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2024-05-06 02:50:26

Gene list

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COG category: Replication, recombination and repair
Organism: Ralstonia eutropha JMP134, JMP134

Number of genes found: 190

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Ralstonia eutropha JMP134, JMP134
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Reut_B3895 DNA ligase (ATP)chromosome 2 CDS522871 1656 - 0.682971
NA Reut_A3341 Primosomal protein nchromosome 1 CDS3657094 2286 - 0.672353
NA Reut_A2832 DNA polymerase III, delta subunitchromosome 1 CDS3103910 1059 - 0.677998
NA Reut_B4397 NUDIX hydrolasechromosome 2 CDS1054993 381 + 0.619423
NA Reut_C5991 Transposase, IS204/IS1001/IS1096/IS1165megaplasmid CDS117741 1206 + 0.61194
NA Reut_A0921 Protein kinasechromosome 1 CDS1003315 2058 + 0.663751
NA Reut_C6338 IS66 Orf2 likemegaplasmid CDS514127 354 - 0.615819
NA Reut_A0002 DNA polymerase III, beta chainchromosome 1 CDS2393 1116 + 0.615591
NA Reut_A1123 HhH-GPDchromosome 1 CDS1215358 771 + 0.656291
NA Reut_A0547 SNF2-related:Helicase, C-terminalchromosome 1 CDS592564 2967 + 0.700034
NA Reut_A3242 DNA-3-methyladenine glycosylase Ichromosome 1 CDS3556911 627 + 0.663477
NA Reut_A2455 Protein of unknown function DUF342chromosome 1 CDS2694340 1617 - 0.690167
NA Reut_A0158 Transposase, mutator typechromosome 1 CDS184031 1260 + 0.623016
NA Reut_A2198 conserved hypothetical proteinchromosome 1 CDS2424369 2805 + 0.634581
NA Reut_B4039 Histone-like bacterial DNA-binding proteinchromosome 2 CDS682686 282 + 0.588652
NA Reut_A2953 NUDIX hydrolasechromosome 1 CDS3239097 696 + 0.652299
NA Reut_D6468 Transposase, IS41 CDS24489 789 + 0.618504
NA Reut_A0706 Holliday junction resolvase YqgFchromosome 1 CDS766432 426 + 0.659624
NA Reut_C6164 Phage integrase:Phage integrase, N-terminal SAM-likemegaplasmid CDS311646 1851 - 0.665046
NA Reut_A1342 Helicase c2chromosome 1 CDS1441614 2265 + 0.664459
NA Reut_A1625 Phage integrase:Phage integrase, N-terminal SAM-likechromosome 1 CDS1747615 1236 - 0.690939
NA Reut_A1074 RecJ exonucleasechromosome 1 CDS1164234 1698 - 0.673734
NA Reut_C6072 hypothetical proteinmegaplasmid CDS213741 351 + 0.566952
NA Reut_A0082 Tyrosine recombinase XerCchromosome 1 CDS101670 1020 + 0.681373
NA Reut_C6183 Transposase IS66megaplasmid CDS335887 1599 + 0.609756
NA Reut_A0703 Deoxyribodipyrimidine photolyasechromosome 1 CDS763449 1578 - 0.635615
NA Reut_A0194 AP endonuclease, family 1:Exodeoxyribonuclease III xthchromosome 1 CDS219036 777 - 0.595882
NA Reut_A2534 DNA polymerase III, alpha subunitchromosome 1 CDS2777073 3528 - 0.653628
NA Reut_A0880 Exonuclease VII, small subunitchromosome 1 CDS957690 312 + 0.647436
NA Reut_A2822 NUDIX hydrolasechromosome 1 CDS3093994 501 - 0.660679
NA Reut_A1718 hypothetical proteinchromosome 1 CDS1856453 513 - 0.664717
NA Reut_C6182 IS66 Orf2 likemegaplasmid CDS335529 351 + 0.595442
NA Reut_A0919 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminalchromosome 1 CDS999881 1899 - 0.676672
NA Reut_A1481 hypothetical proteinchromosome 1 CDS1603347 603 - 0.61194
NA Reut_C6412 Transposase, IS4megaplasmid CDS600369 789 + 0.618504
NA Reut_A2769 DNA mismatch repair proteinchromosome 1 CDS3036977 1959 + 0.671261
NA Reut_C5936 Transposase, IS4megaplasmid CDS52031 1446 + 0.5574
NA Reut_B5558 Excinuclease ABC, C subunit, N-terminalchromosome 2 CDS2376138 273 + 0.582418
NA Reut_C6071 Transposase, IS4megaplasmid CDS211928 1446 + 0.556708
NA Reut_A2341 Uracil-DNA glycosylase superfamilychromosome 1 CDS2581608 504 - 0.619048
NA Reut_A2775 conserved hypothetical proteinchromosome 1 CDS3044368 708 + 0.65678
NA Reut_A2114 UvrD/REP helicasechromosome 1 CDS2325382 3594 - 0.677796
NA Reut_A3327 UvrD/REP helicasechromosome 1 CDS3635779 2115 - 0.636407
NA Reut_A0976 NUDIX hydrolasechromosome 1 CDS1064723 615 + 0.626016
NA Reut_A1078 TatD-related deoxyribonucleasechromosome 1 CDS1169159 834 + 0.665468
NA Reut_A2112 AAA ATPase, central regionchromosome 1 CDS2320157 2238 - 0.705541
NA Reut_A2562 conserved hypothetical proteinchromosome 1 CDS2807563 339 - 0.669617
NA Reut_B5594 probable integrase/recombinase proteinchromosome 2 CDS2411195 1026 + 0.690058
NA Reut_C5975 Transposase, IS4megaplasmid CDS102481 1101 + 0.59673
NA Reut_C6339 Transposase IS3/IS911megaplasmid CDS514480 504 - 0.613095
NA Reut_A0003 DNA gyrase, B subunitchromosome 1 CDS3726 2526 + 0.620348
NA Reut_A3392 Histone-like bacterial DNA-binding proteinchromosome 1 CDS3719963 279 + 0.591398
NA Reut_A3410 SMF proteinchromosome 1 CDS3741241 1140 + 0.685088
NA Reut_A1889 conserved hypothetical proteinchromosome 1 CDS2072603 828 + 0.64372
NA Reut_A0568 Transposase, mutator typechromosome 1 CDS614740 1260 - 0.623016
NA Reut_A0527 RecA bacterial DNA recombination proteinchromosome 1 CDS573562 1062 + 0.634652
NA Reut_A3186 ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQchromosome 1 CDS3486352 1848 - 0.661797
NA Reut_B4051 Histone-like bacterial DNA-binding proteinchromosome 2 CDS692016 465 + 0.649462
NA Reut_B4396 Phage SPO1 DNA polymerase-related proteinchromosome 2 CDS1054052 624 - 0.689103
NA Reut_A3310 Recombinasechromosome 1 CDS3619050 1770 + 0.574576
NA Reut_B5314 Methylated-DNA-(protein)-cysteineS-methyltransfe rasechromosome 2 CDS2077591 534 - 0.674157
NA Reut_C6337 Transposase IS66megaplasmid CDS512465 1635 - 0.629358
NA Reut_A2365 Phage integrasechromosome 1 CDS2609137 1215 + 0.651029
NA Reut_A1281 Integration host factor, alpha subunitchromosome 1 CDS1368082 417 + 0.633094
NA Reut_B4443 hypothetical proteinchromosome 2 CDS1105518 219 - 0.570776
NA Reut_A3412 DNA topoisomerase IIIchromosome 1 CDS3743021 2691 + 0.642512
NA Reut_C5937 Transposase IS3/IS911megaplasmid CDS53874 309 + 0.624595
NA Reut_A2883 Putative exonuclease, RdgCchromosome 1 CDS3158734 900 + 0.655556
NA Reut_A2578 DNA gyrase, subunit Achromosome 1 CDS2823178 2652 - 0.613122
NA Reut_B5827 DEAD_2chromosome 2 CDS2655507 2340 - 0.655983
NA Reut_A0577 Tyrosine recombinase XerDchromosome 1 CDS629204 984 - 0.673781
NA Reut_A0596 Exonuclease VII, large subunitchromosome 1 CDS647018 1347 + 0.678545
NA Reut_A2377 hypothetical proteinchromosome 1 CDS2619507 933 - 0.685959
NA Reut_B5480 hypothetical proteinchromosome 2 CDS2276053 858 - 0.638695
NA Reut_A1435 DNA polymerase III delta prime subunitchromosome 1 CDS1550227 1014 + 0.672584
NA Reut_B4584 DNA-directed DNA polymerase Bchromosome 2 CDS1264023 2367 - 0.646388
NA Reut_D6457 Transposase Tn31 CDS12299 3027 + 0.58672
NA Reut_A1360 Transcription-repair coupling factorchromosome 1 CDS1462369 3453 - 0.657689
NA Reut_C5964 Phage integrasemegaplasmid CDS82545 627 - 0.551834
NA Reut_A1111 MutS 1 proteinchromosome 1 CDS1203204 2769 - 0.668111
NA Reut_D6456 phage integrase1 CDS10464 1692 - 0.6513
NA Reut_A1867 Ribonuclease Hchromosome 1 CDS2043300 657 - 0.663622
NA Reut_A2190 DNA polymerase III, epsilon subunit:DNA polymerase 3, epsilon subunitchromosome 1 CDS2417745 723 + 0.636238
NA Reut_A2967 NUDIX hydrolasechromosome 1 CDS3253334 429 - 0.67366
NA Reut_A2384 Endodeoxyribonuclease RusAchromosome 1 CDS2624716 474 + 0.685654
NA Reut_B4913 Resolvase, N-terminalchromosome 2 CDS1638787 594 - 0.646465
NA Reut_A1437 TatD-related deoxyribonucleasechromosome 1 CDS1551781 798 + 0.630326
NA Reut_A2191 Phage integrasechromosome 1 CDS2418833 1257 + 0.614161
NA Reut_A1566 Transposase, IS4chromosome 1 CDS1687022 789 + 0.618504
NA Reut_A2828 Putative RNA methylase:THUMPchromosome 1 CDS3100102 1254 - 0.677831
NA Reut_B5315 Helix-turn-helix, AraC type:HhH-GPD:Ada, metal-binding:AlkA, N-terminalchromosome 2 CDS2078121 1530 - 0.679739
NA Reut_A0638 Transposase, mutator typechromosome 1 CDS684398 1260 - 0.623016
NA Reut_B4922 Phasinchromosome 2 CDS1648631 573 - 0.614311
NA Reut_B5724 hypothetical proteinchromosome 2 CDS2554173 477 - 0.63522
NA Reut_A2212 NUDIX hydrolasechromosome 1 CDS2445156 843 - 0.685646
NA Reut_A2682 DNA polymerase III chi subunit, HolCchromosome 1 CDS2945989 435 - 0.685057
NA Reut_A0782 hypothetical proteinchromosome 1 CDS851971 441 - 0.653061
NA Reut_A0899 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminalchromosome 1 CDS980973 1614 + 0.674721
NA Reut_A0517 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminalchromosome 1 CDS562619 1521 + 0.690993
NA Reut_B4734 Methylated-DNA-(protein)-cysteineS-methyltransfe rasechromosome 2 CDS1433467 723 + 0.695712
NA Reut_A2545 Radical SAMchromosome 1 CDS2788799 1254 - 0.647528
NA Reut_A3394 DNA-directed DNA polymerasechromosome 1 CDS3721531 1095 - 0.66758
NA Reut_A2806 ATP-dependent DNA helicase RecGchromosome 1 CDS3074869 2187 - 0.685414
NA Reut_A0283 UvrD/REP helicasechromosome 1 CDS315429 2178 - 0.67034
NA Reut_A2005 putative primosomal replication protein nchromosome 1 CDS2195174 300 - 0.62
NA Reut_B5079 ATP dependent DNA ligase, C-terminal:ATP dependent DNA ligase, centralchromosome 2 CDS1817933 2706 + 0.678862
NA Reut_A0001 chromosomal replication initiator protein, DnaAchromosome 1 CDS184 1836 + 0.63671
NA Reut_A2250 Recombination protein O, RecOchromosome 1 CDS2482906 876 - 0.688356
NA Reut_A0484 DNA recombination protein, RuvAchromosome 1 CDS527044 582 - 0.659794
NA Reut_A0441 NUDIX hydrolasechromosome 1 CDS485538 492 + 0.646341
NA Reut_B4424 ATP dependent DNA ligase, C-terminal:ATP dependent DNA ligase, centralchromosome 2 CDS1082413 2793 - 0.651629
NA Reut_A0004 RNA-directed DNA polymerasechromosome 1 CDS6870 975 - 0.469744
NA Reut_A0367 Excinuclease ABC, A subunitchromosome 1 CDS396365 2865 - 0.648866
NA Reut_B4524 hypothetical proteinchromosome 2 CDS1196558 1587 - 0.715816
NA Reut_C6415 Transposase, IS204/IS1001/IS1096/IS1165megaplasmid CDS605249 1206 - 0.61194
NA Reut_A0486 Crossover junction endodeoxyribonuclease RuvCchromosome 1 CDS528940 546 - 0.637363
NA Reut_A1297 AP endonuclease, family 1:Exodeoxyribonuclease III xthchromosome 1 CDS1386529 828 - 0.650966
NA Reut_A1034 DNA repair protein RecNchromosome 1 CDS1128148 1731 - 0.691508
NA Reut_A2115 conserved hypothetical proteinchromosome 1 CDS2328972 2874 - 0.691719
NA Reut_A2094 conserved hypothetical proteinchromosome 1 CDS2302145 837 - 0.628435
NA Reut_A3320 hypothetical proteinchromosome 1 CDS3628622 384 + 0.640625
NA Reut_B3621 Transposase IS3/IS911chromosome 2 CDS191438 288 + 0.649306
NA Reut_B3616 DNA polymerase III, epsilon subunitchromosome 2 CDS178243 1593 - 0.64344
NA Reut_A3265 Protein of unknown function UPF0102chromosome 1 CDS3575581 384 - 0.6875
NA Reut_B4522 Uracil-DNA glycosylase superfamilychromosome 2 CDS1192563 594 - 0.683502
NA Reut_A2065 ATP-dependent helicase HrpAchromosome 1 CDS2267224 3972 - 0.661631
NA Reut_A0578 Methylated-DNA-(protein)-cysteineS-methyltransfe rasechromosome 1 CDS630184 579 - 0.625216
NA Reut_B5103 2OG-Fe(II) oxygenasechromosome 2 CDS1845560 672 + 0.68006
NA Reut_D6491 Transposase Tn31 CDS48617 2916 + 0.596708
NA Reut_A3028 Uracil-DNA glycosylasechromosome 1 CDS3329854 768 + 0.690104
NA Reut_D6518 phage DNA methylase1 CDS71769 675 + 0.660741
NA Reut_C6241 Integrase, catalytic regionmegaplasmid CDS406370 1611 + 0.597145
NA Reut_A0732 conserved hypothetical proteinchromosome 1 CDS792367 756 + 0.570106
NA Reut_A3315 Resolvase, N-terminal:Resolvase helix-turn-helix regionchromosome 1 CDS3625222 603 + 0.583748
NA Reut_B4373 conserved hypothetical proteinchromosome 2 CDS1030344 1119 + 0.695264
NA Reut_A0488 Helix-turn-helix, Fis-typechromosome 1 CDS531465 234 - 0.598291
NA Reut_A2536 NUDIX hydrolasechromosome 1 CDS2781635 681 - 0.64464
NA Reut_A2568 Integration host factor, beta subunitchromosome 1 CDS2813250 414 - 0.666667
NA Reut_C6181 conserved hypothetical proteinmegaplasmid CDS335071 459 + 0.59695
NA Reut_C5938 Integrase, catalytic regionmegaplasmid CDS54179 831 + 0.631769
NA Reut_D6523 DNA topoisomerase III1 CDS78546 2064 - 0.671027
NA Reut_A2002 DnaB helicasechromosome 1 CDS2192807 1392 - 0.627874
NA Reut_A2386 conserved hypothetical proteinchromosome 1 CDS2626127 1380 + 0.684058
NA Reut_A0873 DNA polymerase Achromosome 1 CDS947815 2826 + 0.643312
NA Reut_C5906 Excinuclease ABC, A subunitmegaplasmid CDS23835 2694 + 0.648107
NA Reut_C5993 Phage integrasemegaplasmid CDS119556 1029 - 0.630709
NA Reut_A1937 Phage SPO1 DNA polymerase-related proteinchromosome 1 CDS2126240 858 - 0.677156
NA Reut_D6500 Single-strand binding protein1 CDS56994 342 - 0.596491
NA Reut_A0346 Formamidopyrimidine-DNA glycolasechromosome 1 CDS375673 855 + 0.700585
NA Reut_A0369 Single-strand binding proteinchromosome 1 CDS401047 546 + 0.652015
NA Reut_C6378 IS66 Orf2 likemegaplasmid CDS559522 351 + 0.612536
NA Reut_B4482 Uracil-DNA glycosylase superfamilychromosome 2 CDS1151591 594 + 0.641414
NA Reut_A2595 AAA ATPase, central regionchromosome 1 CDS2847001 1341 - 0.665921
NA Reut_A2358 DNA topoisomerase (ATP-hydrolyzing)chromosome 1 CDS2599010 1992 - 0.658635
NA Reut_A0009 conserved hypothetical proteinchromosome 1 CDS13039 330 + 0.654545
NA Reut_C6151 hypothetical proteinmegaplasmid CDS294387 855 - 0.532164
NA Reut_A2475 Protein kinasechromosome 1 CDS2715360 1065 + 0.633803
NA Reut_A1046 Endonuclease III/Nthchromosome 1 CDS1138757 645 - 0.63876
NA Reut_D6519 resolvase1 CDS72445 852 - 0.690141
NA Reut_A2363 hypothetical proteinchromosome 1 CDS2607357 507 - 0.660749
NA Reut_A0348 A/G-specific adenine glycosylase MutYchromosome 1 CDS378816 1182 + 0.698816
NA Reut_C6379 Transposase IS66megaplasmid CDS559904 1596 + 0.616541
NA Reut_A2110 RecR proteinchromosome 1 CDS2319089 615 - 0.669919
NA Reut_A2356 Gram negative topoisomerase IV, subunit Achromosome 1 CDS2595736 2343 - 0.667093
NA Reut_A2732 DNA repair protein RadCchromosome 1 CDS2999137 687 + 0.671034
NA Reut_A1886 NAD-dependent DNA ligasechromosome 1 CDS2065205 2136 - 0.663858
NA Reut_A2200 Transposase, mutator typechromosome 1 CDS2429477 1260 - 0.623016
NA Reut_A0864 UvrD/REP helicasechromosome 1 CDS936381 2361 + 0.654384
NA Reut_C6007 NUDIX hydrolasemegaplasmid CDS131377 498 + 0.604418
NA Reut_D6453 RelB antitoxin1 CDS8415 264 + 0.647727
NA Reut_C6290 Transposase, IS4megaplasmid CDS463068 381 + 0.569554
NA Reut_C6377 Helix-turn-helix, Fis-typemegaplasmid CDS559082 441 + 0.591837
NA Reut_A0887 DNA primasechromosome 1 CDS965208 1815 + 0.651791
NA Reut_A0039 Helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminalchromosome 1 CDS52533 1425 + 0.674386
NA Reut_B5572 hypothetical proteinchromosome 2 CDS2390538 330 - 0.684848
NA Reut_A0440 probable transmembrane proteinchromosome 1 CDS484561 927 + 0.69795
NA Reut_B5582 Exonuclease SbcDchromosome 2 CDS2398546 1146 + 0.677138
NA Reut_A0337 Conserved hypothetical protein 95chromosome 1 CDS367691 645 + 0.685271
NA Reut_A1051 Excinuclease ABC, B subunitchromosome 1 CDS1143965 2088 + 0.633621
NA Reut_A1056 putative site-specific recombinase transmembrane proteinchromosome 1 CDS1147638 2118 + 0.670444
NA Reut_D6455 hypothetical protein1 CDS10009 354 - 0.59887
NA Reut_B4523 DNA polymerase III, alpha subunitchromosome 2 CDS1193226 3336 - 0.671763
NA Reut_A2244 Excinuclease ABC, C subunitchromosome 1 CDS2476430 1992 - 0.662149
NA Reut_B4547 ATP-dependent DNA helicase RecQchromosome 2 CDS1223650 1671 - 0.666068
NA Reut_A3127 Protein of unknown function DUF1568chromosome 1 CDS3437098 786 - 0.655216
NA Reut_A2189 Ribonuclease Hchromosome 1 CDS2417285 438 + 0.639269
NA Reut_A2305 DNA methylase N-4/N-6chromosome 1 CDS2541849 915 - 0.669945
NA Reut_A0483 Holliday junction DNA helicase RuvBchromosome 1 CDS525951 1059 - 0.661945
NA Reut_B4240 Excinuclease ABC, A subunitchromosome 2 CDS889657 5874 - 0.668369
NA Reut_C5992 Histone-like bacterial DNA-binding proteinmegaplasmid CDS118984 609 - 0.610837