA Dde_1746 type III restriction system methylasechromosome CDS1802691 522 - 0.396552
NA Dde_0496 hypothetical proteinchromosome CDS503493 729 + 0.59808
NA Dde_1581 DNA processing protein DprA, putativechromosome CDS1606169 1278 + 0.611894
NA Dde_2865 Site-specific recombinase XerD-likechromosome CDS2851683 1254 + 0.520734
NA Dde_3747 ISRSO8-transposase orfB proteinchromosome CDS3700066 360 - 0.533333
NA Dde_2322 Holliday junction DNA helicase RuvBchromosome CDS2339783 966 - 0.583851
NA Dde_0534 putative transposase proteinchromosome CDS541665 1353 + 0.595713
NA Dde_0068 recombination protein RecRchromosome CDS59077 597 + 0.599665
NA Dde_3763 ISxcd1 transposasechromosome CDS3711959 159 + 0.540881
NA Dde_2320 chromosomal replication initiator protein DnaAchromosome CDS2337250 1386 - 0.554113
NA Dde_1524 putative transposase proteinchromosome CDS1544094 1353 - 0.595713
NA Dde_0940 hypothetical proteinchromosome CDS966267 420 + 0.669048
NA Dde_0756 transposase, IS5 family, truncationchromosome CDS781539 1356 - 0.542035
NA Dde_2899 ISSod2, transposase OrfAchromosome CDS2887660 267 - 0.509363
NA Dde_0906 helicase, RecD/TraA familychromosome CDS929969 2223 + 0.529465
NA Dde_2973 DNA-directed DNA polymerasechromosome CDS2955582 1479 - 0.630156
NA Dde_1298 putative transposase Bchromosome CDS1317208 819 + 0.527473
NA Dde_2803 putative resolvasechromosome CDS2792697 567 + 0.522046
NA Dde_0001 chromosomal replication initiator protein DnaAchromosome CDS189 1311 + 0.53013
NA Dde_2054 DNA mismatch repair protein MutS-likechromosome CDS2098386 2316 - 0.575561
NA Dde_1922 helicase, RecD/TraA familychromosome CDS1974891 2097 - 0.623271
NA Dde_1998 ATPasechromosome CDS2041194 1128 + 0.575355
NA Dde_1534 polymerase most proteins contain PALM domain HD hydrolase domain and Zn-ribbon domain-likechromosome CDS1553394 1890 - 0.587302
NA Dde_1799 histone-like DNA-binding proteinchromosome CDS1849273 276 - 0.471014
NA Dde_1991 isopentenyl-diphosphate delta-isomerasechromosome CDS2033636 555 + 0.572973
NA Dde_1899 hypothetical proteinchromosome CDS1950618 573 - 0.577661
NA Dde_2446 ATP-dependent DNA helicase RecQchromosome CDS2467747 2220 + 0.599099
NA Dde_3750 putative transposase Bchromosome CDS3702626 597 - 0.529313
NA Dde_2323 Holliday junction DNA helicase RuvAchromosome CDS2340745 606 - 0.580858
NA Dde_0858 CRISPR-associated protein Cas1chromosome CDS886595 768 - 0.549479
NA Dde_0251 mutator mutT proteinchromosome CDS235047 393 + 0.636132
NA Dde_2486 excinuclease ABC, A subunitchromosome CDS2505290 2781 - 0.581805
NA Dde_1232 conserved hypothetical proteinchromosome CDS1252069 288 + 0.559028
NA Dde_3762 ISxcd1 transposasechromosome CDS3711343 579 + 0.509499
NA Dde_0003 DNA gyrase, B subunitchromosome CDS2797 2394 + 0.550961
NA Dde_0152 DEAD/DEAH box helicase-likechromosome CDS138936 1719 + 0.576498
NA Dde_0125 histone-like DNA-binding proteinchromosome CDS117236 288 - 0.5625
NA Dde_3213 histone-like DNA-binding proteinchromosome CDS3203984 276 - 0.557971
NA Dde_1585 Site-specific recombinase XerD-likechromosome CDS1609661 999 + 0.578579
NA Dde_2096 excinuclease ABC, B subunitchromosome CDS2144920 2049 - 0.560761
NA Dde_2753 conserved hypothetical proteinchromosome CDS2753715 471 + 0.598726
NA Dde_3362 transposase (class V)chromosome CDS3334690 288 - 0.527778
NA Dde_3727 transposase, IS5 family, truncationchromosome CDS3685318 1356 - 0.542035
NA Dde_2897 ISxcd1 transposasechromosome CDS2886839 630 - 0.501587
NA Dde_1588 ATP-dependent DNA helicase, UvrD/REP familychromosome CDS1615004 3204 - 0.595506
NA Dde_3407 ISGsu6, transposase OrfAchromosome CDS3369405 1029 - 0.555879
NA Dde_1155 hypothetical proteinchromosome CDS1181688 450 - 0.584444
NA Dde_0628 DNA polymerase III, epsilon subunitchromosome CDS647281 720 - 0.622222
NA Dde_1397 transposase-likechromosome CDS1412821 840 - 0.492857
NA Dde_1607 transposase, IS5 family, truncationchromosome CDS1638101 1356 + 0.542035
NA Dde_1673 ISPsy11, transposase OrfBchromosome CDS1725651 837 - 0.485066
NA Dde_1935 Site-specific recombinasechromosome CDS1985707 1587 + 0.607435
NA Dde_2051 nuclease (SNase-like)chromosome CDS2094143 687 - 0.561863
NA Dde_0066 DNA-directed DNA polymerasechromosome CDS56972 1734 + 0.618224
NA Dde_0922 Adenine-specific DNA methylase-likechromosome CDS950735 2397 + 0.62161
NA Dde_1409 replicative DNA helicasechromosome CDS1427543 1371 - 0.540481
NA Dde_1361 polymerase most proteins contain PALM domain HD hydrolase domain and Zn-ribbon domain-likechromosome CDS1379567 1962 + 0.590214
NA Dde_2871 transposasechromosome CDS2861203 1269 + 0.532703
NA Dde_3365 ISSod2, transposase OrfAchromosome CDS3336798 267 - 0.441948
NA Dde_3099 methylated-DNA--protein-cysteinemethyltransferasechromosome CDS3088297 612 + 0.578431
NA Dde_0212 A/G-specific adenine glycosylasechromosome CDS193112 1107 + 0.594399
NA Dde_0542 formamidopyrimidine-DNA glycosylasechromosome CDS554443 888 + 0.608108
NA Dde_0618 ISxcd1 transposasechromosome CDS638256 801 - 0.47191