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2024-04-29 04:32:41

Gene list

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COG category: Replication, recombination and repair
Organism: Chlorobium chlorochromatii CaD3, CaD3

Number of genes found: 121

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Chlorobium chlorochromatii CaD3, CaD3
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Cag_0548 DNA primasechromosome CDS652586 1983 - 0.486132
NA Cag_0042 hypothetical proteinchromosome CDS47090 1905 - 0.36168
NA Cag_1189 RecR proteinchromosome CDS1583846 615 - 0.486179
NA Cag_0765 transposasechromosome CDS1079123 1236 - 0.402913
NA Cag_0599 hypothetical proteinchromosome CDS702757 834 - 0.314149
NA Cag_1513 DNA repair protein RadCchromosome CDS1987113 669 + 0.433483
NA Cag_1969 Recombination protein O, RecOchromosome CDS2501729 852 - 0.484742
NA Cag_1017 HhH-GPDchromosome CDS1361039 939 + 0.417465
NA Cag_1148 hypothetical proteinchromosome CDS1543585 432 + 0.476852
NA Cag_1301 Excinuclease ABC, A subunitchromosome CDS1766885 2829 + 0.489219
NA Cag_1796 Ankyrinchromosome CDS2316188 3144 + 0.463422
NA Cag_0003 RecF proteinchromosome CDS3251 1095 + 0.386301
NA Cag_0154 Excinuclease ABC, A subunitchromosome CDS171329 2856 - 0.489496
NA Cag_0809 probable transposasechromosome CDS1133897 462 + 0.290043
NA Cag_0626 ATPasechromosome CDS899851 1362 + 0.488253
NA Cag_0029 DNA gyrase, B subunitchromosome CDS31358 1914 - 0.468652
NA Cag_1695 reverse transcriptase family proteinchromosome CDS2200966 1035 + 0.418357
NA Cag_0202 transposasechromosome CDS230436 1236 + 0.402913
NA Cag_1630 hypothetical proteinchromosome CDS2128507 690 + 0.26087
NA Cag_0362 Histone-like DNA-binding proteinchromosome CDS414466 276 + 0.427536
NA Cag_0699 DNA mismatch repair protein MutS-likechromosome CDS970440 2382 + 0.52267
NA Cag_1628 C-5 cytosine-specific DNA methylasechromosome CDS2126357 1080 + 0.322222
NA Cag_0769 Exodeoxyribonuclease V, beta subunitchromosome CDS1083474 3624 + 0.518212
NA Cag_1402 DNA modification methylase-likechromosome CDS1866280 795 - 0.327044
NA Cag_0368 hypothetical proteinchromosome CDS423147 864 - 0.417824
NA Cag_1749 DNA repair protein RecNchromosome CDS2266628 1725 + 0.467246
NA Cag_1529 conserved hypothetical proteinchromosome CDS2007135 579 + 0.373057
NA Cag_0543 conserved hypothetical proteinchromosome CDS646895 2061 + 0.498787
NA Cag_1387 ATP-dependent endonuclease of the OLD family-likechromosome CDS1851699 1653 + 0.315185
NA Cag_0014 Holliday junction resolvase YqgFchromosome CDS16209 423 + 0.491726
NA Cag_0224 DNA polymerase III, delta subunitchromosome CDS253059 1041 + 0.432277
NA Cag_0223 Single-strand binding proteinchromosome CDS252467 519 + 0.435453
NA Cag_0682 transposasechromosome CDS952670 1149 - 0.506527
NA Cag_1214 conserved hypothetical proteinchromosome CDS1613701 285 - 0.442105
NA Cag_1123 conserved hypothetical proteinchromosome CDS1514844 597 + 0.400335
NA Cag_1802 Methylpurine-DNA glycosylase (MPG)chromosome CDS2324131 612 - 0.49183
NA Cag_1608 DnaB helicasechromosome CDS2100167 1536 - 0.475911
NA Cag_0763 Exodeoxyribonuclease V, RecC subunitchromosome CDS1074992 3384 + 0.516253
NA Cag_1296 conserved hypothetical proteinchromosome CDS1759852 954 + 0.432914
NA Cag_1347 TatD-related deoxyribonucleasechromosome CDS1814533 807 + 0.498141
NA Cag_0603 RecJ exonucleasechromosome CDS706047 1707 + 0.491506
NA Cag_0179 DNA polymerase Achromosome CDS200023 2775 - 0.481802
NA Cag_0847 Helicase RecD/TraAchromosome CDS1177760 2217 - 0.498872
NA Cag_1872 exodeoxyribonuclease, small subunitchromosome CDS2379971 249 + 0.437751
NA Cag_0828 Primosomal protein nchromosome CDS1154285 2448 + 0.502451
NA Cag_0911 hypothetical proteinchromosome CDS1243727 1686 + 0.310795
NA Cag_1772 hypothetical proteinchromosome CDS2288369 1722 - 0.311266
NA Cag_0748 transposasechromosome CDS1054528 1236 + 0.410194
NA Cag_1778 DNA polymerase III, delta subunit, putativechromosome CDS2295628 1176 - 0.491497
NA Cag_0328 ATP-dependent DNA helicase RecGchromosome CDS365337 2121 + 0.489863
NA Cag_1438 conserved hypothetical proteinchromosome CDS1905723 555 + 0.468468
NA Cag_0164 Crossover junction endodeoxyribonuclease RuvCchromosome CDS185205 579 - 0.511226
NA Cag_1099 DNA modification methylase-likechromosome CDS1486323 1242 + 0.309984
NA Cag_0876 DNA photolyase, class 2chromosome CDS1208588 1380 + 0.553623
NA Cag_0321 Exonuclease VII, large subunitchromosome CDS356170 1224 - 0.464869
NA Cag_1025 conserved hypothetical proteinchromosome CDS1380089 1518 - 0.322134
NA Cag_1981 transposasechromosome CDS2513293 1236 - 0.402913
NA Cag_0314 Excinuclease ABC, B subunitchromosome CDS349424 2046 + 0.517107
NA Cag_1507 transposasechromosome CDS1976160 1236 + 0.402913
NA Cag_0788 transposasechromosome CDS1106516 1236 - 0.403722
NA Cag_0416 Endonuclease III/Nthchromosome CDS487980 627 - 0.480064
NA Cag_1341 Excinuclease ABC, C subunitchromosome CDS1808936 1890 + 0.454497
NA Cag_1762 site-specific recombinase, phage/XerD familychromosome CDS2278902 1017 + 0.447394
NA Cag_0457 DNA recombination protein, RuvAchromosome CDS535712 615 + 0.474797
NA Cag_1093 putative exonucleasechromosome CDS1478952 1305 - 0.521839
NA Cag_1447 SMF proteinchromosome CDS1914605 1158 + 0.505181
NA Cag_1118 Tyrosine recombinase XerDchromosome CDS1508225 915 - 0.444809
NA Cag_1545 NUDIX/MutT family proteinchromosome CDS2025635 456 - 0.491228
NA Cag_0002 DNA polymerase III, beta chainchromosome CDS2113 1125 + 0.399111
NA Cag_1625 Helix-hairpin-helix DNA-binding, class 1chromosome CDS2124104 519 - 0.458574
NA Cag_0241 RecA DNA recombination proteinchromosome CDS272459 1062 + 0.480226
NA Cag_0332 type II DNA modification methyltransferase M.TdeIIIchromosome CDS370767 1593 + 0.323917
NA Cag_1006 Protein of unknown function DUF83chromosome CDS1345334 648 - 0.458333
NA Cag_1609 hypothetical proteinchromosome CDS2102122 1566 - 0.355683
NA Cag_0095 Single-strand binding proteinchromosome CDS110399 459 + 0.411765
NA Cag_1527 conserved hypothetical proteinchromosome CDS2006216 600 + 0.421667
NA Cag_1966 conserved hypothetical proteinchromosome CDS2496300 696 - 0.425287
NA Cag_1063 transposasechromosome CDS1445420 1236 + 0.402913
NA Cag_1767 Holliday junction DNA helicase RuvBchromosome CDS2284284 1059 + 0.496695
NA Cag_0597 transposasechromosome CDS699769 1236 + 0.402913
NA Cag_1136 conserved hypothetical proteinchromosome CDS1531344 579 - 0.336788
NA Cag_0564 Histone-like DNA-binding proteinchromosome CDS669531 309 + 0.407767
NA Cag_1005 Protein of unknown function DUF48chromosome CDS1344306 1032 - 0.448643
NA Cag_0770 Exodeoxyribonuclease V, alpha subunitchromosome CDS1087346 1740 + 0.531609
NA Cag_0088 DNA gyrase, subunit Achromosome CDS97415 2487 + 0.455167
NA Cag_1580 transposasechromosome CDS2061805 1236 + 0.410194
NA Cag_0145 DNA mismatch repair proteinchromosome CDS162849 1935 + 0.453747
NA Cag_0893 DNA polymerase III, alpha subunitchromosome CDS1224229 3570 + 0.484314
NA Cag_1392 putative type II DNA modification enzyme (methyltransferase)chromosome CDS1855303 1056 + 0.326705
NA Cag_1993 ribonuclease HIIchromosome CDS2530005 621 - 0.479871
NA Cag_1882 Transcription-repair coupling factorchromosome CDS2390726 3300 - 0.470909
NA Cag_0708 transposasechromosome CDS982852 1236 - 0.403722
NA Cag_0890 Methylated-DNA-(protein)-cysteineS-methyltransfe rasechromosome CDS1221177 516 + 0.494186
NA Cag_0848 Histone-like DNA-binding proteinchromosome CDS1179976 309 - 0.404531
NA Cag_1744 ribonuclease Hchromosome CDS2262878 441 + 0.453515
NA Cag_1004 Protein of unknown function DUF196chromosome CDS1343970 291 - 0.388316
NA Cag_0658 transposasechromosome CDS931743 1236 - 0.410194
NA Cag_0832 transposasechromosome CDS1158648 1236 + 0.402913
NA Cag_1041 hypothetical proteinchromosome CDS1409777 291 + 0.439863
NA Cag_0275 NAD-dependent DNA ligasechromosome CDS302186 2004 + 0.513972
NA Cag_0934 ATPasechromosome CDS1269562 1191 - 0.466835
NA Cag_0554 conserved hypothetical proteinchromosome CDS658051 534 - 0.365169
NA Cag_1992 Protein of unknown function UPF0102chromosome CDS2529619 390 - 0.451282
NA Cag_0181 conserved hypothetical proteinchromosome CDS203930 603 - 0.356551
NA Cag_1509 conserved hypothetical proteinchromosome CDS1977873 963 - 0.442368
NA Cag_0086 transposasechromosome CDS95231 1236 + 0.402913
NA Cag_0555 conserved hypothetical proteinchromosome CDS658585 384 - 0.361979
NA Cag_1116 DEAD/DEAH box helicase-likechromosome CDS1505789 1923 + 0.49038
NA Cag_0528 AP endonuclease, family 2chromosome CDS616283 849 - 0.47232
NA Cag_0507 hypothetical proteinchromosome CDS589877 1845 + 0.254201
NA Cag_0001 chromosomal replication initiator protein, DnaAchromosome CDS346 1479 + 0.394861
NA Cag_1317 MutS 1 proteinchromosome CDS1783423 2622 + 0.490084
NA Cag_1918 transposasechromosome CDS2435513 1236 - 0.402913
NA Cag_0075 DNA topoisomerase Ichromosome CDS83182 2397 - 0.479349
NA Cag_1363 serine/threonine protein kinasechromosome CDS1828351 1437 + 0.309673
NA Cag_1007 CRISPR-associated protein TM1801chromosome CDS1346002 843 - 0.398576
NA Cag_2007 DNA-directed DNA polymerase Bchromosome CDS2544884 2367 + 0.421631
NA Cag_1694 HRDCchromosome CDS2200530 462 + 0.409091
NA Cag_1559 transposase for IS1663chromosome CDS2039958 1056 - 0.355114
NA Cag_1415 DNA helicase IIchromosome CDS1884000 2232 - 0.474462
NA Cag_1137 HhH-GPDchromosome CDS1531982 846 - 0.518913