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2024-05-20 00:08:53

Gene list

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COG category: Replication, recombination and repair
Organism: Synechococcus sp. CC9605, CC9605

Number of genes found: 101

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Synechococcus sp. CC9605, CC9605
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA Syncc9605_0148 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS147856 1986 - 0.327291
NA Syncc9605_2243 weak similarity to phage integrase familySubName: Full=Weak similarity to phage integrase family; chromosome CDS2055286 1215 + 0.557202
NA Syncc9605_0492 formamidopyrimidine-DNA glycosylaseRecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase MutM; chromosome CDS481680 837 - 0.594982
NA Syncc9605_1482 NUDIX family proteinSubName: Full=NUDIX family protein; chromosome CDS1382251 432 + 0.634259
NA Syncc9605_1084 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1022601 186 - 0.564516
NA Syncc9605_2068 TatD-related deoxyribonucleaseSubName: Full=TatD-related deoxyribonuclease; chromosome CDS1892142 789 - 0.632446
NA Syncc9605_0384 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS384194 1446 - 0.643845
NA Syncc9605_1411 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1326213 1584 + 0.551136
NA Syncc9605_0597 DNA topoisomerase IRecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; chromosome CDS577798 2700 + 0.621852
NA Syncc9605_2520 DEAD/DEAH box helicase-likeSubName: Full=DEAD/DEAH box helicase-like; chromosome CDS2330541 3198 + 0.654784
NA Syncc9605_0072 DNA polymerase III, delta subunitSubName: Full=DNA polymerase III, delta subunit; chromosome CDS71394 966 - 0.663561
NA Syncc9605_0291 DNA-3-methyladenine glycosylaseRecName: Full=Putative 3-methyladenine DNA glycosylase; EC=3.2.2.-; chromosome CDS295906 681 + 0.61674
NA Syncc9605_2543 replicative DNA helicaseSubName: Full=Replicative DNA helicase; chromosome CDS2360312 1407 + 0.636816
NA Syncc9605_2237 Site-specific recombinase XerD-likeSubName: Full=Site-specific recombinase XerD-like; chromosome CDS2050037 678 - 0.60472
NA Syncc9605_1870 Holliday junction resolvase YqgFRecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; chromosome CDS1699867 477 - 0.702306
NA Syncc9605_0715 phage integrase familySubName: Full=Phage integrase family; chromosome CDS683657 1155 - 0.670996
NA Syncc9605_0104 single-strand binding proteinRecName: Full=Single-stranded DNA-binding protein; chromosome CDS103294 378 - 0.624339
NA Syncc9605_1942 DNA gyrase, A subunitRecName: Full=DNA gyrase subunit A; EC=5.99.1.3; chromosome CDS1761437 2598 - 0.643572
NA Syncc9605_0786 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS750996 972 - 0.515432
NA Syncc9605_1229 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1150493 1221 + 0.570025
NA Syncc9605_0118 Holliday junction DNA helicase RuvBRecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; chromosome CDS115254 1047 + 0.65234
NA Syncc9605_0381 recA proteinRecName: Full=Protein RecA; AltName: Full=Recombinase A; chromosome CDS382369 1125 + 0.601778
NA Syncc9605_2325 exodeoxyribonuclease VII small subunitSubName: Full=Exodeoxyribonuclease VII small subunit; chromosome CDS2133645 270 + 0.555556
NA Syncc9605_0218 probable deoxyribodipyrimidine photolyaseSubName: Full=Probable deoxyribodipyrimidine photolyase; chromosome CDS224889 912 - 0.648026
NA Syncc9605_2092 Histone-like DNA-binding proteinSubName: Full=Histone-like DNA-binding protein; chromosome CDS1916472 276 - 0.576087
NA Syncc9605_1300 transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS1212529 3579 - 0.612462
NA Syncc9605_0865 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS835706 1125 - 0.528889
NA Syncc9605_0038 DEAD/DEAH box helicase-likeSubName: Full=DEAD/DEAH box helicase-like; chromosome CDS36970 1605 + 0.647352
NA Syncc9605_1142 ExonucleaseSubName: Full=Exonuclease; chromosome CDS1073750 843 + 0.635824
NA Syncc9605_1161 Holliday junction DNA helicase RuvARecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; chromosome CDS1093099 645 - 0.539535
NA Syncc9605_1706 possible phage integrase familySubName: Full=Possible phage integrase family; chromosome CDS1562649 1173 - 0.60017
NA Syncc9605_1489 endonuclease IIIRecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; chromosome CDS1387961 654 + 0.642202
NA Syncc9605_1720 possible phage integrase familySubName: Full=Possible phage integrase family; chromosome CDS1576311 1173 - 0.591645
NA Syncc9605_2322 ATP-dependent helicase HrpBSubName: Full=ATP-dependent helicase HrpB; chromosome CDS2129466 2505 + 0.651896
NA Syncc9605_1462 putative ATP-dependent DNA ligaseSubName: Full=Putative ATP-dependent DNA ligase; chromosome CDS1369946 1692 + 0.61052
NA Syncc9605_1802 possible alkylated DNA repair proteinSubName: Full=Possible alkylated DNA repair protein; chromosome CDS1640901 585 + 0.565812
NA Syncc9605_1650 probable exodeoxyribonuclease V, alpha subunit RecDSubName: Full=Probable exodeoxyribonuclease V, alpha subunit RecD; chromosome CDS1517849 1581 - 0.672992
NA Syncc9605_1164 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1095887 285 + 0.403509
NA Syncc9605_0475 putative DNA processing protein (Smf family)SubName: Full=Putative DNA processing protein (Smf family); chromosome CDS462955 1017 + 0.625369
NA Syncc9605_0078 DNA mismatch repair protein MutSRecName: Full=DNA mismatch repair protein MutS; chromosome CDS75614 2712 - 0.675147
NA Syncc9605_2692 DNA repair protein RecNRecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; chromosome CDS2505072 1683 - 0.612002
NA Syncc9605_2196 anchor polypeptide LCMSubName: Full=Anchor polypeptide LCM; chromosome CDS2008904 2952 + 0.612127
NA Syncc9605_2691 excinuclease ABC, A subunitRecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; chromosome CDS2502063 2964 - 0.601552
NA Syncc9605_0495 ATP-dependent DNA helicase, RecQ familySubName: Full=ATP-dependent DNA helicase, RecQ family; chromosome CDS483994 1413 + 0.666667
NA Syncc9605_1419 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1333476 702 + 0.480057
NA Syncc9605_0213 Deoxyribodipyrimidine photolyaseSubName: Full=Deoxyribodipyrimidine photolyase; EC=4.1.99.3; chromosome CDS220618 1434 + 0.636681
NA Syncc9605_2139 RecA-family ATPase-likeSubName: Full=RecA-family ATPase-like; chromosome CDS1958723 1929 - 0.569207
NA Syncc9605_0005 DNA gyrase/topoisomerase IV, subunit ASubName: Full=DNA gyrase/topoisomerase IV, subunit A; chromosome CDS6019 2469 - 0.609964
NA Syncc9605_2571 possible phage integrase familySubName: Full=Possible phage integrase family; chromosome CDS2385705 1278 + 0.564163
NA Syncc9605_0080 excinuclease ABC, B subunitRecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; chromosome CDS78836 2109 + 0.628734
NA Syncc9605_1225 ATP-dependent DNA helicase RecGSubName: Full=ATP-dependent DNA helicase RecG; chromosome CDS1143302 2439 + 0.628126
NA Syncc9605_0803 methylated-DNA--protein-cysteinemethyltransferaseSubName: Full=Methylated-DNA--protein-cysteine methyltransferase; chromosome CDS767471 423 + 0.635934
NA Syncc9605_1947 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1767064 621 + 0.636071
NA Syncc9605_0099 mutator mutT proteinSubName: Full=Mutator mutT protein; chromosome CDS98442 1191 + 0.639798
NA Syncc9605_1363 excinuclease ABC, C subunitRecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; chromosome CDS1277902 1986 - 0.625881
NA Syncc9605_1785 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1625004 1479 + 0.482759
NA Syncc9605_0518 conserved hypothetical proteinSubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS509952 327 - 0.593272
NA Syncc9605_0661 exodeoxyribonuclease IIISubName: Full=Exodeoxyribonuclease III; chromosome CDS634075 867 - 0.608997
NA Syncc9605_0087 DNA gyrase, B subunitRecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome CDS88692 1968 + 0.606199
NA Syncc9605_2250 putative RNA methylase family UPF0020SubName: Full=Putative RNA methylase family UPF0020; chromosome CDS2063650 1143 + 0.632546
NA Syncc9605_1953 Holliday junction resolvase RuvCRecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; chromosome CDS1772607 465 + 0.632258
NA Syncc9605_1651 probable exodeoxyribonuclease V, beta subunit RecBSubName: Full=Probable exodeoxyribonuclease V, beta subunit RecB; chromosome CDS1519426 3681 - 0.666667
NA Syncc9605_0682 primosomal protein N' (replication factor Y)SubName: Full=Primosomal protein N (Replication factor Y); chromosome CDS653009 2250 + 0.646222
NA Syncc9605_1966 DNA polymerase ISubName: Full=DNA polymerase I; EC=2.7.7.7; chromosome CDS1785070 2961 + 0.637285
NA Syncc9605_0212 NUDIX hydrolaseSubName: Full=NUDIX hydrolase; chromosome CDS220058 561 + 0.655971
NA Syncc9605_1979 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1799305 1308 + 0.644495
NA Syncc9605_0781 nuclease (SNase-like)SubName: Full=Nuclease (SNase-like); chromosome CDS744609 345 + 0.582609
NA Syncc9605_2324 exodeoxyribonuclease VII, large subunitRecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit; chromosome CDS2132446 1200 + 0.619167
NA Syncc9605_0782 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS745424 843 + 0.501779
NA Syncc9605_1924 exodeoxyribonuclease VSubName: Full=Exodeoxyribonuclease V; chromosome CDS1745896 1452 - 0.658402
NA Syncc9605_0945 phage integrase familySubName: Full=Phage integrase family; chromosome CDS908947 636 - 0.559748
NA Syncc9605_0708 Deoxyribodipyrimidine photolyaseSubName: Full=Deoxyribodipyrimidine photolyase; EC=4.1.99.3; chromosome CDS678084 1482 + 0.621458
NA Syncc9605_2466 possible ribonuclease HIRecName: Full=Ribonuclease H; Short=RNase H; EC=3.1.26.4; chromosome CDS2272572 759 - 0.628458
NA Syncc9605_2379 DNA polymerase III, delta prime subunitSubName: Full=DNA polymerase III, delta prime subunit; chromosome CDS2192388 945 - 0.651852
NA Syncc9605_1378 Site-specific recombinase XerD-likeSubName: Full=Site-specific recombinase XerD-like; chromosome CDS1293375 1203 - 0.54281
NA Syncc9605_2042 DEAD/DEAH box helicase-likeSubName: Full=DEAD/DEAH box helicase-like; chromosome CDS1863063 2775 - 0.638919
NA Syncc9605_0685 conserved hypothetical proteinSubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS657206 543 - 0.616943
NA Syncc9605_1717 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1573622 576 + 0.576389
NA Syncc9605_0314 Ribonuclease HRecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; chromosome CDS320086 600 + 0.638333
NA Syncc9605_0509 MutS2 family proteinRecName: Full=Endonuclease MutS2; EC=3.1.-.-; chromosome CDS500151 2400 + 0.650417
NA Syncc9605_1668 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1535097 1128 + 0.583333
NA Syncc9605_0001 DNA polymerase III, beta subunitRecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; chromosome CDS231 1158 + 0.596718
NA Syncc9605_1639 recombination protein RecRRecName: Full=Recombination protein RecR; chromosome CDS1508166 660 - 0.627273
NA Syncc9605_1318 single-stranded-DNA-specific exonuclease RecJSubName: Full=Single-stranded-DNA-specific exonuclease RecJ; chromosome CDS1230840 1857 - 0.625202
NA Syncc9605_0394 DNA replication and repair protein RecFRecName: Full=DNA replication and repair protein RecF; chromosome CDS393619 1095 - 0.642009
NA Syncc9605_0936 phage integrase familySubName: Full=Phage integrase family; chromosome CDS900783 507 - 0.510848
NA Syncc9605_2552 DNA ligase, NAD-dependentRecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; chromosome CDS2367605 2043 + 0.666667
NA Syncc9605_0649 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS624174 537 + 0.566108
NA Syncc9605_0563 phage integrase familySubName: Full=Phage integrase family; chromosome CDS545219 576 + 0.574653
NA Syncc9605_1175 DNA primaseRecName: Full=DNA primase; EC=2.7.7.-; chromosome CDS1103219 2049 + 0.624695
NA Syncc9605_0062 DNA-directed DNA polymeraseSubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7; chromosome CDS58482 1845 - 0.667209
NA Syncc9605_0178 ATP-dependent DNA helicase PcrASubName: Full=ATP-dependent DNA helicase PcrA; chromosome CDS183158 2391 + 0.621497
NA Syncc9605_0070 hypothetical proteinSubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS68726 690 - 0.611594
NA Syncc9605_1158 DNA polymerase III, alpha subunitSubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7; chromosome CDS1088792 3519 + 0.590225
NA Syncc9605_2304 ATPaseSubName: Full=ATPase; chromosome CDS2110344 2166 + 0.631579
NA Syncc9605_1653 exodeoxyribonuclease V, gamma subunitSubName: Full=Exodeoxyribonuclease V, gamma subunit; chromosome CDS1523471 3246 - 0.673444
NA Syncc9605_1297 phage SPO1 DNA polymerase-related proteinSubName: Full=Phage SPO1 DNA polymerase-related protein; chromosome CDS1209114 564 + 0.606383
NA Syncc9605_0973 chromosomal replication initiator protein DnaARecName: Full=Chromosomal replication initiator protein DnaA; chromosome CDS927763 1353 + 0.628234
NA Syncc9605_1178 DNA-directed DNA polymeraseSubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7; chromosome CDS1105898 1275 - 0.642353
NA Syncc9605_0687 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS658036 459 - 0.642702
NA Syncc9605_1648 DEAD/DEAH box helicase-likeRecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; chromosome CDS1515608 1824 - 0.622807