Gene list
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COG category: Replication, recombination and repair
Organism: Pelodictyon luteolum DSM 273, DSM 273
Number of genes found: 100
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| Pelodictyon luteolum DSM 273, DSM 273 | ||||||||
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| Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | Plut_1322 | DNA-directed DNA polymerase | chromosome | CDS | 1497277 | 1191 | - | 0.576826 |
| NA | Plut_0650 | RNA-directed DNA polymerase | chromosome | CDS | 751910 | 1488 | - | 0.558468 |
| NA | Plut_0462 | RecJ exonuclease | chromosome | CDS | 542864 | 1716 | + | 0.601981 |
| NA | Plut_0598 | DNA repair protein RadC | chromosome | CDS | 698283 | 672 | - | 0.581845 |
| NA | Plut_0971 | HhH-GPD | chromosome | CDS | 1095243 | 858 | + | 0.618881 |
| NA | Plut_1699 | DNA ligase (NAD+) | chromosome | CDS | 1905646 | 2034 | - | 0.627335 |
| NA | Plut_0590 | Tyrosine recombinase XerD | chromosome | CDS | 690247 | 921 | - | 0.609121 |
| NA | Plut_1397 | invertase/recombinase like protein | chromosome | CDS | 1578503 | 531 | - | 0.580038 |
| NA | Plut_0994 | DNA repair exonuclease | chromosome | CDS | 1122180 | 1191 | + | 0.61377 |
| NA | Plut_0002 | RecF protein | chromosome | CDS | 1555 | 1110 | + | 0.512613 |
| NA | Plut_2047 | Holliday junction resolvase YqgF | chromosome | CDS | 2277625 | 426 | + | 0.63615 |
| NA | Plut_0997 | Exodeoxyribonuclease V, beta subunit | chromosome | CDS | 1129313 | 3612 | + | 0.608804 |
| NA | Plut_1913 | DnaB helicase | chromosome | CDS | 2126100 | 1536 | + | 0.584635 |
| NA | Plut_1087 | HhH-GPD | chromosome | CDS | 1235638 | 936 | + | 0.55235 |
| NA | Plut_1462 | Helicase RecD/TraA | chromosome | CDS | 1645129 | 2220 | - | 0.608108 |
| NA | Plut_0998 | Exodeoxyribonuclease V, alpha subunit | chromosome | CDS | 1132921 | 1761 | + | 0.633731 |
| NA | Plut_1758 | DNA recombination protein, RuvA | chromosome | CDS | 1968437 | 603 | - | 0.616915 |
| NA | Plut_1981 | DNA mismatch repair protein | chromosome | CDS | 2205363 | 1881 | - | 0.606592 |
| NA | Plut_1957 | Histone-like DNA-binding protein | chromosome | CDS | 2176195 | 276 | - | 0.554348 |
| NA | Plut_0707 | NUDIX/MutT family protein | chromosome | CDS | 820128 | 405 | + | 0.590123 |
| NA | Plut_1619 | Holliday junction DNA helicase RuvB | chromosome | CDS | 1814224 | 1035 | - | 0.609662 |
| NA | Plut_0528 | Exonuclease | chromosome | CDS | 620342 | 594 | - | 0.555556 |
| NA | Plut_0010 | DNA gyrase, B subunit | chromosome | CDS | 13263 | 1935 | - | 0.55969 |
| NA | Plut_0539 | Excinuclease ABC, A subunit | chromosome | CDS | 630807 | 2871 | + | 0.597353 |
| NA | Plut_1662 | Excinuclease ABC, A subunit | chromosome | CDS | 1864871 | 2877 | + | 0.613486 |
| NA | Plut_0643 | putative transposase | chromosome | CDS | 747678 | 300 | - | 0.506667 |
| NA | Plut_0732 | ATPase | chromosome | CDS | 845042 | 1374 | + | 0.613537 |
| NA | Plut_1191 | conserved hypothetical protein | chromosome | CDS | 1350865 | 537 | - | 0.55121 |
| NA | Plut_0279 | Helix-hairpin-helix DNA-binding, class 1 | chromosome | CDS | 284727 | 513 | - | 0.576998 |
| NA | Plut_1262 | DNA polymerase III, alpha subunit | chromosome | CDS | 1422049 | 3567 | - | 0.593216 |
| NA | Plut_0995 | ATPase involved in DNA repair-like | chromosome | CDS | 1123367 | 2733 | + | 0.613977 |
| NA | Plut_0987 | DEAD/DEAH box helicase-like | chromosome | CDS | 1115046 | 1257 | - | 0.584726 |
| NA | Plut_1199 | conserved hypothetical protein | chromosome | CDS | 1357774 | 834 | - | 0.63789 |
| NA | Plut_0453 | DNA helicase II | chromosome | CDS | 531235 | 2208 | + | 0.595562 |
| NA | Plut_0391 | Excinuclease ABC, B subunit | chromosome | CDS | 464610 | 2088 | + | 0.624042 |
| NA | Plut_0340 | Exonuclease VII, large subunit | chromosome | CDS | 348884 | 1209 | - | 0.617039 |
| NA | Plut_0436 | Transposase-like | chromosome | CDS | 513258 | 1542 | - | 0.550584 |
| NA | Plut_1200 | DNA-directed DNA polymerase | chromosome | CDS | 1358604 | 1299 | - | 0.641263 |
| NA | Plut_1602 | DNA-directed DNA polymerase | chromosome | CDS | 1794564 | 1167 | + | 0.604113 |
| NA | Plut_1589 | DNA primase | chromosome | CDS | 1777743 | 1902 | + | 0.590431 |
| NA | Plut_0817 | hypothetical protein | chromosome | CDS | 937023 | 804 | + | 0.560945 |
| NA | Plut_1645 | DNA polymerase A | chromosome | CDS | 1845351 | 2838 | + | 0.595842 |
| NA | Plut_0001 | DNA-directed DNA polymerase | chromosome | CDS | 284 | 1137 | + | 0.501319 |
| NA | Plut_1301 | Protein of unknown function DUF196 | chromosome | CDS | 1472725 | 291 | + | 0.463918 |
| NA | Plut_0260 | DNA polymerase III, delta subunit | chromosome | CDS | 266359 | 1041 | - | 0.581172 |
| NA | Plut_0485 | Excinuclease ABC, C subunit | chromosome | CDS | 566446 | 1887 | - | 0.584526 |
| NA | Plut_2073 | DNA topoisomerase I | chromosome | CDS | 2304204 | 2409 | + | 0.592777 |
| NA | Plut_1667 | ATP-requiring DNA helicase RecQ | chromosome | CDS | 1870374 | 1848 | - | 0.607684 |
| NA | Plut_0011 | Ribonuclease H | chromosome | CDS | 15317 | 627 | - | 0.61563 |
| NA | Plut_2133 | chromosomal replication initiator protein, DnaA | chromosome | CDS | 2363373 | 1470 | + | 0.496599 |
| NA | Plut_0447 | DNA mismatch repair protein MutS-like | chromosome | CDS | 523612 | 2370 | + | 0.624051 |
| NA | Plut_0630 | Transcription-repair coupling factor | chromosome | CDS | 732901 | 3330 | - | 0.6003 |
| NA | Plut_1607 | ribonuclease H | chromosome | CDS | 1799552 | 462 | + | 0.564935 |
| NA | Plut_0869 | hypothetical protein | chromosome | CDS | 991184 | 837 | - | 0.591398 |
| NA | Plut_1171 | hypothetical protein | chromosome | CDS | 1328738 | 249 | - | 0.477912 |
| NA | Plut_1681 | Endonuclease III/Nth | chromosome | CDS | 1887011 | 639 | + | 0.588419 |
| NA | Plut_0833 | DNA-damage-inducible protein J | chromosome | CDS | 951196 | 264 | - | 0.462121 |
| NA | Plut_0854 | invertase/recombinase like protein | chromosome | CDS | 972563 | 597 | + | 0.552764 |
| NA | Plut_0164 | Exonuclease VII, small subunit | chromosome | CDS | 171696 | 309 | - | 0.540453 |
| NA | Plut_1855 | conserved hypothetical transposase | chromosome | CDS | 2066944 | 984 | - | 0.535569 |
| NA | Plut_1300 | Protein of unknown function DUF48 | chromosome | CDS | 1471690 | 1032 | + | 0.494186 |
| NA | Plut_1837 | conserved hypothetical protein | chromosome | CDS | 2049551 | 339 | + | 0.469027 |
| NA | Plut_1830 | transposase subunit | chromosome | CDS | 2043341 | 1581 | + | 0.55661 |
| NA | Plut_0261 | Single-strand binding protein | chromosome | CDS | 267470 | 492 | - | 0.619919 |
| NA | Plut_1820 | RNA-directed DNA polymerase | chromosome | CDS | 2031253 | 1488 | + | 0.558468 |
| NA | Plut_1624 | site-specific recombinase, phage/XerD family | chromosome | CDS | 1819515 | 1026 | - | 0.545809 |
| NA | Plut_1724 | Histone-like DNA-binding protein | chromosome | CDS | 1932397 | 309 | + | 0.569579 |
| NA | Plut_1642 | Crossover junction endodeoxyribonuclease RuvC | chromosome | CDS | 1843002 | 576 | - | 0.618056 |
| NA | Plut_0822 | DEAD/DEAH box helicase-like | chromosome | CDS | 939792 | 3198 | - | 0.513446 |
| NA | Plut_0948 | Primosomal protein n | chromosome | CDS | 1072352 | 2433 | - | 0.633374 |
| NA | Plut_0107 | hypothetical protein | chromosome | CDS | 123125 | 471 | - | 0.543524 |
| NA | Plut_1010 | DNA polymerase III, epsilon subunit | chromosome | CDS | 1148798 | 711 | + | 0.589311 |
| NA | Plut_1196 | conserved hypothetical protein | chromosome | CDS | 1354358 | 1047 | + | 0.614136 |
| NA | Plut_1299 | Protein of unknown function DUF83 | chromosome | CDS | 1471049 | 645 | + | 0.496124 |
| NA | Plut_1883 | Site-specific recombinase XerD-like | chromosome | CDS | 2092433 | 1950 | + | 0.617949 |
| NA | Plut_0115 | Single-strand binding protein | chromosome | CDS | 129480 | 477 | + | 0.507338 |
| NA | Plut_0996 | Exodeoxyribonuclease V, RecC subunit | chromosome | CDS | 1126089 | 3228 | + | 0.625155 |
| NA | Plut_1298 | CRISPR-associated protein TM1801 | chromosome | CDS | 1470144 | 900 | + | 0.474444 |
| NA | Plut_0275 | RecA DNA recombination protein | chromosome | CDS | 280738 | 1047 | + | 0.597899 |
| NA | Plut_0321 | Methylpurine-DNA glycosylase (MPG) | chromosome | CDS | 332099 | 591 | - | 0.622673 |
| NA | Plut_0005 | DNA-directed DNA polymerase B | chromosome | CDS | 4402 | 2379 | - | 0.498108 |
| NA | Plut_1344 | hypothetical protein | chromosome | CDS | 1518951 | 798 | + | 0.572682 |
| NA | Plut_0113 | AP endonuclease, family 1 | chromosome | CDS | 128038 | 804 | + | 0.55597 |
| NA | Plut_1612 | DNA repair protein RecN | chromosome | CDS | 1803239 | 1722 | + | 0.594657 |
| NA | Plut_2037 | Recombination protein O, RecO | chromosome | CDS | 2267317 | 795 | + | 0.633962 |
| NA | Plut_0587 | DEAD/DEAH box helicase-like | chromosome | CDS | 686304 | 1773 | + | 0.594473 |
| NA | Plut_1259 | hypothetical protein | chromosome | CDS | 1420206 | 462 | + | 0.575758 |
| NA | Plut_1819 | transposase-like | chromosome | CDS | 2030256 | 297 | + | 0.518519 |
| NA | Plut_1912 | Phage SPO1 DNA polymerase-related protein | chromosome | CDS | 2125504 | 600 | + | 0.601667 |
| NA | Plut_0522 | DNA photolyase, class 2 | chromosome | CDS | 614930 | 1488 | - | 0.620296 |
| NA | Plut_1831 | ATPase | chromosome | CDS | 2044940 | 741 | + | 0.557355 |
| NA | Plut_1824 | conserved hypothetical protein | chromosome | CDS | 2036179 | 1884 | - | 0.527601 |
| NA | Plut_0481 | TatD-related deoxyribonuclease | chromosome | CDS | 562756 | 771 | - | 0.622568 |
| NA | Plut_0353 | conserved hypothetical protein | chromosome | CDS | 363615 | 1230 | - | 0.534959 |
| NA | Plut_0350 | ATP-dependent DNA helicase RecG | chromosome | CDS | 358918 | 2112 | + | 0.625947 |
| NA | Plut_0902 | DEAD/DEAH box helicase-like | chromosome | CDS | 1025199 | 3021 | + | 0.57994 |
| NA | Plut_1766 | SMF protein | chromosome | CDS | 1977136 | 861 | + | 0.629501 |
| NA | Plut_0428 | Deoxyribonuclease IV (phage T4-induced) | chromosome | CDS | 504531 | 840 | - | 0.595238 |
| NA | Plut_0098 | DNA gyrase, subunit A | chromosome | CDS | 101707 | 2448 | + | 0.581699 |
| NA | Plut_1284 | RecR protein | chromosome | CDS | 1452520 | 615 | - | 0.61626 |
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