Gene list
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COG category: Replication, recombination and repair
Organism: Synechococcus elongatus PCC 7942, PCC 7942
Number of genes found: 108
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| Synechococcus elongatus PCC 7942, PCC 7942 | ||||||||
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| Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | Synpcc7942_2271 | ADP-ribose pyrophosphatase | chromosome | CDS | 2339045 | 552 | - | 0.525362 |
| NA | Synpcc7942_0447 | endonuclease III | chromosome | CDS | 436851 | 687 | - | 0.573508 |
| NA | Synpcc7942_1263 | N6-adenine-specific DNA methylase-like | chromosome | CDS | 1286711 | 1125 | - | 0.568889 |
| NA | Synpcc7942_2491 | DNA gyrase, B subunit | chromosome | CDS | 2571012 | 1938 | + | 0.545408 |
| NA | Synpcc7942_1886 | single-stranded-DNA-specific exonuclease RecJ | chromosome | CDS | 1957417 | 2055 | + | 0.556204 |
| NA | Synpcc7942_0912 | DNA-directed DNA polymerase | chromosome | CDS | 919325 | 1959 | + | 0.591118 |
| NA | Synpcc7942_1324 | DEAD/DEAH box helicase-like | chromosome | CDS | 1352829 | 2760 | - | 0.570652 |
| NA | Synpcc7942_0869 | conserved hypothetical protein | chromosome | CDS | 871262 | 591 | + | 0.524535 |
| NA | Synpcc7942_2563 | exonuclease SbcC | chromosome | CDS | 2641349 | 3003 | + | 0.602731 |
| NA | Synpcc7942_2607 | exodeoxyribonuclease III exodeoxyribonuclease III (xth) | chromosome | CDS | 2690206 | 798 | - | 0.553885 |
| NA | Synpcc7942_0563 | excinuclease ABC, B subunit | chromosome | CDS | 543654 | 2001 | - | 0.512244 |
| NA | Synpcc7942_2547 | conserved hypothetical protein | chromosome | CDS | 2627005 | 321 | + | 0.554517 |
| NA | Synpcc7942_1790 | DNA adenine methylase | chromosome | CDS | 1861019 | 792 | + | 0.483586 |
| NA | Synpcc7942_0001 | DNA polymerase III, beta subunit | chromosome | CDS | 65 | 1173 | + | 0.570332 |
| NA | Synpcc7942_1945 | excinuclease ABC, C subunit | chromosome | CDS | 2019498 | 1932 | - | 0.539337 |
| NA | Synpcc7942_0079 | conserved hypothetical protein YCF41 | chromosome | CDS | 77138 | 447 | - | 0.577181 |
| NA | Synpcc7942_2298 | Holliday junction DNA helicase RuvA | chromosome | CDS | 2368966 | 624 | + | 0.583333 |
| NA | Synpcc7942_0984 | DNA repair protein RecO | chromosome | CDS | 992870 | 801 | + | 0.599251 |
| NA | Synpcc7942_2009 | conserved hypothetical protein | chromosome | CDS | 2076365 | 2769 | + | 0.581076 |
| NA | Synpcc7942_2247 | DNA mismatch repair protein MutS | chromosome | CDS | 2312310 | 2649 | + | 0.572669 |
| NA | Synpcc7942_2199 | DNA polymerase III, alpha subunit Protein splicing (intein) site | chromosome | CDS | 2277916 | 2613 | - | 0.476464 |
| NA | Synpcc7942_0716 | conserved hypothetical protein | chromosome | CDS | 711446 | 1101 | + | 0.591281 |
| NA | Synpcc7942_2168 | ATP-dependent DNA helicase PcrA | chromosome | CDS | 2248681 | 2385 | + | 0.5174 |
| NA | Synpcc7942_0659 | Rad3-related DNA helicases-like | chromosome | CDS | 653854 | 1422 | - | 0.606892 |
| NA | Synpcc7942_0472 | hypothetical protein | chromosome | CDS | 458795 | 225 | + | 0.533333 |
| NA | Synpcc7942_1369 | recombination protein RecR | chromosome | CDS | 1407202 | 636 | + | 0.566038 |
| NA | Synpcc7942_1323 | formamidopyrimidine-DNA glycosylase | chromosome | CDS | 1351949 | 849 | + | 0.574794 |
| NA | Synpcc7942_1301 | ATP-dependent DNA helicase, RecQ family | chromosome | CDS | 1328678 | 1464 | + | 0.584699 |
| NA | Synpcc7942_0194 | DNA polymerase I | chromosome | CDS | 192655 | 2862 | - | 0.573725 |
| NA | Synpcc7942_1252 | DNA repair protein RAD32-like | chromosome | CDS | 1275556 | 1278 | + | 0.568858 |
| NA | Synpcc7942_0611 | MutS2 family protein | chromosome | CDS | 599815 | 2391 | + | 0.607277 |
| NA | Synpcc7942_0522 | hypothetical protein | chromosome | CDS | 507941 | 372 | + | 0.567204 |
| NA | Synpcc7942_0527 | conserved hypothetical protein | chromosome | CDS | 511398 | 837 | - | 0.507766 |
| NA | Synpcc7942_0570 | Protein splicing (intein) site | chromosome | CDS | 551878 | 1344 | - | 0.584077 |
| NA | Synpcc7942_1227 | DNA repair protein RadC | chromosome | CDS | 1248593 | 735 | - | 0.585034 |
| NA | Synpcc7942_0149 | methylated-DNA--protein-cysteinemethyltransferase | chromosome | CDS | 150187 | 558 | - | 0.544803 |
| NA | Synpcc7942_1518 | ATP-dependent helicase PcrA | chromosome | CDS | 1568627 | 2301 | + | 0.558887 |
| NA | Synpcc7942_1156 | conserved hypothetical protein | chromosome | CDS | 1183497 | 2598 | + | 0.583141 |
| NA | Synpcc7942_1100 | chromosomal replication initiator protein DnaA | chromosome | CDS | 1117103 | 1449 | - | 0.532091 |
| NA | Synpcc7942_1304 | conserved hypothetical protein | chromosome | CDS | 1331160 | 573 | - | 0.511344 |
| NA | Synpcc7942_0780 | serine/threonine protein kinase | chromosome | CDS | 772585 | 1374 | - | 0.558952 |
| NA | Synpcc7942_0277 | DNA ligase, NAD-dependent | chromosome | CDS | 271493 | 2040 | - | 0.588235 |
| NA | Synpcc7942_2484 | conserved hypothetical protein | chromosome | CDS | 2565297 | 693 | - | 0.50505 |
| NA | Synpcc7942_2460 | DNA-cytosine methyltransferase | chromosome | CDS | 2539907 | 1275 | - | 0.441569 |
| NA | Synpcc7942_0254 | DNA gyrase, A subunit | chromosome | CDS | 248859 | 2571 | + | 0.585764 |
| NA | Synpcc7942_1867 | deoxyribodipyrimidine photolyase-like | chromosome | CDS | 1936937 | 882 | + | 0.595238 |
| NA | Synpcc7942_1480 | conserved hypothetical protein | chromosome | CDS | 1531194 | 555 | - | 0.596396 |
| NA | Synpcc7942_2250 | DNA replication and repair protein RecF | chromosome | CDS | 2317075 | 1164 | - | 0.578179 |
| NA | Synpcc7942_1757 | hypothetical protein | chromosome | CDS | 1824648 | 288 | + | 0.527778 |
| NA | Synpcc7942_0759 | hypothetical protein | chromosome | CDS | 752574 | 1380 | + | 0.347101 |
| NA | Synpcc7942_1325 | replicative DNA helicase | chromosome | CDS | 1355787 | 1365 | + | 0.520147 |
| NA | Synpcc7942_1140 | conserved hypothetical protein | chromosome | CDS | 1164350 | 1758 | - | 0.583618 |
| NA | Synpcc7942_1157 | conserved hypothetical protein | chromosome | CDS | 1186081 | 3186 | + | 0.55838 |
| NA | Synpcc7942_1311 | conserved hypothetical protein | chromosome | CDS | 1338222 | 357 | - | 0.543417 |
| NA | Synpcc7942_1842 | Transposase, IS605 OrfB | chromosome | CDS | 1908945 | 1269 | + | 0.539007 |
| NA | Synpcc7942_0348 | recA protein | chromosome | CDS | 340698 | 1071 | - | 0.583567 |
| NA | Synpcc7942_0848 | excinuclease ABC, A subunit | chromosome | CDS | 842336 | 3012 | - | 0.567065 |
| NA | Synpcc7942_2144 | nuclease (SNase-like) | chromosome | CDS | 2228529 | 489 | - | 0.593047 |
| NA | Synpcc7942_0136 | phage integrase | chromosome | CDS | 136706 | 1308 | - | 0.594801 |
| NA | Synpcc7942_0725 | DEAD/DEAH box helicase-like | chromosome | CDS | 718666 | 1410 | + | 0.605674 |
| NA | Synpcc7942_1797 | conserved hypothetical protein | chromosome | CDS | 1866873 | 504 | + | 0.589286 |
| NA | Synpcc7942_0251 | Exonuclease | chromosome | CDS | 247110 | 771 | + | 0.57847 |
| NA | Synpcc7942_2515 | putative DNA helicase | chromosome | CDS | 2594192 | 2268 | - | 0.585097 |
| NA | Synpcc7942_0669 | DNA-3-methyladenine glycosylase | chromosome | CDS | 664540 | 585 | + | 0.596581 |
| NA | pANL28 | pANL28 | pANL | CDS | 20113 | 963 | - | 0.558671 |
| NA | Synpcc7942_1166 | conserved hypothetical protein | chromosome | CDS | 1199437 | 1326 | + | 0.57994 |
| NA | Synpcc7942_1521 | TatD-related deoxyribonuclease | chromosome | CDS | 1572849 | 798 | + | 0.588972 |
| NA | Synpcc7942_0952 | conserved hypothetical protein | chromosome | CDS | 960829 | 792 | - | 0.532828 |
| NA | Synpcc7942_1108 | Histone-like DNA-binding protein | chromosome | CDS | 1125373 | 276 | + | 0.518116 |
| NA | Synpcc7942_1205 | phage_integrase-like | chromosome | CDS | 1233775 | 165 | + | 0.569697 |
| NA | Synpcc7942_1079 | ATP-dependent DNA helicase RecG | chromosome | CDS | 1088698 | 2454 | + | 0.567645 |
| NA | Synpcc7942_2543 | phage SPO1 DNA polymerase-related protein | chromosome | CDS | 2623742 | 708 | - | 0.59887 |
| NA | Synpcc7942_1121 | serine/threonine protein kinase | chromosome | CDS | 1138464 | 2160 | - | 0.592593 |
| NA | Synpcc7942_0727 | conserved hypothetical protein | chromosome | CDS | 720423 | 2544 | + | 0.619104 |
| NA | Synpcc7942_0301 | single-strand binding protein | chromosome | CDS | 299628 | 363 | + | 0.567493 |
| NA | Synpcc7942_2377 | cell division protein FtsQ | chromosome | CDS | 2444319 | 849 | + | 0.595995 |
| NA | Synpcc7942_0835 | Holliday junction DNA helicase RuvB | chromosome | CDS | 829661 | 1128 | + | 0.578014 |
| NA | Synpcc7942_0038 | mutator MutT protein | chromosome | CDS | 36479 | 477 | + | 0.563941 |
| NA | Synpcc7942_2241 | conserved hypothetical protein | chromosome | CDS | 2306546 | 873 | + | 0.601375 |
| NA | Synpcc7942_1294 | serine/threonine protein kinase | chromosome | CDS | 1318734 | 1569 | + | 0.568515 |
| NA | Synpcc7942_1550 | DNA-directed DNA polymerase | chromosome | CDS | 1606746 | 1257 | + | 0.531424 |
| NA | Synpcc7942_1779 | DNA repair protein RecN | chromosome | CDS | 1843941 | 1746 | + | 0.57331 |
| NA | Synpcc7942_0517 | single-stranded-DNA-specific exonuclease RecJ | chromosome | CDS | 502006 | 2328 | - | 0.602663 |
| NA | Synpcc7942_0312 | Protein of unknown function UPF0102 | chromosome | CDS | 311280 | 429 | - | 0.592075 |
| NA | Synpcc7942_0673 | mutator mutT protein A/G-specific adenine glycosylase | chromosome | CDS | 667849 | 1083 | + | 0.5494 |
| NA | Synpcc7942_2398 | Holliday junction resolvase YqgF | chromosome | CDS | 2472467 | 450 | - | 0.597778 |
| NA | Synpcc7942_0703 | DNA processing protein DprA, putative | chromosome | CDS | 694072 | 1209 | + | 0.555831 |
| NA | Synpcc7942_1292 | DNA primase | chromosome | CDS | 1313939 | 2085 | - | 0.573621 |
| NA | Synpcc7942_0651 | primosomal protein N' | chromosome | CDS | 644741 | 2421 | + | 0.589013 |
| NA | Synpcc7942_1780 | DNA mismatch repair protein MutL | chromosome | CDS | 1845760 | 1626 | + | 0.575646 |
| NA | Synpcc7942_0874 | DEAD/DEAH box helicase-like | chromosome | CDS | 874390 | 3060 | - | 0.569281 |
| NA | Synpcc7942_0112 | Deoxyribodipyrimidine photolyase | chromosome | CDS | 111686 | 1455 | + | 0.585567 |
| NA | Synpcc7942_0600 | serine/threonine protein kinase | chromosome | CDS | 588528 | 1533 | - | 0.567515 |
| NA | Synpcc7942_1416 | DNA topoisomerase I | chromosome | CDS | 1468344 | 2652 | + | 0.571267 |
| NA | Synpcc7942_1694 | DNA gyrase/topoisomerase IV, subunit A | chromosome | CDS | 1759930 | 2577 | + | 0.584789 |
| NA | Synpcc7942_0963 | probable methyltransferase | chromosome | CDS | 971259 | 381 | - | 0.603675 |
| NA | Synpcc7942_2248 | Histone-like DNA-binding protein | chromosome | CDS | 2315452 | 276 | - | 0.507246 |
| NA | Synpcc7942_1777 | conserved hypothetical protein | chromosome | CDS | 1841045 | 954 | + | 0.489518 |
| NA | Synpcc7942_0879 | Ribonuclease H | chromosome | CDS | 886245 | 648 | + | 0.587963 |
| NA | Synpcc7942_0094 | DNA polymerase III, delta prime subunit | chromosome | CDS | 91676 | 936 | + | 0.582265 |
| NA | Synpcc7942_1326 | transcription-repair coupling factor | chromosome | CDS | 1357232 | 3462 | + | 0.5855 |
| NA | Synpcc7942_0798 | crossover junction endodeoxyribonuclease RuvC | chromosome | CDS | 792319 | 486 | - | 0.584362 |
| NA | Synpcc7942_2267 | hypothetical protein | chromosome | CDS | 2335846 | 258 | + | 0.573643 |
| NA | Synpcc7942_0405 | DNA polymerase III, delta subunit | chromosome | CDS | 398870 | 999 | + | 0.56957 |
| NA | pANL10 | pANL10 | pANL | CDS | 9463 | 270 | - | 0.555556 |
| NA | Synpcc7942_1111 | serine/threonine protein kinase | chromosome | CDS | 1127864 | 1584 | - | 0.585859 |
| NA | Synpcc7942_2183 | ribonuclease H | chromosome | CDS | 2261556 | 780 | - | 0.575641 |
| NA | Synpcc7942_0368 | exodeoxyribonuclease VII, large subunit | chromosome | CDS | 360711 | 1353 | + | 0.586844 |
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