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2024-05-19 00:23:37

Gene list

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COG category: Replication, recombination and repair
Organism: Prochlorococcus marinus str. NATL2A, NATL2A

Number of genes found: 77

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Prochlorococcus marinus str. NATL2A, NATL2A
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PMN2A_0679 conserved hypotheticalSubName: Full=Conserved hypothetical; chromosome CDS625073 1461 - 0.370294
NA PMN2A_0368 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS363959 693 + 0.314574
NA PMN2A_0646 exodeoxyribonuclease VSubName: Full=DNA helicase/exodeoxyribonuclease V, alpha subunit; EC=3.1.11.5; chromosome CDS586035 1722 + 0.33856
NA PMN2A_1651 deoxyribodipyrimidine photolyaseSubName: Full=Deoxyribodipyrimidine photo-lyase type I; EC=4.1.99.3; chromosome CDS1612384 1482 - 0.321862
NA PMN2A_1145 RecF proteinRecName: Full=DNA replication and repair protein RecF; chromosome CDS1080800 1047 - 0.369628
NA PMN2A_1279 NAD-dependent DNA ligaseRecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; chromosome CDS1234752 2073 + 0.312108
NA PMN2A_1135 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1071075 1449 - 0.353347
NA PMN2A_1601 methylpurine-DNA glycosylase (MPG)RecName: Full=Putative 3-methyladenine DNA glycosylase; EC=3.2.2.-; chromosome CDS1565432 570 - 0.373684
NA PMN2A_1068 ribonuclease HRecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; chromosome CDS1009741 588 + 0.367347
NA PMN2A_0369 transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS364715 3504 + 0.326484
NA PMN2A_0357 RecJ exonucleaseSubName: Full=Exonuclease RecJ; EC=3.1.-.-; chromosome CDS352113 1869 + 0.308721
NA PMN2A_0560 endonuclease VIIISubName: Full=DNA-(Apurinic or apyrimidinic site) lyase / endonuclease VIII; EC=3.2.2.-; EC=4.2.99.18; chromosome CDS510596 846 + 0.338061
NA PMN2A_1460 exonuclease VII, large subunitRecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; chromosome CDS1431118 1161 + 0.3118
NA PMN2A_0424 NAD-dependent DNA ligase N-terminusSubName: Full=NAD-dependent DNA ligase N-terminus protein; chromosome CDS408824 687 + 0.28821
NA PMN2A_0328 excinuclease ABC, C subunitRecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; chromosome CDS317460 1923 + 0.309412
NA PMN2A_1324 ATPaseRecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; chromosome CDS1287002 1686 - 0.297153
NA PMN2A_1419 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1389939 390 + 0.335897
NA PMN2A_1835 single-stranded DNA-binding proteinRecName: Full=Single-stranded DNA-binding protein; chromosome CDS1787823 438 - 0.401826
NA PMN2A_1669 superfamily I DNA/RNA helicaseSubName: Full=ATP-dependent DNA helicase, Rep family; chromosome CDS1628808 2418 - 0.365591
NA PMN2A_1768 DNA topoisomerase IRecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; chromosome CDS1725941 2907 + 0.390093
NA PMN2A_0902 cyanobacteria-specific protein containing UvrC-like endonuclease domainSubName: Full=Cyanobacteria-specific protein containing UvrC-like endonuclease domain; chromosome CDS854031 600 + 0.313333
NA PMN2A_1833 conserved hypothetical proteinSubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS1787008 564 - 0.391844
NA PMN2A_0001 bacterial chromosomal replication initiator protein, DnaARecName: Full=Chromosomal replication initiator protein DnaA; chromosome CDS93 1401 + 0.383298
NA PMN2A_0693 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS641909 591 + 0.333333
NA PMN2A_0271 DNA primaseRecName: Full=DNA primase; EC=2.7.7.-; chromosome CDS263649 2028 + 0.352564
NA PMN2A_1332 DNA gyrase/topoisomerase IV, subunit ASubName: Full=DNA topoisomerase IV subunit A; EC=5.99.1.3; chromosome CDS1298550 2484 - 0.299114
NA PMN2A_0467 protein family PM-17SubName: Full=Protein family PM-17; chromosome CDS443876 288 - 0.385417
NA PMN2A_0645 ATP-dependent exoDNAse beta subunitSubName: Full=DNA helicase/exodeoxyribonuclease V, beta subunit; EC=3.1.11.5; chromosome CDS582253 3786 + 0.300317
NA PMN2A_1200 Single-strand binding proteinRecName: Full=Single-stranded DNA-binding protein; chromosome CDS1137896 390 + 0.358974
NA PMN2A_0268 DNA recombination protein, RuvARecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; chromosome CDS261595 675 - 0.284444
NA PMN2A_0059 exonucleaseSubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7; chromosome CDS64478 879 + 0.362912
NA PMN2A_1205 mutator MutTSubName: Full=A/G-specific DNA-adenine glycosylase; EC=3.2.2.-; chromosome CDS1141958 1155 - 0.364502
NA PMN2A_1273 DnaB helicaseSubName: Full=Primary replicative DNA helicase; EC=3.6.1.-; chromosome CDS1229033 1419 + 0.386187
NA PMN2A_1462 conserved hypothetical proteinSubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS1432598 330 - 0.324242
NA PMN2A_0210 endonuclease III/NthRecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; chromosome CDS210963 654 - 0.310398
NA PMN2A_1705 formamidopyrimidine-DNA glycolaseRecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase MutM; Short=AP lyase MutM; EC=4.2.99.18; chromosome CDS1668589 849 - 0.3298
NA PMN2A_0998 helicase, C-terminal:DEAD/DEAH box helicase, N-terminalSubName: Full=Helicase, C-terminal protein:DEAD/DEAH box helicase, N-terminal protein; chromosome CDS937960 2784 - 0.368175
NA PMN2A_0413 putative NAD-dependent DNA ligase (contains BRCT domain type II)SubName: Full=Putative NAD-dependent DNA ligase (Contains BRCT domain type II); chromosome CDS404311 633 - 0.369668
NA PMN2A_1830 Primosomal protein nSubName: Full=Replication restart DNA helicase PriA; chromosome CDS1782752 2244 + 0.369875
NA PMN2A_1441 ATPaseSubName: Full=Recombination protein MgsA; chromosome CDS1414332 2205 + 0.363265
NA PMN2A_1567 possible ribonuclease HIRecName: Full=Ribonuclease H; Short=RNase H; EC=3.1.26.4; chromosome CDS1531032 486 - 0.390947
NA PMN2A_0265 DNA polymerase III, alpha subunitSubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7; chromosome CDS257280 3519 + 0.347542
NA PMN2A_0590 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS532291 282 - 0.41844
NA PMN2A_1733 Recombination protein O, RecORecName: Full=DNA repair protein RecO; AltName: Full=Recombination protein O; chromosome CDS1691835 801 - 0.348315
NA PMN2A_1243 MutS 1 proteinRecName: Full=DNA mismatch repair protein MutS; chromosome CDS1193887 2781 + 0.333333
NA PMN2A_1017 TatD-related deoxyribonucleaseSubName: Full=TatD-related deoxyribonuclease; chromosome CDS962931 792 - 0.382576
NA PMN2A_0199 Holliday junction resolvase YqgFRecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; chromosome CDS200900 435 - 0.347126
NA PMN2A_0274 DNA-directed DNA polymeraseSubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7; chromosome CDS266566 1278 - 0.312989
NA PMN2A_1461 exodeoxyribonuclease VII small subunitSubName: Full=Exodeoxyribonuclease VII small subunit; chromosome CDS1432306 291 + 0.250859
NA PMN2A_0647 helicase, C-terminal:DEAD/DEAH box helicase, N-terminalRecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; chromosome CDS587904 1770 + 0.364407
NA PMN2A_1247 excinuclease ABC, B subunitRecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; chromosome CDS1200224 2037 - 0.350515
NA PMN2A_1585 MutS 2 proteinRecName: Full=Endonuclease MutS2; EC=3.1.-.-; chromosome CDS1548196 2415 + 0.375155
NA PMN2A_0699 crossover junction endodeoxyribonuclease RuvCRecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; chromosome CDS646112 465 + 0.365591
NA PMN2A_0689 DNA gyrase, subunit ARecName: Full=DNA gyrase subunit A; EC=5.99.1.3; chromosome CDS636626 2619 - 0.371516
NA PMN2A_0651 RecR proteinRecName: Full=Recombination protein RecR; chromosome CDS592490 549 + 0.395264
NA PMN2A_1323 excinuclease ABC, A subunitRecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; chromosome CDS1284015 2943 - 0.360177
NA PMN2A_1415 putative RNA methylase family UPF0020SubName: Full=Putative RNA methylase family UPF0020; chromosome CDS1387513 1125 + 0.352
NA PMN2A_1256 ATPaseSubName: Full=DNA polymerase III, tau subunit; EC=2.7.7.7; chromosome CDS1212116 1698 + 0.322144
NA PMN2A_1213 DNA gyrase, B subunitRecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome CDS1148289 1968 - 0.36687
NA PMN2A_1192 Holliday junction DNA helicase RuvBRecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; chromosome CDS1131042 1071 - 0.374416
NA PMN2A_1812 cyanobacteria-specific proteinSubName: Full=Cyanobacteria-specific protein; chromosome CDS1765889 519 + 0.391137
NA PMN2A_0108 phage SPO1 DNA polymerase-related proteinSubName: Full=Phage SPO1 DNA polymerase-related protein; chromosome CDS112825 564 + 0.347518
NA PMN2A_1133 RecA bacterial DNA recombination proteinRecName: Full=Protein RecA; AltName: Full=Recombinase A; chromosome CDS1069645 1134 + 0.404762
NA PMN2A_0519 hypothetical proteinSubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS479543 330 + 0.369697
NA PMN2A_1245 DNA polymerase III, delta subunitSubName: Full=DNA polymerase III, delta subunit; EC=2.7.7.7; chromosome CDS1197394 1029 + 0.322643
NA PMN2A_1275 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1232462 588 + 0.409864
NA PMN2A_0643 possible exodeoxyribonuclease V gamma chainSubName: Full=DNA helicase/exodeoxyribonuclease V, gamma subunit; EC=3.1.11.5; chromosome CDS578294 3294 + 0.328476
NA PMN2A_1817 AP endonuclease, family 1:Exodeoxyribonuclease III xthSubName: Full=Exodeoxyribonuclease III; EC=3.1.11.2; chromosome CDS1769837 828 - 0.342995
NA PMN2A_1840 photosystem II protein Psb27RecName: Full=Photosystem II lipoprotein Psb27; AltName: Full=Photosystem II 11 kDa protein; Flags: Precursor; chromosome CDS1791910 435 - 0.388506
NA PMN2A_1495 DNA polymerase III, delta prime subunitSubName: Full=DNA polymerase III, delta prime subunit; EC=2.7.7.7; chromosome CDS1460891 960 - 0.280208
NA PMN2A_0160 ATP-dependent DNA helicase RecGSubName: Full=ATP-dependent DNA helicase RecG; EC=3.6.1.-; chromosome CDS160505 2541 + 0.359701
NA PMN2A_0748 DNA polymerase ASubName: Full=DNA polymerase A; EC=2.7.7.7; chromosome CDS706505 2961 + 0.34279
NA PMN2A_1328 DNA polymerase III, beta chainRecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; chromosome CDS1292686 1161 + 0.313523
NA PMN2A_0892 histone-like bacterial DNA-binding proteinSubName: Full=Bacterial nucleoid protein Hbs; chromosome CDS843897 276 - 0.452899
NA PMN2A_1856 XisA-like site specific recombinase from phage integrase familySubName: Full=XisA-like site specific recombinase from phage integrase family; chromosome CDS1806562 1161 - 0.344531
NA PMN2A_1652 NUDIX hydrolaseSubName: Full=NUDIX hydrolase; chromosome CDS1613862 561 - 0.374332
NA PMN2A_0728 putative DNA photolyaseSubName: Full=Putative DNA photolyase; chromosome CDS669970 1116 + 0.300179