Gene list
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COG category: Replication, recombination and repair
Organism: Salmonella enterica subsp. enterica serovar Typhi Ty2, Ty2
Number of genes found: 198
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| Salmonella enterica subsp. enterica serovar Typhi Ty2, Ty2 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | t3198 | ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; | chromosome | CDS | 3287491 | 1941 | - | 0.573931 |
| NA | t2839 | conserved hypothetical protein | RecName: Full=CRISPR-associated endonuclease Cas1; EC=3.1.-.-; | chromosome | CDS | 2912842 | 918 | - | 0.529412 |
| NA | t3106 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3190731 | 633 | - | 0.530806 |
| NA | t4492 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome | CDS | 4641479 | 447 | - | 0.447427 |
| NA | t2667 | putative DNA-invertase | SubName: Full=Putative DNA-invertase; | chromosome | CDS | 2754056 | 573 | - | 0.509599 |
| NA | t2953 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3043685 | 1464 | - | 0.477459 |
| NA | t1896 | putative bacteriophage protein | SubName: Full=Putative bacteriophage protein; | chromosome | CDS | 1952716 | 261 | - | 0.421456 |
| NA | t4280 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4446878 | 921 | + | 0.438654 |
| NA | t1994 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2051860 | 1659 | - | 0.556962 |
| NA | t4367 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4521199 | 783 | + | 0.586207 |
| NA | t0518 | conserved hypothetical protein | RecName: Full=Uncharacterized Nudix hydrolase YfcD; EC=3.6.-.-; | chromosome | CDS | 590728 | 555 | + | 0.544144 |
| NA | t1346 | DNA-invertase | SubName: Full=DNA-invertase; | chromosome | CDS | 1408218 | 573 | - | 0.450262 |
| NA | t0101 | putative IS element transposase | SubName: Full=Putative IS element transposase; | chromosome | CDS | 115562 | 441 | - | 0.45805 |
| NA | t1926 | putative DNA methylase | SubName: Full=Putative DNA methylase; | chromosome | CDS | 1969578 | 882 | + | 0.530612 |
| NA | t2424 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2497128 | 285 | - | 0.410526 |
| NA | t4355 | putative DNA helicase | SubName: Full=Putative DNA helicase; EC=3.6.1.-; | chromosome | CDS | 4508342 | 1512 | + | 0.508598 |
| NA | t0568 | conserved hypothetical protein | RecName: Full=Nucleoside triphosphatase NudI; EC=3.6.1.-; | chromosome | CDS | 644093 | 426 | - | 0.495305 |
| NA | t1188 | conserved hypothetical protein | RecName: Full=Excinuclease cho; EC=3.1.25.-; AltName: Full=Endonuclease cho; AltName: Full=UvrC homolog protein; | chromosome | CDS | 1256994 | 909 | - | 0.546755 |
| NA | t1986 | probable integrase remnant | SubName: Full=Probable integrase remnant; Flags: Fragment; | chromosome | CDS | 2043456 | 378 | + | 0.460317 |
| NA | t2160 | probable DNA recombinase | SubName: Full=Probable DNA recombinase; | chromosome | CDS | 2223360 | 567 | - | 0.506173 |
| NA | t4518 | integrase | SubName: Full=Integrase; | chromosome | CDS | 4666742 | 1266 | + | 0.496051 |
| NA | t0361 | conserved hypothetical protein | RecName: Full=DnaA regulatory inactivator Hda; | chromosome | CDS | 430548 | 726 | + | 0.53719 |
| NA | t1052 | conserved hypothetical protein | RecName: Full=Uncharacterized Nudix hydrolase NudL; EC=3.6.1.-; | chromosome | CDS | 1136416 | 579 | - | 0.587219 |
| NA | t1685 | putative MutT-family protein | SubName: Full=Putative MutT-family protein; SubName: Full=Putative mutT family protein; | chromosome | CDS | 1748488 | 462 | + | 0.521645 |
| NA | t4520 | protein kinase | SubName: Full=Protein kinase; | chromosome | CDS | 4669143 | 1074 | - | 0.349162 |
| NA | t4357 | probable phage integrase | SubName: Full=Probable phage integrase; | chromosome | CDS | 4511590 | 1014 | + | 0.455621 |
| NA | t1180 | putative MutT-family protein | SubName: Full=Putative MutT-family protein; | chromosome | CDS | 1248331 | 417 | - | 0.570743 |
| NA | t3948 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome | CDS | 4089049 | 372 | + | 0.532258 |
| NA | t0872 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 973891 | 522 | - | 0.425287 |
| NA | t1917 | putative DNA replication protein | SubName: Full=Putative DNA replication protein; | chromosome | CDS | 1963165 | 750 | - | 0.529333 |
| NA | t0102 | putative IS element transposase | SubName: Full=Putative IS element transposase; | chromosome | CDS | 116022 | 1209 | + | 0.489661 |
| NA | t4330 | putative exonuclease | SubName: Full=Putative exonuclease; | chromosome | CDS | 4486672 | 585 | - | 0.439316 |
| NA | t2657 | putative reverse transcriptase | SubName: Full=Putative reverse transcriptase; | chromosome | CDS | 2745590 | 774 | - | 0.404393 |
| NA | t4338 | phage integrase | SubName: Full=Phage integrase; | chromosome | CDS | 4489831 | 1026 | + | 0.495127 |
| NA | t3191 | conserved hypothetical protein | RecName: Full=UPF0213 protein YhbQ; | chromosome | CDS | 3281393 | 318 | + | 0.553459 |
| NA | t1056 | putative ATP-dependent helicase | SubName: Full=Putative ATP-dependent helicase; | chromosome | CDS | 1139104 | 1911 | + | 0.560963 |
| NA | t4227 | DNA helicase | SubName: Full=DNA helicase; | chromosome | CDS | 4395333 | 1365 | + | 0.530403 |
| NA | t4329 | DNA adenine methylase | SubName: Full=DNA adenine methylase; EC=2.1.1.72; | chromosome | CDS | 4485815 | 861 | - | 0.465738 |
| NA | t4519 | protein kinase | SubName: Full=Protein kinase; | chromosome | CDS | 4668070 | 1077 | - | 0.363045 |
| NA | t1384 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1434614 | 1770 | + | 0.585311 |
| NA | t4099 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4237346 | 1125 | + | 0.536 |
| NA | t3009 | conserved hypothetical protein | RecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; | chromosome | CDS | 3099846 | 417 | + | 0.551559 |
| NA | t3400 | probable bacteriophage integrase | SubName: Full=Probable bacteriophage integrase; | chromosome | CDS | 3501128 | 1053 | - | 0.48433 |
| NA | t2647 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2735202 | 1032 | + | 0.44186 |
| NA | t3409 | DNA adenine methylase | SubName: Full=DNA adenine methylase; EC=2.1.1.72; | chromosome | CDS | 3505322 | 858 | + | 0.463869 |
| NA | t4607 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4757469 | 774 | + | 0.591731 |
| NA | t1476 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1525124 | 705 | + | 0.4 |
| NA | t1718 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1785445 | 798 | - | 0.530075 |
| NA | t2913 | conserved hypothetical protein | RecName: Full=RNA pyrophosphohydrolase; EC=3.6.1.-; AltName: Full=(Di)nucleoside polyphosphate hydrolase; | chromosome | CDS | 3004308 | 531 | - | 0.506591 |
| ada | t0599 | ADA regulatory protein | SubName: Full=ADA regulatory protein; | chromosome | CDS | 683567 | 1062 | + | 0.609228 |
| alkA | t0748 | DNA-3-methyladenine glycosidase II | SubName: Full=DNA-3-methyladenine glycosidase II; | chromosome | CDS | 833616 | 870 | + | 0.611494 |
| alkB | t0600 | AlkB protein | SubName: Full=AlkB protein; | chromosome | CDS | 684631 | 651 | + | 0.591398 |
| dam | t4022 | DNA adenine methylase | RecName: Full=DNA adenine methylase; EC=2.1.1.72; AltName: Full=DNA adenine methyltransferase; AltName: Full=Deoxyadenosyl-methyltransferase; AltName: Full=M.StyDam; | chromosome | CDS | 4175716 | 837 | + | 0.492234 |
| dcm | t0886 | DNA-cytosine methyltransferase | RecName: Full=Cytosine-specific methyltransferase; EC=2.1.1.37; | chromosome | CDS | 987120 | 1431 | + | 0.540881 |
| dinP | t2537 | hypothetical protein DinP | RecName: Full=DNA polymerase IV; Short=Pol IV; EC=2.7.7.7; | chromosome | CDS | 2612961 | 1056 | - | 0.514205 |
| dnaA | t3681 | chromosomal replication initiator protein | RecName: Full=Chromosomal replication initiator protein DnaA; | chromosome | CDS | 3790618 | 1401 | + | 0.529622 |
| dnaB | t4152 | replicative DNA helicase | RecName: Full=Replicative DNA helicase; EC=3.6.4.12; | chromosome | CDS | 4296365 | 1416 | + | 0.550141 |
| dnaC | t4586 | probable DNA replication protein | SubName: Full=Probable DNA replication protein; | chromosome | CDS | 4742281 | 738 | - | 0.51084 |
| dnaE | t0232 | DNA polymerase III, alpha chain | SubName: Full=DNA polymerase III, alpha chain; | chromosome | CDS | 266421 | 3483 | + | 0.558714 |
| dnaG | t3130 | DNA primase | RecName: Full=DNA primase; EC=2.7.7.-; | chromosome | CDS | 3217501 | 1746 | + | 0.517182 |
| dnaN | t3682 | DNA polymerase III beta-subunit | RecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; | chromosome | CDS | 3792023 | 1101 | + | 0.563124 |
| dnaQ | t2601 | DNA polymerase III epsilon subunit | RecName: Full=DNA polymerase III subunit epsilon; EC=2.7.7.7; | chromosome | CDS | 2678123 | 732 | - | 0.516393 |
| dnaX | t2376 | DNA polymerase III subunits gamma and tau | SubName: Full=DNA polymerase III subunits gamma and tau; | chromosome | CDS | 2445416 | 1929 | - | 0.589425 |
| endA | t3005 | endonuclease I | SubName: Full=Endonuclease I; | chromosome | CDS | 3096585 | 708 | + | 0.560734 |
| exo | t2880 | 5'-3' exonuclease | RecName: Full=Flap endonuclease Xni; Short=FEN; EC=3.1.-.-; | chromosome | CDS | 2965030 | 816 | + | 0.556373 |
| exoX | t0999 | exodeoxyribonuclease X | SubName: Full=Exodeoxyribonuclease X; EC=3.1.11.-; | chromosome | CDS | 1089074 | 699 | - | 0.519313 |
| fis | t3300 | Fis DNA-binding protein | RecName: Full=DNA-binding protein Fis; | chromosome | CDS | 3395358 | 297 | + | 0.464646 |
| gyrA | t0592 | DNA gyrase subunit A | RecName: Full=DNA gyrase subunit A; EC=5.99.1.3; | chromosome | CDS | 670704 | 2637 | + | 0.555176 |
| gyrB | t3684 | DNA gyrase subunit B | RecName: Full=DNA gyrase subunit B; EC=5.99.1.3; | chromosome | CDS | 3794423 | 2415 | + | 0.556522 |
| helD | t1845 | helicase IV | SubName: Full=Helicase IV; SubName: Full=Helicase IV (75 kD helicase); | chromosome | CDS | 1903289 | 2055 | - | 0.549392 |
| hepA | t0099 | probable ATP-dependent helicase HepA | RecName: Full=RNA polymerase-associated protein RapA; EC=3.6.4.-; AltName: Full=ATP-dependent helicase HepA; | chromosome | CDS | 109791 | 2907 | - | 0.570347 |
| himA | t1220 | integration host factor alpha-subunit | RecName: Full=Integration host factor subunit alpha; Short=IHF-alpha; | chromosome | CDS | 1287512 | 300 | + | 0.483333 |
| himD | t1952 | integration host factor beta-subunit | RecName: Full=Integration host factor subunit beta; Short=IHF-beta; | chromosome | CDS | 2002662 | 285 | - | 0.501754 |
| holA | t2221 | DNA polymerase III, delta subunit | SubName: Full=DNA polymerase III, delta subunit; | chromosome | CDS | 2287802 | 1032 | + | 0.575581 |
| holB | t1719 | DNA polymerase III, delta' subunit | SubName: Full=DNA polymerase III, delta subunit; | chromosome | CDS | 1786253 | 1005 | - | 0.58607 |
| holC | t4511 | DNA polymerase III, chi subunit | SubName: Full=DNA polymerase III, chi subunit; | chromosome | CDS | 4658845 | 483 | - | 0.536232 |
| holD | t4600 | DNA polymerase III, psi subunit | RecName: Full=DNA polymerase III subunit psi; | chromosome | CDS | 4751758 | 438 | + | 0.59589 |
| hrpA | t1544 | ATP-dependent helicase HrpA | SubName: Full=ATP-dependent helicase HrpA; | chromosome | CDS | 1598822 | 3903 | - | 0.536767 |
| hrpB | t0197 | ATP-dependent helicase HrpB | SubName: Full=ATP-dependent helicase HrpB; | chromosome | CDS | 222741 | 2442 | + | 0.595823 |
| hupA | t3461 | histone like DNA-binding protein HU-alpha | RecName: Full=DNA-binding protein HU-alpha; AltName: Full=HU-2; AltName: Full=NS2; | chromosome | CDS | 3551212 | 273 | - | 0.47619 |
| hupB | t2409 | DNA-binding protein HU-beta | RecName: Full=DNA-binding protein HU-beta; AltName: Full=HU-1; AltName: Full=NS1; | chromosome | CDS | 2480576 | 273 | - | 0.494505 |
| int | t1929 | integrase | SubName: Full=Integrase; | chromosome | CDS | 1970990 | 1341 | + | 0.488441 |
| int | t4371 | bacteriophage integrase | SubName: Full=Bacteriophage integrase; | chromosome | CDS | 4524556 | 1260 | - | 0.566667 |
| ligA | t0431 | DNA ligase | RecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; | chromosome | CDS | 503087 | 2016 | + | 0.572421 |
| mfd | t1704 | transcription-repair coupling factor | RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; | chromosome | CDS | 1769354 | 3447 | + | 0.56832 |
| mod | t2507 | Type III restriction-modification system StyLTI enzyme mod | SubName: Full=Type III restriction-modification system StyLTI enzyme mod; EC=2.1.1.72; | chromosome | CDS | 2584244 | 1959 | - | 0.466565 |
| mug | t3132 | G/U mismatch-specific DNA glycosylase | RecName: Full=G/U mismatch-specific DNA glycosylase; EC=3.2.2.28; AltName: Full=Double-strand-specific uracil glycosylase; AltName: Full=Mismatch-specific uracil DNA-glycosylase; Short=MUG; | chromosome | CDS | 3221367 | 507 | - | 0.538462 |
| mutH | t2914 | DNA mismatch repair protein | RecName: Full=DNA mismatch repair protein MutH; AltName: Full=Methyl-directed mismatch repair protein; | chromosome | CDS | 3005521 | 696 | + | 0.579023 |
| mutL | t4410 | DNA mismatch repair protein | RecName: Full=DNA mismatch repair protein MutL; | chromosome | CDS | 4560944 | 1857 | + | 0.58266 |
| mutM | t3792 | formamidopyrimidine-DNA glycosylase | RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase MutM; Short=AP lyase MutM; EC=4.2.99.18; | chromosome | CDS | 3911856 | 810 | + | 0.546914 |
| mutS | t2810 | DNA mismatch repair protein | RecName: Full=DNA mismatch repair protein MutS; | chromosome | CDS | 2886601 | 2568 | + | 0.569704 |
| mutT | t0141 | 7,8-dihydro-8-oxoguanine-triphosphatase | SubName: Full=7,8-dihydro-8-oxoguanine-triphosphatase; | chromosome | CDS | 162959 | 396 | + | 0.520202 |
| mutY | t3023 | A/G-specific adenine glycosylase | SubName: Full=A/G-specific adenine glycosylase; | chromosome | CDS | 3110575 | 1053 | + | 0.548908 |
| nei | t2148 | endonuclease VIII | RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; EC=3.2.2.-; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII; | chromosome | CDS | 2211593 | 792 | - | 0.52399 |
| nfi | t3463 | putative endonuclease | RecName: Full=Endonuclease V; EC=3.1.21.7; AltName: Full=Deoxyinosine 3endonuclease; AltName: Full=Deoxyribonuclease V; Short=DNase V; | chromosome | CDS | 3552303 | 672 | - | 0.58631 |
| nfo | t0652 | endonuclease IV | RecName: Full=Probable endonuclease 4; EC=3.1.21.2; AltName: Full=Endodeoxyribonuclease IV; AltName: Full=Endonuclease IV; | chromosome | CDS | 734840 | 858 | - | 0.537296 |
| nth | t1321 | endonuclease III | RecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; | chromosome | CDS | 1382732 | 636 | - | 0.522013 |
| ntpA | t0977 | DATP pyrophosphohydrolase | SubName: Full=DATP pyrophosphohydrolase; EC=3.6.1.-; | chromosome | CDS | 1066514 | 453 | + | 0.529801 |
| ogt | t1563 | O6-methylguanine-DNA-alkyltransferase | RecName: Full=Methylated-DNA--protein-cysteine methyltransferase; EC=2.1.1.63; AltName: Full=6-O-methylguanine-DNA methyltransferase; Short=MGMT; AltName: Full=O-6-methylguanine-DNA-alkyltransferase; | chromosome | CDS | 1624332 | 516 | + | 0.552326 |
| parC | t3095 | topoisomerase IV subunit A | RecName: Full=DNA topoisomerase 4 subunit A; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit A; | chromosome | CDS | 3179945 | 2259 | - | 0.55954 |
| parE | t3102 | topoisomerase IV subunit B | RecName: Full=DNA topoisomerase 4 subunit B; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit B; | chromosome | CDS | 3186959 | 1893 | - | 0.555732 |
| phrB | t2167 | deoxyribodipyrimidine photolyase | SubName: Full=Deoxyribodipyrimidine photolyase; | chromosome | CDS | 2229355 | 1422 | - | 0.567511 |
| pin | t3437 | DNA-invertase | SubName: Full=DNA-invertase; | chromosome | CDS | 3526780 | 567 | + | 0.513228 |
| polA | t3621 | DNA polymerase I | SubName: Full=DNA polymerase I; | chromosome | CDS | 3722073 | 2787 | - | 0.53929 |
| polB | t0100 | DNA polymerase II | RecName: Full=DNA polymerase; EC=2.7.7.7; | chromosome | CDS | 112871 | 2352 | - | 0.565901 |
| ppdB | t2907 | prepilin peptidase dependent protein B precursor | SubName: Full=Prepilin peptidase dependent protein B; | chromosome | CDS | 2998240 | 564 | - | 0.535461 |
| priA | t3523 | primosomal protein replication factor | SubName: Full=Primosomal protein replication factor; | chromosome | CDS | 3625514 | 2199 | + | 0.593452 |
| priB | t4443 | primosomal replication protein N | RecName: Full=Primosomal replication protein n; | chromosome | CDS | 4589362 | 315 | + | 0.530159 |
| radC | t3789 | putative DNA repair protein | RecName: Full=UPF0758 protein YicR; | chromosome | CDS | 3910451 | 666 | + | 0.527027 |
| rci | t4252 | shufflon-specific DNA recombinase | SubName: Full=Rci; SubName: Full=Shufflon-specific DNA recombinase; | chromosome | CDS | 4419989 | 1152 | + | 0.49566 |
| rdgC | t2472 | recombination associated protein RdgC | RecName: Full=Recombination-associated protein RdgC; | chromosome | CDS | 2545831 | 846 | + | 0.546099 |
| recA | t2730 | recA protein | RecName: Full=Protein RecA; AltName: Full=Recombinase A; | chromosome | CDS | 2813610 | 1062 | - | 0.544256 |
| recB | t2902 | exonuclease V subunit | SubName: Full=Exonuclease V subunit; | chromosome | CDS | 2987540 | 3546 | - | 0.556402 |
| recC | t2904 | exonuclease V subunit | SubName: Full=Exonuclease V subunit; | chromosome | CDS | 2994144 | 3372 | - | 0.537367 |
| recD | t2901 | exonuclease V alpha-subunit | SubName: Full=Exonuclease V alpha-subunit; | chromosome | CDS | 2985708 | 1836 | - | 0.585512 |
| recF | t3683 | recF protein | RecName: Full=DNA replication and repair protein RecF; | chromosome | CDS | 3793321 | 1074 | + | 0.546555 |
| recG | t3774 | ATP-dependent DNA helicase | SubName: Full=ATP-dependent DNA helicase; EC=3.6.1.-; | chromosome | CDS | 3894835 | 2082 | - | 0.582133 |
| recJ | t2960 | single-stranded DNA-specific exonuclease | SubName: Full=Single-stranded DNA-specific exonuclease; | chromosome | CDS | 3049966 | 1734 | - | 0.572664 |
| recN | t2638 | DNA repair protein | RecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; | chromosome | CDS | 2714398 | 1662 | + | 0.54633 |
| recO | t0278 | DNA repair protein RecO | RecName: Full=DNA repair protein RecO; AltName: Full=Recombination protein O; | chromosome | CDS | 316849 | 729 | + | 0.554184 |
| recQ | t3339 | ATP-dependent DNA helicase | SubName: Full=ATP-dependent DNA helicase; EC=3.6.1.-; | chromosome | CDS | 3440746 | 1830 | - | 0.551366 |
| recR | t2374 | recombination protein RecR | RecName: Full=Recombination protein RecR; | chromosome | CDS | 2444436 | 606 | - | 0.613861 |
| relB | t4483 | RelB protein | SubName: Full=RelB protein; | chromosome | CDS | 4630414 | 243 | + | 0.502058 |
| rep | t3384 | ATP-dependent DNA helicase | SubName: Full=ATP-dependent DNA helicase; | chromosome | CDS | 3485500 | 2025 | - | 0.528395 |
| rhlB | t3382 | putative ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; | chromosome | CDS | 3482595 | 1266 | + | 0.546604 |
| rhlE | t2068 | putative ATP-dependent RNA helicase rhlE | RecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; | chromosome | CDS | 2130325 | 1368 | - | 0.584795 |
| rnhA | t2602 | ribonuclease H | RecName: Full=Ribonuclease HI; Short=RNase HI; EC=3.1.26.4; | chromosome | CDS | 2678918 | 468 | + | 0.502137 |
| rnhB | t0231 | ribonuclease HII | RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; | chromosome | CDS | 265801 | 597 | + | 0.561139 |
| rnt | t1302 | ribonuclease T | RecName: Full=Ribonuclease T; EC=3.1.13.-; AltName: Full=Exoribonuclease T; Short=RNase T; | chromosome | CDS | 1366107 | 648 | - | 0.529321 |
| ruvA | t0982 | Holliday junction DNA helicase | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; | chromosome | CDS | 1070157 | 612 | + | 0.553922 |
| ruvB | t0983 | Holliday junction DNA helicase | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; | chromosome | CDS | 1070777 | 1011 | + | 0.569733 |
| ruvC | t0979 | crossover junction endodeoxyribonuclease | RecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; | chromosome | CDS | 1067773 | 522 | + | 0.55364 |
| samB | t4291 | UV protection protein | SubName: Full=UV protection protein; | chromosome | CDS | 4456072 | 1275 | - | 0.50902 |
| sbcB | t0807 | exodeoxyribonuclease I | RecName: Full=Exodeoxyribonuclease I; EC=3.1.11.1; | chromosome | CDS | 901447 | 1431 | - | 0.539483 |
| sbcC | t2469 | exonuclease SbcC | SubName: Full=Exonuclease SbcC; | chromosome | CDS | 2540225 | 3111 | + | 0.585664 |
| sbcD | t2468 | exonuclease SbcD | SubName: Full=Exonuclease SbcD; | chromosome | CDS | 2539026 | 1203 | + | 0.558603 |
| sbmC | t0813 | putative DNA gyrase inhibitory protein | RecName: Full=DNA gyrase inhibitor; | chromosome | CDS | 911282 | 468 | + | 0.508547 |
| seqA | t2178 | seqA protein | RecName: Full=Negative modulator of initiation of replication; | chromosome | CDS | 2245352 | 543 | - | 0.510129 |
| srmB | t0267 | ATP-dependent RNA helicase SrmB | RecName: Full=ATP-dependent RNA helicase SrmB; EC=3.6.4.13; | chromosome | CDS | 305010 | 1335 | - | 0.548315 |
| ssb | t4237 | single strand binding protein | RecName: Full=Single-stranded DNA-binding protein 2; Short=SSB 2; | chromosome | CDS | 4406801 | 537 | + | 0.540037 |
| ssb | t4161 | single-strand DNA-binding protein | RecName: Full=Single-stranded DNA-binding protein 1; Short=SSB 1; | chromosome | CDS | 4306060 | 531 | + | 0.59322 |
| tag | t3877 | 3-methyladenine DNA glycosylase I | SubName: Full=3-methyladenine DNA glycosylase I; SubName: Full=3-methyladenine DNA glycosylase I, constitutive; | chromosome | CDS | 4003989 | 582 | - | 0.517182 |
| tatD | t3321 | putative deoxyribonuclease | RecName: Full=Tat-linked quality control protein TatD; AltName: Full=Deoxyribonuclease TatD; | chromosome | CDS | 3422245 | 783 | - | 0.541507 |
| tnpA | t2995 | transposase for insertion sequence element IS200 | RecName: Full=Transposase for insertion sequence element IS200; | chromosome | CDS | 3085185 | 459 | - | 0.459695 |
| tnpA | t1105 | transposase for insertion sequence element IS200 | RecName: Full=Transposase for insertion sequence element IS200; | chromosome | CDS | 1189317 | 459 | + | 0.459695 |
| tnpA | t0593 | transposase for insertion sequence element IS200 | SubName: Full=Transposase; SubName: Full=Transposase for insertion sequence element IS200; SubName: Full=Transposase for insertion sequence element is200; | chromosome | CDS | 673526 | 459 | + | 0.457516 |
| tnpA | t1587 | transposase for insertion sequence element IS200 | SubName: Full=Transposase; SubName: Full=Transposase for insertion sequence element IS200; SubName: Full=Transposase for insertion sequence element is200; | chromosome | CDS | 1647002 | 459 | + | 0.457516 |
| tnpA | t2986 | transposase for insertion sequence element IS200 | SubName: Full=Transposase for insertion sequence element IS200; | chromosome | CDS | 3077594 | 459 | - | 0.459695 |
| tnpA | t0456 | transposase for insertion sequence element IS200 | RecName: Full=Transposase for insertion sequence element IS200; | chromosome | CDS | 528278 | 459 | + | 0.459695 |
| tnpA | t1154 | transposase for insertion sequence element IS200 | RecName: Full=Transposase for insertion sequence element IS200; | chromosome | CDS | 1220753 | 459 | + | 0.457516 |
| tnpA | t1832 | transposase for insertion sequence element IS200 | SubName: Full=Transposase; SubName: Full=Transposase for insertion sequence element IS200; SubName: Full=Transposase for insertion sequence element is200; | chromosome | CDS | 1895018 | 459 | - | 0.457516 |
| tnpA | t1554 | transposase for insertion sequence element IS200 | RecName: Full=Transposase for insertion sequence element IS200; | chromosome | CDS | 1613303 | 459 | - | 0.459695 |
| tnpA | t2402 | transposase for insertion sequence element IS200 | SubName: Full=Putative IS200 transposase; SubName: Full=Transposase for insertion sequence element IS200; | chromosome | CDS | 2473258 | 459 | - | 0.45098 |
| tnpA | t1197 | transposase for insertion sequence element IS200 | RecName: Full=Transposase for insertion sequence element IS200; | chromosome | CDS | 1265128 | 459 | + | 0.459695 |
| tnpA | t1735 | transposase for insertion sequence element IS200 | RecName: Full=Transposase for insertion sequence element IS200; | chromosome | CDS | 1802131 | 459 | - | 0.459695 |
| tnpA | t0388 | transposase for insertion sequence element IS200 | SubName: Full=Transposase for insertion sequence element IS200; | chromosome | CDS | 464716 | 459 | + | 0.453159 |
| tnpA | t0244 | transposase for insertion sequence element IS200 | SubName: Full=Transposase; SubName: Full=Transposase for insertion sequence element IS200; SubName: Full=Transposase for insertion sequence element is200; | chromosome | CDS | 280079 | 459 | - | 0.457516 |
| tnpA | t3019 | transposase for insertion sequence element is200 | RecName: Full=Transposase for insertion sequence element IS200; | chromosome | CDS | 3108025 | 459 | + | 0.459695 |
| tnpA | t3447 | transposase | SubName: Full=Transposase; | chromosome | CDS | 3536217 | 459 | + | 0.466231 |
| tnpA | t1406 | transposase for insertion sequence element IS200 | SubName: Full=Transposase; SubName: Full=Transposase for insertion sequence element IS200; SubName: Full=Transposase for insertion sequence element is200; | chromosome | CDS | 1450560 | 459 | + | 0.457516 |
| tnpA | t4460 | transposase for insertion sequence element is200 | RecName: Full=Transposase for insertion sequence element IS200; | chromosome | CDS | 4605008 | 459 | - | 0.457516 |
| tnpA | t2909 | transposase for insertion sequence element IS200 | RecName: Full=Transposase for insertion sequence element IS200; | chromosome | CDS | 2999510 | 459 | - | 0.459695 |
| tnpA | t2258 | transposase for insertion sequence element IS200 | RecName: Full=Transposase for insertion sequence element IS200; | chromosome | CDS | 2323397 | 459 | - | 0.459695 |
| tnpA | t1837 | transposase for insertion sequence element IS200 | SubName: Full=Transposase; SubName: Full=Transposase for insertion sequence element IS200; SubName: Full=Transposase for insertion sequence element is200; | chromosome | CDS | 1898230 | 459 | - | 0.457516 |
| tnpA | t2054 | transposase for insertion sequence element is200 | SubName: Full=Transposase; SubName: Full=Transposase for insertion sequence element IS200; SubName: Full=Transposase for insertion sequence element is200; | chromosome | CDS | 2116578 | 459 | - | 0.457516 |
| tnpA | t2920 | transposase for insertion sequence element IS200 | RecName: Full=Transposase for insertion sequence element IS200; | chromosome | CDS | 3012372 | 459 | - | 0.457516 |
| tnpA | t0234 | transposase for insertion sequence element IS200 | SubName: Full=Transposase; SubName: Full=Transposase for insertion sequence element IS200; SubName: Full=Transposase for insertion sequence element is200; | chromosome | CDS | 271067 | 459 | + | 0.455338 |
| tnpA | t1681 | transposase for insertion sequence element IS200 | SubName: Full=Transposase; SubName: Full=Transposase for insertion sequence element IS200; SubName: Full=Transposase for insertion sequence element is200; | chromosome | CDS | 1745409 | 459 | - | 0.457516 |
| tnpA | t2464 | transposase for insertion sequence element IS200 | RecName: Full=Transposase for insertion sequence element IS200; | chromosome | CDS | 2534377 | 459 | - | 0.459695 |
| topA | t1627 | DNA topoisomerase I, omega protein I | RecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; AltName: Full=Omega-protein; AltName: Full=Relaxing enzyme; AltName: Full=Swivelase; AltName: Full=Untwisting enzyme; | chromosome | CDS | 1685267 | 2598 | - | 0.54157 |
| topB | t1177 | DNA topoisomerase III | RecName: Full=DNA topoisomerase 3; EC=5.99.1.2; AltName: Full=DNA topoisomerase III; | chromosome | CDS | 1244535 | 1950 | + | 0.56 |
| topB | t4234 | topoisomerase B | RecName: Full=DNA topoisomerase; EC=5.99.1.2; | chromosome | CDS | 4403378 | 1995 | + | 0.528822 |
| umuC | t0881 | UmuC protein | SubName: Full=UmuC protein; | chromosome | CDS | 981739 | 1269 | + | 0.544523 |
| ung | t0263 | uracil-DNA glycosylase | RecName: Full=Uracil-DNA glycosylase; Short=UDG; EC=3.2.2.27; | chromosome | CDS | 301952 | 690 | - | 0.553623 |
| uvrA | t4160 | excision nuclease subunit A | RecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; | chromosome | CDS | 4302987 | 2826 | - | 0.573248 |
| uvrB | t2089 | excision nuclease ABC subunit B | RecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; | chromosome | CDS | 2150027 | 2022 | - | 0.553907 |
| uvrC | t0930 | excinuclease ABC subunit C | RecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; | chromosome | CDS | 1024005 | 1833 | + | 0.534643 |
| uvrD | t3346 | DNA helicase II | SubName: Full=DNA helicase II; | chromosome | CDS | 3447448 | 2163 | - | 0.577439 |
| vsr | t0887 | patch repair protein | SubName: Full=Patch repair protein; EC=3.1.-.-; | chromosome | CDS | 988531 | 471 | + | 0.56051 |
| wcaH | t0764 | putative O-antigen biosynthesis protein | RecName: Full=GDP-mannose mannosyl hydrolase; Short=GDPMH; EC=3.6.1.-; | chromosome | CDS | 854333 | 480 | + | 0.602083 |
| xerC | t3348 | integrase/recombinase | RecName: Full=Tyrosine recombinase XerC; | chromosome | CDS | 3450462 | 903 | - | 0.566999 |
| xerD | t2962 | site-specific integrase/recombinase | RecName: Full=Tyrosine recombinase XerD; | chromosome | CDS | 3052442 | 897 | - | 0.530658 |
| xseA | t0345 | exodeoxyribonuclease large subunit | RecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit; | chromosome | CDS | 412555 | 1350 | - | 0.582963 |
| xseB | t2439 | exodeoxyribonuclease small subunit | RecName: Full=Exodeoxyribonuclease 7 small subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit; | chromosome | CDS | 2511234 | 243 | + | 0.54321 |
| xthA | t1181 | exodeoxyribonuclease III | RecName: Full=Exodeoxyribonuclease III; Short=EXO III; Short=Exonuclease III; EC=3.1.11.2; AltName: Full=AP endonuclease VI; | chromosome | CDS | 1248820 | 807 | - | 0.521685 |
| yafM | t4614 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4765555 | 486 | + | 0.485597 |
| ybaV | t2407 | putative exported protein | SubName: Full=Putative exported protein; | chromosome | CDS | 2477890 | 375 | - | 0.522667 |
| ybaZ | t2393 | putative methylated-DNA methyltransferase | SubName: Full=Putative methylated-DNA methyltransferase; | chromosome | CDS | 2463894 | 390 | + | 0.558974 |
| ycaJ | t1972 | conserevd hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2027028 | 1344 | - | 0.568452 |
| yejH | t0631 | putative helicase | SubName: Full=Putative helicase; | chromosome | CDS | 712019 | 1761 | - | 0.570131 |
| yffH | t0382 | conserved hypothetical protein | RecName: Full=GDP-mannose pyrophosphatase NudK; EC=3.6.1.-; | chromosome | CDS | 456842 | 576 | + | 0.487847 |
| yhdJ | t3301 | putative adenine-specific DNA-modification methylase | SubName: Full=Putative adenine-specific DNA-modification methylase; | chromosome | CDS | 3395740 | 885 | + | 0.456497 |
| yhhF | t3950 | conserved hypothetical protein | RecName: Full=Ribosomal RNA small subunit methyltransferase D; EC=2.1.1.171; | chromosome | CDS | 4089701 | 597 | - | 0.564489 |
| yibL | t3830 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3953588 | 363 | - | 0.506887 |
| yjaD | t3465 | conserved hypothetical protein | RecName: Full=NADH pyrophosphatase; EC=3.6.1.22; | chromosome | CDS | 3554089 | 774 | - | 0.555556 |
| yraN | t3185 | conserved hypothetical protein | RecName: Full=UPF0102 protein YraN; | chromosome | CDS | 3277989 | 396 | + | 0.558081 |
| yrdD | t4101 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4238942 | 543 | + | 0.528545 |
| yrfE | t4012 | putative NUDIX hydrolase | SubName: Full=Putative NUDIX hydrolase; | chromosome | CDS | 4165345 | 597 | + | 0.522613 |
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