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# Xanthomonas campestris pv. vesicatoria, 85-10

>XCV2626 3-methyladenine DNA glycosylase
MPAKPLPRTFYAHDARHVAPQLLNKVLVSADGRRGRITEVEAYCGSDDPA
AHSFRGMTPRTRVMFGAPGHLYVYFIYGMHWAINAVCGGAPGHAVLIRAL
EPLAGIDRMQAARGAAPVTALTTGPGRLAQAFGVTAADNGLDLSTAAARL
WIEDDGVPPPSHPVATPRIGIRKAVDAPWRWVVADSRYVSRPLPRVTGKG
TAPAGD
>XCV1851 ISxcc1 transposase
MRKSKFTDSQIVATLKQVEGGRQVKDVCRELGISDATYYVWKSKYGGMEA
ADVQRLRDLETEHNKLKRMYAELAMENHALKDVIAKKL
>XCVd0114 putative cointegrate resolution protein S
MARYLAAYAGQLALNTLRHRLAALAQWHQAHGFADPTRAPVVRKVLKGIQ
TVHPSQEKRATPLQLTQLGQVVDWLDGAATAAGTRDDAAGRLRHMRDRAF
VLLGFWRGFRGDELVRLQVQDLELVAGEGMTCFLPHSKSDRQHAGTTYKV
PALSRWCPVAATMAWVAAAALHEGPLFRAVNQWGGIAAAPLHPNSLVRLL
RRIFREAGLSSPNDYSGHSLRRGFAGWANANGWDVKALMEYVGWRDVQSA
MRYIDGADPFARQRIEASLPEAPALPRPATT
>XCV3383 ISxac3 transposase
MIERCRDEFPIRLMCRCLKVSASGYYEWSKRPASARQLDNERLVVRMREL
HEDSRGTLGAGRMREDLAEEGETASLNRVARLMAADGLQGWPRRKRRGQR
GSPAVTPPGVVNLLERDFLALEPETKWVTDITEIKTQQGKLYLCIVLDLY
DQRIVGWSMHARQDRQMVIRAVQMAVWQRQGSDKVIVHSDRGSQFRSGDY
QRYLTANGLICSMSAVGHCGDNAACEGFFGLLKRERIYRTSYATLDGARA
DVFDYIERRHNPRMRRRAAKQDQKVAALLQPSVISG
>XCV2484 phage-related integrase
MLTDTKLRNLKPKDKLYKVNDRDGLYVAVTAAGAISFRYNYSIHGRQETI
TFGRYGVGGITLAEARERLGEAKKMVAAGKSPAKEKARDKARVKGAETFG
AWAEKWLRGYQMADSTRDMRRSVYERDLKPKFGNQKLVEITHEDLRALTD
AIVERGAPATAVHVREVVMQVYRWAIERGQKVENPAELVRPTSIAKFEPR
DRALTPDEIGLMYQYMERIGTAPSIRAAAKLLLLTMVRKSELTNATWSEI
NFSDALLTIPKERMKRRNPHLVFLSRQALDIFIALKTFAGGSDYVLPSRY
DSDLPMSSATLNQVLTLTYRLAQKEGKPLAKFGPHDLRRTASTLLHEAGY
NTDWIEKCLAHEQRGVRAVYNKAEYREQRTAMLQDWADMIDEWTLKRSKA
>XCV0620 ISxac2 transposase
MKKSRFTDSQIIAVLKQAQAGAPVPELCREHGISSATFYKWRGKFGGMDV
SMVARMKELEEENRRLKKMYAEAQLSTDLLKEALAKKW
>XCV0356 putative integrase
MTCRMATDSLGIDAGGVIRRLSRRMSYTREAAGAMTRLTPKLLDQVRGRL
RLRHYSLRTEQAYVGWIRRFILANGKRHPGQMGQVEVEAFLTDLATRGQV
SAGTQNQALAALLFLYREVLGVELPWMENLVRAKRPRRIPVVLSAEEVAR
LLTMLEGSCRLMAGLLYGSGMRLLECLRLRIKDVDVVRGEIVVRDGKGGK
DRRVPPPHSLRGELMQQRERALLLHAADLAEGAGRVFLPHALARKYPNAN
VEPGWQYLFLAARRSVDPRSGRVGRHHVSEEVLQRAVQSARRQAGIAKPA
TCHTLRHSFATHLLEAGHDIRTVQELLGHKDVTTKQIYAHVLGRGASAV
>XCV3872 putative membrane protein
MFRTLVHVCVFLVGLLAVCWVGIGYLGSNPLGACVAAVIGACYVAGALEL
YRYRQATATLEAAVDGLATAPSALGAWLQTVHPGLRNAVRLRIKGERVAL
PAPVLTPYLVGLLVLLGMLGTLLGMMATLKGTGFALQSATDLQAIRGSLA
APVEGLAFAFGTSIAGVATSAMLGLLSALCRRERLQVVQRLDLKIAAELH
MHSDAHRRGEAFKLQQQQSALMPALIDQLQTLVHSIQQHSMAAEQRLAAQ
QADFQAKSEAAYARLATAMEHALQAGVAESARAVGAALQPAMEATMASIA
RDTAALQEHVTQAVQQQLDGITHGFQTSASTTAQHWSTALAAQERAQQTH
NAQLQTALEQIAAHSVAVQDSVSSAVQQQLHGVSAAIEQNARTATEHWQV
ALAAQERTQATLAEQLQGTLEQIDQRSVAVQDSVTQAVQQQLSALNDGFA
NSTAASAASWAAVLAEQQRATETHSAQLHATLEQLAQRTSALHDGVQQAV
QQQLDGLSSGFEASTATAAATWTAAVAEQQRANHALTQELQDTLTQFAST
FETRSAALVDAVSQRMQQSSTDAANAWRDALAQQQHASATLSSQHHSALA
AATASFEAHAAALVGTLQQSHTDLQAALEARDTQRLALWSERFGAMSTAL
TAQWEQTGERVARQQQAICDTLASTASELSTQAQAQASATISEVSRLMQI
ASEAPKAAADVVAELRQSLSESMVRDTAMLEERSKLLATLDTLLNAVNHA
STEQREAVDALVTTSADLLQRVGSQLTEQIGSETGKLGAVAAHVSGSAVE
VASLGEAFGMAVQLFSGATSELNERLQHVATALDASLARSDDQLAYYVAQ
AREVVDLSMLSQKQIIEELRQLDRGRGEPGQAETA
>XCV0537 NUDIX hydrolase family protein
MQALPIIGRLAPMSESLFSSSGFAFTHAPLDRGDMLRDDPDALARLWPQG
RVLLIDAKGAALADADGQPLLLDGAELGDGPEAAIFLGLRDAVGWFCVPA
DIVAVQAPQRIDLRQAAADWPAEIATAFAYARAMLHWQSRTRFCGVCGGA
IAFRRAGFIAHCTQCQTEHYPRVDPAIIVAVSDGARLLLGRQASWAPGRY
SVIAGFVEPGESLEQTVAREVFEETRVHVQDCRYLGAQPWPFPGALMLGF
TARAAATEVPQVTGELEDARWVSHAQVSAALAGEGDIGLPPRISIARALI
EHWHRAHG
>XCV1355 ISxcc1 transposase
MRYQRRPDRDDEVIALLSELAERFPERGFGKLFQIIRRRGHVWNHKRVWR
VYCLMKLNQRRRSRRRVPTRHPQPLACGDRPNAGWSIDFMSDALWDGRRF
RTFNVIDDFSREALAIEVDLNLPAARVIRTLERIAAWRGYPNKLRLDNGP
EFVALALSEWAERKGIALDFIEPGRPMQNGFIERFNGSYRRGVLDMHLFR
TLSEVREQTEHWLADYNQQIPHDSLGGLTPAEFRDQHQPQTSSFSWH
>XCV0129 IS1479 transposase
MQLTFGDAEGLGKRKQTRREIFLAEMEQVVPWQQLLGLVAPHYPVSGRPG
RQPYALATMLRIHLLQQWYALSDPAMEEALHEIPTLRRFAQLGGLDNVPD
ETTILNFRRLLETHGLAARMLEAVNAHLARKGQSLRSGTIVDATLIAAPS
STKNADHARDPEMHQTKKGNQWYFGMKAHIGVDEFSGLVHHVHCTAANVA
DVTVTHALLHGKEDSVFGDSGYTGADNREELQTCKAAFFIAARRSVLQAI
GNKRERAREQRWEHFKASVRAKVEHPFRVIKRQFGYTKVRYRGLAKNTAQ
VLTLFALSNLWMKRKQLLPAMGSVRL
>XCV1526 putative TatD related DNase
MQLIDSHCHLDAGEFDHDRAAVIARARAAGVMQQVVPAITAASWPGLRAV
CDQAPGLYPAYGLHPLFLDQHRPEHLELLAEWIERERPCAIGECGLDFFV
DGLDAQAQRAYFDAQLQLAKRFDLPLIVHARRATEEVIARIKAIGGLRGV
VHSFAGSPEQAQQLWKLDFMIGLGGPVTYPRANRLRRLVASMPLQHLLLE
TDAPDQPDAGNRGQRNEPAYLRTVLDCIAQLRGQDPAHIAALTSANARNL
FGLRR
>XCV4234 IS1477 transposase
MKKSRFSTEQIIGFIKQADAGMAVAELCRRHGFSPASFYQWRAKYGGMEA
DEAKRLKELEVQNTRLKKLLAEAHLDIEALKVGFGVKR
>XCV1207 conserved hypothetical protein
MDLFNAPIAPLQVLHDQQGGVRYWPQLLPPALAQGAFDALRDGADWRSQR
REMYERVVDVPRLLASYRLDDAWPAGLPLQRLLDAVQAVLPAPYNAVGLN
LYRDGRDSVAMHHDALHTLVAPHPIALLSLGAPRRMQLRAKDGSTRAVAL
ELAPGSLLAMSHASQHTHAHGIAKTARAVGERISVVFRVRPAQRMAAGQH
GPHWEPVRS
>XCVd0133 putative site-specific DNA-methyltransferase
MADTGAQLDLFQMDHVLQAYEGGSVVDNNELYEHVRAAAGVSQQVMEARQ
PIGASGQHHSVAKRRVRWMQQTARRLGLLERVPERRGAWRLTEEGKRRTG
KAAPGVALLAFSTDLGLAIWGSWESVFPRLDEKIVLCLTSPPYPLRKPRA
YGNPPIHLYVDFIVKALEPIVRNLADGGSIALNLSNDIFEAGLPSRELYL
ERLTLALCDTYRLHKMDTLIWSNPSKPPGPVRWASMTRQQLNVSWEPILW
LTNNPRNCVSDNRRILEPHSDRHQRLMARGGEHREAVNSDGAYRIHQGSY
GRPTDGRIARNVLMHGHRCAEAQACNHFAAEQGLAPHGAPMPLALADKLV
RFLSRPDDLVADPFGGRLTTGKAAEQNGRRWICTELIADHLHSALPRFPQ
AVPGPSF
>XCV2689 ISxac3 transposase
MIERCRDEFPIRLMCRCLKVSASGYYEWSKRPASARQLDNERLVVRMREL
HEDSRGTLGAGRMREDLAEEGETASLNRVARLMAADGLQGWPRRKRRGQR
GSPAVTPPGVVNLLERDFLALEPETKWVTDITEIKTQQGKLYLCIVLDLY
DQRIVGWSMHARQDRQMVIRAVQMAVWQRQGSDEVIVHSDRGSQFRSGDY
QRYLTANGLICSMSAVGHCGDNAACEGFFGLLKRERIYRTSYATLDGARA
DVFDYIERRHNPRMRRRAAKQDQKVAALLQPSVISG
>XCV1894 putative secreted protein
MRRVAVVVTVGVLAACSVQQTPTQAATPAPVACTDPKVEDEWLQHPAGLC
GMPEDVRKLVDDYDTCEHFAGEEPYDADRRHEIEVAVAQFCTPAPARLAT
LMRQYRHDAHVSQWLRQYSKQADLQPAG
>XCV0623 conserved hypothetical protein
MLMDNHVHLLVSADKAGAVFSAMRLSGQLYVQAFNVRHRRSGILWQRRFK
SCLVQTEWYVHTVMRYIELNPVRACMVALPTEYRWSSVHTQLRRAKSQLI
KSHKVYLHLGCDAAERVSVYATGFIRIKPERTSIQFATTSRGSAPWATRA
SRQW
>XCVd0122 putative integrase-like protein
MTRPPAPRPTNEHTKRVRARSPYLVTPQARELQNALQALAAPPEGPLVLA
DIPVVVLGVRFDLSPEQIERATAVLQDLYKHDIKPYADNSRKAIRSDWRH
WVAFCAQGDRVCMPVQLDDLVEFLNSLIAAGYKRATLEHLLFTLKLASRL
WSCTCPTETLQFRWYWQQQCREQLTARNHQAPALNVETVDNIVEAPTRAS
GLAGLLELRDMVYVSMSYDLLGRASEMVRLRWSDVRFDADVDGGATCTIA
RSKTDQQGAGVALYLSPRSAHLLDTWQTQRLLAADYLWPAARLEYLHNPY
VFHRLPRHKLFKPGPTADAKRLRWDAHLNVREADRIIKRAAGDQFSAHSA
RVGAAQDMTRAGMDLPAIMQQGRWNTPTMPARYAENELATRAGKNRQTAL
AKLKNS
>XCV1843 ISxac3 transposase
MSKRRKFTAEFKRGAVEQASQPGVSCAQVARELGIRDTLLTRWKREAQTP
GTAAFGGSGTPRDEELARLKRELARVKKERDFLREAATFFAKGSP
>XCV4427 conserved hypothetical protein
MVGEAFRRQGYSVEQTGLGGADGGIDLILRKDGRRTLVQCKQWKRQQVGV
SVVREMYGLLAHHQAHTVKIACIGTYTKDAERFAEGKPIELIGGEQLLDM
IQAVQQQATAQPTAISARIEPVFGSADSTASANIATPSCPRCGSALVQRR
NRRSGENFLGCSHFPRCRGIS
>XCV0947 NUDIX hydrolase family protein
MNRHDTPPTVVYEGKYQRMVVRGTWEYSERVHAGGLAAIIVAVTPDDAML
FVEQFRVPLQARTIEMPAGLVGDVHADESIELSAIRELEEETGWTAEHAE
VLMIGPTSAGASSEKIAFVRATGLRKVGDGGGDASEDITVHAIPREQVGA
WLVQKMAEGYQMDPKLWAGLYLADHALDGTPRG
>XCV1110 Site-specific DNA-methyltransferase (cytosine-N(4)-specific)
MLLIVNENEPDTSTHTDEPIQEPARGRLVVGDARKVLAGMADKSFQCCIT
SPPYWGLRDYGVDGQIGAEPTLEAYIEDLVALFREVRRTLRDDGTLWLNI
GDGFTSGGRTWRAPDKKNKGRAMEYRAPTPDGLKPKDLIGVPWRLAIALQ
ADGWYLRADIIWQKPNCQPESVKDRPTRSHEYVFLLTKSERYYYNSDAVK
ELTADGKHTKNRRSVWAINTEPYGGNHFAVFPTELVRLCMEAGSKKEEVV
LDPFFGSGTVGQVARDNGRKFVGIELSPDYAELARKRLASKSNSRKLQR
>XCV2295 putative ISxac3 transposase (fragment)
MSKRRKFTAEFKRGAVEQASQPGVSCAQVARELGIRDTLLTRWKREAQTP
GTAAFGGSGTPRDEELARLKRELARVKKERDFLREAATFFAKGSP
>XCV2343 putative transposase
MLNTRVHQSEMSMATDTAPITEHGVATLPEQAWERARRRAEIIGPLAQSE
TVGHEAADAAAQALGLSRRQVYVLIRRARLGSGLVTDLALGQSSGGKGKG
RLPESVERIIRELLQKRFLTKQKRSLAAFHREVVRACKLQKLRVPARNTV
ALRIAGLDPREVTHRREGQDAARDLQGVGGVPPPVSAPLEQVQIDHTVID
LIVVDERDRQPIGRPYLTIAIDVFTRCVLGMVVTLEAPSSVSVGLCLVHV
ACDKRPWLEGLNIEMEWPMSGKPRLLYLDNAAEFKSEALRRGCEQHGIRL
DYRPLGQPHYGGIVERIIGTAMQMIHDELPGTTFSNPDQRGDYDSENKAA
LTLRELERWLTLAVGTYHGSVHNGLLQPPAARWAEAIARTGVPTVITRTT
AFLVDFLPIIRRTLTRTGFVIDHIHYYADALKPWIARRDRLPAFLIRRDP
RDISRIWVLEPEGQHYLEIPYRTLSHPAVTLWEQRQALAKLRQQGREQVD
ESALFRMIGQMREIVSTAQKATRKARRDADRRQHLKATAVLFKTTPPPDA
DMADPQADNQPPAKPFDQIEEW
>XCV2288 single-stranded DNA binding protein
MSTHFWGEGNVGSPPEYREFPNGNDEPRRLLRLNVYFDNPIPRKDGEFED
RGGFWAPVELWHRDAEHWKDLYQKGMRVLVIGRMEREPWTDNEDQPRETW
QINARSVGILPYRIESVALSPKPQEAEPKPQAAQESTPPKDAKRRK
>XCV3395 IS1479 transposase
MQLTFGDAEGLGKRKQTRREIFLAEMEQVVPWQQLLGLVAPHYPVSGRPG
RQPYALATMLRIHLLQQWYALSDPAMEEALHEIPTLRRFAQLGGLDNVPD
ETTILNFRRLLETHGLAARMLEAVNAHLARKGQSLRSGTIVDATLIAAPS
STKNADHARDPEMHQTKKGNQWYFGMKAHIGVDEFSGLVHHVHCTAANVA
DVTVTHALLHGKEDSVFGDSGYTGADNREELQTCKAAFFIAARRSVLQAI
GNKRERAREQRWEHFKASVRAKVEHPFRVIKRQFGYTKVRYRGLAKNTAQ
VLTLFALSNLWMKRKQLLPAMGSVRL
>XCV2867 ISxac3 transposase
MSKRRKFTAEFKRGAVEQASQPGVSCAQVARELGIRDTLLTRWKREAQTP
GTAAFGGSGTPRDEELARLKRELARVKKERDFLREAATFFAKGSP
>XCV2047 NUDIX hydrolase family protein
MSTPEQRWHPDVTVATVVVRDGRFLQVEEAIGGRLLLNQPAGHLEPNESL
LDAAVRETLEETGWDVRLTQFIGTYQWVAPNGQCFLRFAFVADALAHHSE
RSLDTGVVRALWMTPDELRASTERLRSPLVWEVVADYLAGQRYPLSLVRH
VA
>XCV3398 ISxac3 transposase
MIERCRDEFPIRLMCRCLKVSASGYYEWSKRPASARQLDNERLVVRMREL
HEDSRGTLGAGRMREDLAEEGETASLNRVARLMAADGLQGWPRRKRRGQR
GSPAVTPPGVVNLLERDFLALEPETKWVTDITEIKTQQGKLYLCIVLDLY
DQRIVGWSMHARQDRQMVIRAVQMAVWQRQGSDKVIVHSDRGSQFRSGDY
QRYLTANGLICSMSAVGHCGDNAACEGFFGLLKRERIYRTSYATLDGARA
DVFDYIERRHNPRMRRRAAKQDQKVAALLQPSVISG
>XCV0569 putative extracellular ribonuclease
MRLPSRFVSLRCTLPLACAFALGATSANAAVFINELHYDDVGASGDSGEG
VEVVATAGESLSGYRIYLYNGNSPSAAVVYANTAVPAGTVVSCGSQVRMA
TVSYASNGVQNGPNDGVALVDPNGQLVQFLSYEGAITGSGGPAAGVTSQN
LPVSESNSTAVGSSLQLTGTGSSAANFSWAGSAAQTFGACNRGQTFTGSD
GGGSTGAPTISSTTPTQGATGFPAAGDLAVGFSEAVTLGSGAFALSCASS
GNVALTYPTSGTRFTLSTNTALVGGERCTLAITASAIRDASGLSPAANQS
IAFTVATASGGGTGYYARVNTASASQLRCSLHATIKGHTVYPYSGSGTST
WTILEMADEDPNNSGRILDAYRNRSYAKVSDRAGTGSGLTYNREHTWPNS
LGFGSATGDRGLPYAPYTDTHMLYLTDTSFNADRGNKPYATCTSSCGERV
TEVNDGSGGGSGRYPGNSNWVRTPDGNSGTFEVWGRRKGDMARAVMYMAI
RYEGGLDAATGQSEPDLELTDDRSKIVQTAASPAYMGLLSTLLAWHQADP
PDDAERARNEVIFSFQGNRNPFVDHPEWATASLFNSAKPASCQLAN
>XCV1301 IS1477 transposase
MKKSRFSTEQIIGFIKQADAGMAVAELCRRHGFSPASFYQWRAKYGGMEA
DEAKRLKELEVQNTRLKKLLAEAHLDIEALKVGFGVKR
>XCV1697 phage-related integrase
MRIPHHLTRSPTGHWAFRQRVPVDLQCVLDQKVIKRTLHTSELASARLRA
LLLAAGYAQAFDVLRDRRVDKLDKKDMEALVERLGHGASLRELTLHRTQA
PDGTISERWQIDNDEDLRLFRKSQTWANAAEVAAIGALDPGHTVQPKASL
PQVAEVIVLSKAREAWLATIKSRTLPKTYTIKMAAVDSLVAFLGAKTKLH
TITRPDLARWYQHMREKGASTPTLTNKQSYVGGKGSFFDWAIASGYYPKG
DNPASGHVSYSVREKRARRKLGFKAYDREQIKTIFSPINFERLSANARWA
ALIGLYTGARASEVGQLLVADVFKEGKIPCIRISDEGEHQKVKTEVSLRT
VPLHPDLLALGFMEWVDTCKAAGHKRLFPQARADAKNGAGNWITKAFSRH
LAEIGKEWPKAKRGFHSLRKSVIQELQGAGCPSELRGVHPRFHGHLQEGR
SRP
>XCV3411 ISxac2 transposase
MKKSRFTDSQIIAVLKQAQAGAPVPELCREHGISSATFYKWRGKFGGMDV
SMVARMKELEEENRRLKKMYAEAQLSTDLLKEALAKKW
>XCVd0103 Site-specific recombinase
MVLIGYARVSTAEQDTALQTDALRKAGCARVFEDTASGAKADRPGLADAL
AYLRAGDVLAVWRLDRLGRSMQHLIETIAALEARGVGFRSLTESIDTTTP
GGRLIFHVFGALGQFERDLIRERTKAGLTAAAARGRKGGRKPVVTADKLQ
RAREHIANGLNAREAATRLKVSKTALYAALQSTSAADS
>XCV0228 ISxac2 transposase
MVRPSQRREMAQSAVTSGRTNIRHACQTFAVSQTCFRYQAKASEQNARIA
DWLIRLTTAHRDWGFGLCYLYLRNVKGFGWNHKRIYRIYRELELNLRIKP
KKRLVRERPQPLAVPETINQVWSMDFMQDQLADGRSFRLFNVLDDFNREG
LGIEVDLSLPSARVIRSLEQIIEWRGKPAVIRCDNGPEYISGALLSWAQR
HGIRVEHIQPGKPQQNAYVERYNRTIRYAWLAQTLFDTIDQVQDKATRWL
WTYNHERPNMALGGITPAMKLAMAA
>XCV3919 IS1478 transposase
MRTRRPAAEQLPADELFRSRLENQIDLRHPLVQLIHRLPWSALEQALSPR
LPATPGTGGRPALPVRLIAGLLYLKHAYGLSDEAVCERWLENPYWQFFTG
EY
>XCVd0022 IS1404 transposase
MPAAWLQRSLVLPVAQQVRWDERARCQAAQGPGVRERAAEEVAGRAVVRE
RPDQGCTAKKVVSAPARRTLVREWIGRGASERRALAVIGMSASALRYCPR
EDRNGELRERICALAHRHRRYGVGMIYLKLRQEGRIVNYKRVERLYREQQ
LQVRRRKRKKVPIGERQPLLRPSQANQVWSMDFVFDRTAEGRVIKCLVIV
DDATHEAVAIEVERAISGHGVTRVLDRLAHSRGLPKVIRTDNGKEFCGKA
MVAWAHARNVQLRLIQPGKPNQNAYVESFNGRLRDECLNEHWFPTLLHAR
TEIERWRREYNEDRPKKAIGGMTPAAYAQHLANTDIINPGL
>XCV2712 putative transposase (fragment)
MFLVEMDRLVPCKNLLALIEPHYPRSGQPGDNHISWRQCCAFTVLQQWYA
SNDPSTEEALYDAVSVRCSVEIVGWMRCRPRRRFSTFATC
>XCV1840 IS1477 transposase
MLEHTPLSERRACRLAGLSRDAFRHAPVPTPATQALSARLVELAQTHRRF
GYRRLHDLLRPEFPSVNHKKIYRLYEEAELKVRKRRKAKRPVGERQKLLA
SSMPNDTWSMDFVFDALANARRIKCLTVVDDFTRESVDIAVDHGISGAYV
VRLLDQAACFRGYPRAVRTDNGPEFTSRAFIAWTQQHGIEHILIEPGAPT
QNAYIESFNGKFRDECLNEHWFTSLAQARDVIADWRRHYNQIRPHSSCGR
IPPAQFAANYRTQQANNAVPFNPGLYQ
>XCVb0012 putative ISxac3 transposase (fragment)
MSKRRKFTAEFKRGAVEQASQPGVSCAQVARELGIRDTLLTRWKREAQTP
GTAAFGGSGTPRDEELARLKRELARVKKERDFLREAATFFAKGSP
>XCV1536 putative photolyase
MVIHRPASRHRCARWLMLRSLTVCCRARMSYAIVWFRRDLRLEDNPALRA
ALDAGHHPIPLYIDAPHEEGEWTPGAASRTWRHRSLAALDGALRALGSGL
VIRSGDSAQVLDEVIAQTGAVAVYWNRKYEPATQPRDAQIKRDLRERGIE
VQSCNAALLFEPWQLSTQQGGPYKVFTPFWRNALTQLQLPAAMDAPRRLP
PLPASLKTDALDTLQLVPGLQWDQGFWEHWQPGEAGAHEMLEIFIDGALS
GYRENRDRPDRVGTSQLSPHLHFGEIAPWRIASTLEAHRTARNGAEIDGY
IRQLGWRDFAYHLLHHFPDTTNQNLNPRFAGFDWATVDPVALQAWQRGRT
GIPIVDAGMRQLWHTGWMHNRVRMIVASFLCKHLRIHWIEGARWFWDTLV
DADLANNTLGWQWVAGTGADAAPYFRVFNPVTQAEKFDPHATYITRWVPE
LGKLAVKERFAPWLHPLALARFAPEYPRNPIIGLAEGRDAALAAYAKSRA
>XCV3906 ImpB/MucB/SamB family protein (C-terminal fragment)
MYSIDESFLDLAGIRDRRQLSVDLSERVHQWTGIPNCIGIAPTKTLAKLA
NRVAKDAARKLGSYPAGLAGVCDLAALSGSELDAVLRATSRRDRLRGRHP
RQRCRGSVDQVTADRARRGDSEG
>XCV1968 IS1477 transposase
MKKSRFSTEQIIGFIKQADAGMAVAELCRRHGFSPASFYQWRAKYGGMEA
DEAKRLKELEVQNTRLKKLLAEAHLDIEALKVGFGVKR
>XCV2902 putative 6-O-methylguanine-DNA methyltransferase
MPTSRHPTPRGTASPPARAGSKSASLSGEQARLRILQAIGAIPVGEVAGY
GEVARRAGLPGRARLVARVLSGNDDPQLPWHRVLRSDGRIALPEGSAGYR
EQCQRLRDEGVQVERGRVRRASAAQRLDAAVWGPS
>XCV0705 ISxac3 transposase
MIERCRDEFPIRLMCRCLKVSASGYYEWSKRPASARQLDNERLVVRMREL
HEDSRGTLGAGRMREDLAEEGETASLNRVARLMAADGLQGWPRRKRRGQR
GSPAVTPPGVVNLLERDFLALEPETKWVTDITEIKTQQGKLYLCIVLDLY
DQRIVGWSMHARQDRQMVIRAVQMAVWQRQGSDEVIVHSDRGSQFRSGDY
QRYLTANGLICSMSAVGHCGDNAACEGFFGLLKRERIYRTSYATLDGARA
DVFDYIERRHNPRMRRRAAKQDQKVAALLQPSVISG
>XCV2264 hypothetical protein
MSLDLESTAAQATPVQSELLDAESSPLTLSLQDFVGEFGDELLDSLNRAN
PPVYTGQPQTRRQLIVASLKRKLFEAQAEVVHAAAELLIDRGERAAIVNG
EMGCGKTTVGIATAAVLNAEGYRRTLVLSPPHLVYKWRREIQETVAGAKV
WVLNGPDTLVKLIKLREQLGVQPTGQEFFVLGRVRMRMGFHWRPVFTRRR
TRHGDVAACPDCGHIITDLDGEPVNPIELDAEEYRRKCSHCAGFTPVFTD
TYKKADQGHEECSCQSAGSSLPSSSVARLSRPASPASAVPRWPGSWGFAT
PC
>XCV1302 hypothetical protein
MSSEQELPALLTSLQNTLKLQSALMAKFEQREVRMQASFDQRMQALQGEV
AQVHRRVDGIVGGASSQIAKEAKDAVAPVAAQYDRDVSATSAQLQKANKT
VWMWFAAAGAILLLVLLVGWTVLGYYRRELAAVKDELGRYENAIPVLQAY
YASDAAICGGRVCVNVDPNGQRAGDKRQYRQAKPRSQK
>XCV1841 IS1477 transposase
MKKSRFSTEQIIGFIKQADAGMAVAELCRRHGFSPASFYQWRAKYGGMEA
DEAKRLKELEVQNTRLKKLLAEAHLDIEALKVGFGVKR
>XCV0054 conserved hypothetical protein
MNVSADRLRLLRRQAGQADVPAPAKADDGDGDALHDAPAVDAQAADAAPV
DEAAQPASGVHTQGTTPAPGHAPGVSAERLRLLRRQVGGLTPAARKDDAI
MPTRAQRAAVSGAALPTAGLPLRENAAARHGAVAARPNEARDASTRTRRA
LQAPMPAPPAREASVFAWVEHDVRHKPALPSNVDVDAIIAVEADSARPWP
TARSTATTSPASMSPPPPVQRRTDIAGLRKMIGLRERAVSAHAPIRAPST
DRSLPGNEIAPGLHLIQAFLPQAIPTEALSLAFAKRDDAVDPMDLLFFDT
ETTGLAGGTGTRAFMIGVADWVVDAVQGNGLRVRQLMMSTMAAESAMLDL
FRTWLTPRTVLSSYNGRCYDAPLLKTRYRLARRGDPISALDHVDLLFPTR
RRYRGTWENCKLSTIERQLLRVVREDDLPGSEAPAAWLSYLRGGSARNLR
RVAEHNHQDVVTLSLLMQRLVAVDAQERNALTLARTP
>XCV0621 ISxac2 transposase
MVRPSQRREMAQSAVTSGRTNIRHACQTFAVSETCFRYQAKASEENARIA
DWLVRLTTAHRDWGFGLCYLYLRNVKGFGWNHKRIYRIYRELELNLRIKP
KKRLVRERPEPLAVPEAINQVWSMDFMHDQLADGRSFRLFNVLDDFNREG
LGIEVDLSLPSARVIRSLEQIIEWRGKPAVIRCDNGPEYISGALLSWAQR
HGIRVEHIQPGKPQQNAYVERYNRTIRYAWLARTLFDTIDQVQDKATRWL
WTYNHERPNMALGGITPAMKLAMAA
>XCV2757 putative excinuclease subunit (fragment)
MARSERVRRGLGAVEYAYPEHLRSTLETLPTTAGVYLFHGQDSELPLYIG
KSVNLRVRVMDHFRTPREASLLRQTRRISVFEMAGDLGAQLLESQLIKSM
RPLV
>XCV2217 phage-related integrase
MPLTDTAIRKTKPGAVPLKLRDGGGLYLLMRPDGARWWRWDYRRPVTGKR
NTLSLGTYPDTGLADAREKRDAARKLLAAGVDPGEQRKQAKQERAALVDA
AGETFEVVAREWMARQTVARVTAEKNRWLLETFLFPEIGSRPIGEITPRE
LLDALRKIEATGKLETAARAKIKAGQVFRYAMLEGKAEIDPTASLRGALK
AAKARHHAAVTEPAKIGQLLRAIEGFSGQPVTHAALKLAPLVFVRPGELR
AAEWAEIDLDAAMWRIRPERMKMKAAHLVPLSSQAVAILRDLHALTGGGH
HVFPGLRPNRPMSENTVNAALRALGYSGDEMTGHGFRSMAATRLNELGWN
ADAVERQLAHAETNKVREAYTHAAQYLHERVRMMQAWADYLDGLRSVGNV
VPLRAKAG
>XCVb0011 ISxac3 transposase
MIERCRDEFPIRLMCRCLKVSASGYYEWSKRPASARQLDNERLVVRMREL
HEDSRGTLGAGRMREDLAEEGETASLNRVARLMAADGLQGWPRRKRRGQR
GSPAVTPPGVVNLLERDFLALEPETKWVTDITEIKTQQGKLYLCIVLDLY
DQRIVGWSMHARQDRQMVIRAVQMAVWQRQGSDEVIVHSDRGSQFRSGDY
QRYLTANGLICSMSAVGHCGDNAACEGFFGLLKRERIYRTSYATLDGARA
DVFDYIERRHNPRMRRRAAKQDQKVAALLQPSVISG
>XCV2351 transposase
MEVEVWRPGGVRGTATARTRGREREAEEAAGRGDAGQRGAEGSSHKKMVT
PGAKREAVAHAREHHGLSERRACNLVGVSRRVIRYRSSRPDDGPLRQRLR
ELAAERRRFGYRRLGYLLAREGITPNHKKLLRVYREENLRVRRRGGRKRA
LGTRAPMVLPDGPNQRWSLDFVSDTLTCSRRFRILCVVDDYTRECLALVA
DTSLSGVRVARELTRLIGMRGKPHTVVSDNGTELTSSAILRWSQERRVEW
HYIAPGKPMQNGFVESFNGRLRDECLNETLFTSLPHARFVLDAWRHDYNH
VRPHSKLGGRTPAEKAGKPVWEHAPRQVAITSTNHHVGAGLYL
>XCVd0025 ISxac3 transposase (fragment)
MVDSEVSMSSKRYTDEFKIEAVRQVTDRGFKVAEVAERLGVTTHSLYAWL
RTFGKSGVVHRAEVDQSAEVRRLKAELRRVTEERDILKKAAAYFAKG
>XCV3547 conserved hypothetical protein
MQLPHARAPQRCAARQTCRLQWGMTHDPAANLPLKSDTFGRILLIRDGQR
MFVRRDLSVAPWLLRGVAWWLARREALALRQLDGVPRTPRLLHWDGRHLD
RSYLDGAAMYQRPPRGDLAYFRSARRLLQQLHRRGVAHNDLAKEANWLVQ
EDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVE
RRVLKRTSWVRELWFATGKPVYRFVTRRVLHWEDNEGQGPKP
>XCVc0011 ISxac2 transposase (fragment)
MKKSRFTDSQIIAVLKQAQAGAPVPELCREHGISSATFYKWRSKFGGMDV
SMVARMKELEEENRRLKKMYAEAQLSTDLLKEALAKKW
>XCV2722 IS1477 transposase
MKKSRFSTEQIIGFIKQADAGMAVAELCRRHGFSPASFYQWRAKYGGMEA
DEAKRLKELEVQNTRLKKLLAEAHLDIEALKVGFGVKR
>XCV2772 IS1477 transposase
MLEHTPLSERRACRLAGLSRDAFRHAPVPTPATQALSARLVELAQTHRRF
GYRRLHDLLRPEFPSVNHKKIYRLYEEAELKVRKRRKAKRPVGERQKLLA
SSMPNDTWSMDFVFDALANARRIKCLTVVDDFTRESVDIAVDHGISGAYV
VRLLDQAACFRGYPRAVRTDNGPEFTSRAFIAWTQQHGIEHILIEPGAPT
QNAYIESFNGKFRDECLNEHWFTSLAQARDVIADWRRHYNQIRPHSSCGR
IPPAQFAANYRTQQANNAVPFNPGLYQ
>XCVd0091 IS1477 transposase
MLEHTPLSERRACRLAGLSRDAFRHAPVPTPATQALSARLVELAQTHRRF
GYRRLHDLLRPEFPSVNHKKIYRLYEEAELKVRKRRKAKRPVGERQKLLA
SSMPNDTWSMDFVFDALANARRIKCLTVVDDFTRESVDIAVDHGISGAYV
VRLLDQAACFRGYPRAVRTDNGPEFTSRAFIAWTQQHGIEHILIEPGAPT
QNAYIESFNGKFRDECLNEHWFTSLAQARDVIADWRRHYNQIRPHSSCGR
IPPAQFAANYRTQQANNAVPFNPGLYQ
>XCV2617 IS1477 transposase
MKKSRFSTEQIIGFIKQADAGMAVAELCRRHGFSPASFYQWRAKYGGMEA
DEAKRLKELEVQNTRLKKLLAEAHLDIEALKVGFGVKR
>XCVb0014 IS1477 transposase
MPSAWFQPGQLLSVAGQVRGDGGRRGQAAERTGGPEHSIEEVAGRGAPGH
RSAEGWLRGKTLAPQRKREAIRRMLEHTPLSERRACRLAGLSRDAFRHAP
VPTPATQALSARLVELAQTHRRFGYRRLHDLLRPEFPSVNHKKIYRLYEE
AELKVRKRRKAKRPVGERQKLLASSMPNDTWSMDFVFDALANARRIKCLT
VVDDFTRESVDIAVDHGISGAYVVRLLDQAACFRGYPRAVRTDNGPEFTS
RAFIAWTQQHGIEHILIEPGAPTQNAYIESFNGKFRDECLNEHWFTSLAQ
ARDVIADWRRHYNQIRPHSSCGRIPPAQFAANYRTQQANNAVPFNPGLYQ
>XCV2716 IS1478 transposase
MRTRRPAAEQLPADELFRSRLENQIDLRHPLVQLIHRLPWSALEQALSPR
LPATPGTGGRPALPVRLIAGLLYLKHAYGLSDEAVCERWLENPYWQFFTG
EVVFQTCLPCDPSSLTRWRQRLGEAGMEELLAHTINTAHVMKAVDARELS
RVIVDTTVQEKAIAHPTDSGLLEVARKKLVLLAKRHGIALRQSYARLGPA
LRRKAGRYAHARQFKRMRKVLRRQRTVLGRVLRDLQRKLARLEPSVHEGI
SVWLERAHRLLTQRPKDKQKLYALHAPEVECMSKGKARQPYEFGVKVGIA
VSARKGLIVGARSFPGNPYDGDTLAEQLEQARGLLQDVNVIPQVAIVDLG
YRGRDVEGVQILHRGKANTLTRRQWRWIKRRQAVEPVIGHLKQDCRLNRC
HLKGAQGDALHVLGCAAGYNLRWLLRWIAFLRAWLQVVRARSSTPSSTMW
SANMALEV
>XCVd0108 ISxac2 transposase
MVRPSQRREMAQSAVTSGRTNIRHACQTFAVSETCFRYQAKASEENARIA
DWLVRLTSAHRDWGFGLCYLYLRNVKGFGWNHKRIYRIYRELELNLRIKP
KKRLVRERPEPLAVPEAINQVWSMDFMHDQLADGRSFRLFNVLDDFNREG
LGIEVDLSLPSARVIRSLEQIIEWRGKPAVIRCDNGPEYISGALLSWAQR
HGIRVEHIQPGKPQQNAYVERYNRTIRYAWLARTLFDTIDQVQDKATRWL
WTYKGFGEQWNREVS
>XCV2353 IS6100 transposase
MLGGDWTDGTMTDFKWRHFQGDVILWAVRWYCRYPISYRDLEEMLAERGI
SVDHTTIYRWVQCYAPEMEKRLRWFWRRGFDPSWRLDETYVKVRGKWTYL
YRAVDKRGDTIDFYLSPTRSAKAAKRFLGKALRGLKHWEKPATLNTDKAP
SYGAAITELKREGKLDRETAHRQVKYLNNVIEADHGKLKILIKPVRGFKS
IPTAYATIKGFEVMRALRKGQARPWCLQPGIRGEVRLVERAFGIGPSALT
EAMGMLNHHFAAAA
>XCVd0062 hypothetical protein
MMAQQLLLPAANEQQIEAKIEAILASRQHCNASGQAGEDVHLIRAQLSQK
SQESGTAHESVLATNHLTAKQSET
>XCV2758 putative excinuclease subunit (fragment)
MSIVHLAERDPAVIPWLYGLYSSPRAAQEALRRLADRDRLCYGLPGLERA
TDGRPCFRAMLKRCAGACHGAESLGDHEMRLRAALEHLEQAVWPFPGAVA
LKEEGKQLRQFHVLRNWHYLGSATSLAAARKLKTAPGDFDRDCYRILRKG
LQTHLHNVVLL
>XCV3360 IS1477 transposase
MLEHTPLSERRACRLAGLSRDAFRHAPVPTPATQALSARLVELAQTHRRF
GYRRLHDLLRPEFPSVNHKKIYRLYEEAELKVRKRRKAKRPVGERQKLLA
SSMPNDTWSMDFVFDALANARRIKCLTVVDDFTRESVDIAVDHGISGAYV
VRLLDQAACFRGYPRAVRTDNGPEFTSRAFIAWTQQHGIEHILIEPGAPT
QNAYIESFNGKFRDECLNEHWFTSLAQARDVIADWRRHYNQIRPHSSCGR
IPPAQFAANYRTQQANNAVPFNPGLYQ
>XCV3396 putative ATP-or GTP-binding protein
MDQESIVRYWHAVELLQPQSAPKLKKRSNPYEAFIHNTPIQRPLLPWTPE
SIIGKQELPKKRIWSHTLYAHLYDSRLVAEKLDAMYGADQGYQEPKFRES
AVFAAKFTAGGRLVDDSFVLSSEAWFLGRVLTGKDWTRGFETDQKTLRER
ANSQFEGEVSSEGLRELTHWTLQFLGLGDFFGEMDHHLFRFRSQPIKPDK
PESEDDPLNSFLLDDLADVADAISRGVKSEPLDQYLRHHDPKPRLHMDDQ
RASLPLMGRLMPDAYASSCWPTEHHLGLVHSQQLAVNTIQSTLADGQGLL
GVNGPPGTGKTTLLRDLIAAIITSRADALANLRRASDAFASNGRESANDG
GKQQHSFKLNPALYGFEIVVASSNNGAVENVTLELPQRDKIDESWLPEAE
YFAELGELVSGKPAWGLISGALGSKSRRNNFVDRYFYGQLPFGSEDKASA
EVEDETEVEPDEEVDVEALFSTPSAETEQADDSEYQSEDAPTEEDKGPKG
FWGWLNVSAEANAVRSPEGSPPFSRTFTRRPIKAMRSVHVKAQEVHCRVQ
AWRG
>XCV1862 IS1477 transposase
MKKSRFSTEQIIGFIKQADAGMAVAELCRRHGFSPASFYQWRAKYGGMEA
DEAKRLKELEVQNTRLKKLLAEAHLDIEALKVGFGVKR
>XCV3397 ISxac3 transposase
MSKRRKFTAEFKRGAVEQASQPGVSCAQVARELGIRDTLLTRWKREAQTP
GTAAFGGSGTPRDEELARLKRELARVKKERDFLREAATFFAKGSP
>XCV2804 hypothetical protein
MKLAFVDQGHTGEGPAEAADAEGIELHVGKLPEAKKGFMLLPRRWVVECS
FGWVNRFQRLAGNYEGLPETLAGLHFGVFSILMLGNTPISTSKFITRSSD
HRIEVAAGGVRRR
>XCV0622 IS1479 transposase
MQLTFGDAEGLGKRKQTRREIFLAEMEQVVPWQQLLGLVAPHYPVSGRPG
RQPYALATMLRIHLLQQWYALSDPAMEEALHEIPTLRRFAQLGGLDNVPD
ETTILNFRRLLETHGLAARMLEAVNAHLARKGQSLRSGTIVDATLIAAPS
STKNADHARDPEMHQTKKGNQWYFGMKAHIGVDEFSGLVHHVHCTAANVA
DVTVTHALLHGKEDSVFGDSGYTGADNREELQTCKAAFFIAARRSVLQAI
GNKRERAREQRWEHFKASVRAKVEHPFRVIKRQFGYTKVRYRGLAKNTAQ
VLTLFALSNLWMKRKQLLPAMGSVRL
>XCV2805 IS1477 transposase
MKKSRFSTEQIIGFIKQADAGMAVAELCRRHGFSPASFYQWRAKYGGMEA
DEAKRLKELEVQNTRLKKLLAEAHLDIEALKVGFGVKR
>XCV0063 putative protein kinase
MSIDHSNYRIVPTRVIGKGGFGIVQAVDLFNNANHKCGEYAIKTFSPPDQ
DHDEELLSRFSREVRYQASCAHENIAQIYMYNDKIQEPWFLMDLATCDLQ
YEISNNSLSDSEKIRIMKMTLQGIHYMHSRNLLHRDIKPRNILKFDSPLG
PVYKISDFGLAKNTDPAGESNLLTKIVLGWGTEKYMAPETQSAWDFSVKS
DIFSMGVVFEDLNPSETPALRKIIDKCTHRRPNLRYDSAQAIYEDLVAIA
V
>XCVd0135 hypothetical protein
MSALARLLDIPRAAPPHDLEHTLALLDDMRRQIDALGDISRNYGQLNHKL
KQRKLQDIHLKLRDMRDDLAQRVVPSIKET
>XCV2320 IS6100 transposase
MLGGDWTDGTMTDFKWRHFQGDVILWAVRWYCRYPISYRDLEEMLAERGI
SVDHTTIYRWVQCYAPEMEKRLRWFWRRGFDPSWRLDETYVKVRGKWTYL
YRAVDKRGDTIDFYLSPTRSAKAAKRFLGKALRGLKHWEKPATLNTDKAP
SYGAAITELKREGKLDRETAHRQVKYLNNVIEADHGKLKILIKPVRGFKS
IPTAYATIKGFEVMRALRKGQARPWCLQPGIRGEVRLVERAFGIGPSALT
EAMGMLNHHFAAAA
>XCV3404 RadC family DNA repair protein
MLAIGCGRAGRFACRFPRGAQRAGGEEPMKRTQDLKAQYQLQMDEEGILL
AAATILEQRLQRQGKIHSPDQAGDYLISRCAHLPHEVFGVVFLDIKHQIL
ATEHLFFGTIDGCEVHPRVVAKRALDLNAAAVILFHNHPSGNPEPSEADR
KVTERLQKALSLLDIRVLDHLVIGGRQHISLAARGWA
>XCV2690 ISxac3 transposase
MSKRRKFTAEFKRGAVEQASQPGVSCAQVARELGIRDTLLTRWKREAQTP
GTAAFGGSGTPRDEELARLKRELARVKKERDFLREAATFFAKGSP
>XCVc0022 putative TraI protein
MLNVTPIRGNNQYAAAHYFSAADDYYAKEHPGEWQGQGAQALGLTGPVEQ
AQLSRLLDGQLPNGERIQTTFDPTDNKKRMGLDLTFSAPKSVSMQALVAG
DKDVTAAHDRAVTRALEQVERLAEARKKVKGKSYRERTANMVIGKFRHEM
SRAKDPQLHTHAVVLNMTQRADGAWRALSNEDIFRVQHEVDALYKAELAR
GLQALGYAIRLVDDQGNFELDHISRDQIEAFSARSRVIEEALANEGKTRA
TATTLEKQIISLATRPRKDESDRELVKQYWVEKSRELGIDYGLRSQLDGR
TYEAGDSFGTRGRERGDAGDRIAATSLPASLTPAQAVVQYAINHLTEREA
VVRETALTATALRRAVGLAGPDEVRAEIKRLAGQGALIEAVPAYRMADRK
DGPALSSAGWKSYLQELKGWSDKQAQQYVGNAIKQGSLVPAEKRYTTQKA
LAREKAILAIERTGRGAIEPIMTAAAVKTALEGTALSAGQRSAVETIVST
KNRFVGIQGDAGTGKTYTVNQAVALIKQASAVSEGYRTVALAPYGNQVKA
LKNEGLEAHTLASFLRTKDKPIDGKTIIVLDESGVVGARQMEQVMRVVEK
AGARMVLLGDTKQTEAIEAGKPFAQLQQDGMQTARISEIQRQKDHELKTA
VEHAAEGRVTPSLAHIKHVEELKEPIERHRAIVNDYIQLTEPERRETLIV
AGTNEARREINRMVRQSLDLTGKGREFETLTRVDMTQAQRRFAPSYQPGM
VIQPEKDDQKAGLTRGETYRVKDALPGNALVLQRQDGTTTTINPRKATQL
SVYRLERAELSVGDTVRINRNDPGRDLTNGDRMRVAGVIGGVVKLESVEQ
RDGRPARALELPTNRPLHLEHAYASTVHSAQGLTNDRALIALDTNSRTTS
MNLYYVAISRACHEARVYTNSVKELPAAIARRFDKTTALAIQRERQLQRR
DAGMQPKGAADGKQALQRQQFQQQRKQPASGKKPSEYGRFG
>XCVd0096 putative cointegrate resolution protein S
MLKGIQTVHPSQEKRATPLQLTQLGQVVDWLDGAATAAGTRDDAAGRLRH
LRDRAFVLLGFWRGFRGDELVRLQVQDLELVAGEGMTCFLPHSKSDRQHA
GTTYKVPALSRWCPVAATMTWVAAAALHEGPLFRAVNQWGGIAAAPLHPN
SLVPLLRRIFREAGLSSPDDYSGHSLRRGFAGWANANGWDVKALMEYVGW
RDVHSAMRYLDGADPFARRRIEASLPEAPALPRPATT
>XCV1126 putative integrase
MRIPHHLVRAPFGLWSYRQRVPVDLQPIVGRQTFKRTLHTYDMREARLRA
LTLAARYAQVFTVLKERRMQSQDDDLDALLARLTGTQRPQELTLNRTRSA
DGSITEQWQIDTPEDVTLFQQLMALTAPQPSALGELIQQHVPPLPTPRRV
TKPSLESITLGKARDAWLNSLKGSTLPKTWTIKRTAVELLTSFLGEKTKL
HTVTRSDLARWYQDMREKGASTPTLTNKQSYIGGKGGFFEWAQASGHYPR
GDNPASGHVSYSTREKRARRKFGFKAYDAHQVQALFAPAAFEALPLAARW
ASLIGLYTGARASEVGQLLTADVVEEGGIPCFQISDEGEHQKVKTDKSLR
TVPIHPDLLALGFLTWVEQARAEGQERLFPAAKADAKNGQGNWISKAFSR
HLAEVGKNWPTAKRGFHSLRKTLIQELQGAGVVSELRAQLVGHELDDEHH
VTYSRAFTAKEKLDGLRGVSPGLSVLAYGLSLDAIRPLLSEASGNRKASG
ARAPR
>XCV2286 cytosine-specific DNA methyltransferase
MHPQPCAPLLYGSVCSGIEAVSLAWQPLGLEAAWFAEIEPFPSAVLAHHY
PHVPNLGDMTTIARQVHAGTVPAPDILVGGTPCQSFSVAGARRGLDDPRG
ALTLAYVELANAIDQARHQNDRSPATLVWENVPGVLSDRSNAFGNFLGAL
AGESRALQPPGKKWAHAGYVSGPRRRIAWRVLDAQYFGVAQRRKRVFLVA
SGGDGFDPVKVLFERTGLRGDSSAGSAPWQEAARAAGPSAEAAGGYAGLK
SSYGEVKTTFGFSGGIGPVDVAACLMAAGPKHDIRTETFMVQSVAGSITH
TLDTANGGKGSSEDGTGKGVPIIAFTAQGSGADATMDLTPTLRAGGHRSS
HANAGVVPAIAFAQNHRCEVRFESGHGQVACTVLSNGKPGYGVPMIACVA
LHDRQNGLAAELGSGANGHVLAPDHEAHFRYDWNDPIPRDWSQWRVRRLM
PVECERLQGMPDDYTLVPYRGKPAADAPRYKAIGNSMAMPCVAWLGQRLV
QCLHKMGSIASD
>XCV1139 ISxcc1 transposase
MRYQRRPDRDDEVIALLSELAERFPERGFGKLFQIIRRRGHVWNHKRVWR
VYCLMKLNQRRRSRRRVPTRHPQPLACGDRPNAGWSIDFMSDALWDGRRF
RTFNVIDDFSREALAIEVDLNLPAARVIRTLERIAAWRGYPNKLRLDNGP
EFVALALSEWAERKGIALDFIEPGRPMQNGFIERFNGSYRRGVLDMHLFR
TLSEVREQTEHWLADYNQQIPHDSLGGLTPAEFRDQHQPQTSSFSWH
>XCV2141 protein kinase
MTPRDHDTTGRTSPPDDDRTRVRPARDLADTPPQPPAVDDDVTRIAPLTQ
QRAAQASTDAATRINPPTHSDDSAGASSWRRVAQLQGESQVGVGMLLKAR
FLLVREIGRGGMGVVYLARDERKVEARDRHPYIAVKVLNDDFRRHPDSLI
ALQRESRRAQSLAHDHIVRVYDFDKDGAIVFMTMEYIEGDDLRGLIRSRL
GEGMPLAEAWPLIEGMGRALQRAHAAGIVHSDFKPGNVMVGAGNVAKVFD
FGIARAAKLAGAESGDDHTLFDAATLGALTPAYASLEMLRGDEPAFADDV
YAFGCVVYELLSGRHPFGKQSATQAQAQQLRVAPLSTLSRRQNRAMRSSL
AFAAAARPTMTVLLEQLRPRSRSERVLPYLLAGVLLLAGGAGAAVWLQVH
AQREKVAGVLERFSPQAPNRFVHEAHARAALWALGEDDRRRLILDRSSTI
EAFLLRRLDHYWQPARGREDYVGAQRILILRDQWKLFSPRLDARRSAMEQ
ERDGLLNGLDTALTGAIDAGALFEDQPGNVVALLDRVRRLAPDSGLLRHA
ELELRYRRGCADALSAGRIDEARRWLATGRRVFPHSTLLQECAHELDAAT
VTASVAPSVPPAPLVDDAQAQRAAQIATRIESVRTAAAANDVVKVKNQLA
QIAASSPEHPFLRSEGAQRLTDAYLGLARGLCREGRWKDASAVVGQGLDA
QDAPRLRQALARYQFALELEQLGTALPAPAVLQRLRERRMALQAQDADGF
RAFQSDVAKAGRQRASYTATLLPKLEPVAAAPATPTKPEDPCRVSAPPGG
AAICSDDLGKHGRGPELVVLPKPGRALAMMRREISVADFALFCADTKRCS
VSRWTRRSAPVDDVRLALIGDYAAWLSSVSGRKYRLPRDAEWLRAARAGE
RACTATVSNSWGLLDMAGGIAEWVQDGEGVAVRGSQRGAAACIGPGPVSS
DGEAARGIGARLVRELE
>XCV0125 IS1477 transposase
MLEHTPLSERRACRLAGLSRDAFRHAPVPTPATQALSARLVELAQTHRRF
GYRRLHDLLRPEFPSVNHKKIYRLYEEAELKVRKRRKAKRPVGERQKLLA
SSMPNDTWSMDFVFDALANARRIKCLTVVDDFTRESVDIAVDHGISGAYV
VRLLDQAACFRGYPRAVRTDNGPEFTSRAFIAWTQQHGIEHILIEPGAPT
QNAYIESFNGKFRDECLNEHWFTSLAQARDVIADWRRHYNQIRPHSSCGR
IPPAQFAANYRTQQANNAVPFNPGLYQ
>XCV1297 ISxac2 transposase
MKKSRFTDSQIIAVLKQAQAGAPVPELCREHGISSATFYKWRSKFGGMDV
SMVARMKELEEENRRLKKMYAEAQLSTDLLKEALAKKW
>XCV0615 conserved hypothetical protein
MARLPRIDLPGIPQHIVQRGNNRLPCFLDDGDRLRYLHLIHEALHATACQ
LHAYVLMDNHVHLLVTPPDAGRIGQLMQRLGRNYVALFNSRHGRTGTLWE
GRYKACLVDSADYVIRCYRYIELNPVRARLTDNPAAYRWSSCAANLGQRR
HSALTPHACWLALGSDPIERSNAYRALLDETLSDELLASIRLHLQQQRAL
GHDTFRAMVEAKTHRFAGVRPAHRPRNTNTTD
>XCV1846 ISxcC1 transposase
MRYQRRPDRDDEVIALLSELAERFPERGFGKLFQIIRRRGHVWNHKRVWR
VYCLMKLNQRRRSRRRVPTRHPQPLACGDRPNAGWSIDFMSDALWDGRRF
RTFNVIDDFSREALAIEVDLNLPAARVIRTLERIAAWRGYPNKLRLDNGP
EFVALALSEWAERKGIALDFIEPGRPMQNGFIERFNGSYRRGVLDMHLFR
TLSEVREQTEHWLADYNQQIPHDSLGGLTPAEFRDQHQPQTSSFSWH
>XCV2262 ISxac3 transposase
MIERCRDEFPIRLMCRCLKVSASGYYEWSKRPASARQLDNERLVVRMREL
HEDSRGTLGAGRMREDLAEEGETASLNRVARLMAADGLQGWPRRKRRGQR
GSPAVTPPGVVNLLERDFLALEPETKWVTDITEIKTQQGKLYLCIVLDLY
DQRIVGWSMHARQDRQMVIRAVQMAVWQRQGSDKVIVHSDRGSQFRSGDY
QRYLTANGLICSMSAVGHCGDNAACEGFFGLLKRERIYRTSYATLDGARA
DVFDYIERRHNPRMRRRAAKQDQKVAALLQPSVISG
>XCV3362 ISxcc1 transposase
MRKSKFTDSQIVATLKQVEGGRQVKDVCRELGISDATYYVWKSKYGGMEA
ADVQRLRDLETEHNKLKRMYAELAMENHALKDVIAKKL
>XCV1225 conserved hypothetical protein
MLWACILLPQLALDAVLRRLEEPQAPLALVEGPAQLRSLHSVNAAAGAAG
LKAGMRLSAAHALMTQVRTIDYDAQNEARTQRFLAAWAYRHSSLVSQQWS
RAIVLEAGASFRLFGPWPRFERRLRDELQALGFQHRLALAPTPRAARVLA
GLRDGMVVTQLPALHSTLDKVPVRRAALPDDAGERLQHMGVRTLAAVRGL
PRDGLRRRFGADLLDHLDRLYGQVDDPLECYAPPDHFDHRVELGYEVETH
PALLFPLRRLIGDLCTYLSIRDGGVQRFLLRLEHEEGATDVEIGLLTPER
APTLLFELARNRLERVEIPRPVVAMRLLARQLPPFVPAMRDLFDQRAQQS
VEWPQLRERLRARLGDDAVYRVLPADDPRPERAWRRAIGDAVREAAAPPR
PPRPTWLLPQPVPLHDPHLRIVSGPERLESGWWDDDEARRDYYVVETARG
RRGWAFAAPGRVDGWMLHGWFA
>XCV2817 IS1477 transposase
MKKSRFSTEQIIGFIKQADAGMAVAELCRRHGFSPASFYQWRAKYGGMEA
DEAKRLKELEVQNTRLKKLLAEAHLDIEALKVGFGVKR
>XCV2773 IS1477 transposase
MKKSRFSTEQIIGFIKQADAGMAVAELCRRHGFSPASFYQWRAKYGGMEA
DEAKRLKELEVQNTRLKKLLAEAHLDIEALKVGFGVKR
>XCV1121 Excinuclease subunit
MPSSAKRARRASIALDYAYPEHLRDCVEALPKTAGVYTFHGKEGLLPLYI
GKSVNVRTRVMDHCRTLEEASLLRQTTSVSCIPMAGDTGARLLEAQMVKR
QMPLYNKLLRKVPRQFSIRLYRGEVSIVHSAEYDVASSPMLYGLYSSPQS
AQKSLRRIADDHRLCYALVGLERLPSGRPCFRAMLKRCAGACSGGETLDD
HEERLRAALIRLELSTWPFHGRIALEEKGENLRQLHVLDAWHYLGTVTTL
TAARKLKGEPLGFDRDSYRIIRAAIESGLDAITVLGP
>XCV4206 putative protein kinase
MHEDTATVTELVTAMRRGALDLNAVLAALGKRAAVPEAEYRAGVETLWTL
QRQHLLDDATVTTLVSRLDALRDRAIAPAPAPSPTPTQQPTPTPTMVDDD
ATVVMPRPGPARMVEDDITRVQPAQPLPGDAPSLTSLGLGTPTHLGTQTG
TGTGTAGTASLSSWQHLAEAAGGDHAGVGSLLKGRFQLERELGRGGMGVV
YLARDERKVEARDRDPWLAVKVLSDEFRRHPDALVALQREARRSQKLAHD
NIVRVYDFDKDRTLVFMTMEYIDGCDLKTLIREQAYNGMPLKQAWPLIEG
MGRALMRAHAAGIVHSDFKPGNVMVTRDGVAKVFDFGIARAGKHAADVAG
EQTVFDAATLGALTPAYASLEMIRGQAPTPADDLYALGCVCFELLTGKHP
FDKLSAEVALREGRRPPPVPGLTRRQYATLCAAVAFPAAQRLTRVDQLLD
GLRQVPLRERALPLIGYGATALALVGVGGWGASRYLHQRHLDEVIARFGA
QDPQQYRDETQVMQALSSLSADDRRRVLMDRSDLIEDFLLRRLDALWNPA
NSRDDYRGALQVFALRDRLRLYSPALDARRQAIEREKNQRLNALDTTLNR
QLDAGLLFRTQPDNALATLDQVRRIDPGSSLLRHSALEVRLDAAIAQAVA
AGQLTTARTEVEQARAAFPDSLRLQLRSAEVGVAEQQAKRTPVAAAPRDA
DSARKALAADLANPSTDPAWRARIDAALAALPVAERSSQGSALAEAISTA
VAAQSDPAQLAGAQALVDVGLGVAPQSASLLAQRTRLQTLEHQLEQALAR
ESAESELAARIESLRRAAAANDLGKTRDALARIRTLQPDHPLLRSEGPQL
LSQVYRNTAGDAFAHGRYAQAADLLRQGLQTLGQRDELRSAQTRYAVAAA
VMTAGTLAPGERQQLAGRLQTLYRTDATALAQLEAQMKAAGQLPEGSLSA
RLQRAPAADAPADASVSPGGATETAAPAAGARPARGKSAAKPAATPTTAR
DPAAAALPANADDADSLPPVPTGPDPCAGLAGRAAACFDTLGQTRGPMLV
VIPAIAGGKPYALSRGEVAVADFNLFCQATGRCTAQAAATPELARAPVRN
ISLTLARAYLRWLTIGSGGWRYRLPSDAEWLHAAQAASNWRQAEDSNCVP
PNASAGDAARAPVSARGRDANPWGLINLTGNVWEWVSTGTGVQARGGSFS
SYWSDCTVQASRADNGSAQPDVGLRVLRELP
>XCV2158 ISxac3 transposase
MSKRRKFTAEFKRGAVEQASQPGVSCAQVARELGIRDTLLTRWKREAQTP
GTAAFGGSGTPRDEELARLKRELARVKKERDFLREAATFFAKGSP
>XCV1863 IS1477 transposase
MLEHTPLSERRACRLAGLSRDAFRHAPVPTPATQALSARLVELAQTHRRF
GYRRLHDLLRPEFPSVNHKKIYRLYEEAELKVRKRRKAKRPVGERQKLLA
SSMPNDTWSMDFVFDALANARRIKCLTVVDDFTRESVDIAVDHGISGAYV
VRLLDQAACFRGYPRAVRTDNGPEFTSRAFIAWTQQHGIEHILIEPGAPT
QNAYIESFNGKFRDECLNEHWFTSLAQARDVIADWRRHYNQIRPHSSCGR
IPPAQFAANYRTQQANNAVPFNPGLYQ
>XCV2476 putative IstB-like ATP binding protein
MSLEHTIDQLRTLKLTGMVAGVEHQLAQSSYGALGFDQRLGHLVDAEVSQ
RDSKRFTRLIRNAKLKVYAEPEAIDYRVGRGLDRSVIADLLTCGWIEHRQ
NVLVTGQTGTGKTWLACALAVQAARQGITVGYRRVGRLLEDMEVGHADGS
LAKLRNQLARTGLLILDDFGLTPLSSRGRADLLELLDDRVGSGATIVAGQ
MPVQDWHAFIHDPALADAIMDRLIHSSHKLALKGESMRKTKAAKSWK
>XCV3326 putative endonuclease
MQQALSCMHAAQSRMSGDNAPMDAPKPWHLYLLLCRNGSYYAGITNDLER
RFQAHLRGTGARYTRANPPVQLLASHRYPDRASASRAECALKRQPRARKL
AWLQAQPNGAESQPADASITRV
>XCV0950 conserved hypothetical protein
MTFQPSPSGHPGRDQRLLEQAHDVFVPALAQVFAAAVAHFDDVLFDRAES
AGASQLLFLDGMRELRRKREEVARQFRQQLEDGWQALVLGTPLSAEVVLA
GDMGSGPLSLVPEHVLESRLAVRNLATVLLRDFKQVLARVDRRLGWIAGG
LELMADTNPIGPEHLGVAIHEAFATCDLAPEVRLVLIKLCERDLAEPIGK
LYARLDETLAKAGVMPEISQAKRAPPRMQPRGETPEERAQVEAQGGHAEV
GGDDQGDQYAPAWANRFLDRWAHSRGRMQAATQRGHADGGGAGGMDGEAD
HPGGSQGMLLEALHELLQQTRSVRDTAASAATVAVGQQRPLSQREMMSVL
SLLQATPSATLQAAIGDDTESLAQRLKNEVLSSATRLGVDPATAKLDPMD
EDAIDLVGMLFDVMLDERDLENRSREMIGRLVVPFVKVALLDRKMFVQKT
HPARRLLNSLAEACEGNNGDSAAERVLMGKVEEIVDRLVAEFNENLAIFL
TLEEEFRDFLSQHRRRVEIAERRATETQRGQEKLELARSRALSELEQRAP
EDAGLPKAVDDFLRQPWLHHLTMAILRDGEEGPGTIEALALADGVLEELA
EARRHIVGKPWLQVWQPALHRVFASVGLHGDAVVVAITALHDTLQAIAEA
RPELEKALPELPQVNLPPPAAESVSVVLGAEAVAQSIDSADAERFRAMDI
GTWLDFVDKDGKVQAGKLSWVSPISQRLLFVNRRGVRFCVASPEELAVMV
RLGRLREHINDGAFDSAMQGVIDRLDPLQNNSTVH
>XCV2713 putative transposase (fragment)
MLARRGDRGRHVHSCAQLDKSKDCQGDPDMYQTKKSHHYYFRMKAHIGVD
DDPEDGAPRRIHGSQRRRYHAAHKLLHGREDTLCGNSGYNGL
>XCV1097 IS1477 transposase (fragment)
MKKSRFSTEQIIGFIKQADAGMAVAELCRRHGFSPASFYQWRAKYGGMEA
DEAKRLKELEVQNTRLKKLLAEAHLDIEALKVGFGVKR
>XCV0126 IS1477 transposase
MKKSRFSTEQIIGFIKQADAGMAVAELCRRHGFSPASFYQWRAKYGGMEA
DEAKRLKELEVQNTRLKKLLAEAHLDIEALKVGFGVKR
>XCV4024 conserved hypothetical protein
MMDCPPMLPLSRRGQPVTMSTALRHRLLSTPTLEATYWHLRLPTHQRVPL
FADWRCARAAAASLALPRHWQGAQLLCWVLLPEAWCGLLQAPSKAVLLQL
AETARLRTADAVNRARGRGGTVWQPQMQVSALPQQSDHRQFARTLVALPL
RAGLAEQVGEYPYWDAVWLLTDGHDAASITTHCDRAEPTGTGATHG
>XCV2618 IS1477 transposase
MLEHTPLSERRACRLAGLSRDAFRHAPVPTPATQALSARLVELAQTHRRF
GYRRLHDLLRPEFPSVNHKKIYRLYEEAELKVRKRRKAKRPVGERQKLLA
SSMPNDTWSMDFVFDALANARRIKCLTVVDDFTRESVDIAVDHGISGAYV
VRLLDQAACFRGYPRAVRTDNGPEFTSRAFIAWTQQHGIEHILIEPGAPT
QNAYIESFNGKFRDECLNEHWFTSLAQARDVIADWRRHYNQIRPHSSCGR
IPPAQFAANYRTQQANNAVPFNPGLYQ
>XCV2329 IS6100 transposase
MLGGDWTDGTMTDFKWRHFQGDVILWAVRWYCRYPISYRDLEEMLAERGI
SVDHTTIYRWVQCYAPEMEKRLRWFWRRGFDPSWRLDETYVKVRGKWTYL
YRAVDKRGDTIDFYLSPTRSAKAAKRFLGKALRGLKHWEKPATLNTDKAP
SYGAAITELKREGKLDRETAHRQVKYLNNVIEADHGKLKILIKPVRGFKS
IPTAYATIKGFEVMRALRKGQARPWCLQPGIRGEVRLVERAFGIGPSALT
EAMGMLNHHFAAAA
>XCV2340 IS6100 transposase
MLGGDWTDGTMTDFKWRHFQGDVILWAVRWYCRYPISYRDLEEMLAERGI
SVDHTTIYRWVQCYAPEMEKRLRWFWRRGFDPSWRLDETYVKVRGKWTYL
YRAVDKRGDTIDFYLSPTRSAKAAKRFLGKALRGLKHWEKPATLNTDKAP
SYGAAITELKREGKLDRETAHRQVKYLNNVIEADHGKLKILIKPVRGFKS
IPTAYATIKGFEVMRALRKGQARPWCLQPGIRGEVRLVERAFGIGPSALT
EAMGMLNHHFAAAA
>XCV3689 conserved hypothetical protein
MSEPMWSDLQVSYLQALGHTVYLDRAAVDALPAPVEVAERAPTAAPTRME
RAPYPATANAPVARRNAPAAPAQAPRAPSTAPASAPQRRSRVGMPDRLQM
ALLRASGCNPGDPATQALMASWPLAELRGNPAAKRALWPQLRALRRRRDP
A
>XCV0018 conserved hypothetical protein
MQKNSFPGTSAAAERDVRSSRTVIKGRGTTAYVPGRFAVTTAVEIDDGWG
ALDADGEAAMRPKTVVAEEIARSIISRNNSPDIGFSQSVNPYRGCEHGCV
YCFARPSHAYLDLSPGLDFETRIFAKPNAAALLRAEIARPSYQCSPIALG
INTDAYQPTERRLHISRQCLQVLAQARHPVSFVTKAALIERDIDVLAEMA
QHNLVSVYFSVTTLDNRLAAKMEPRAAAPHARLRAMQALHAAGVPVGVLV
APVIPMINDKELERILEAAAAHGARSAGYVLLRLPHELTQLWREWLELHY
PDRAKHVMSLIQQMRGGKDYDSRFGKRMVGEGPFAELIAQRFSIAYRRLG
FGRLPRLDTTQFRPPRPDTPQLNLF
>XCV2609 hypothetical protein
MHDEKHCRKSAAVARAPLGIEDPRTAGASIQQRSEDDERKRNFRGGNPRP
LAVQWALAGDAPR
>XCV1114 ISxcc1 transposase
MRYQRRPDRDDEVIALLSELAERFPERGFGKLFQIIRRRGHVWNHKRVWR
VYCLMKLNQRRRSRRRVPTRHPQPLACGDRPNAGWSIDFMSDALWDGRRF
RTFNVIDDFSREALAIEVDLNLPAARVIRTLERIAAWRGYPNKLRLDNGP
EFVALALSEWAERKGIALDFIEPGRPMQNGFIERFNGSYRRGVLDMHLFR
TLSEVREQTEHWLADYNQQIPHDSLGGLTPAEFRDQHQPQTSSFSWH
>XCV1300 IS1477 transposase
MLEHTPLSERRACRLAGLSRDAFRHAPVPTPATQALSARLVELAQTHRRF
GYRRLHDLLRPEFPSVNHKKIYRLYEEAELKVRKRRKAKRPVGERQKLLA
SSMPNDTWSMDFVFDALANARRIKCLTVVDDFTRESVDIAVDHGISGAYV
VRLLDQAACFRGYPRAVRTDNGPEFTSRAFIAWTQQHGIEHILIEPGAPT
QNAYIESFNGKFRDECLNEHWFTSLAQARDVIADWRRHYNQIRPHSSCGR
IPPAQFAANYRTQQANNAVPFNPGLYQ
>XCVd0024 ISxac3 transposase
MCRVLRVNRSGYYAWLCSPNSERAKEDDRLLGLIKHHWLASGSVYGHRKI
TTDLRDLGERCSRHRVHRLMRTEGLRAQVGYGRKPRFHGGMQCKAAANLL
DRQFDVTEPDTAWASDFTFIRTHEGWMYLAVVIDLFSRQVVGWAMRDRAD
TELVVQAVLSAVWRRKPNAGCLVHSDQGSVYTSDDWRSFLASHGLVCSMS
RRGNCHDNAPVESFFGLLKRERIRRLTYPTKDAARAEVFDYIEMFYNPNR
RHGSTGDLSPVEFERRYAQRGS
>XCV2171 DNA-3-methyladenine glycosylase I
MPENPSCERCSWAQNDPLMRDYHDAEWGVPQRDPRMLWEMLMLEGFQAGL
AWITILRKREAFRAAFAGFDPVKVAAFDEQDIERLMANPGIVRARAKIEA
TIKGARIYCDMQDRGEDFSAFCWSFTAGVPILGDGVSLVASTPLSENISR
ELKRRGFKFVGPTIIHAWMQAVGIVNDHSLGCFRRHLEHQGTR
>XCV2322 transposase
MTSDTPPIAAQGVATLPDEAWAQARHRTEIIGPLAALEVVGHEAADEAAQ
ALGLSRRQVYVLIRRARLGSGLVTDLALGQSSGGKGKGRLPEPVERIIRE
LLQKRFLTKQKRSLAAFHREVAQACKTQKLPVPARNTVAQRIAGLHPAKI
ARSRGGQDAARPLQGAGGIPPEVTMPLEQVQIDHTVIDLIVVDERDRQPI
GRPYLTLAIDVFTRCVLGMVVTLEAPSAVSVGLCLAHAACDKRPWLEGLN
VEMDWPMSGKPRLLYLDNAAEFKSEALRRGCEQHGIRLDYRPPGQPHYGG
IVERIIGTAMQMIHDELPGTTFSNPGQRGEYDSEKMATLTLRELERWLAL
AVGTYHGSVHNGLLQPPAARWAEAVERVGVPAVVTRPTAFLVDFLPVIRR
TLTRTGFVIDHIHYYADALKPWIARRERLPAFLIRRDPRDISRIWVLEPE
GQHYLEIHYRTLSHPAVTLWEQRQALAKLRQLGREQVDESALFRMIGQMR
EIVTTAQKATRKARRDADRRQHLKTSEPPAKPIPPDVDMADPQADNLPPA
KPFDQIEEWSPSMNIRGLAMECSRT
>XCVd0090 IS1477 transposase fragment
MKKSRFSTEQIIGFIKQADAGMAVAELCRRHGFSPASFYQWRAKYGGMEA
DEAKRLKELEVQNTRLKKLLAEAHLDIEALKVGFGVKR
>XCV1394 ATP-dependent DNA ligase
MKRFAALYRALDRSTGTLDKRAALVAYFRDAPALDAAWALYLLAGGKVAS
ARMRIASSGELREWITDTAGVADWLVADSYDHVGDLAETLALLLDDPVAE
AADLPLAEWIEQRLLPIANQDVQVRKACIVQAWRSLAFDERLVFNKLLTG
ALRVGVSQRLVQQALAELSGVDIARIAQRMLGSWRPHPTYLADLLTSEEL
PGDRQQPYPFFLASPLEAEVDTLGAIDDWLLEWKWDGIRLQLIRRAGEAA
LWSRGEERLDGRFPEIEHAALQLPDGTVIDGELLAWQPEQPLPMPFTALQ
TRIQRLKPGPKTLAAAPARVVAYDLLELAGEDLRERPLQERRALLEGVLA
TLADPRIVASPLVQVSDWQAAAQVRVEARERGVEGLMLKRASSVYQSGRR
RGDWWKWKIDPLTIDAVLLYAQAGHGRRSTLYTDYTFGLWHEGQLVPIAK
AYSGLDDKEILQLDRWIRANTTERFGPVRAVTAHHVFELGFEAVNRSARH
KSGIAVRFPRILRWRHDKPMAEADHLSTLQALAR
>XCV3096 ComEA-related DNA uptake protein
MWRGTLAPPAGMLARTITQATRSVAMKSFTVVLKSLLLALLLSSNAYALD
KVDINTASAEELDKVLMNVGRSKAEAIVEHRQANGPFKSAEELALVKGIG
LKTVERNRDLIEVGATMAPAKKAAKGAAVKPVGRR
>XCV2274 putative integrase
MISVAQYLEAATRPNTERAYAAATRHFEVEWGGHLPATADNVARYLAAYA
GQLAINTLKHRLAALAQWHRVHGFADPTRAPVVRQVLKGIQTLHPSVEKR
ATPLQLTQLGQVTTWLEDAAAAARSRGDRASELRHLRDRAFLLLGFWRGF
RGDELARLQVDHLRLVPGEGMTCFLPHSKGDRRHAGTTYKVPALSRWCPV
ASTSSWIAAAALTDGPVFRAINQWGGVADTALHPNSLVPLLRRIFGEAGL
ASPNTYSGHSLRRGFAGWANANGWDVKSLMEYVGWRDVHSAMRYLDGGDA
FARERIEASLPPIVAPLLSLPTQATAVEPTTVLEAQLTLTPLTPRGRGAK
KTHRLIETLCLQPHGAQRLERDGSRYRLTVAAADEAALEETIAILLDDMH
RIADNHHCFLAIALHDAAGHRHWD
>XCV3384 ISxac3 transposase
MSKRRKFTAEFKRGAVEQASQPGVSCAQVARELGIRDTLLTRWKREAQTP
GTAAFGGSGTPRDEELARLKRELARVKKERDFLREAATFFAKGSP
>XCV2816 IS1477 transposase
MLEHTPLSERRACRLAGLSRDAFRHAPVPTPATQALSARLVELAQTHRRF
GYRRLHDLLRPEFPSVNHKKIYRLYEEAELKVRKRRKAKRPVGERQKLLA
SSMPNDTWSMDFVFDALANARRIKCLTVVDDFTRESVDIAVDHGISGAYV
VRLLDQAACFRGYPRAVRTDNGPEFTSRAFIAWTQQHGIEHILIEPGAPT
QNAYIESFNGKFRDECLNEHWFTSLAQARDVIADWRRHYNQIRPHSSCGR
IPPAQFAANYRTQQANNAVPFNPGLYQ
>XCV1098 IS1477 transposase (fragment)
MLEHTPLSERRACRLAGLSRDAFRHAPVPTPATQALSARLVELAQTHRRF
GYRRLHDLLRPEFPSVNHKKIYRLYEEAELKVRKRRKAKRPVGERQKLLA
SSMPNDTWSMDFVFDALANARRIKCLTVVDDFTRESVDIAVDHGISGAYV
VRLLDQAACFRGYPRAVRTDNGPEFTSRAFIAWTQQHGIEHILIEPGAPT
QNAYIESFNGKFRDECLNEHWFTSLAQARDVIADWRRHYNQIRPHSSCGR
IPPAQFAANYRTQQANNAVPFNPGLYQ
>XCV4176 IS1479 transposase
MQLTFGDAEGLGKRKQTRREIFLAEMEQVVPWQQLLGLVAPHYPVSGRPG
RQPYALATMLRIHLLQQWYALSDPAMEEALHEIPTLRRFAQLGGLDNVPD
ETTILNFRRLLETHGLAARMLEAVNAHLARKGQSLRSGTIVDATLIAAPS
STKNADHARDPEMHQTKKGNQWYFGMKAHIGVDEFSGLVHHVHCTAANVA
DVTVTHALLHGKEDSVFGDSGYTGADNREELQTCKAAFFIAARRSVLQAI
GNKRERAREQRWEHFKASVRAKVEHPFRVIKRQFGYTKVRYRGLAKNTAQ
VLTLFALSNLWMKRKQLLPAMGSVRL
>XCV0227 hypothetical protein
MAHGSIAEQWEGGLRELRLVHHKPASPNADQGGCYHDEAYWFAAKRYTVS
DLPLTSFVGPDGLVTLLAFLADRRFADPNEVLELIKRLHVPNYEGARNSF
EAAIAEGVFEPRSTPGYYDQRELLAVLNWISNEQ
>XCVc0037 Tn5045 transposase
MPVSFLSTTQRERYGRYPDTLSSEELARYFHLDDDDREWIATKRRDSSRL
GYALQLTTARFLGTFLEDPTAVPSPVLHTLSSQLGIADPSDCVIDYRTTR
QRWQHTSEIRTRYGYREFTGTGVQFRLGRWLCALCWTGTDRPSALFDYAN
GWLVGHKVLLPGVTLLERFIAEIRSRMESRLWRLLVHGVTPEQRQRLDDL
LKLVEGSRQSWLDRLRKGPVRVSAPALVAALLRIETVRGLGIKLPGTHVP
PSRIAALARFASTAKVSAVARLPEVRRIATLVAFVHCLEASAQDDAIDVL
DLLLRELFTKAEKEDRKVRQRSLKDLDRAASTLAEACRMLLDPALPDGEL
RERVYAAIGHDELAQALNEVRGLVRPPNDVFYTELEARKATVSRFLPALL
RVIRFDANPAAQPLAQALQWLHEKPDHDPPTAIVGKAWQRHVVQDDGRIN
ATAYSFCALDKLRSAIRRRDVFISPSWRYADPRAGLLAGAEWEASRPIVC
RSLSLSAQPEATLSELTRELDETYRRVAARLPQNDAVRFENVGDKTELVL
SPLEALEEPPSLIALRNEIKARMPRVDLPEILLEVAGRTGCMEAFTHLTE
RTARAADLTTSLCAVLMAEACNTGPEPLVRPDTPALKRDRLMWVDQNYVR
DDTLTACNAVLVAAQSRIALARTWGGGDVASADGMRFVVPVRTIHAGPNP
KYFNRGRGVTWYNLLSDQRTGLNAITVPGTLRDSLILLAVVLEQQTELQP
TQIMTDTGAYSDLVFGLFRLSNYRFCPRLADVGGTRFWRVDPDADYGDLN
ALARQRVNLDRITPHWDDVLRLVGSLKLGLVPAMGIMRTLQVDERPTSLA
QAIAEIGRIDKTIHTLNFIDDEARRRATLLQLNLGEGRHSLAREVFHGKR
GELFQRYREGQEDQLSALGLVVNMIVLWNTLYMDAVLTQLRSEGYPVKPE
DEARLSPFGHEHINMLGRYSFSVPEAVARGELRPLTKPNDP
>XCV1296 ISxac2 transposase
MVRPSQRREMAQSAVTSGRTNIRHACQAFAVSETCFRYQAKASEQNARIA
DWLVRLTTAHRDWGFGLCYLYLRNVKGFGWNHKRVYRIYRELELNLRIKP
RKRLVRERPEPLAVPEAINQVWSMDFMHDQLADGRSFRLFNVLDDFNREG
LGIEVDLSLPSARVIRSLEQIIEWRGKPAVIRCDNGPEYISGALLSWAQR
HGIRVEHIQPGKPQQNAYVERYNRTIRYAWLAQTLFDTIDQVQDKATRWL
WTYNHERPNMALGGITPAMKLAMAA
>XCV2806 IS1477 transposase
MLEHTPLSERRACRLAGLSRDAFRHAPVPTPATQALSARLVELAQTHRRF
GYRRLHDLLRPEFPSVNHKKIYRLYEEAELKVRKRRKAKRPVGERQKLLA
SSMPNDTWSMDFVFDALANARRIKCLTVVDDFTRESVDIAVDHGISGAYV
VRLLDQAACFRGYPRAVRTDNGPEFTSRAFIAWTQQHGIEHILIEPGAPT
QNAYIESFNGKFRDECLNEHWFTSLAQARDVIADWRRHYNQIRPHSSCGR
IPPAQFAANYRTQQANNAVPFNPGLYQ
>XCV0229 ISxac2 transposase
MKKSRFTDSQIIAVLKQAQAGAPVPELCREHGISSATFYKWRSKFGGMDV
SMVARMKELEEENRRLKKMYAEAQLSTDLLKEALAKKW
>XCV2166 conserved hypothetical protein
MSDKIKSVPSVSVTYARNGASTKANALGMRPMQERAYEKRGEQYLLIKSP
PASGKSRALMFVALDKLRNQGLKQAIIVVPEKSIGASFNDEPLSRYGFWS
DWHVEPKWNLCNAPGNDNGGKVKSLGAFLEGDDKVLVCTHATFRFAVDAY
GVEAFDDRLIAVDEFHHVSANPDNKLGLHLGLFFARGKTHIVAMTGSYFR
GDAEAVLAPQDESKFDTVTYTYYEQLNGYEYLKQLDIGYFFYSGPYVDDI
LNVLDPAEKTIIHIPNVNSRESTKDKMREVEHIIEALGEWQGIDAATGFQ
LVKRPDGRVLRIADLVDDDAAKRDRVSAALKDPAQKNNRDYVDIIIALGM
AKEGFDWIWCEHALTVGYRASLTEIVQIIGRATRDAPGKTRARFTNLIAE
PDAAEEAVTEAVNDTLKAIAVSLLMEQVLAPRFEFKPKNPDSGPTPGFNY
GEGGYDADRCNVDVNEQTGAYQIEIKGLAEPKSKEAARICQEDLNEVIAA
FVQDKPTIERGLFDEELVPEELTQVRMGKIIKDKYPELDAEDQEAVRQHA
IAALNLTQQAKRLVTEGESDGSPNTALIDGVRRFAMDVRELDIDLIDRIN
PFGEAYAILAKTMSEDSLKQVAAAISAKRTSLTPDEAKEMAVRAVQFKKE
RGRVPALDSQDAWERRMAEGAAAFMRFKAEGRYE
>XCV2250 putative secreted protein
MRKGIALIVGVTGISGYNLANVLLADGWTVYGLARRPLPHDGVIPVAADL
LDADSTNSALRGLPITHVFFCTWTRRDTERENVQANGAMMRHLCDALSDA
PLQHMALVTGTKHYLGAFENYGSGKAETPFRESEPRQPGENFYYTLEDLL
FAHAQQHGFGWSVHRSHTMIGMANGSNAMNMGVTLAVYASLCKHTGQPFV
FPGSQAQWNSLTDLTDAGLLGRQLAWAGLSPAARNQAFNTVNGDVFRWRW
MWGEIAKFFQLDAAPCPAVPEPLEPRMSQTAPALWAEVAAQHQLVESDVN
RLASWWHTDADLGREIECVNDMTKSRELGFLDFYDSRASFFELFTRLRAL
RIIP
>XCV2883 putative NUDIX hydrolase family protein
MIPSATGNPQVRIRSIDVLSDNWYVLRKVTFDFQRKDGRWQTLSREAYDR
GNGATILLYSRAKQTVMLTRQFRLPTLLNGNPDGMLIEACAGLLDQDDAL
TCIRKETEEETGYRIDNVRKVFEAFMSPGSVTERLYFFVGEYVDGDKVSC
GGGLEEDGEEIEVLELSLDAALAMIGSGKIADAKTIMLLQYAKLHGVLES
VHANTR
>XCVd0128 histone-like family DNA-binding protein
MNKSALASAIAHRHAMTQAEASSIVDTVTEVVALMLLEHGRVNINRFGRF
RLQHKPPRQARNPKTGETVQVGERVAVQFTAADELKRRFLDSKNGNRLE
>XCV2478 ISxac3 transposase
MIERCRDEFPIRLMCRCLKVSASGYYEWSKRPASARQLDNERLVVRMREL
HEDSRGTLGAGRMREDLAEEGETASLNRVARLMAADGLQGWPRRKRRGQR
GSPAVTPPGVVNLLERDFLALEPETKWVTDITEIKTQQGKLYLCIVLDLY
DQRIVGWSMHARQDRQMVIRAVQMAVWQRQGSDEVIVHSDRGSQFRSGDY
QRYLTANGLICSMSAVGHCGDNAACEGFFGLLKRERIYRTSYATLDGARA
DVFDYIERRHNPRMRRRAAKQDQKVAALLQPSVISG
>XCV1118 ISxac3 transposase
MSKRRKFTAEFKRGAVEQASQPGVSCAQVARELGIRDTLLTRWKREAQTP
GTAAFGGSGTPRDEELARLKRELARVKKERDFLREAATFFAKGSP
>XCV4220 putative protein kinase
MSLAATAWQRLEALFHQACQLPAAEREAFARAQAGDDASVRDQLLAMLAV
ESQATLRVRAPLKQAAAALRAPLPELPAGTRFGAWAIDRLIGAGGMGQVY
LGHRADGAYEREVAIKLVAADALDAQGRALFEFECRLLAQMVHPAIAQIH
DVGTDAHGQPYLVMEYLRGEPITWWCDQHRLSLHARVLVMLRVSEAVQHA
HQKGVIHRDLKPSNVLVSEIDGRPMPGVIDFGIAIDATNPGMTYAHDRGT
PGYMSPEQARGAPDVDARSDIYALGAMFYELSCGLAPVAGRDGVPQPPSQ
RLATVPADARARICAARATTYQKLHEHLRDGLDAIVLRALEPQPGARYAS
VSALLDDLHRWLDGYPPRALQASRWLRLRKFTQRHRSGVAAAGLAAVAVV
AGLGATLWSLQQAARDAQRAQVTGDFMSSVLSSVDPGVARDLDKTLMLRV
LQQASQRAARELADQPDARTQVELTLGRTLIALANFAQAVEHLRIAQTLA
QQTAGAGSLPALKATSMLGQALTGDGKPGDAERVLRQGIAQAARGDAQQQ
AMGNELRAWLAWALREQGRMRDALAESRHAYVAALANASSSADQRIDAGN
SYAAMLADNGQLVPAIALQRSLLRERMAMHGPEHPLVVSMRNSLAVFLLM
QRDFAGAEAELVPLLQVARALYGESAADTLMVEGNLAGALRQQGKLAEAG
PYYRRTLERARAAFGNDAPATIAYRSNHAFWLLDDGQVEASLAEQRAALA
ASERVLGRAHPQTAEILRGMSEAERRLGQTVAARDHAQQALQILTGIFGN
ADQPLRAARQTLALATPPVDTSEAQTTTSVAQR
>XCV0618 transposase
MHLQTYQAYGALRMWQALRQHGETCGRHRVERLRRAHGIRSKRRQRYLRT
RSTYQRTMVAPNRLAWPFVSPGRDRVWVADITFVPTRGGWLYLAAILDMH
SRHLAGWAMGARADQALASAALEMALQRRRPSKGTIHHSDQGSQYTSGAY
QRQLQAAGLVASMSRKGMPYDNAVMESFFSSLKQELTHHEQFVSLDEARA
KLFTYIEVFYNRQRLRSALGYRSPVEFERTDVP
>XCV2434 IS1478 transposase
MRTRRPAAEQLPADELFRSRLENQIDLRHPLVQLIHRLPWSALEQALSPR
LPATPGTGGRPALPVRLIAGLLYLKHAYGLSDEAVCERWLENPYWQFFTG
EVVFQTCLPCDPSSLTRWRQRLGEAGMEELLAHTINTAHVMKAVDGNPPI
PSIGDGGMRYLPYGLLEKRLHHSIARGITIVSSLCPTKVP
>XCVd0107 ISxac2 transposase (fragment)
MKKSRFTDSQIIAVLKQAQAGAPVPELCREHGISSATFYKWRGKFGGMDV
SMVARMKELEEENRRLKKMYAEAQLSTDLLKEALAKKW
>XCV3412 ISxac2 transposase
MVRPSQRREMAQSAVTSGRTNIRHACQTFAVSETCFRYQAKASEENARIA
DWLVRLTTAHRDWGFGLCYLYLRNVKGFGWNHKRIYRIYRELELNLRIKP
KKRLVRERPEPLAVPEAINQVWSMDFMHDQLADGRSFRLFNVLDDFNREG
LGIEVDLSLPSARVIRSLEQIIEWRGKPAVIRCDNGPEYISGALLSWAQR
HGIRVEHIQPGKPQQNAYVERYNRTIRYAWLARTLFDTIDQVQDKATRWL
WTYNHERPNMALGGITPAMKLAMAA
>XCV0222 IS1477 transposase
MLEHTPLSERRACRLAGLSRDAFRHAPVPTPATQALSARLVELAQTHRRF
GYRRLHDLLRPEFPSVNHKKIYRLYEEAELKVRKRRKAKRPVGERQKLLA
SSMPNDTWSMDFVFDALANARRIKCLTVVDDFTRESVDIAVDHGISGAYV
VRLLDQAACFRGYPRAVRTDNGPEFTSRAFIAWTQQHGIEHILIEPGAPT
QNAYIESFNGKFRDECLNEHWFTSLAQARDVIADWRRHYNQIRPHSSCGR
IPPAQFAANYRTQQANNAVPFNPGLYQ
>XCV1196 putative serine/threonine protein kinase
MKQISGNFTLPSTALRADAERDAPETAQAPEPHTPPHPVADHPLNLLEKR
RSITGVLADERKRLEVVVPRLQAALAPHTWSSSSSDSPTTPVTGRSPRLG
PQPGSPTWACLLETPARLSALAGADSSDAFQNLRNARRLVSDTRHARQHV
VLSPRLVKSLTSRSERPDLIQKLSALKPGALDVDNGFLHVTLETGHAGTA
GTLDAMPTVGTGASASTYAVRLAEDLWQGGQNCGRDFIFKALLRTDPQRP
IPPTLCDPATAADAPALQQRVAERKAMIFQEYQMIRSVDAVPYIVRAHGV
VQIEHTFGILLEKIDGISVRSMIGRARTALQQGAISAMEYLGLARQLMAD
VLVGIACCEDAGIVHQDISHNNVMYDQPMKIFRLIDMGLGAEEGDPNRGG
TPGFYDLSTPARHARDVYSVAQLLVHVLKRPDYNMGMIGINRAKTADTFP
FMDALQALPADHKRIVVRFFNSMLDDGTGERTKAERLLRDPFFTEPPLPP
RDRMHRTYEKLKRLPSF
>XCV2157 ISxac3 transposase
MIERCRDEFPIRLMCRCLKVSASGYYEWSKRPASARQLDNERLVVRMREL
HEDSRGTLGAGRMREDLAEEGETASLNRVARLMAADGLQGWPRRKRRGQR
GSPAVTPPGVVNLLERDFLALEPETKWVTDITEIKTQQGKLYLCIVLDLY
DQRIVGWSMHARQDRQMVIRAVQMAVWQRQGSDEVIVHSDRGSQFRSGDY
QRYLTANGLICSMSAVGHCGDNAACEGFFGLLKRERIYRTSYATLDGARA
DVFDYIERRHNPRMRRRAAKQDQKVAALLQPSVISG
>XCV0354 ISxac3 transposase
MIERCRDEFPIRLMCRCLKVSASGYYEWSKRPASARQLDNERLVVRMREL
HEDSRGTLGAGRMREDLAEEGETASLNRVARLMAADGLQGWPRRKRRGQR
GSPAVTPPGVVNLLERDFLALEPETKWVTDITEIKTQQGKLYLCIVLDLY
DQRIVGWSMHARQDRQMVIRAVQMAVWQRQGSDEVIVHSDRGSQFRSGDY
QRYLTANGLICSMSAVGHCGDNAACEGFFGLLKRERIYRTSYATLDGARA
DVFDYIERRHNPRMRRRAAKQDQKVAALLQPSVISG
>XCV2327 putative resolvase
MLIGYARVSKADGSQSLDLQHDALRAAGVERDNIYDDLASGGRDDRPGLT
ACLKSLRDGDVLVVWKLDRLGRSLAHLVNTVKELSDRKIGLRVLTGKGAQ
IDTTTASGRMVFGIFATLAEFERDLIRERTMAGLASARARGRKGGRKFAL
TKAQVRLAQAAMAQRDTSVSDLCKELGIERVTLYRYVGPKGELRDHGKHV
LGLT
>XCVc0040 Site-specific recombinase / resolvase family protein
MKIGYARVSTREQNPALQVDSLKAAGCERIYQDVASGAKTARPALDELLG
QLRGGDVLVIWKLDRMGRSLKHLVELVGSLMERKVGLLSLNDPIDTTSAQ
GRFVFNLFATLAEFERELIRERTQAGLTAARARGRVGGRPKGLSPQAEAT
ALAAETLYRERKLSVAAIAQKLHLSKSTLYSYLRHRGVEIGPYKQSAQSP
INVSVVESGNADQPKVATILLTLRIENNSKFVRGKKRSIEHVEFFDLAQY
DATRRPNGEYELKVPYDTDEELDEAVNDLLTDIACGADDRHCFSESHARM
EGTDRHW
>XCV1213 putative excinuclease ABC subunit A
MSNATSSTGLVRVRGAREHNLKNVDVDIPRDALVVFTGVSGSGKSSLAFG
TIFAEAQRRYLDSISPYARRLIDQVGVPEVDSIDGLPPAVALQQARGAPS
ARSSVGSVTTISNSLRMLYSRAGQYPPGQEIIYADGFSPNTPAGACPTCH
GLGRIYDATEATMVLDRSLSIRERAVAAWPGAWHGQNQRDILTTLGIDVD
VPWHTLPKKTRDWILFTDEQPVVPVCAGYDLVEVKRALKRKEEPSYMGTF
TSAQRYVLHTFATTQSAQMKKRVAQYLLSTQCPQCDGKRLRREALSVTFA
GLDIGELSRRPLDEVAELLRPAAEAAPSKGTRKDARQHPEQAIAARRIAA
DLRARIAVVQALGLGYLSLERSTPTLSPGELQRLRLATQIRSQLFGVVYV
MDEPSAGLHPADAQALLGALDQLKAAGNSVFVVEHEVDLIRHADWIVDVG
PAAGVQGGQVLYSGPPAGLEQVQASSTRRYLFGTPPQVHRQARAASGWLQ
LRGITRNNVRALDVDLPLGVFTTVTGVSGSGKSSLVSQALVELLAAHLGQ
AQAEDEEALDPLERGTQVPSEGAIVAGLDQVRRLVRVDQKPIGRTPRSNL
ATYTGLFDPVRKLFAATPAARRRRYDPGQFSFNVAKGRCATCEGEGSVYV
ELLFMPSVYAPCPTCHGARYNAKTLEIALRGRNIAQVLEMTVDQAAIFFA
DDASVLRPLQVLREVGLGYLRLGQPATELSGGEAQRIKLATELQRAQKRD
TVYVLDEPTTGLHPSDVDTLMAQLQGLVDAGNTVIVVEHDMRVAASSDWV
LDMGPGAGGAGGKVVVAGAPDVVARHRGSRTAPFLAQVLRGQ
>XCV0322 TatD-related DNase
MSNLTQYNHPCSFRRHRSMQLIDIGANLTHDAFDHDRDAVLQRARDAGVA
QLVITGASREHSPLALQLAQQHPGFLYATAGVHPHHAMEFTAECEAEMRT
LQAHPQVVAVGECGLDYFRDFAPRPAQHKAFERQLQLAADNGKPLFLHQR
DAHEDFIAIMRSFEGRLGAAVVHCFTGTRDELFAYLDRDYYIGITGWLCD
ERRGAHLRELVRNIPANRLMIETDAPYLLPRTLKPMPKDRRNEPMFLSHI
VQELARDRGEDVAVTAANSTAAARAFFRLPEPASATSG
>XCV0066 IS1477 transposase
MLEHTPLSERRACRLAGLSRDAFRHAPVPTPATQALSARLVELAQTHRRF
GYRRLHDLLRPEFPSVNHKKIYRLYEEAELKVRKRRKAKRPVGERQKLLA
SSMPNDTWSMDFVFDALANARRIKCLTVVDDFTRESVDIAVDHGISGAYV
VRLLDQAACFRGYPRAVRTDNGPEFTSRAFIAWTQQHGIEHILIEPGAPT
QNAYIESFNGKFRDECLNEHWFTSLAQARDVIADWRRHYNQIRPHSSCGR
IPPAQFAANYRTQQANNAVPFNPGLYQ
>XCV1847 ISxcc1 transposase
MRKSKFTDSQIVATLKQVEGGRQVKDVCRELGISDATYYVWKSKYGGMEA
ADVQRLRDLETEHNKLKRMYAELAMENHALKDVIAKKL
>XCV2261 phage-related integrase
MMALSDLTVRQAKAAEKTYSIPDTDGLGLVVAPTGGKSWHLRYYWLGKQK
RISLGNYPEVGLREARTLRDEARALMAKGINPHTDRKQKRRAIKLASDYT
FKAVFDAWVEHRAKELKEGRNSTLSQIQRIFGKDVLPSLERMSIYDIRRP
QLLGVLARIERRKAFTTAEKVRTWLSQLFRYALVIVEGMEANPATDLDVV
AEPKPPVSHNPYLRLPELPDFLQKLRLYNPRGWQTQLGIRLLFLTGVRTG
ELRLATPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPHDIPPYIVPLSV
QAIEIVRYLLGVMRPAQKHLLAHRSELKKRISENTLNAALKRVGYDAQLT
GHGIRGTISTALNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRM
MQDWADRLDLLEQGQVEAASAHLTIHIEGGVLPRYHGRL
>XCV2481 Replication protein A
MAIDVLAAFECEPPALDFIWPGFLAGTVGALVAPGATGKSFWALEAAMSI
ACSVAGGDLVGLAPAHTGRVVYLAGEDPPPALVRRIHAIGQHLGHAARQA
IAENLALEPIMGKRLNVMDEAHLRRVIEYSAGARLIVLDTLSRIHALDEN
SNGNMAHLVAVLEQVAATTGASVLYLHHVSKGSAREGLTDQQQAARGASA
LIDNARWCGYVARMTEDEAKRLSDRAHDRQPIGDERRGYFVRFGVSKQNY
DATPLDRWYMRHAGGVLVPVELYEASRNEERRDGRRRGDGF
>XCV2273 Tn5044 transposase
MTTLHETAYPRLKPDPTAKELQDVYTPTEAERRLVWRIATGPTTRLAVLL
HLKLFQRLGYFSLISEVPERVLHHVARAAGFKRLPPLNKLTAYDASGTKR
GHLAQLRTFLNVRALDADGRTWLAGVAKTAAQTKHIVPDIVNVMLEELVH
HRYELPAFSTLERIAIAAREQVHDAYYAQIATALSLAMRELIDGLLRTPP
GASHSGWQALKREPKRPTNKEVRYYLQHIQRLRTLAEQLPAIDVPVPKLK
QFRAMARALDAGELAELTPVKRYALAAIFIRSQYRKTLDDAADLFIRLLQ
NLENTAQQKLVAYQLEHSKRADVLIGQLKEILQAYQIEGTDSQRVDAIEG
VLVADIGLLLAECEEHMAYAGRNYLPFLLAPYGTLRPLLLNCLEIMGLRA
ASQDPSMERMIAAVLALRHQRRESVEIASLWLDPIRDLTWLSAAWRRHVF
PKALAAAGPGWMHRKYFELAVLAQVKDELKSGDLFIPHGERYDDYREQLV
DEATFARELDAYGEVSAIPTEATAFVQGLRAKLITLADAVDGRFPDNLHT
SMVDDRLVLKRLQRTEVTQAIAAVDALITERLTPTSIVDVLVDTTRWLEL
HVHFRPIAGTDARVDELLRRVITTLFCYGCNLGPTQTARSVKGFSRRQIS
WLNLKYVTEDTLDKATVDVINLYNKFELPGYWGSGKSASADGTKWSVYEQ
NLLSEYHIRYGGYGGIGYYHVSDKYIALFSHFIPCGVHEAIYILDGLLAN
KSDIQPDTVHGDTQAQSFPVFGLAHLLGINLMPRIRNIKDLVFSRPEPGR
TYQHIQALFGDSIDWPLIETHFLDMLRVAISIKLGKITASTILRRLGTYS
RKNKLYWSFRELGKVVRTLFLLHYIDDVEVRKTIHAATNKSEEFNGFVKW
AFFGGEGIIAENIQHEQRKIVRYNQLVANLIILHNVEQMTRVLAELRDEG
RTISPEILAGLSPYRTSHINRFGDYTLDLNREIAPIDFSRIILAETMG
>XCV2296 ISxac3 transposase
MIERCRDEFPIRLMCRCLKVSASGYYEWSKRPASARQLDNERLVVRMREL
HEDSRGTLGAGRMREDLAEEGETASLNRVARLMAADGLQGWPRRKRRGQR
GSPAVTPPGVVNLLERDFLALEPETKWVTDITEIKTQQGKLYLCIVLDLY
DQRIVGWSMHARQDRQMVIRAVQMAVWQRQGSDEVIVHSDRGSQFRSGDY
QRYLTANGLICSMSAVGHCGDNAACEGFFGLLKRERIYRTSYATLDGARA
DVFDYIERRHNPRMRRRAAKQDQKVAALLQPSVISG
>XCV2345 putative cytosine-specific DNA methylase
MANFYEFFAGGGMARAGLGPDWQCLLANDFDPKKAASYAANWGTDHLRVG
DVAALTTADLPAGADLAWASFPCQDLSLAGAGAGLKGDRSGTFWPFWQLI
KALGDEDRAPRLVVLENVCGALSSHDGKDFAAISSALSNNGYRFGAVVIN
AVHFLPQSRPRLFIIGVRKSSPIPRALVASGPEGEWHPSALVEAYGKLSK
RAQSSWEWWRLPAPPARTSIFADLVEDKPHGVTWHTAAETKKLLGMMNPL
NLAKVEAAKKAGGRQVGTIYKRTRADGPHGEKVQRAEIRFDDVAGCLRTC
RFQKTAALNVRSRLHYSSGGVGSIRQRRAAAGQ
>XCV3162 conserved hypothetical protein
MRILLQHDPGGNAPLRYVQLTLQPDLFGGWELLRETGEIGGRTQLRRDQY
LQQDEADRAFDKARDTQLKRGFQLITGGADDAPR
>XCV3409 ISxac3 transposase
MIERCRDEFPIRLMCRCLKVSASGYYEWSKRPASARQLDNERLVVRMREL
HEDSRGTLGAGRMREDLAEEGETASLNRVARLMAADGLQGWPRRKRRGQR
GSPAVTPPGVVNLLERDFLALEPETKWVTDITEIKTQQGKLYLCIVLDLY
DQRIVGWSMHARQDRQMVIRAVQMAVWQRQGSDKVIVHSDRGSQFRSGDY
QRYLTANGLICSMSAVGHCGDNAACEGFFGLLKRERIYRTSYATLDGARA
DVFDYIERRHNPRMRRRAAKQDQKVAALLQPSVISG
>XCV1119 ISxac3 transposase
MIERCRDEFPIRLMCRCLKVSASGYYEWSKRPASARQLDNERLVVRMREL
HEDSRGTLGAGRMREDLAEEGETASLNRVARLMAADGLQGWPRRKRRGQR
GSPAVTPPGVVNLLERDFLALEPETKWVTDITEIKTQQGKLYLCIVLDLY
DQRIVGWSMHARQDRQMVIRAVQMAVWQRQGSDEVIVHSDRGSQFRSGDY
QRYLTANGLICSMSAVGHCGDNAACEGFFGLLKRERIYRTSYATLDGARA
DVFDYIERRHNPRMRRRAAKQDQKVAALLQPSVISG
>XCV1177 conserved hypothetical protein
MANIDSPGHRALRRGRQSSPNSAYLLTTATWQRRAVFADFLIAATACRAF
TKATPCDARLLAWVLMPDHVHWLLQLGSDTALSDAVSRMKACSARAVNAQ
RQSRAPVWSRSYHDHALRTDDDLPAAARYIIANPRRAGLVTRAGDYPFWD
AVWL
>XCV1306 shufflon-specific recombinase
MASFRKRDEFQWQARVRRRGYPEQTKTFNTKAEAEAWARKIESEIDRGVF
VSRTEAEATSLEEVLDRYEREVVASKKGKVQEQSIIRLWKATTLAKRSMA
SIRSTDVVAQRDLWLQRCKPATVLRRLALLSHVFNIARREWGMESLSNPV
ELIRKPQPNNARTRRIALASPVQPTTADESPPDHGELERIIAASGSGVLP
AVLRLALETAMRRSEIVGLRWEHIDLAKRVAHLPDTKNGSSRDVPLSSRA
VAVLESVLPKASDMSEQDGGEDDDRVFKVSSDAITRAFVRALARARKQYL
KECEGRGIKPQKRFLADLRFHDLRHEATSRLAAIFPMHELTKITGHKDPR
MLMRYYHPRAEDLAKRLD
>XCV1113 ISxcc1 transposase
MRKSKFTDSQIVATLKQVEGGRQVKDVCRELGISDATYYVWKSKYGGMEA
ADVQRLRDLETEHNKLKRMYAELAMENHALKDVIAKKL
>XCV0221 hypothetical protein
MPTIERLILKNFKKFRDFDVSFDDKLNILAGGNEAGKSSILQAIDLALSS
SRSKVEALGVETIFSAQAISEFLGGDRNVANLPVLHIEVYFKGLGDQEFD
GRNNSLRRDGCGIRVSCLPMDEYTDEIKKALADKDGSFPFEFYEVRFRTF
ADSDLPPSSVPVITDKARG
>XCV4235 IS1477 transposase
MLEHTPLSERRACRLAGLSRDAFRHAPVPTPATQALSARLVELAQTHRRF
GYRRLHDLLRPEFPSVNHKKIYRLYEEAELKVRKRRKAKRPVGERQKLLA
SSMPNDTWSMDFVFDALANARRIKCLTVVDDFTRESVDIAVDHGISGAYV
VRLLDQAACFRGYPRAVRTDNGPEFTSRAFIAWTQQHGIEHILIEPGAPT
QNAYIESFNGKFRDECLNEHWFTSLAQARDVIADWRRHYNQIRPHSSCGR
IPPAQFAANYRTQQANNAVPFNPGLYQ
>XCVd0026 IS1479 transposase
MQLTFGDAEGLGKRKQTRREIFLAEMEQVVPWQQLLGLVAPHYPVSGRPG
RQPYALATMLRIHLLQQWYALSDPAMEEALHEIPTLRRFAQLGGLDNVPD
ETTILNFRRLLETHGLAARMLEAVNAHLARKGQSLRSGTIVDATLIAAPS
STKNADHARDPEMHQTKKGNQWYFGMKAHIGVDEFSGLVHHVHCTAANVA
DVTVTHALLHGKEDSVFGDSGYTGADNREELQTCKAAFFIAARRSVLQAI
GNKRERAREQRWEHFKASVRAKVEHPFRVIKRQFGYTKVRYRGLAKNTAQ
VLTLFALSNLWMKRKQLLPAMGSVRL
>XCV1092 putative integrase
MRLPTYLVRRSGGFSFRIIVPLRLRNTLRRKVIKHALHTTDPRLAQVKAL
YLAVRYQQAFMQIDGGGVTKSLEDLLKSAQTAFGEDQTRDYTLEVSSNGG
LRVETDGTQADADNLAAALPMLLQLNEQARTQSAPSTLAPATLPPVSAVL
GAPPGVKAITIAIAREKYIEVARKRLGKAKTFGRVVKTIDEFTAYIRPRS
FVYAIQRHQIATFLEQELTKGLQRSTVNSTQIWLAGFFKWAMASGYFEDG
RNPAHGHITITKKEKRKAAALGSEPFNIEQLKNIFDFNHFHDLGNERDRW
VALICVYTGARSNEIAKMEVADIVQEEGVWVFDFNLLGEYKSTKSEASER
KVPIHPDLIELGILERVERLKIAKEQYFFPDLTQAANNGPAGAPQRAFIR
YIARRGIKPRMGQMGLHSFRDTVITQMTRHGVSQGWRERYVGHEQSEKPS
TLDTAHSLNYSQNAYEQLSKQCHPALCWEQQGVLNIKKLKRHL
>XCVd0054 putative DNA helicase
MHFTSEQEAIIASNAKTIRANAFAGTGKSSTLIGFADARPNERQLMVAFN
KSIQLEAAGRFPRNVKCKTGHSLAWFPHGAKYDGKLLADIKPFHITGTTT
AYTRSLPVAVVRVFDQRVIETVKAFLVSADEQMGATHVSLGDSPAEKKYL
SEHALLAAAKDVWAAMQATSLPMVHDGYLKLYQLSRPRLAYDTIMIDEAQ
DTNPVLQSILQSQSARLLYVGDRHQGIYSFRGSQNAMELVKADASFYLTG
SFRFGPAVAEVANRILALKGESAQLRGLGMDTIVDQGAFENPRGTAFISR
TNAAVFDKANNAVGRGIKVAYVGGVHTYRFEIGEDISKLRQFGPADVRDP
FIASFESFESLAEYAEAVQDKELTGWAKVVERYGGKRFDQALNRIRAEAL
QFDSASPEQRDALVVVTAHRSKGLEFDHVELAENFIDTVDEDTGKLRDFS
DAERQTIEEVNLLYVAATRARKELATNCSIAQLFDPELAPDDHPSASAAI
A
>XCV2365 RadC family DNA repair protein
MSLIVNGSCVEPRFAPASQSDDRIIRQAIALLEQRIFKKGPFLDGPTAVK
DYLRLKLVAEPNEIFAVVFLNNKHEVLAYEPMFKGTIHSATVHARPIMQR
ALELNAAAVIFSHQHPSGCTEPSSADCAITQTLKTALALIDVRVLDHLIV
GQGTPYSFAESDML
>XCV3363 ISxcc1 transposase
MRYQRRPDRDDEVIALLSELAERFPERGFGKLFQIIRRRGHVWNHKRVWR
VYCLMKLNQRRRSRRRVPTRHPQPLACGDRPNAGWSIDFMSDALWDGRRF
RTFNVIDDFSREALAIEVDLNLPAARVIRTLERIAAWRGYPNKLRLDNGP
EFVALALSEWAERKGIALDFIEPGRPMQNGFIERFNGSYRRGMLDMHLFR
TLSEVREQTEHWLADYNQQIPHDSLGGLTPAEFRDQHQPQTSSFSWH
>XCVd0095 cointegrate resolution protein S fragment
MISVGQYLEAATRPNTQRAYAAATRHFEVEWGGHLPATAEQVARYLAAYA
GQLALNTLRHRLAALAQ
>XCV0223 IS1477 transposase
MKKSRFSTEQIIGFIKQADAGMAVAELCRRHGFSPASFYQWRAKYGGMEA
DEAKRLKELEVQNTRLKKLLAEAHLDIEALKVGFGVKR
>XCV3928 DNA processing chain A
MAQTAPDLRALLILLLAGGRSPPRRKLLTSYGSASEMLAAGPGAWRAAGC
DEVQAALLQGPDPQALEAGLRWCEQPGHHLIGWCDPDYPALLRHIANPPM
ALFVDGAPNVLWHPGVAVVGSRSATAGGRDHTRAFASSLACAGLSIVSGM
AAGVDAIAHEAALAQHDGITVAVVGTGVDVAYPERHQGLRDRIAERGAVV
SEYLPGTAPVAAHFPARNRIIAGLALGTLVVEAAMRSGALITARLAAEAG
REVFALPGSLHNPLARGCHHLIRQGATLAQEPAQVIEGLGQLSGELATAL
RKRLAAPTELPSKATTSAGAGPARSDPDYQRLWQALGHDPTPMDSLVQRT
GLTVAALSSMLLIMELEGDVVTEHGRYTRNP
>XCV0438 putative ISRSO12 transposase (fragment)
MKKSRFTEEQIAYALKQVELGMAVGEVCRKMGIAEATFYVWRKKYGGLGP
SELKCLRVLEEENRKLKQLVADLSLDKAMLQEVVTKKL
>XCV2321 putative transposase (fragment)
MPRRSILSAAERESLLALPDTKDELIRHYTFSESDLSIIRQRRGPANRLG
FAVQLCYLRFPGVILGVDEPPFPPLLKLVADQLKVSIESWGKYGQREQTR
REHLIGLCCKDWRQSEVGCRSAPIRRLLRNGG
>XCVd0141 DNA helicase
MGALAKIRRQARPLLAGIRSDGFRVGLSTGFHPDIVATLKERGASWSASS
RTWVLPADDNIGPLLDELGHKGGLRLAYDRSAAQAQLAAALLSPEVDAFA
PDLDVKIYPVAADGGYVVDTRYDSLVVSCLRALGGRLLSSKEGWYVQRSL
EQLLGDLAAKAGVLRGHVFIHEGEIRIDRTSGGYEAEERPTINVSGAEVK
RGQGGDEEGEEGRLAIVLQPLQRQNVDPQWFAEATASMSLLDHQPAGILH
LLAANSALLGDEPGLGKSRQSAAALHLMPGTGCRLLVAPASLLINWSREI
LAVDPNAQIAILDKEGIHAEPDWLIASYEKLGVIVQAITDGVIAPRAVVF
DEAHSIIQPTASRTLNAFLVAQKVPRRYLLTATPILNRIVELHTLLRLSG
HPLGDMERGDFAKEFAGSQEARVLLAQRVSEWMLRRPKSVLGLDAKVQEP
RYLELSGAQGVEYRRMAADPSLTALAKIGRLRQYLERQKADWLIETIAGF
EPSDKALIMCEFQDTVEYLAEEFAKAGIEVVTFLGKHSKARKQQAIDRFQ
SEPTVRCFIGTTKAAGVGHTLTAANIVCFASLPWTNALKKQAEDRAWRYG
QKRVVTVLVPLFAGTIDEQAMALIQHKAAIENDLLEDPTTAILNMDAPSN
DPEDASEISERDPEYAAILQYAKVA
>XCV2263 ISxac3 transposase (fragment)
MFMSKRRKFTAEFKRGAVEQASQPGVSCAQVARELGIRDTLLTRWKREAQ
TPGTAAFGGSGTPRDEELARLKRELARVKKERDFLREAATFFAKGSP
>XCV2477 ISxac3 transposase
MSKRRKFTAEFKRGAVEQASQPGVSCAQVARELGIRDTLLTRWKREAQTP
GTAAFGGSGTPRDEELARLKRELARVKKERDFLREAATFFAKGSP
>XCV1699 ISxac3 transposase
MIERCRDEFPIRLMCRCLKVSASGYYEWSKRPASARQLDNERLVVRMREL
HEDSRGTLGAGRMREDLAEEGETASLNRVARLMAADGLQGWPRRKRRGQR
GSPAVTPPGVVNLLERDFLALEPETKWVTDITEIKTQQGKLYLCIVLDLY
DQRIVGWSMHARQDRQMVIRAVQMAVWQRQGSDKVIVHSDRGSQFRSGDY
QRYLTANGLICSMSAVGHCGDNAACEGFFGLLKRERIYRTSYATLDGARA
DVFDYIERRHNPRMRRRAAKQDQKVAALLQPSVISG
>XCVd0036 putative DNA topoisomerase
MGAFVEDLIVIEASGKLKRLYAVLSDLGMRARCIATLGNLLQSPPQLRPV
SIQKDHVGGYQEAVRIPARPDAYDRVSAEIRSLRGRLFIATDYDQEGHAI
AADVVALTKQLRPDLAPLRLQLTELTPAALRASFASVRDYDPSLALSGTA
RRIVDRVIASAYSLPSAGVLVGRVTSAIAAMARRGLVPTHEAVLQIPCAS
GGVPFTARTTVIGESRLQELQSAASQVVSLAVSTFEMSTVGQGVNYADFL
GGMNEHMGLAEAARLLQDLYEQGVVSYPRTESRGYGARGHARCIEFAHSH
GARLGPTAATVLPEGAHEALHIVAPQVLASVDVMKPARLQSSHKAIALSW
LSRSMAESVWQVRRDLPDLNQLPDALRGLDWSRDVGALPAWHRRPKANSR
VLNHQSAILAGLQEQRIGRPSTVVGHVVRAQERALVTPDGGEGPGGTRVL
ARAPLGLQEPAAAHRIEAVCQKAAGIGLGFAVEEALSIAAGDEAQLASLL
TTIDDWTPDDDFTPSYAP
>XCV1550 IS1477 transposase
MKKSRFSTEQIIGFIKQADAGMAVAELCRRHGFSPASFYQWRAKYGGMEA
DEAKRLKELEVQNTRLKKLLAEAHLDIEALKVGFGVKR
>XCV0439 putative ISRSO12 transposase (fragment)
MSERRALRIVAMSRSAFSYKAKARDCSAIRLRMREITQTRIHYGCERVLV
VLRREGWRDNHKRVHRIYKEEGLSLRHCRPRRSRSSRRRQPIKVATAPNT
LWGMDFVSDALFDGRRFRLLPVLDHFTHECLEIFVDQSLGADDVADAVVR
LVVQRGKPEAIKVDNGSEFAGKVLDRWAYENGVELDFSRRGTPTDNAMVE
SFNGRLRQECLNAHWFLSLADARSKIEAWRRFYNEERPHSALAWNPCGIR
PRTRVPSEFNEGACRLKHETATCRPWSVGATNSCLLHRCSVAREAEASVE
PSIG
>XCVc0009 Transposase, mutator family
MSPRTHEVPDELLSSLLVNYTKPEDLIGENGLLKQLTKRLVERALDAEMT
EHLGHDKHEPVANAAGNTRNGRSRKTLKGEFGELPIEIPRDRHGSFAPQL
IPKHQTRWAGFDDKILSLYARGMTVREIQSHLEEMYGTEVSPSLISSVTD
AVVEEVKAWQARPLDPVYPIVYLDCIHVKVREGAVRVKAVYLAIGITMGG
EKEVLGLWLAQAEGAKFWLQVVTELRNRGVQDIFIACVDGLKGFPEAIEA
VFPQTTVQLCIVHMVRHSLNYVSWKRRAEVAADLKRIYACATVEEAEQAL
TEFEAKWDAQYPPISQSWRRNWSRLIPFFDYPPEIRKVIYTTNAIESVNM
SLRKLTKNRGAFPSDEALMKLFYLALRNITKKWTLPIRDWKAALNRFTIQ
FEGRLPQR
>XCV1623 putative endonuclease III
MNTPQAMVPARRGSSMRKPEIQEMFERLRELNPHPTTELEYTTPFELLIA
VLLSAQATDVGVNKATRKLYPVANTPRDILDLGEEGLKRYISTIGLFNAK
AKNVIATCRILLERYGGDVPHDRAALEALPGVGRKTANVVLNTAFGEPAM
AVDTHIFRVSNRTGLAPGKDVRAVEDKLVKVIPAEFLHDAHHWLILHGRY
VCKARKPDCPGCVIHDLCRYRDKTPPAPERQAKTKS
>XCV2386 putative helicase
MSLDLETTAAEATPVQGELLDAESSPLTLSLQDFVGEFGDELLDALNSAN
PPVYNGQPQTRRQLIVAGLKRKLFPAQAEVVHAAAELLIDRGERAAIVNG
EMGCGKTTVGIATAAVLNAEGYRRTLVLSPPHLVYKWRREIQETVAGAKV
WVLNGPDTLVKLIKLREQLGVHPTGQEFFILGRVRMRMGFHWKPVFTQRR
TRHGHVAACPDCGTVITDLDGEPVNPVALQAEEYRRKCSHCAAPLWTLIR
PRSLSGSDQSSAVLKALKRIPTIGEVTAQKLMQKFGDGFLASMLGDNIHE
FINLMDGNGELVFSDRQAHRMERAMANMEFGFGEGGYQPSEFIKRYLPQG
TFDLLIADEAHEYKNGGSAQGQAMGVLAAKARKTLLLTGTLMGGYGDDLF
HLLFRALPGRMIEDGYRPSTSGSMTSAAMAFMRDHGVLKDIYSESAGTAH
KTAKGTKVSVRTVKAPGFGPKGVLRCILPFTIFLKLKDIGGNVLPPYDEE
FREVAMDTAQAAAYRDLAGRLTAELKQALARRDTTLLGVVLNVLLAWPDC
CFRSETVVHPRTRNTLAFVPAQFNEFEVTPKERELIDICKEEKAQGRKVL
AYTVYTGTRDTTSRLKVLLEQEGFRVAVLRASVDASRREDWIAEQLDRGI
DVLITNPELVKTGLDLLDFPTIVFMQSGYNVYSLQQAARRSWRIGQKQPV
RVIYLGYAGSSQMTCLELMAKKIMVSQSTSGDVPESGLDVLNQDGDSVEV
ALARQLVAA
>XCV2723 IS1477 transposase
MLEHTPLSERRACRLAGLSRDAFRHAPVPTPATQALSARLVELAQTHRRF
GYRRLHDLLRPEFPSVNHKKIYRLYEEAELKVRKRRKAKRPVGERQKLLA
SSMPNDTWSMDFVFDALANARRIKCLTVVDDFTRESVDIAVDHGISGAYV
VRLLDQAACFRGYPRAVRTDNGPEFTSRAFIAWTQQHGIEHILIEPGAPT
QNAYIESFNGKFRDECLNEHWFTSLAQARDVIADWRRHYNQIRPHSSCGR
IPPAQFAANYRTQQANNAVPFNPGLYQ
>XCV1889 putative NUDIX hydrolase family protein
MVVATLQQQLAAYRLRWPEEAALAEQFVQLLDDATDPFVRERVEGHFTGS
AWVVSADGTRTLLTHHRKLQRWLQLGGHADGDRDLAQVALREAEEESGLV
GLRLADGELFDLDRHWIPARGDVAGHWHFDARYVVLAGAHEAFKVSEESL
ALAWRPIAELLADPELDPSLRRMAEKWLESREW
>XCV3825 uracil DNA glycosylase superfamily protein
MFSAEVEPPWSFEAWRALARAGWCAQVEPDDVAWNGGAQGGLLMGQGLLA
LPAVVPPPRVSADFMQLAASVLCHRDPQRHAVLYRLLWRVASGEKALLER
ATDVDVHRLRQWQKAVQRDTHKMKAFVRFRRLPGEEEDFVSWFEPEHWIV
DRVAPFFARRFAGMRWAILTPYRSVRWDGQALAFGEGAVRTQVPADDAQE
TLWRTYYAHIFNPARLNPTMMRQEMPQKYWKNLPEATLLPELIREAGVRV
REMAERAPEPVRRRVPAAPAPLPDVVTQSLAQLRTAARDCRRCELWQPAT
QTVFGEGPDDASVMVIGEQPGDEEDLSGRPFVGPAGRLFNMALGELGVDR
EKFYVTNAVKHFRFEQRGKRRLHRNPERTHVQACSGWLQAERAQLRPAQI
VCLGATAAQAVLGSSFRLMRERGQWQRLDDGTPVLTTVHPSWVLRQPSTD
AREEGYRGFVEDLRRLLDPPPPSSDQSR
>XCV3413 putative phage-related integrase
MGMALSNAFQALRQGKPVDLDEVLRRIREQGLRELTLTDVTLPNGTRLGK
AQIDTPEDAALFAELLREPVAEVAPSAKPSGWRTGKKASGPLLSKAIADH
LGDLGRAKLHSKTVLESRHSLRLFAGAVGQDLAVSELTADHVRAFFDVVR
WWPSNATKRAPYKGLAVMDVVALAQANQVPEPAAWTVAKHRQRLSVFLVS
LVSAGLLASNPLAGIRAIATPDADDTGEPFTDDQLKAIFDPMAFPAWAKK
YPHRWFGPMLGLYSGARVNEIAQLRVEDIDTIDGVPGFFVRQGGKGQSVK
NKNSRRFVPLAKPVIDAGFLVYIDEVRQARHAQIFPHLPNSTGLGFGRQL
SRQFSVYIKRQGITAKGQGNPPAFSGRQKWS
>XCV0355 ISxac3 transposase
MSKRRKFTAEFKRGAVEQASQPGVSCAQVARELGIRDTLLTRWKREAQTP
GTAAFGGSGTPRDEELARLKRELARVKKERDFLREAATFFAKGSP
>XCV1553 phage-related integrase
MPKPYFLRRPAGLYVRFFVPTDLQALIGSRYLVRPVRLSLGDAARLAVAR
TAVALSEAFDRMRRGASSMKDDLLSQALAALQGNEARPYTIKVGGMELSA
DGAEDHARLLEALKNLPLPSSTEVRKKAGPLFSERAAIHVREMKRVGRSA
TNIFDTEYSLGLFVALVGDKPVEDYKADDVRSFLEAIEHYPSNASKKAEF
AGLAPADILKKAKKGSYAKLGMRTKEKHRDRLAAFFNALASEDLISKAPH
KAIINRSKATTDEPSRNPFSKDELNALFEPSTFKMWASKYPHRWFGTLLG
LTTGARINEVAQLYVDDLDQVGGCWGIHIRAARADQRLKNPHSSRFVPLP
SALIEAGILIYRDEVKAAGFERLFPHLPYHSEHGYGDALGDQFRTYAKKC
GLTQRLKSFHCFRHTLSNALINEHGISVMTTQQITGHDLTLPPGLKHYVD
PPTVPARLQALEKFGPPVDLPAYQPKQFNISFKQVRHMERRRQTAKQETV
AVKNKTGWKN
>XCVd0049 DnaB-like helicase
MQDGGTKRQRGADGDVARLKIPPHSVEAEQSVLGGLMLAPETLDIVKDLL
VEEDFYRRDHRLIYRSICELDEKGQPYDAVTMGTWFEEQGQLELVGNGAY
MIELASTVPSAANIAGYAKIVRDRARLRELIEHGTEIVNDGYHPGGRETD
ELIAIAEQRIFSVAEGGRVRHTYTDVTTGLKRVVTTLQERYENDSSIIGI
PTGLPEFDEMTAGLQDTDLIIVAARPGMGKSTLAQGFADSAATRSKKAVA
IFSMEMSSDQWFLRMVAAESRVDGQRLKTGKLEDEDWAKVMSAMKKLQGL
KLFVDDSPALSPDLLRSKARRLKREQDIGLIVVDYLQLMMVPGSKENRAT
VVADISRSLKALAKELRVPVVALSQLNRSLETRADKRPLMADLRESGGIE
QDADVIVFIYRDDYYNKDSTEKGIAELIIGKQRSGPTGTVRARFSGGITK
FEPLGSGANDF
>XCV0619 transposase
MQKRQQFTAEFKREAVRLLRAGDRPAAVIARELGIPRNRLYKWATDLDAK
GASAFAGSGRPKASQDELAVLQRELARLREENEILKKAAAYFARALP
>XCV2205 Nudix hydrolase family protein
MPYTPIVATLGYLLSPDGTQVLMIHRNARPGDQHLGKYNGLGGKMEPDED
VLACMRREIREEAGVDCGQMQLRGTISWPGFGKQGEDWLGFVFLIHSFDG
TPHTSNPEGTLEWIAIERMDQVPMWEGDRHFLPLVFDGDPRPFHGVMPYR
DGRMQSWTYSRI
>XCV1356 ISxcc1 transposase
MRKSKFTDSQIVATLKQVEGGRQVKDVCRELGISDATYYVWKSKYGGMEA
ADVQRLRDLETEHNKLKRMYAELAMENHALKDVIAKKL
>XCVd0047 putative antirestriction protein
MGLLRTLRGSLAVPTPQAAAPAASSHVSGLSPASRPVYDRAAEGTGIFVK
HIEDGGCPWQQPQSKPLEWPRNELRGTPYHGFNAIALAMSGYDDPRWCTF
DQAAAKGWRVRAGEKATSIFMWKVQEKETGTYDDDGEPITRKFPLLCRFK
IFNFAQISGPEPHQPHQLTDTEARKLAEPIVETVGMTVTESATGPTGYNP
ERDSLVVRPRVAYPSEKHYCADLMNGVLAVAAREAVIGLALPAEAEMTDH
QRAQRDLRVEIARSMLAMRTGLPLSPPAAVKDAAILTLLQSDRREVFRAA
KDAENIMRYALAFNPEVLPTLEDEHREQMSAAVAEGAPEMVFDPSEFQFW
PAELQQDRPRP
>XCV3101 replication related protein
MSVPQLPLALRAPPDQRFDSYIAAPDGLLAQLQALAAGHVSDWLYLSGPA
GTGKTHLALSLCAAAEQAGRTPAYLPLQAAAGRLRDALEALEGRGLVALD
GVESIAGRRDDEVALFDFHNRARAAGITLLYTARQMPDGLALVLPDLRSR
LSQCIRIGLPVLDDAARGAVLRDRAQRRGLALDEAAIDWLLTHSERELAG
LVALLDRLDRESLAAKRRITVPFLRRVVAGMPGPE
>XCV3781 conserved hypothetical protein
MQSEKDIHADAIAVTKKHLSQGLPAHVRSDCRVLLLGSMPGVASLEAARY
YAHPRNRFWPLMHALLGIDAAASYALRLQALLDHRVGLWDVIGQCERRGS
LDTSIVAASIVVNPLPALLATLPQLRMVACNGAAAAQAWRRHVQPRLSAQ
LCALPVVALPSTSPANAAWSLPRLAAAWQPLCDALR
>XCV1294 IS1479 transposase
MQLTFGDAEGLGKRKQTRREIFLAEMEQVVPWQQLLGLVAPHYPVSGRPG
RQPYALATMLRIHLLQQWYALSDPAMEEALHEIPTLRRFAQLGGLDNVPD
ETTILNFRRLLETHGLAARMLEAVNAHLARKGQSLRSGTIVDATLIAAPS
STKNADHARDPEMHQTKKGNQWYFGMKAHIGVDEFSGLVHHVHCTAANVA
DVTVTHALLHGKEDSVFGDSGYTGADNREELQTCKAAFFIAARRSVLQAI
GNKRERAREQRWEHFKASVRAKVEHPFRVIKRQFGYTKVRYRGLAKNTAQ
VLTLFALSNLWMKRKQLLPAMGSVRL
>XCVd0058 conserved hypothetical protein
MAESSRITSTEVFDAIEKLLAAGQPPTHMSVREMLGGRGSGPVLSKFIAR
WFEEHGAEFFIKVGDARSRKPITDIGSQIRHAAEQAAQVLSEAERQRQEA
LCARETAAEQRSVMLDAREEALFAAQAKLAERESEQERLIHELQSDKTNL
VSRLDQARLDRLQVESELRELSSAIAGVRDELALALQEIAVSQEREQASQ
LALAEARRERDAASKRFERFEDAYAKILNAIHLLRESGQEQGTNLLEALQ
KLSERLELHQTQLDASAAELAAASRRARTLEGKLSQSEMKLAAAHGEART
LSAALVERMHMIDQLRAERDAAIALATSVSSSLATISKQVERDGHHG
>XCV2349 putative transposase (fragment)
MVPLLPKPQAHHALKRAISFHRRGEIRDRSAEGQHYRIAGMNLLAAIIIF
WNTMKLGEVVANQKRDGKLLSPDLLAHVSPLGWEHINLTGEYRWPKP
>XCV0706 ISxac3 transposase
MSKRRKFTAEFKRGAVEQASQPGVSCAQVARELGIRDTLLTRWKREAQTP
GTAAFGGSGTPRDEELARLKRELARVKKERDFLREAATFFAKGSP
>XCV0662 putative DNA-formamidopyrimidine glycosylase
MHARASGCRVHRDHGRITQRFDTGRMPEGPSLVILREDTQAFVGRKIVRV
SGNSKQDIARLDQQKVLALRSWGKHFLIEFAHFSVRIHFLLFGSYRINED
KPNAVPRLGLEFSNGQRLNFYACSVQFIERPLDEVYDWTADVMNPLWDPA
QARRKLRAAPALLAADALLDQTIFAGVGNIIKNEVLHRIRVHPESTVGAL
PARKLGELVTQARDYSFDFYTWKKAFVLKKHYQVHTKTSCPRDGAPLQYR
KHLGKAGRRAFFCEVCQRLYRADEA
>XCV2208 putative poly(hydroxyalcanoate) granule associated protein
MMASSGSDNGNFDDKARQYWAAWGDAMRHGQAGAAAQQPPPASGSDAPQD
WRKAVDWWSQLLPTQAAPQAQEAIDRFRTQAGDWFGTMQQVAAQFAGRDT
SANEVAEAWRQAVQGQGEQLMQWTLGSLRGGSPGGFDPWLQDAVQALQKW
REENAPWLDMPAFGLNRNHQSRLQKLARAQQEFQAQSEAYGEQLKAAIEQ
AFARFASKLSEHESSGSQLTSARALFDLWIEAAEESYADVALSEQFRKVY
GGFANAHMRLRAALQEEVEQLSERFGMPTRSEMDAAHRRIAELERLVRRM
LRNVASPASKPAAAPQPEPVPPVAGKRASSARASAAARPAGAARAVKPDA
SRKASVDRTATKKAAPKQAPAVSKSTKTTSVKKRGGAKSPPKPADRKPAA
GKKRGAQA
>XCV1379 putative DNA repair protein
MLIEHERGFVLHVRAWRETSLLVEVLTEQHGRVGLLARGVQGPRKQALRA
ALQPLQLIQFSAVQRGELAQLRQAEALDTAPRLVGDTMLAGFYISELLLR
LAPRNDPVPELYACYAQARTYLASDLPLAWGLRRFERDVLDGLGFAFDLQ
HDSDGQPIDPAARYRLDPQEGALRVLSERLAQDRRETVTGAALLALGEDV
MPDADDMPGLRRSMRGVLLHHLGGRGLKSWQMLEDLARRR
>XCV1912 putative single-stranded-DNA-specific exonuclease
MTSPPRIVRRPSGQAGSWPDTMLPLLRRIYAARGVTDAQGAQPRLGQLLS
PELLHNSGVAAELLADAIAQQRRILVVGDFDCDGATACAVGVRGLRMLGA
LDVHHAVPNRMVHGYGLSPALVDELAALQPDVLVTVDHGIACHAGVAAAK
ARGWTVLVTDHHLPGEMLPPADAIVDPNLAEDTFPSKTLAGVGVIFYVLL
ALRSVLRKRGAFAGRAEPDLSVLLDLVAVGTVADLVPLDTNNRALVSAGL
RRLREGKGCIGLRALIDASGRDVARLSASDIGFALGPRLNAAGRLEDMAL
GIELLLSEDWSQAREIAGTLEEINAERRAVQQLMTDDAEHAVTKVVLDGD
GALPIAACLFDAEWHPGVIGLVASKLKDRLHRPVIALAPAEPGSSQLRGS
ARSIPGLHIRDVLAAVDARHPGLIQKFGGHAMAAGLSIDHAALATFEQAF
LAQVTAMVDASLLHAQLHSDGELAAHELDHLHAEALRVAGPWGQGFPEPL
FDGQFEVLQHRVLKDRHLKLTLRCPGRAEPLNAIHFNGWRGSDPARLVRL
AYRLVADDYRGGTAVQLIVEHCEPVTVTG
>XCV2297 ISxac2 transposase
MIDDFNRQGLGIEFDLSLPSARVIRSLEQIIEWRGKPLVIRCDSGPQYIS
GALLTWAEQHDIRIEHIQPGKLQQNAYVERYNRTVRYGWLARTMFDSIEQ
VQDRATRWLWTYNHERPNIALGGITAMQKLALAA
>XCVd0115 Tn5044 transposase
MASIERTAYPQFKRNPVVRELVAAYTPTDAEVAFVAEYTRQPAHRLTLTI
LLKTFQRLGYFPVLDEVPPAVMRHIRSALKLRVQVKPANLANASRYRYYR
RIRQFLQVRAYSDGGLKIAARAVYEAAAVMDNPADLINVAIEQLVRDRVE
LPAFSTLDRLTRRIRTLVNGRYFAQIEARLTIDEKQRLEGLLQVEQGRQK
SPLHAIKRLPKRSSLQHFQELIDHIAELDELVGSELHLAGIPEVKLKHFA
AEARALDASELRKFRPARRYAVLVCLIHRARVQTRDDLAEMFIKRMGNIH
NRGREELERLRARYREKTETIVATMSDVVRVLDHHRGDTEAGREIRRLVN
AHGGVQTLQADCNAIAAHSGDNHLPLLWPFYKSHRSTILRMVRRLDLAST
TEDRSLIDAIELILTQERTRSDWLDEAVDLAFTTQLWRKTIVHRTERGEE
RIHRRLFEVCVFSSLANELKSGDVAVRGSETYADYREQLLPWEQCEPLLE
DYCKHVVLPATAVGFVNALQSRLTQVAELTDQGYLENGQVVIGEDGIPVL
KRSKAKEMSCGARALETAVLDRMPERSVIEILCDVAHWTRWPRHFGPLSG
SDAKIEQPTERYVLTAFTYGCNLGPAQAARHLRGAVSAHMLSFVNRRHVD
ANKLAAACRDIINSYAGLQLPKCWGDGKSAAADGTKYDLYDQNLLASYHI
RYGGYGGIAYHHVSDTYVALFSHFIPCGVWEAVYIIDGLLKNTSDIQPDT
VHADTQGQSLPVFGLSHLLGIQLMPRIRNWREYKFFRPDEDIRYEHIDAL
FRDTVDWDLIETHWKDLMQVVLSIKTGKIAASTLMRKLGNYSRKNRLYQA
FKALGSALRTLFLLQYISNRELREQITASTNKVEAYNGFAKYFFFGGEGV
IADNDPVEQEKAVKYNDLVSNAVIFYNVVEQTRIMKSLMRQGWKITREDV
AFLSPYVTSHVKRFGDYLIDVEAVPEPYETELALVV
>XCV1849 putative transposase
MRERFGVSERRALRIVAMSRSAFSYKAKARDCSAIRLRMREITQTRIHYG
CERVLVVLRREGWRDNHKRVHRIYKEEGLSLRHCRPRRSRSSRRRQPIKV
ATAPNTLWGMDFVSDALFDGRRFRLLPVLDHFTHECLEIVVDQSLGADDV
ADAVVRLVVQRGKPEAIKVDNGSEFAGKVLDRWAYENGVELDFSRCGTPT
DNAMVESFNGRLRQECLNAHWFLSLADARSKIEAWRRFYNEERPHSALAW
KTPAELPENTGPKGIPCRRKRSNLYRLMALLSGVGQVMGRLALCCRLFNG
A
>XCV1844 ISxac3 transposase
MIERCRDEFPIRLMCRCLKVSASGYYEWSKRPASARQLDNERLVVRMREL
HEDSRGTLGAGRMREDLAEEGETASLNRVARLMAADGLQGWPRRKRRGQR
GSPAVTPPGVVNLLERDFLALEPETKWVTDITEIKTQQGKLYLCIVLDLY
DQRIVGWSMHARQDRQMVIRAVQMAVWQRQGSDKVIVHSDRGSQFRSGDY
QRYLTANGLICSMSAVGHCGDNAACEGFFGLLKRERIYRTSYATLDGARA
DVFDYIERRHNPRMRRRAAKQDQKVAALLQPSVISG
>XCV0816 conserved hypothetical protein
MPAARQQRGAAVEAAARALLEQAGLRLVVGNANYRGGELDLVMRDGPALV
FVEVRYRRDDRFGGGAASVDWRKRRKLVLAAQLFLGAHPTLAALPCRFDV
VDASGEPPVLHWIRDAFRADDC
>XCV3359 IS1477 transposase
MKKSRFSTEQIIGFIKQADAGMAVAELCRRHGFSPASFYQWRAKYGGMEA
DEAKRLKELEVQNTRLKKLLAEAHLDIEALKVGFGVKR
>XCV3905 ImpB/MucB/SamB family protein (N-terminal fragment)
MFALIDGSNFYASCELVFQPDLRDRPLVVLSNNDGCAIARSDEAKALGVT
MGQPIHKVPSQIRRRLTLRSANFGLYGDIASRIGVPWPSRAACGGVLH
>XCV1848 putative integrase/recombinase
MSKAKTAAKPGRTKTFSGTLPRGIKVFQAVSPVAGVTLRTDGQLRWEARI
RRSLNGQALKFPLVRYPIDPKASPNTEHHIDAARLMAEAYVRREHASLEL
RQTPYAHTSEAWTFGDLLRRFVQEIDDGLIKHASVRTDHSNAYLFLGGGK
GLGLSQTGMPHLTRKLAKDLTQDDFLGRHASSFVNSYVKVKRDGTTLPMA
QGSKKRALTTIRNLFRIAHENWQIDLRSPIKSLKSLNSDDARDRTLTEEE
WNAIVAQLDAGRTDQATADVIRFARMTAARRSECVKLDWADINFKKKTAR
LRETKAKNGKYNERVIPLTSEPMALIATRFEASETKKGAVFVTSRGKRIR
ADTVTQAWDRVREQVAEKLGDPEILTARMHDLRHTRITEMGHHLNPAEAA
RISGHKDLKTFMRYFNPDPVALGKKLEQLERQGGAGTAVDEVVKQLLRLS
PEDMASAVALAFQAQAKASSRAPTACAAGPTQLPA
>XCV2324 conserved hypothetical protein
MLPGYASRRMAPPSCASHPFRKRAMPTLDAFLTDVRACTRCAPHLPHGVQ
PVFQFHPSAPILIAGQAPGARVHASGVPFDDASGARLRAWLGVDRDTFYD
PTRIAILPMGFCYPGTGKSGDLPLRPECAPRLARSLHAAFRAPVAGHRAG
QLRHGLPPRYWQDAAHPGGRSLARALAASVPPASP
>XCV2615 integrase
MPLTDTAIRKAKPTATPQKLRDGNGLYLLLRPDGARWWRYDYRRPVTGKR
NTLSFGTYPEVSLSDARERLAEARRLLAAKIDPGEQRKAVKAAGEAAAAN
SFEVIAREWFAKQQKDWSTQYADKIIRRLQSDIFPWIGSSPIAAITAPEL
LKHLERIEQRGAIETAHRALQTCGAVFRYAVRTGRAEADPTGALKGALTP
WRSMPFAAATTSEEATTLLRKIDISTSRPVVRSALRLAPLLFSRPGELVR
MRWTELDLDAGQWRYFVTKTKRTHIAALSTQAVEILRDLHPLTGRGEFVF
PGGRDPRKHMSGNAILVAARRCGIEKEESTIHGFRHMASTLLNEMGDWNP
DAIEAALTHKMPGVRGIYNQAQYLDERRKMMQAWGDYLDELKSMRQKPVI
HEAA
>XCV0737 conserved hypothetical protein
MDEFDQRSWWTPAPDDAAWALPDDLRAADPLSGRDCGWVNQMRPFVRHFS
RPGEQVFDPFCGFGSTLLAAALEGRNAHGMEIDPARAQLARMRLARHAVA
APVVVGSLADTAPAGPIDLCLTNVPYFGCHWHGDVLPGQLYASSDYASYL
TGMRAVFHALRKQMRPDGVGVAMVQNVVVGGRVIPQAWDLGRILASLFTL
REERVLCYRRPAAALAHAKTQSDRSHEYALIFQHCRARLDLQQAAQLLQA
VQAQGLPIVVHGSYARWLASPTSVPEGPADLDLMLRGEQALWDRLTLWLQ
QQGFALSLWGEPCRAPVAVAVVRAHHYLRAERIGADGRRLQVDLQLPVDE
PLLP
>XCV3372 Nuclease-related protein precursor
MALRQDTRSAVCRLERKWLLKLLKCWVLSVLVLIALPVSAAELVGRATVT
DGDTITVAHQRIRLWGIDAPESAQQCNAHDGSAWPCGRRAAAALDGYLLD
KTVHCQPKDTDRYGRTVAECFVQGQSVNAWMVRSGWAVAYRQYATAFEVD
ERLAQQQRRNLWQGAFQMPADYRRDKKARTATTRQVAASAPSNCRIKGNI
SSDGKKIFHMPGQRDYAKTRISPAKGERFFCSVNEAAAAGWRPARR
>XCV0224 conserved hypothetical protein
MYVAQSTPSERNKHAYQYRKAKRVFRDTSLKAMNDTVVDYKFDVRSSSKS
SIESDLVITEDDIPIEGKGKGRQCFIKTEFALRNRESALDLLLLEEPENH
LSHVHMHKLIQRIDASKDKQLFIATHSSFIATRLNLRKVLLLNEVGAAKP
ASLQNLTDDTARFFMKAPDNNVLELSLCNRAILVEGDAEFILLGALYEAC
SGGSSTEKDGIHVISVDGTSFKRYMELAKVLGIKVAIVRDNDTDYQLNCV
DNYKDFVSDKIRVFADPDPARSTFEICIYQDNTKSCDDMFAAGRRTLSVQ
DYMLDNKTEVAFRLLEKHGKALTVPPYIEQAIAWIRG
>XCV2866 ISxac3 transposase
MIERCRDEFPIRLMCRCLKVSASGYYEWSKRPASARQLDNERLVVRMREL
HEDSRGTLGAGRMREDLAEEGETASLNRVARLMAADGLQGWPRRKRRGQR
GSPAVTPPGVVNLLERDFLALEPETKWVTDITEIKTQQGKLYLCIVLDLY
DQRIVGWSMHARQDRQMVIRAVQMAVWQRQGSDKVIVHSDRGSQFRSGDY
QRYLTANGLICSMSAVGHCGDNAACEGFFGLLKRERIYRTSYATLDGARA
DVFDYIERRHNPRMRRRAAKQDQKVAALLQPSVISG
>XCV2710 putative methyltransferase
MSRPQRPASCGAEGQVRIVGGRWRNTRLAVPSLPGLRPSSDRVRETLFNW
LMPRLPGARVLDLFAGSGALGLEAVSRGAAHATLIERDPGLVQRLREHVT
RLDAATQVQVLQEDAVRWLERAPAALADIVFVDPPFAAGLWPAVLEHLPA
HVAADAWLYLEAPADAPPLLPAGWHLHREGATREVRYALYRRAAATLKSD
PTPVVSV
>XCV3386 IS1477 transposase
MKKSRFSTEQIIGFIKQADAGMAVAELCRRHGFSPASFYQWRAKYGGMEA
DEAKRLKELEVQNTRLKKLLAEAHLDIEALKVGFGVKR
>XCVd0071 phage integrase family protein
MKDNSTSSALAQTVQHLVLPEQLAQQAADAVRELLAEAAAANTTRSYASA
LRYWAGWHAARYGIELALPVPEATVLQFVIDHVQRRSTDGELAWELPPMV
DQALVAAGLKAKLGPWTLATVRHRVAVLSTAHRLKQVANPCEQPAIRTVL
SRAARAAVKRGERPRKKTAITLPELEAMLATCDDSLEGIRDRALLCFGFA
SGGRRRSEIAAADLRDLRRIGEAGYIYRLEHSKTQQAGVTVSSTPDKPVL
DRAALALEVWLEASGITEGAIFRRLWKQRVGPALSPAAVGEIVQRRARLA
ALEGDFGGHSLRSGFVTEASRQGVALPAIMQLTEHRAVASVIGYFQTGGA
AANPAARLLED
>XCV0556 putative transcriptional regulator, Fis family
MNAAPSRPDTSRGAPKSPLREHVAQSVRRYLRDLDGSDADDVYEIVLREM
EIPLFVEVLNHCEGNQSRAAAMLGIHRATLRKKLKEYGLT
>XCV1551 IS1477 transposase
MLEHTPLSERRACRLAGLSRDAFRHAPVPTPATQALSARLVELAQTHRRF
GYRRLHDLLRPEFPSVNHKKIYRLYEEAELKVRKRRKAKRPVGERQKLLA
SSMPNDTWSMDFVFDALANARRIKCLTVVDDFTRESVDIAVDHGISGAYV
VRLLDQAACFRGYPRAVRTDNGPEFTSRAFIAWTQQHGIEHILIEPGAPT
QNAYIESFNGKFRDECLNEHWFTSLAQARDVIADWRRHYNQIRPHSSCGR
IPPAQFAANYRTQQANNAVPFNPGLYQ
>XCVc0012 ISxac2 transposase
MVRPSQRREMAQSAVTSGRTNIRHACQTFAVSQTCFRYQAKASEQNARIA
DWLIRLTTAHRDWGFGLCYLYLRNVKGFGWNHKRIYRIYRELELNLRIKP
KKRLVRERPQPLAVPETINQVWSMDFMQDQLADGRSFRLFNVLDDFNREG
LGIEVDLSLPSARVIRSLEQIIEWRGKPAVIRCDNGPEYISGALLSWAQR
HGIRVEHIQPGKPQQNAYVERYNRTIRYAWLAQTLFDTIDQVQDKATRWL
WTYNHERPNMALGGITPAMKLAMAA
>XCV3387 IS1477 transposase
MLEHTPLSERRACRLAGLSRDAFRHAPVPTPATQALSARLVELAQTHRRF
GYRRLHDLLRPEFPSVNHKKIYRLYEEAELKVRKRRKAKRPVGERQKLLA
SSMPNDTWSMDFVFDALANARRIKCLTVVDDFTRESVDIAVDHGISGAYV
VRLLDQAACFRGYPRAVRTDNGPEFTSRAFIAWTQQHGIEHILIEPGAPT
QNAYIESFNGKFRDECLNEHWFTSLAQARDVIADWRRHYNQIRPHSSCGR
IPPAQFAANYRTQQANNAVPFNPGLYQ
>XCV0065 IS1477 transposase
MKKSRFSTEQIIGFIKQADAGMAVAELCRRHGFSPASFYQWRAKYGGMEA
DEAKRLKELEVQNTRLKKLLAEAHLDIEALKVGFGVKR
>XCV0225 hypothetical protein
MDKRVTLAVAGSGKTSMLVSKLDLDRRFLIVTYTDANIENIRQKIIQKFG
HIPRNVQVSTYFSFLYGFCYRPFLAMEKRSQGVTFKIPPQRPVFKLHDDR
RYMTPKRWLYSNRLADFIDRSGVLPLVRKRLEKYYDAFFVDEVQDFGGHD
FSFLLEAAKADIEMCFVGDFYQHTYDTSRDGQKNSTLHDDYARYKARFVA
AGLRVDTDSLKVSRRCSVSVCQFISNQLGVSIVAHEDRETAVRFESDPDA
VLALYSDPSVVKLFYQEHYKYGYFSENWGASKGADHYGDVCVVLSAPNVK
AFHASTLSQLKPGPRNKLYVACSRARGSLTFIPESLLKQFKQK
>XCVd0079 UvrD/Rep-family ATP-dependent DNA helicase
MTPFRRARLAAQQLRRQHCPEAAADGLRSFDLIARIAAAEAEDFDISSTR
PDDTALCGADAVLVRAFRQILVRDDVEPPDRAFLVAHEFGHWILHPEEQE
GCRQVIVSTLNPAEDDTLGAKRVEAYGARERAELQANVFARELLLPRPLA
RALFLAGHTASWIAADLALPLELVRQQLLDALLLPEDGLADDAPEPALTP
TDEQRDAARSPVRTSLVVAGPGTGKTATLLMRIEHLLANGAKPAELLVLT
FSNRAARELVDRLAANGVPDAHEMWVGTFHAFGLEFLRKNHERFGLRPGF
GVADKMAQIALLEPHIYGLPLRVFNPLGDPLPWLDQAVKTMQRAKDELLD
AVAFTRVVEAGAVQADAERLALDRDLALLYRTYEALLRANGGLVDFGDLI
LLPAQALRANRAEFAPSIGRFRHVLVDEYQDVNRASAELVKAIAAQADSL
WVVGDPRQAIYRFRGASMRNIVRFADDFPQHREFRLNENWRSFEEIVRVV
EHTGRDDNPLQGVLPLGGVAPIRGPGGVRPTLVSCEDESIAFGELASRVL
GLQAEGTAFREQVILANRHDTCDAAAAALVAAGIPVLHLGDVFQRPEVKD
LLALLQLFVDRSGSALVRIAQLPGLALPAPDVDVLLDHLRHTRPAPLSWL
QAPPADLSPAGAQALQRWRDTFGGLTSRDSPWDVICSLLFQRTRWLADYA
NGSDMQAVTRRLALWQIIYYLRVPDGGRVYQTVGTFLTRLRRRLRLADDR
DLRIPPPEAELLDAVAVMTIHQSKGLEFEAVHLMDVDARHFERSDDAPWL
PEVLTQSAGGVDEARSEAANRLYVALSRARSSLTLYEEKGYFKAARAPAV
QRAAHLLNCVVGTVAYAVGRHAAALTALAPQVPVDLREFVTYRTCPRRYY
YDVMKQLSPAAGLHPAARIEAAVMRELFVPAGGDVSAPVNDVAVELAMLT
EEYEPARPHLLAYAVQLLDAGRAWSGTVRAAMASPIDVVCDGLPVRVTAH
RVTRQDNVVTLHFVRAQPSSAYAKQHKILRWVLKCLNQQFRQYRFQGSMY
VLSSRVSEHVRPYQDLGFDHLVEMGHELMEGRFPAKPNAWVCSGCRHFLY
CPA
>XCV0039 putative DNA topoisomerase I
MACAQGVVVALTQPSLAAANNRGQSLDLCAMKAKRVVRNAAVAVSTAGKL
AAVATGAAVATAAVASAAAVAQAKATARAAGLTYVNDQQPGISRRKAGKS
FSYRDADGQRIADADTLQRIRSLAIPPAYTDVWICAKPNGHLQATGRDAR
RRKQYRYHADWAQVRGEGKFERVIAFGTALPKLRRRLRRDLVLPGFPREK
VLAIVVALLADTLVRVGNAEYARSNRSYGLTTLRNRHMEFLKGGRARLKF
RGKSGQDHDIEVDDKQLVELIRQCQQLPGQSLFQYRDDDGQLQPVDSGEV
NDYLREAMGEDFTAKDFRTWGGTLAALQRLARLPLPERSSERALKQVQND
VIREVADALGNTPSVCRKAYIDPCVFEGWRAGQLQAMATGVRGERQWEAA
TLKFLSASRSRLKTQSTSAARRKSA
>XCV2439 Tn5044 transposase
MTTLHETAYPRLKPDPTAKELQDIYTPTAAELQCVRNIATGPATRLALLL
HLKLFQRLGYFTTLIEVPERIVQHVAQTLGMRRVPADRLAGYDASGAKRG
HLAQLRAFLNVCPLDAAGRDWLGTVAETAARTKHIVPDIVNVMLEELVHH
RFELPAFSTLERIAIAARERVHDAHYRQIADALSPTMRTLIDNLLLTPPG
SHHSDWHTLKREPKRPTNKEVRHYLRHIQRLRILAEQLPPIDVSVPKLKQ
FRAMARALDAAELAELVPIKRYALAAIFIRSQYRKTLDDAADLFIRLIQN
LENTAQQKLIAYQLEHSKRADALIGQLREILQAYQVEGTDTERVGAIAGV
LVADIALLTAECDEHMAYAGRNYLPFLLAPYGTLRPLLFNCLEIMGLRAA
SQDPSMERMIGAVLALRSQRRETIDAASLGVATTDLTWLSSAWRKHVMPK
ALAAASPGWIHRKYFELAVLAQIKDELKSGDLYIPHGERYDDYREQLVDE
ATLAQELDAYGEVSGVATDAADFVQGLRTELTTLADAVDARFSDNLHASM
LDGRLVLKRLQGAQVTQAIATVDSAITDRLPPTSIVDVLVDTTRWLDLHV
HFRPIAGTDARVDDLLRRVITTLFCYGCNLGPTQTARSVKGFSRRQISWL
NLKYVTDETLDKAIVQVINMYNKFELPGYWGSGKSASADGTKWNVYQQNL
LSEYHIRYGGYGGIGYYHVSDKYIALFSHFIPCGIHEAVYILDGMLANRS
DIQPDTVHGDTQAQSFPVFGLAHLLGINLMPRIRNIKDLVFSRPEPGRTY
ENIQALFGDSIDWTLIETHVHDMLRVAISIKLGKITASTILRRLGTYSRK
NKLYWAFRELGKAVRTLFLLRYIDDVEVRKTIHAATNKSEEFNGFVKWAF
FGGEGIIAENIQHEQRKIVRYNQLVANLIILHNVEQMTRVLAELRDEGRT
ISPEILAGLSPYRTSHINRFGDYTLDLKRQVEPIDFSRRILAATTR
>XCV1969 IS1477 transposase
MLEHTPLSERRACRLAGLSRDAFRHAPVPTPATQALSARLVELAQTHRRF
GYRRLHDLLRPEFPSVNHKKIYRLYEEAELKVRKRRKAKRPVGERQKLLA
SSMPNDTWSMDFVFDALANARRIKCLTVVDDFTRESVDIAVDHGISGAYV
VRLLDQAACFRGYPRAVRTDNGPEFTSRAFIAWTQQHGIEHILIEPGAPT
QNAYIESFNGKFRDECLNEHWFTSLAQARDVIADWRRHYNQIRPHSSCGR
IPPAQFAANYRTQQANNAVPFNPGLYQ
>XCV3049 single-stranded DNA binding protein
MARGINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDRDGNNQER
TEWHRVVFFGKLGEIAGEYLRKGSQVYVEGELRYDKYTGQDGVEKYSTDI
VANEMQMLGGRGEGGGGGMGGDRPQRSAPRQQGGGGGQGGGYGGGGGGQD
YAPRRQQPAQQQSAPPMDDFADDDIPF
>XCV1283 excinuclease ABC subunit A
MAMDFIRIRGARTHNLKNIDLDLPRDKLIVITGLSGSGKSSLAFDTIYAE
GQRRYVESLSAYARQFLSVMEKPDLDHIEGLSPAISIEQKSTSHNPRSTV
GTITEIYDYLRLLYARVGQPRCPDHGFPLEAQTVSQMVDHMLTQDQEQRY
MLLAPVIRDRKGEHAQVFEQLRAQGFVRVRVDGELYEIDAVPPLALRQKH
TIEAVIDRFRPREDIKQRLAESFETALKLGEGMVAVQSLDDPAAAPHLFS
SKYSCPVCDYSLPELEPRLFSFNAPVGACPSCDGLGVAEFFDPDRVVVHP
ELSLSAGAVRGWDRRNAYYFQLIASLAKHYKFDVDAVWNTLPAKVRQAVL
FGSGDEVISFTYFTDAGGRTTRKHRFEGILPNLERRYRETESPAVREELT
KYVSQQPCPACNGTRLNRAARNVFVADRPLPELVVLPVNEALNFFRGLSL
PGWRGEIAAKIVKEIAERLGFLVDVGLDYLTLERKADTLSGGEAQRIRLA
SQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLTRLRDLGNTVIVVEHDE
DAIRLADHVLDIGPGAGVHGGEICAQGTLDDILKSPRSLTGQYLSGKRRI
EIPKQRHKPNPKMMLHLRGATGNNLKNVDLDIPAGLLTCITGVSGSGKST
LINDTLFTLAANEINGASHTVAPHREVENLDLFDKVVDIDQSPIGRTPRS
NPATYTGMFTPLRELFAQVPEARARGYSPGRFSFNVRGGRCEACQGDGMI
KVEMHFLPDVYVPCDVCHGKRYNRETLEIRYKGFNISDVLQMTVEDALRL
FEPVPSIARKLETLVDVGLSYIKLGQSATTLSGGEAQRVKLSKELSRRDT
GRTLYILDEPTTGLHFHDIEALLGVLHKLRDEGNTVVVIEHNLDVIKTAD
WIVDLGPEGGHRGGTILISGTPEDVAAHKPSYTGQFLAKMLPSVKARETR
PAAMANKPDARPPRKVKPEKVAKAAKSATKKTAKKAS
>XCV2298 phage-related integrase
MALSDLIVRQAKTTGKRYTLHDNDCLSLMVSAAGGKSWIFRYSWLGTQKR
MSLGSYPALSLREARAERDKAQALIARGIDPRIERDQRRHAARLAGEYTF
KNVFDAWVEHRRKELKEGRQSTLSQILRIFNKDVLPTLGKMSIYDIRRPQ
LVGVVAAIEKRKAFTTAEKVRTWFNQMFRYALVIAEGLEVNPAADLDVVA
EPKPPVAHNPYLHLPELPEFLQKLRRYNPRGWQTQLGVRLLFLTGVRTGE
LRLAEPEQFDLDRGLWIIPPQVVKQLQDEMRKAGKRPQDVPPYIVPLSLQ
AIEIVRYLLGVMRPAQKYLLSHRSELKKRISENTLNKAVQLMGYEGRLTG
HGIRGTISTALNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRMM
QDWADRLDLLEQGEVEAASAHLTIRIDGVPVMAEAEDVVSAAPTVAEPVA
SGVSPVVATPIVVTPNSGGITFQRLSQVPPPPTHAPEPEVSAIQREREEM
LAMYESPNNLPVPLFGKLAGKSKDQINRELKAGKLLSISLGNRGQRVPDW
QLVPLKHKLAQVLMNQCPRADSWELYRMLTQPHPDLGDRAAIDAVTPTNV
PTIIRVIMGDYQRHADAPEAVAIWPTPGDVRQSVRRLVDSAVVFEGA
>XCV3910 putative phage-related integrase (fragment)
MVQRLVEVFAMGRPANRYQPALPATPSKANHLHRYLRRALAWRVRVGLCR
SNPAIGVRQAREAKKHRMPTPAAFDKVLTFARERASLMPHAKGSCPSYLA
PVMVLAYSARLRGIEVCTLNDTHKQPTGIHAQRRKGSRDTLIEWDPEMIE
AWDLLVERRTAIWTKNGRNFAVPIKAEDRRLLVEQTGNPMAKSSLDSAWQ
RFIKLAMREGIISNQERFSLHGLKHRGITNTVGNRGDKQDAAGHVTPEMT
GRYDHALPVVKPPRRS
>XCV1224 conserved hypothetical protein
MSQEPARIRQDGNAAVALPLDALLAARTVWRAGQGTATANGGESTGHVAL
DALLPDGGWPRRALTELLLPAHGIGEIALLLPTLARMTASSSRVVLVAPP
FIPYAPAWQAGGVVLEHLEVVQAEPREALWAFEQCLRSGACAAVLGWPQT
GDARALRRLQVAADSGNCCAFALRDRRHAVNASPAALRLEFLPERDAWQV
RKCRGGQVPSQPLRLAH
>XCV2438 cointegrate resolution protein S
MSSVKQYLEAATRANTERAYAGAIRHFEVEWGGHLPATAEQVARYLAAYA
GQLALNTLRHRLAALAQWHQVHGFVDPTRAPVVRQVLKGIQTLHPSVEKR
ATPLQLTLLAQVTTWLEDAAAAAQSRGDRAAELRHLRDRALLLLGFWRGF
RGDELTRLQVNHLRLVPGEGMTCFLPHSKSDRQHAGATYKVPALSRWCPV
AATMTWVAAAALHEGPLFRAVNQWGGIAAAPLHPNSLVPLLRRIFREAGL
SSPNDYSGHSLRRGFAGWANANGWDVKALMEYVGWRDVHSAMRYLDGADP
FARQRIEASLSPATPPLLALAAPAPDPVPTTAVEATVTLTRFNSRVRGLA
KAHRLIEQICLQPHQAQRLNADGTRYRLAIAAVDEAAFEETIAMLLDEMH
RIADNHQCFLAVALRDEAGGRHWD
>XCV1138 ISxcc1 transposase
MRKSKFTDSQIVATLKQVEGGRQVKDVCRELGISDATYYVWKSKYGGMEA
ADVQRLRDLETEHNKLKRMYAELAMENHALKDVIAKKL
>XCV1115 RadC family DNA repair protein
MKRTQDLKAQYQLQMDEEGILLAAATILEQRLQRQGRIHSPDQAGDYLIA
RCAHLPHEVFGVVFLDTKHHILATEHLFTGTTDACEVHSRVVAKRALELN
AVAVILFHNHPSGNPEPSEADRKVTKRLEQALGLLDIRVLDHLVIGGRQH
TSLAARGWA
>XCV2405 DNA methyltransferase
MNPQPRTPRGAPQAAPLLYGSVCSGIEAVSLAWQPIGLEAAWFAEIEPFP
SAVLAHRYPRVPNLGDMTAIARQVRAGTVPAPDILVGGTPCQSFSVAGSR
RGLDDPRGALSLAYVELANAIDQIRHQDRRPAATLVWENVPGVLNDRCNA
FGQFLAALAGESRALQPPGGRWAHAGCVSGPRRRIAWRVLDAQYFGVAQR
RKRVFLVASGGNDLDPAEVLFERAGLLGDSCAGRAPWQEAAHDAGPGAEA
AGACAGLAGFAGLKQPYGKITTTFGFSGGIGPVDVAACLMAAGPKHDIRT
ETFMVQSVAGSIAHTLDTANNGKGSSEDGTGKGVPIIAFTAQGSGADATL
DLTPTLRAGGHRNSHANAGVVPAIAFAQNNRGEVRFESGHGQVACTVLSN
GKPGYGVPMVACVSLRGREQGLAAELGGTVAGALRTSGGGADKPYVLAPD
FEAHFRYDWNDPGPGDWSHWRVRRLMPVECERLQGMPDDYTLIPYRGKPA
ADAPRYKAIGNSMAVPCMAWLGQRLVQYLHKTGSTASD
>XCV2407 single-stranded DNA binding protein
MSTHFSGEGNIGSPPEYREFPNGNDEPRRLLRLNVYFDNPVPTKGGDFED
RGGFWAPVEIWHRDAAHWKDLYQKGMRVLVVGRMEREPWTDNEDQPRETW
QINARSVGILPFRIESVTLSPRQQETTQDTQPNPQAAQEPAAPKEPKRRK
>XCV1698 ISxac3 transposase
MARELGIRDTLLTRWKREAQTPGTAAFGGSGTPRDEELARLKRELARVKK
ERDFLREAATFFAKGSP
>XCV0641 putative membrane protein
MAAATPAGKASLQSNSTTLRLDGQASACALRPIRVIRAQCPHAFGTAAAH
PGDNAGSVVLKPRTMRIAPLLFLLVALLPATALALKVRDGDLLFVTAART
GLSGAIDDATATQGQPSFDHVALVAHAGDVAVVLHADEHGSREQPLQAFI
DEATAKQRQIFVYRLTPEHRPAIPDAIAQARRMLGKPYNDTYVQDDNRYY
CSDFIERAFRAHHVFALQPMNFKNLQTGKISPYWIDFYRSKGMPVPQNMP
GTNPNDMATTAALTSMGRLN
>XCV0324 conserved hypothetical protein
MGDVQMGNCLRIPSANMAPALPEHGTAEASTSNPMPHAGNMTAGPQEHTA
VEGCAGRQIADMWLSSLERPARRPSGSRSQPTAQSRPQSKLEKLTEQRQS
MLQRAIILEDQWRSLQERCARTSVGGRQAFNLDILKGIIDRDKQALERMG
GEGSYIAERHLHRIERTLQDFEKKISNQKKLQSHLAKANDFLARLKLLKD
ELSSRGENKDILNDIDLNIKDLEGILNELTRIEANGAGIQYDGCRGGAIA
YFDSVTISLEAMLRSQDSGYFDYMRPALANVLQDGYSPSRRKAVSDAGMR
GGASDGIS
>XCV0626 IS1477 transposase
MKKSRFSTEQIIGFIKQADAGMAVAELCRRHGFSPASFYQWRAKYGGMEA
DEAKRLKELEVQNTRLKKLLAEAHLDIEALKVGFGVKR
>XCV0625 IS1477 transposase
MLEHTPLSERRACRLAGLSRDAFRHAPVPTPATQALSARLVELAQTHRRF
GYRRLHDLLRPEFPSVNHKKIYRLYEEAELKVRKRRKAKRPVGERQKLLA
SSMPNDTWSMDFVFDALANARRIKCLTVVDDFTRESVDIAVDHGISGAYV
VRLLDQAACFRGYPRAVRTDNGPEFTSRAFIAWTQQHGIEHILIEPGAPT
QNAYIESFNGKFRDECLNEHWFTSLAQARDVIADWRRHYNQIRPHSSCGR
IPPAQFAANYRTQQANNAVPFNPGLYQ
>XCV2714 putative transposase (fragment)
MREQRLQRALDVRADEAQAALPDRGETHEAEADHEQAQTEVTKRWEHTKA
NLHAKVEHPFRVIKRQFGHVKVRNRGLAKNITQLLTLFELSNP
>XCVd0021 IS1646 transposase
MQLTFGDAEGLGKRKQTRREIFLAEMEQVVPWQQLLGLVAPHYPVSGRPG
RQPYALATMLRIHLLQQWYALSDPAMEEALHEIPTLRRFAQLGGLDNVPD
ETTILNFRRLLETHGLAARMLEAVNAHLARKGQSLRSGTIVDATLIAAPS
STKNADHARDPEMHQTKKGNQWYFGMKAHIGVDEFSGLVHHVHCTAANVA
DVTVTHALLHGKEDSVFGDSGYTGADNREELQTCKAAFFIAARRSVLQAI
GNKRERAREQRWEHFKASVRAKVEHPFRVIKRQFGYTKVRYRGLAKNTAQ
VLTLFALSNLWMKRKQLLPAMGSVRL
>XCV1850 ISxcC1 transposase
MRYQRRPDRDDEVIALLSELAERFPERGFGKLFQIIRRRGHVWNHKRVWR
VYCLMKLNQRRRSRRRVPTRHPQPLACGDRPNAGWSIDFMSDALWDGRRF
RTFNVIDDFSREALAIEVDLNLPAARVIRTLERIAAWRGYPNKLRLDNGP
EFVALALSEWAERKGIALDFIEPGRPMQNGFIERFNGSYRRGVLDMHLFR
TLSEVREQTEHWLADYNQQIPHDSLGGLTPAEFRDQHQPQTSSFSWH
>XCV2060 putative ATPase
MSKAKRPDSITPDLLHVDRSAMGPLAERMRPRTLEEMVGQKRLLAPDSAL
RRAVESGRVHSMILWGPPGCGKTTLALLLAHYADAEFKAISAVLSGLPEV
RQVLAEAAQRFAGGRRTVLFVDEVHRFNKAQQDAFLPHIERGTILFVGAT
TENPSFELNSALLSRCRVHVLEGVSPQDIVEALQRALRDAERGLGAETIQ
VSEASLLEIASAADGDVRRALTLLEIAAELAAGEGGEITPQTLLQVLADR
TRRFDKNGEQFYDQISALHKSVRSSNPDAALYWLTRMLDGGCDPAYLARR
LTRMAIEDIGLADPRAQSMALEAWDIYERLGSPEGELAFAQLVLYLASTA
KSNAGYAAFNQAKAEVRATGTQEVPLHLRNAPTKLMKTLGYGQDYQYDHD
AEGGIALDQTGFPDAMGERVYYNPVPRGMEIKLKEKLDRLREARALARAD
KAGKSTA
>XCV3410 ISxac3 transposase
MSKRRKFTAEFKRGAVEQASQPGVSCAQVARELGIRDTLLTRWKREAQTP
GTAAFGGSGTPRDEELARLKRELARVKKERDFLREAATFFAKGSP
>XCV3071 Bacterial DNA-binding protein
MAAILSARGPVTCIPQKAGLIGSFHRPHGCVLRRLLAQTICCCASDMQRT
RAWHGQADAFCALFLPLVNESPSKDAFFVLFHRLPIGGAQQLPYISRCRL
GRQTQHHQRIRNTSLMAKTAAKKAAPKKAVKKVAATKTAKPAKAAAAKSA
APKPIKEALSKTGLVAHIAESTQLAPKDVRAVLASLEATAHASLSKKGVG
SFTIPGMLKLTTVHVPAKPKRKGINPFTKEEQMFAAKPATTKLKSRPLKK
LKDAAL
>XCV2983 ada, DNA methylation and regulatory protein (methylated-DNA--[protein]-cysteine S-methyltransferase)
MQTATPDRTQCDRARLARDARFDGLFFTAVRSTGIYCRPVCPAPPPKPAN
VSYYPTAAAASAAGYRPCLRCRPELSPQAQQHLGEESVQRALAMIADGAL
QEQPVQTLADAVGLSARQLQRQFVQQLGATPIQVHGTHRLLLAKQLLTET
ALPVTEVALAAGFNSLRRFNAAFLHGCGMPPSALRKQRTEVPGGELTLRL
GYRPPLDLPAMLAFLQRRAIPGIEQVDANGYRRVIGPPGKASVIEVSAAP
QRAELLLRIGATDPRQIPQIVRRVRRLFDLDADLQAVHATLAPEPLLAEA
LARRPGLRVPGGWDGFEVAVRAVLGQQISVVGAATLAARLVNRHGGHHAD
MPPGLDRSLPTPEQLADAPLEQLGLPRARAATLRALASACAQGQLHFGAG
QRLPDFIAACTALPGIGPWTAHYVAMRALSHPDAFPAGDLILQQVLGAPG
RLSERATDARSQAWRPWRAYAVLHLWHLANDRKDTRA
>XCV1264 alkA, DNA-3-methyladenine glycosylase
MPCHARGFDVEAAFAHVSRRDRALGAWMKRIGPIAPQPGWHKPFDPVDAL
ARAILFQQLSGKAASTIVARVEVAIGAQRLHADTLDRIDDAALRACGVSG
NKALALRDLARREREGEIPSLRRLAFMDEDAIVQALVPVRGIGRWTVEMM
LMFRLGRPDLLPIDDLGVRKGAQRVDKQEQMPTPSELAARGERWGPYRTY
AAFYLWKIADFSVATKVPTPRSQE
>XCV3699 alkB, DNA repair system specific for alkylated DNA
MKIRVALPGAEINWWRGWLPPAQADALMQALLAQAHWEVHRIRMFGRMVD
SPRLSSWIGDPEASYRYSGTRFSPQPWLEVLQPVRMRLEDETGHRFNSVL
VNRYRSGSDAMGWHSDDEPELGAQPLIASVSLGATRRFAFKHRDDAALKQ
MLELGHGDLLLMGGDTQRHYKHALPRTAKPVDERINLTFRQIAVRVSQP
>XCV2587 dbpA, ATP-dependent RNA helicase
MNEFSALPLSPALAPGIDALGYTVLTPIQAQSLPPILQGLDVIAQAPTGS
GKTAAFGLGLLQKLDPAVTRAQALVLCPTRELADQVGKQLRKLATGIPNM
KLVVLTGGMPLGPQLASLEAHDPQVVVGTPGRIQELARKRALHLGGVRTL
VLDEADRMLDMGFEEPIREIASRCDKHRQSLLFSATFPDSIRTLARELLK
EPVEITVEGADSAPEIDQQFFEVDPTYRQKAVAGLLLRFNPESSVVFCNT
RKEVDEVAGSLQEFGFSALALHGDMEQRDRDEVLVRFVNRSCNVLVASDV
AARGLDVEDLSAVVNYELPTDTETYRHRIGRTARAGKHGLALSLVAPRET
ARAQALEAEQGQPLKWSRAPLATARPAQLPQAAMTTLRIDGGKTDKLRAG
DILGALTGEAGLSGAAIGKIAIYPTRSYVAIARAQVAKALAHLHAGKIKG
RRFRVSKL
>XCV2974 deaD, ATP-dependent RNA helicase
MLLCACRLRAAPPELPMTQESSAPLLFADLGLSDAVMKAVANVGYESPSP
IQAATIPALLAGRDVLGQAQTGTGKTAAFALPVLSNADLHQVKPQALVLA
PTRELAIQVAEAFQKYAEAIPGFRVLPVYGGQPYAQQLSALKRGVHVVVG
TPGRVIDHLDRGTLDLSQLKTLVLDEADEMLRMGFIDDVEAVLKKLPAQR
QVALFSATMPPAIRRIAQTYLKDPAEVTIAAKTTTSANIRQRYWWVSGLH
KLDALTRILEVEPFDGMIIFARTKAATEELAQKLQARGMAAAAINGDMQQ
AAREKTIAQLKDGKLDILVATDVAARGLDVERISHVLNYDIPYDTESYVH
RIGRTGRAGRNGDAILFVTPREKGMLRSIERATRQPIEEMQLPSVDAVND
TRVARFMSRITETLAGGQIDMYRDLLQRYEAENNVPAIDIAAALAKLLQG
DAPFLLTPPVRGAREDTAPRERHERADRGDRPRFEPKFERGPRADGERAA
RPPRGDDAGERPRREPAPRGEPEFGMESYRIEVGHSHGVKPANIVGAIAN
EAGLESRYIGRIDIQDDYSILDLPADMPRELLQHLKKVWVSGQQLNMRKL
EDGEAAAAASKPRFPRGGKPSGRPNGPGRPMDRAGAPHRKGPPKPRGE
>XCV4123 dinG, ATP-dependent helicase
MSEVAPPAAPSAPVSTQRSLTDPIKASIRDAYAKLQANTPGFATRRAQSQ
MIGLVSRALATSGGIGIAEAPTGVGKSLGYLTAGVPIALATKKKLVISTG
TVALQSQLVERDIPAFLKATGLEATVALAKGRTRYLCTRNAAELEGDTSQ
NAMFEDEQALYDRPLSPVDADLAKRLAKAYAARTWNGDLDDAPEPISVPL
RMRITTPASGCAGRRCSYAAQCPVLKARTDVREAQIVVTNHALLLSSLSL
GDAENGQPLIAPPADMLLVLDEGHHIAGVAIDQGAANLPLDEMARRTGRL
QILIAAAYRAVDKDKLGNLLPNEAIEVAARVSKLLKAFHAEVERVWKPEP
GERDPLWRAANGKLPPQWGPAIEELGEETRALFNWVHAAHSAIAKGKQDD
SARERLQRSLGLALEMAEQQHNLWSGWRREDKEGQPPMARWITLSRDGDL
ICHCSPVSAAQVLRTMIWNEVDSVVMTSATLTGGGDFQSFAIDNGLPDHA
EMASLASPFDLPNQAELIVPNFPVTPDDREGHPKEVAKYLVRELDWNAKG
SIVLFTSRWKMEKVADLMPLAQRNRVLVQGEGNKSQLITEHLRRIGAGEG
SVLFGLNSFGEGLDLPGEACTTVVITQVPFAVPTDPQTSTLSEWLESRGH
NAFNLIAIPHALRTLTQFAGRLIRSSSDHGRVIILDSRLLTRRYGKRIID
ALPPFKRVIGR
>XCV3740 dinP, DNA polymerase IV
MRKIVHVDMDAFYASVEQRDDPGLRGKPVVVAWRGARSVVCAASYEARTF
GIRSAMPAVRAERLCPDAIFVPPDFARYKAVSRQVREIFHRHTDLVEPLS
LDEAYLDVTHAKTGMQLATEVAQLIRTQIREETQLTASAGIAPNKFLAKI
ASDWRKPDGQFVIAPSRVDAFLLPLKVNRIPGVGKVMDGKLAALGIVTVA
DLRQRPLEELQAHFGSFGQSLYRRARGIDERPVEPDQEVQSVSSEDTFSE
DLALDALDPHILRLAEKTWLATRRTERIGRTVVLKLKTSNFRILTRSYTP
EQPPTSQEALAQIALALTRRVELPTQTRYRLVGVGLSGFSDVEDGAVQGQ
LFGQMPPLE
>XCV0001 dnaA, chromosomal replication initiator protein DnaA
MDAWPRCLERLEAEFPPEDVHTWLKPLQAEDRGDSIVLYAPNAFIVDQVR
ERYLPRIRELLAYFAGNGEVALAVGSRPRAPEPAPAAAAVPSAPQAAPMV
PFAGNLDSHYTFANFVEGRSNQLGLAAAIQAAQRPGDRAHNPLLLYGSTG
LGKTHLMFAAGNALRQANPAAKVMYLRSEQFFSAMIRALQDKAMDQFKRQ
FQQIDALLIDDIQFFAGKDRTQEEFFHTFNALFDGRQQIILTCDRYPREV
EGLEPRLKSRLAWGLSVAIDPPDFETRAAIVLAKARERGAEIPDDVAFLI
AKKMRSNVRDLEGALNTLVARANFTGRSITVEFAQETLRDLLRAQQQAIG
IPNIQKTVADYYGLQMKDLLSKRRTRSLARPRQVAMALAKELTEHSLPEI
GDAFAGRDHTTVLHACRQIRTLMEADGKLREDWEKLIRKLSE
>XCV1535 dnaB, Replicative DNA helicase
MSARPGFRSKRSRDRDDDDYDRPEPRLDQLRVPPHSVEAEQAVLGGLMLA
PDAFDRVNDQLTENDFYRRDHRLIYRAIRELNEKDRPFDAVTLGEWFESQ
GKLEQVGDGAYLIELASTTPSAANIAAYAEIVRDKAVLRQLIEVGTTIVN
DGFQPEGRDSVELLSSAEKAVFKIAEAGARGRTDFVAMPGALKDAFEELR
NRFENGGNITGLPTGYTDFDAMTAGLQPTDLIILAARPAMGKTTFALNIA
EYAAIKSKKGVAVFSMEMSASQLAMRLISSNGRINAQRLRTGALEDEDWA
RVTGAIKMLKETKIFIDDTPGVSPEVLRSKCRRLKREHDLGLIVIDYLQL
MSVPGNSENRATEISEISRSLKGLAKELNVPVIALSQLNRSLETRTDKRP
VMADLRESGAIEQDADMIVFIYRDDYYNKENSPDKGLAEIIIGKHRGGPT
GSCKLKFFGEYTRFDNLAHDSVGSFE
>XCV1226 dnaE1, DNA polymerase III alpha chain protein
MSWDDAIDGVDRDTPGGRMPRAWNVAARLRAANDDISHAHVADGLPAYAE
LHCLSDFSFLRGASSAEQLFVRAQHCGYSALAITDECSLAGIVRGLEASR
ATGVRLIVGSEFALVDGTRFVLLVENAHGYPQLCGLITTARRAASKGAYR
LGRAEVQAQFRDVAPGVFALWLPGAQPQAEQGAWLQQVFGERAFLAVELH
REQDDVARLQVLQALAQQLGMTALASGDVHMAQRRERIVQDTLTAIRHTL
PLAECGAHLFRNGERHLRTRRALGNIYPDGLLQATVELAQRCTFDISKLQ
YTYPRELVPQGHTPASYLRQLTEAGMRERWPDGVPKKIRDDIENELALIA
ELEYEAFFLTVQDVVRFARSKDILCQGRGSSANSAVCYALSITSVDPSKT
RLLISRFLSKARNEPPDIDVDFEHERREEVLQYVYAKYGRERAALAATVI
CYRGKSAVRDVAKAFGLPPDQIALLANCYGWGNGETPMEQRIEEAGFDLA
NPLINKILLVTDHLRDHPRHLSQHVGGFVISDEPLSLLVPVENAAMADRT
IIQWDKDDLETMKLLKVDCLALGMLTCIRKTLDLVRGHRHRDYTLATLPD
EDAATYKMIQRADTVGVFQIESRAQMAMLPRLKPAEFYDLVIEVAIVRPG
PIQGDMVHPYLQRRKDKSLINYPSEGVEQILGPTLGIPLFQEQVMELVIH
AGYDPDEADKLRRSMAAWRRGGDMESHRLRIRALMEGKGYASSFIDQIFE
QIKGFGSYGFPQSHAASFAKLVYASCWLKRHEPAAFACGLLNAQPMGFYS
ASQIVQDARRGSPERERVEVLPVDVLHSDWDNTLVGGRPWRSAADPGEQP
AIRLGMRQVAGLSQVVAQRIVAARTQRAFADIGDLCLRAALDEKARLALA
EAGALHGLVGNRNAARWVMAGVEARRPLLPGSPEERPVAFEAPRAGEEIL
ADYRSVGLSLRQHPMALLRPQMRQRRILGLRELQGRRHGSGVHVAGLVTQ
RQRPATAKGTIFVTLEDEQGMINVIVWSHLALRRRRALLESRLLAVRGRW
ERVDGVEHLIAGDLYDLSNLLGDMQLPSRDFH
>XCV1463 dnaE2, DNA polymerase III alpha chain
MSTSRFVHLHVHTEFSLADSTIRVPEKPDQADPKKAKQANLLSRAVELDM
PALAVTDLNNLFALVKFYKAAEGVGIKPIAGADVMIATPDMTPWRMTLLC
RDREGYLSLSRLLTRAWMEGHRPEGGVAIHPEWLQAGHANLFALAGRDSL
AGRLFNEGRADLAEQQLADWQRVFGDGLHLELTRTGREGEERFNQFALHA
AGVRGLPVVASNDVRFLYASDFNAHEARVCISSGRVLDDPKRPREYSDQQ
YMKSSEEMAALFADIPDAIDNTHALAQRCNIEMRLGTYFLPAYPVPEDET
LDSWIRSQSRQGLAARLEKNPIAPGKTRQDYVDRLEFELDTIIKMGFPGY
FLIVADFIQWGKNQGIPIGPGRGSGAGSLVAWALQITDLDPLPYNLLFER
FLNPERVSMPDFDIDFCMDRRDEVIDYVARKYGRERVSQIITYGTMAAKA
VVRDAGRVLGFSYGLVDSVAKLIPNILGITLKDAMGEGKDSEMASPDLIQ
RYQVEDDVRDLMDLARQLEDLTRNAGKHAGGVVIAPDPLSEFCPLFAEHD
EDGRGKNPVTQFDKDDVEAVGLVKFDFLGLRTLTIIDWAVKAINVRHARA
GIDPVDITAIPLDDVPTYKGVFASGNTGAVFQFESSGMRRLLKDARPDRF
EDLIALVSLYRPGPMDLIPDFNARKHGQQEIVYPDPRTEVILKDTYGIMV
YQEQVMQMAQIVGDYSLGGADLLRRAMGKKVPAEMAKHREIFREGAAKGG
VSAAKADEIFDLMEKFAGYGFNKSHAAAYALVSYQTAWLKRHYPAEFMAA
TLSSDMDNTDKVVGFLDEVRNLGLTVKPPRVNESAYMFEAASPDTIQYGL
GAIKGVGQGACEAIVEERQRGGPYTTLLDFCTRVGTARLNRRTLEAMINA
GAMDGLGKNRASLMLQLPEVMKATEQMARERASGQNSLFGGPDPSAPAMR
LDLPESKEWPLGQLLTGERETLGFYLSGHPFDPHREEVRELVGCDLGALE
KILASQQRGGGGGGGDGEKRAWRPEVSAILAGQVVGVRRKGDSQVFVQLE
DGRGRVECSAFSDAMAEFGHLLTRDRILIVKGGLREDEFNDGYSLRIRQC
WDYEQICADHAQRLSLRLDLREKHAFSRIDALLAKHRPGKTPLRLDLLLR
APSGGVAGMLDLNGTHSVRIDQQLMDSLRADPAVRTVKIKYSPPWA
>XCV3994 dnaG, DNA primase
MARIPDAFIDELLARTDIVEVVGGRVPLKRQGKEYSARCPFHDERSASFT
VSPTKQFYHCFGCGAHGTAISFLMNYDRLEFLDAVDELAKRAGMDIPRET
QQRTPQQQDDSRELYSALDAATKFFQRQLEGSERARDYLDGRGVDADNRA
RFQIGYAPDGYSALKDTLGTDARRMSVLERAGLFSKNDRGHVYDKFRDRV
MFPIFDRRGRVIAFGGRIMGAPADGRDPGPKYLNSPETALFHKGRELYGL
WQVRQANQKIERLIVVEGYMDVVSLFQFGVTQAVATLGTATTPEHAELLF
RNAPDVYFCFDGDNAGRKAGWRALESVLPRMKDGRQAFFLFLPDGEDPDT
IVRKEGAQAFDQRLKQATPLSQFFFDEMSREINLHTLDGKARLAERARPL
LAQIPEGAFGDLMKQELARLTGVGATASAQQSAPRLRLPARVGAPTQKRS
LVRASIAILLQRPSLAMSLEGVHDFSGLRLPGIDLLMELLDLVRQRPEIS
TGALLEHFAERQELAALQKLAAQELPGDEHSWTLELHDVVAQLDKQLLRQ
RVEELQAKQRAQGLDDTDKYEMRELLKALAAL
>XCV0002 dnaN, DNA polymerase III beta chain
MRFTLQREAFLKPLAQVVNVVERRQTLPVLANLLVQVKDGQVSLTGTDLE
VEMISRTLVEDAQDGETTIPARKLFDILRALPDGSRVTISQTGDKVTVQA
GRSRFTLATLPSNDFPSVDEVEATERVVVPEAGLKELIERTAFAMAQQDV
RYYLNGLLFDLRDGLLRCVATDGHRLALCEMELEKAGGAKRQIIVPRKGV
TELQRLLEGADREVELEVGRSHIRVKRGDVTFTSKLIDGRFPDYEAVIPI
GADREVKVDREALRASLQRAAILSNEKYRGVRVEVSPGQLKISAHNPEQE
EAQEEIEADTKVDDLAIGFNVNYLLDALSALRDEHVVIQLRDANSSALVR
EASSEKSRHVVMPLRL
>XCV1090 dnaQ, DNA polymerase III epsilon chain
MRQIILDTETTGLEWRKGNRVVEIGAVELLERRPSGNNFHRYLKPDCDFE
PGAQEVTGLTLEFLADKPLFGEVVDEFLAYIDGAELIIHNAAFDLGFLDN
ELALLGDHYGRIVERATVVDTLMMARERYPGQRNSLDALCKRLGVDNSHR
QLHGALLDAQILADVYIALTSGQEEIGFASADAGQQTDAASGVIAFDPAL
LLPRPRIAVTASELQAHEARLAQLRKKAGRALWDPPVEEIAVAG
>XCV1127 dnaX, DNA polymerase III tau and gamma subunits
MSYLVLARKWRPKRFAELVGQEHVVRALSNALDSGRVHHAFLFTGTRGVG
KTTIARIFAKSLNCETGTSADPCGTCPACLDIDAGRYIDLLEIDAASNTG
VDDVREVIENAQYMPSRGKFKVYLIDEVHMLSKAAFNALLKTLEEPPEHV
KFLLATTDPQKLPVTVLSRCLQFNLKRLDEDQIQGQMTRILAAEQIESDP
SAIVQLSKAADGSLRDGLSLLDQAIAYAGGALREDVVRTMLGTVDRTQVG
AMLQSLADGDGARLLQVVAALAEFSPDWSGVLEALAEALHRVQVQQLVPS
VAFVGDGIDPTPFAAQLRPEVVQLWYQMALNGRRDLYLAPSPRAGFEMAV
LRMLAFRPAAAVPAGGSDDGRGATAGGGARSGAAGGQAAAPAAAAPAVVA
SPAAVTDTMPAAEASLPASATRATPISAAPPVVVLAPQESSPDSRASAAS
ARNDDTPPWAVDDAPVRAQVAPAPDTMAVLAPEAAMAPPAATVELAHPDA
IASDAVVEAPASVAVSSLVEPSSLEEPAVVAPPATAGAASDSVTDATALL
DDGRIADAEQWLELVTRSGLNGPSRQLAANAAFIGHRDGVLRLALAPGFE
YLNSERSIANLAQALAPVLGNPPRIVIETGSADVETLHERANRQKGERQS
AAETAFMNDPTVQLLIQQQGARIVPDSIRPYDE
>XCVd0027 dotA, putative TraY/DotA-like type IV secretion system protein
MAAPTPMKPGRSPEPRPPHVASFVRHQGTPRSGAKLSPAARGGETRCHRA
CSACGAAMAGLGHPTHLAPKHHRWNFWLHAHFPFPCPVTPKCRRYFRGHH
ALTWSYSMTRSLAVLGALMIPNLARAQDPSKPGFFKPPADDTSVSFIRDV
FGSIVDTIMTGQNVDQASADTALAAGFEVFGLGILALGMLFVIFTTVKGA
VDTAHDGEFLGKKMSSVWVPLRTAAGTAFLLPLKSGFSLVQIAVLWIGIH
GVGLADQVWLAMLDKMVETGQMGRPHLPDSRPLAANILRYEVCAAAMNKQ
YETEGRALKIEVLPKKTAMINTGDALKFDNILYPGGFLDLAQSAAGSAFS
VTGLQWSAVGSGGYMNQNVCGELEWQESHESSESNGAPYIDKAPILRAQA
QAVQKMVSELRPVAQAIVAGEKPAAGALERVANTYELSLQTAALSVVNRA
NKNRNSRFLTYAKEGGWIFAGTYYNHIIHMSDAIQSAVNSLPASSAQTIT
DKEAADTLILYQDSLVTANEYIRNSSQSAYRAYEAQNQAIGFTGDKIPSN
FEEMKIWLSRPALAGINQMTQEIAGSNLSHVAQMKNVGDTIMAVAWTIQG
AQFIVAGFGGGLWDDAVTLGSYDIGASIETLTPAVAFLFMTLLTAGAFLA
FYVPMIPYIIWITGIIKWLTVLFESVIAAPIWAAAHVHPDGDDQGGRAGP
GYMIILSVFLRPTLMIFGLVGSIVVAQPVAHYVNLTYITQVQGAMGNSAN
AIGALIAYTAIYAILMTIVLHSVFGFINWIPDNVLRWIGSAVGMHGIADN
EEHGVKGAFFRSTESVSKGTGSHKPSGGGGGGSKPVNTGGSEPGGGGTGN
DVHSTKLPGA
>XCV0948 exo, exodeoxyribonuclease IX
MTTPTDPLDAAPLAIRRPTPLYLVDASLYVFRAWHSIPDEFQDVQGWPTN
AVHGFARFLLDLLEREDPQHITIAFDEALDSCFRHAIYPAYKGNRTPAPD
ALRRQFAHCKALCAALGLSVLAHRDYEADDLIGSALHSVRAHGLRGVIVS
ADKDLSQLLLEHDEQWDYARNQRWGIDGVKARHGVHAHQIADYLALCGDA
IDNIPGVTGIGAKSAAVLLAHFGSLDALLERIDEIPFLRLRGAAQMAVRL
REQREHALLWRQLTTIALDAPLALTEAGFTRAHADADMLTGLCESLRFGP
LTRRRLLAASTGAAAPFPPVSLAQGPRP
>XCV4015 exoA, exodeoxyribonuclease III
MRIISFNANGLRSAASKGFFAWFAAQDADVLCVQETKAQEHQLAGPDFLP
TGYKAWFRDASTKKGYSGMAIYSRHEPDEVRTALGWPEFDEEGRYIEARF
GNLSVVSFYIPSGSSGELRQDYKFQVMQWLRPILEQWLASGRQYVLCGDW
NIVRTALDIKNWKSNQKNSGCLPPERDWLNGLCADAPEDANPAEGRGWVD
SYRVLHPQGQDYTWWSNRGAARANNVGWRIDYQLVTPGLRDTLKACSIYR
EERFSDHAPYIVDYAQ
>XCV2789 gumA, Integration host factor alpha subunit
MALTKAEMAERLFDEVGLNKREAKEFVDAFFDVLRDALEQGRQVKLSGFG
NFDLRRKNQRPGRNPKTGEEIPISARTVVTFRPGQKLKERVEAYAGSGQ
>XCV1672 gyrA, DNA gyrase subunit A
MAETAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLY
AMHELGAHSNKAYFKSARIVGDVIGKYHPHGDQSVYDTLVRMAQPFSLRY
MMVDGQGNFGSVDGDSAAAMRYTESRMSRLAHELMADIDKETVDFQPNYD
EKEQEPTVMPTRFPSLLVNGSAGIAVGMATNIPPHNLTEAINACIALIDT
PELDVEGLMEYIPGPDFPTAGIINGTAGIAAGYRTGRGRVRIRAKADVEV
ADNGREAIVVTEIPYQVNKARLIEKIAELVKEKKLEGISELRDESDKDGM
RIYIEVKRGESAEVVLNNLYQQTQMEAVFGINMVALIDGRPQLMNLKQML
EAFIRHRREVVTRRTIFELRKARARAHVLEGLTVALANIDEMIELIKTSA
NPQEARERMLAKTWQPGLVGALLGAAGAEASKPEDLPPGVGLIQGFYQLS
EVQASQILEMRLHRLTGLEQEKLTDEYKQLLGVIEGLIRILENPDVLLQV
IRDELINIREEYGDERRTEIRHSEEDLDILDLIAPEDVVVTLSHAGYAKR
QPVSAYRAQRRGGRGRSAAATKEEDFIDQLWLVNTHDTLLTFTSSGKVFW
LPVHQLPEAGSNARGRPIINWIPLEAGERVQAVLPVREYADNRYVFFATR
NGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDRDVLLFASNG
KTVRFGESTVRSMGRTATGVRGIRLTKGEEVVSLIVAERAGGVEEEIEGE
EVDDVVEATDGGESAVIEVADDGNVAYILTATENGYGKRTPLTEYPRKGR
GTQGVIGIQTTERNGKLVRAVLLGATDEVLLISDGGTLVRTRGSEISRVG
RNTQGVTLIRLSKGEKLQAVERLDASLDEVDEVVDEAGASVSEAPPTTDA
>XCV0004 gyrB, DNA gyrase subunit B
MRSGYRRLRPCCGANGTRMTDEQNIPPTPNGTYDSSKITVLRGLEAVRKR
PGMYIGDVHDGTGLHHMVFEVVDNSVDEALAGHADDIVVKILADGSVAVS
DNGRGVPVDIHKEEGVSAAEVILTVLHAGGKFDDNSYKVSGGLHGVGVSV
VNALSEHLWLDIWRDGFHYQQEYALGEPQYPLKQLEASTKRGTTLRFKPS
VAIFSDVEFHYDILARRLRELSFLNSGVKITLIDERGEGRRDDFHYEGGI
RSFVEHLAQLKSPLHPNVISVTGEHNGIMVDVALQWTDAYQETMYCFTNN
IPQKDGGTHLAGFRAALTRVLSTYIEQNGIAKQAKVALTGDDMREGMIAV
LSVKVPDPSFSSQTKEKLVSSDVRPAVENAFGARLQEFLQENPNEAKAIT
GKIVDAARAREAARKARDLTRRKGALDIAGLPGKLADCQEKDPALSELFI
VEGDSAGGSAKQGRNRKNQAVLPLRGKILNVERARFDRMLASDQVGTLIT
ALGTGIGRDEYNPDKLRYHRIILMTDADVDGSHIRTLLLTFFYRQMPELI
ERGYIYIGLPPLYKLKQGKSELYLKDDAALNAYLASNAVEGAALIPATDE
PPITGEALEKLLMLFTSANEAIARNAHRYDPALLTALIDLPPLDVEKLQA
EGDQHPTLDALQAVLNRGTLGTARYQLRFDPGSENAPATLVAIRRHMGEE
FTQVLPMGAFESGELRPLREVSLALHDLVREGAQIVRGNKSHPITSFAQA
HAWLLDEAKKGRQVQRFKGLGEMNAEQLWETTVNPDTRRLLQVRIEDAVA
ADQIFSTLMGDVVEPRRDFIEDNALKVSNLDI
>XCV2935 holA, DNA polymerase III delta subunit
MMELRPEQLAGQSSQPLQPVYLIAGPETLRVLEAADAVRARARAEGIGER
EVFDADGREFDWNQLDASFNAPSLFSPRRLVEVRLPSGKPGKDGAEVITR
FCANPPPDVVLLITANDWSKAHHGKWAEAVGRIGTIAVAWAIKPHELSDW
IERRLRAHGLRADAAAVQRLSERVEGNLLAAAQEIDKLALLADGKTLDLE
AMESLVADAARYDVFRLAETTLSGQPAAVIRMLAGLRGEGEAVAALMPIL
IKELLRTASLAKVQANGGNLAAEMKAQGLWESRQAPFKRALQRHPEPHRW
ERFVAEAGLVDRMAKGRADGDAWVGLERLLVAVAEARAVRLLA
>XCV1151 holB, DNA polymerase III delta' subunit
MTAAFSPWQQRAFDQTVAALDAGRLGHGLLICGPEGLGKRAVALALAEHV
LAASPDPTLAQRTRQLIAAGTHPDLQLVSFIPNRTGDKLRTEIIIEQVRE
ISQKLALTPQYGIAQVVIVDPADAINRSACNALLKTLEEPSPGRYLWLIS
AQPARLPATIRSRCQRLEFKLPPAHEALAWLLSQGVSERAAQEALDAARG
HPGLAAQWLREDGLAVRRAVAQDLEQIASGRAGAVDVAQRWTNDGQADQR
LRHAADLALAQASAGLTDPSRLHKLATWFDAANRTRDLLRTTVRADLAVT
ELLLSWREGERQPRSRGTR
>XCV3683 holC, DNA polymerase III holoenzyme chi subunit
MPRADFYLIAKPRFLNEPLRLVCELARKANDANLPTLILARDTQQAEALD
DLLWAFDDEAYVPHQIAGTDEEDELAPVLIAAPEFAAPSRPLVINLRDDP
YLGACDRVLEVVPADPAAREPLRERWKQYKALGLELTKYDM
>XCV3253 hrpA, ATP-dependent RNA helicase
MSAIDSTLADTLRERRRAVDGAMSRDRGRLLGLWSRWQGKPGNPQVRDAF
EQALAASQAQRQARAEQQPAITLDDQLPIAREAERIIALIRNHQVVVIAG
ETGSGKTTQLPKLCLAAGRGAAGMIGCTQPRRIAARAVAARVADELKTPL
GTTVGFQVRFTDRVSDQSRIKFMTDGILLAEIASDRWLSSYDTIIVDEAH
ERSLNIDFLLGYLKQLLRKRSDLKLIVTSATIDTERFARHFDDAPVISVE
GRTFPVEVRYRPLEGDTGDSDDGEHGSGRDGERSVNDAIVAAIDEITRID
PRGDVLMFLPGEREIRDAHQSLERRKYRETEVVPLYARLSAADQDRVFNP
GPRRRLVLATNVAETSLTVPRIRYVVDPGLARVKRYSPRQKLDRLHIEPI
SQASANQRMGRCGRIAEGICYRLYAEADFAARPAFTDPEIRRSSLSGVIL
RMLQLGLGRIEDFPFLEAPDERALADGWQQLLELGAIDAQRRLTATGRQM
ARLPVDVKLARMLVAAQQHGCLREMIIIAAFLGIQDPRERPPEAREAADN
AHALFADARSEFVGILRLWDAYRQVHEDLTQSKLRDWCNRHFLGFLRMRE
WRELHRQLRLLCEELGWSEEPANVMLAPLLAGASAPAREDGHSVNRPTRG
QLHRAARLAREGKPDPNAAPVQPAPAATNKQAEAAEASARTTERERAAAY
QALHRALLAGLPTQIGHRTEKGDYLAARQRRFVPFPGSALARKPPPWILA
ATLLDTQKVWGMTNAAIEPDWAIAELPHLLARKHFDAHWSRAQGQVVASE
QISLFGLVLAPKKPVHFGKIDPAAAHDLFVRQGLVTGEINTRAAFVADNL
KVLEQAREEEAKLRRAGIVADEGWQARWYLDRIPAELHSASGLDAWWKTL
PPDKRRSLHWSLNDLLPGEGSEADRFPKYFPLGDARLPLHYRFEPGAIDD
GVTLEVPLHLLNALDPARLSWLAPGFVADKASALIRSLPKAQRRNYVPAP
DFGRAFYEAFSIASADDIRGELARFLTKATGTQVTALDFDEQALDTHLLM
NLRLRDDDGKVLAESRDLDGLRARFGERAGQAFAARAGRALAAEGLRDFP
SAPIPEQVAGEAGVPAYPALVDQGDNAALHIFADRNDAARAHPRGVRRLL
EIALADKIKQARKQLPVSPKTGLLYAAIESQERLRGDLVDAALNAVLADG
LGAIRDPGAFAQRRDDAGKRLFGEAMERLKLAESILGAVAELKPLLEAPL
MGWARGNLDDMEQQLRALVHAGFLRDTPADALANYPRYLRAMILRTERAK
RDPARDQARMLELKPFVDAVEAAAAHGLQDRQEWQALRWDLEELRVSVFA
QELGAKSGVSAKKLSQRVAALRS
>XCV0300 hrpB, ATP-dependent helicase HrpB
MRCIVVSRNAAGCRQLRTGLCRTLCSRNVSFPRMTDPAFPISPLLPQIRD
SLAAHPRLVLEAPPGAGKTTQVPLALLDAPWLAGRRIVMLEPRRVAARSA
AQFMARQLGEPVGETVGYRIRFENKTSARTRIEVVTEGILTRLIQDDPML
ESVGALLFDEFHERHLAGDLGLALALDVQAQVRDDLRIVAMSATLDGERL
AGFLEAPRLSSAGRSFPVEIAHFPARRDEALEPQTRRAVEHALSTHPGDV
LVFLPGQREIARVHRALQDALDPAVQVLPLHGELSVEAQSQVLQPDPQGR
RRVVLATNVAESSVTLPGVRVVIDSGLAREPHYDPNSGFSRLDVAAIAQA
SAEQRAGRAGRVASGWAYRLWPQSQRLEPQRRAEITQVELAGLALELAAW
GSSALRFVDAPPSGALAAARELLRRLGALTASGGITTLGRRMLALGTHPR
LAAMLAQAGDAPRVALACDLAALLEARDPLRQGGDGLAARWRALAAFRQG
RSAADADRGGLAAIDSAAKQWRRRLRCDSAPPSSVEAHALGDLLSHAFPD
RIAARHPADPLRYLLANGRSARLFDHSDLRGEPWLVASELRYEAKDALLL
RAAPVDEAYLRRSLPERFVQQDVVQWDADKRALVARRQSSFDRIVLDSRP
AGRVDPAHAAAALTDAVRQLGLDALPWTENLQQWRARVQSLQRWMPELAL
PDLSDATLLETLDTWLRPAFAGKTRLDALDEASLGEALKSALPWERRQWI
DRHAPTRISVPSGMERPISYALDHAGQPLPPVLAVKLQELFGLAETPRIA
DGRIRLTLHLLSPGGRPLQVTQDLKSFWANTYPDVKKEMKGRYPRHPWPD
DPWTAAATHRAKPRGT
>XCV1084 hupB, histone-like protein
MNKTELIDGVAAAADISKAEASRAVDAVVSEITKALKKGDAVTLVGFGTF
QVRERAERTGRNPKTGDSIKIAASKNPAFKAGKALKDAVN
>XCV2495 ihfB, Integration host factor beta subunit
MCQSKKASLPMTKSELIEILARRQAHLKSDDVDLAVKSLLEMMGQALSDG
DRIEIRGFGSFSLHYRPPRLGRNPKTGESVALPGKHVPHFKPGKELRERV
SSVVPVDVVDTAD
>XCV1103 kdkA, 3-deoxy-D-manno-octulosonic acid kinase
MVSFDATEALAPYREGRGYGAILFDRERLRQADASLFSPQSWGDRARPVD
AGGRGGAWFVDAPFGHSVLRQYLRGGMAARVSRDRYLWKGAGRTRSFAEF
RLMRELIKRKLPVPRPLAACYLREGVGYRAALLMERLENVRSLADHAQVA
GRGAPWEATGQLIARFHRAGLDHADLNAHNILFDAGGHGWLIDFDRGVLR
IPATRWRERNLKRLHRSLLKLRGNRSREDVDKDYARLHRAYELAWGRGY
>XCV2612 lig3, ATP-dependent DNA ligase
MSLSEYRRKRSFNKTREPEPGKALPPGQRAIFVVQLHHASRRHYDFRLQV
GDALKSWAVPKGPSYDPKVKRMAVEVEDHPVDYASFEGEIPKGEYGGGHV
AQFDHGVWATAGDPEAQLAKGHLRFELFGNKLKGGWHLVRSGKPARQPQW
LLFKDDDAYAVTLEADDLLADVAAAPAEDVRRAGAGKTQRKALTTVPPLA
AKRRGTWAKQALALSNARRAQMEDAPFAPQLAKLGQSPPEGAQWLHEIKW
DGYRILATVTDGNVRLWSRNALEWTDKTPEIADAIRSLGLRSAQLDGELI
AGRGTKDDFNLLQATLSGERQVPLALAVFDLLHVDGVDISEAPLRERKRL
LQQVLEAAPHTHLAYSSHVEGDGTEAFRVAGQQHFEGIISKRADRPYRDG
RSDDWRKTKQLASQEYAVVGYTAPKGSRSGFGSLLLATPDPVHGWLYVGR
VGSGFSDALMREVTPQLEGGGRKPTAHIPTEDTDLRGATWFAPRFVVEVF
YRGIGGQQLLRQASFKALRPDKRIADLADSDAGNGPATPSSARRSATTRA
AKDAATQVPKRAATRATAPARKSAVATPSSAALPTLSSPTKLIYPDIRAT
KGDVWDYYQAVMDHLLPQIVGRPLSIIRCPSGAEKPCFFQKHHTAGLERV
SSVKLTEETGTNAYYLVVEDAPGLLELVQFNALEFHPWGSHADRPDVADR
VVFDLDPGPDVPFAEVKRAANDIRKLLAQLELESFLRVSGGKGLHVVVPL
NPGCDWEVTKRFAKGFADALAQAQPQRFIATATKRLRNKRIFVDYLRNGR
GATAVASYSLRGRPGAPVALPLAWSDLSKLQRADAFTLRDVPEKLRRRRK
DPWADMDGIRQNLARWAEQDQD
>XCV1668 ligA, DNA ligase
MTASPDPAQRIDALRRRIEDANYRYHVLDEPQMADADYDKLMRELEALER
AHPELASADSPTQRVGHLAASRFAEVRHALPMLSLGNAFSEEEVTEFVRR
ISERLEVKQPLFSAEPKLDGLAISLRYENGEFVQGATRGDGATGEDVSAN
LRTVKAIPLRLRGEGWPQVLEVRGEVYMPRAAFEAYNAQMRAQGGKVLAN
PRNGAAGSLRQLDARITAQRPLSFFAYGVGEVSEGALPQTHSAILAQLRA
WGFPVSALVEVVQGSDGLLAYYQRIGAARDGLAFDIDGVVYKLDDLAGQR
EMGFVSRAPRWAIAHKFPAQEQSTTVEAIEIQIGRTGAATPVARLKPVHV
AGVIVTNATLHNADQIARLDVRVGDTVIVRRAGDVIPEVAAVVADQRPPG
TQAWQMPTQCPVCGSQIVREEGQAVWRCSGELTCPAQRKEAFRHFVSRRA
MDVDGLGEKFIEVLVDSGLVKGVADLYLLSVDQLLQLRLISTAESPHAFL
REAREHLASGAYAQLETSVVGIGVDLAGERDVPQTWQADLLRAGLPRFDW
NRKKIATKWAENLIEAIETSRDTTLERFLFALGIEHVGESTAKALSAWFG
DLELIRHLPWPLFKRVPDIGGEVARSLGHFFDQAGNQQAIDDLLQRGVRI
GDTHPPSPKLREALSFASVLEDMDIPKVTPVRAQQLAASVDSFAALRTAG
ADALQQAGVPAPVVAALLQWLDRPENTALANAAQQAMETVLARLPQADAL
QTGPLDGQTVVITGTLAALTRDAAKQRLEALGAKVAGSVSKKTAFLVAGE
EAGSKLDKAQSLGVEIWGEARLLAFLGDHGQQP
>XCV0595 mdcC, malonate decarboxylase delta subunit
METLRYRFDGQRGARAGLEHALVGVVASGNLEVLVERVPLEGAMEIEILT
AARGFGAIWQAVLDDFAARHPLRDVRISINDVGATPAVVSLRLEQALEVL
QGADA
>XCV3018 mfd, transcription-repair coupling factor
MPSPTFPSPPLPKSGQLRAYWRAPSSPTALAWSIARAAEAHAGPLLVIAR
DNQSAHQIEADLHALLSEQAALPVVPFPDWETLPYDQFSPHPEIISQRLA
ALHRLPGLTRGVVIVPVQTLLQQLAPLSYIVGGSFDLTVGQRLDLDAEKR
RLESAGYRNVPQVMDPGDFAVRGGLLDVFPMGADTPLRVELLDEDIDSIR
VFDPESQRSLDKVDAVKMLPGREVPMDDASVERVLACLRERFDVDTRRSA
LYQDLKSGLAPSGIEYYLPMCFAKTATLFDYLDKRVLPVIATGVSNAADA
FWAQAQNRYEQRRHDVERPLLPPDELYQSPDALRERLNKLARIEVWASDH
ARIDEAAPLGDQPLPPLPVAAKDAPAGQALATFLSHYPGRVLIAADSAGR
REALMEVLAAAQLKPELVADVPAFLAGTLRFAITVAPLEDGFALDQPQIA
LLTERQLFPERANQPRRTRRVGREPEAIIRDLGELSEGAPIVHEDHGVGR
YRGLIVLDAGGMPGEFLEIEYAKGDRLYVPVAQLHLISRYSGASAETAPL
HSLGGEQWTRAKRKAAEKVRDVAAELLEIQARRRARAGLALQVDRAMYEP
FAAGFPFEETGDQLAAIDATLRDLGSSQPMDRVVCGDVGFGKTEVAVRAA
FAAASAGKQVAVLVPTTLLAEQHYRNFRDRFADYPMKVEVLSRFKSTKEI
KAELEKVASGEIDVIIGTHRLLQPDVKFKDLGLVVVDEEQRFGVRQKEAL
KAMRANVHLLTLTATPIPRTLNMAMAGLRDLSIIATPPPNRLAVQTFITA
WDNTLLREAFQRELSRGGQLYFLHNDVESIVRMQRDLSELVPEARIGIAH
GQMPERELERVMLDFQKQRFNVLLSTTIIESGIDIPNANTIIINRADRFG
LAQLHQLRGRVGRSHHRAYAYLVVPDRRSMTSDAEKRLEAIASMDELGAG
FTLATHDLEIRGAGELLGEDQSGQMAEVGFSLYTELLERAVRSIRQGKLP
DLDAGEEVRGADVELHVASLIPEDYLPDVHTRLTLYKRISSARDPDALRE
LQVEMIDRFGLLPDPVKHLFAIAELKLQANALGVRKLDLGENGGRLVFEA
KPAIDPMTIIQMIQKQPKIYTMDGPDKLRIKLPMPEGADRFNAARGLLAA
LSPG
>XCV2602 mutL, DNA mismatch repair protein MutL
MAIRQLPEILINQIAAGEVVERPASVVKELVENALDAGATRVDIELEEGG
VRLIRIRDNGGGIAPDELPLAVSRHATSKIASLDDLETVATLGFRGEALP
SIASVSRFTLTSRRHDAEHGSALEIDGGRLGEVVPRAHAPGTTVEVRELF
FNVPARRKFLRAERTELGHIEEWLRSLALARPDVELRVSHNGKPSRRYKP
GDLYSDARLGETLGDDFARQALRVDHSGAGLRLHGWVAQPHYSRASTDQQ
YLYVNGRSVRDRSVAHAVKMAYGDVLFHGRQPAYVLFLELDPARVDVNVH
PAKHEVRFREARLIHDFVYRTLQDALAHTRAGVTPNSIGSDGAGDPGATA
GGLGNIAGSGVPNHGNAAGSSGSGYNYASWTPSQTPLGLRVDEARAAYSA
LYAPPPSSAQQSAGMPSMAGTGLPATAQDSGVPPLGYAVAQLHGIYILAE
NAEGLIVVDMHAAHERIGYERLKNAHDSIGLHAQPLLVPMTLAVGEREAD
TAEREAETLATLGFEITRAGPQSLHVRSIPALLANAEPEALLRDVLGDLR
EHGQSRRIASARDELLSTMACHGAVRANRRLTVPEMNALLRDMEATERSG
QCNHGRPTWARFTLSDIDRWFLRGR
>XCV4390 mutM, DNA-formamidopyrimidine glycosylase
MLDALMPELPEVETTLRGLSPHLVGQRIHGVILRRPDLRWPIPEQIERLL
PGATITNVRRRAKYLLIDTDAGGSALLHLGMSGSLRVLPGDTLPRAHDHV
DISLQNGRVLRFNDPRRFGCLLWQSGTQTHELLAALGPEPLSDAFTGDYL
HALAQGRRAAVKTFLMDQAVVVGVGNIYAAESLHRAGISPLREAGKVSLA
RYRRLADAVKDILAYAIQRGGTTLRDFISPDGAPGYFEQELSVYGREGEA
CKQCGRVLKHATIGQRATVWCGSCQR
>XCV1352 mutS, DNA mismatch repair protein
MQSTDTKEKNKNASGAVEHTPLMKQFFAAKSDYPDLLLFFRMGDFYELFY
DDARKAARLLDITLTQRGSSGGAPIPMAGVPVHAYEGYLARLVALGESVA
ICEQIGDPALAKGLVERKVVRIVTPGTVTDEALLDERRDTLLMAISRSKH
GYGLAWADLAGGRFLVNEVDSADALEAEIARLEPAELLVPDEDNWPDFLR
GRTGVRRRPPWLFDADSGRRQLLAFFKLHDLSGFGIDDKPCATAAAGALL
GYVEETQKQRLPHLTSIAMEVASEAISMNAATRRHLELDTRVDGDTRNTL
LGVLDSTVTPMGGRLLRRWLHRPLRLRDVLLQRHHAVGTLIDAGADADLR
EAFRALGDLERILTRVALRSARPRDFSTLRDGLALLPKVRTILAPLDSPR
LQTLHAELGEHDATAHLLISAVAETPPLKLSDGGVIATGYDAELDELRRL
STNADQFLIDLEQRERASSGIATLKVGYNRVHGYYIEISKGQAEKAPLHY
SRRQTLTNAERYITEELKSFEDKVLSARERSLSREKLLYEGLLDALGTEL
EGLKRCAGALSELDVLAGFAERAQALDWSQPELDHAPCLRIEHGRHPVVE
AVREQPFEPNDLDLHSDRRMLVITGPNMGGKSTYMRQNALIVLLAHIGSY
VPASRAVIGPIDRILTRIGAGDDLARGQSTFMVEMAETSYILHHATPQSL
VLMDEIGRGTSTYDGLALADAVARHLAHTNRCYTLFATHYFELTALADES
HAGGASGIANVHLDAVEHGERLVFMHAVKDGPANRSFGLQVAALAGLPKA
AVTQARRRLVELEQRGGESHSAQMAPTALDAPQQFGLFTAPSSAAQEALQ
ALDPDELTPKQALEALYRLKALL
>XCV2752 mutY, A/G-specific adenine glycosylase
MPADHATPSADAFVDRLLHWFDGHGRHDLPWQHPRTPYRVWLSEIMLQQT
QVAVVIPYFHKFMARFPALADLAAADNDTVMAQWAGLGYYARARNLHAAA
KQCVALHGGQLPRDFDALLALPGIGRSTAGAILSQAWNDRFAIMDGNVKR
VLARFHGIAGYPGLPAIEKQLWQLATSHVAHVPAGRLADYTQAQMDFGAT
LCTRGKPACVLCPLQADCIARRDGLVEALPTPKPGKQLPEREATALLLQN
AEGHILLQRRPPTGIWAALWTLPQADTHSGMRAWFAAHIDGNYERADEMP
LIVHTFSHYRLHLQPLRLRKVALRPAVGDNDDLRWVAPADLASLGLPAPI
RKLLDAL
>XCV3030 nfi, Deoxyribonuclease V
MQTNDPVFAGWDGSVIQARQLQQQLARRVVLDDAVSATPQLLAGFDVGFE
DDGQTTRAAAVLLDAQTLLPLETHVARVPTSMPYVPGLLSFRELPALLRA
LALLSRTPDLVFIDGQGIAHPRRLGIAAHFGVVTGLPCIGIAKQRLAGSF
AEPGPERGDHTPILLGGAQIGWALRSKPRCNPLIVSPGHCVSMQGALDWT
LRTLRAYRLPEPTRLADRLASRRGEVTVPAACSGQLL
>XCV3201 nudE, ADP compounds hydrolase
MRRMSSRLPIIHKITDLGDGPFRRQQLDLEFSNGQRRIYERQLSQGHGAV
VVVPMLDAQTVLLVREYAAGVHRYELGLVKGRIDAGETPEQAADRELKEE
AGYGARQVQVLRAMTLAPTYMSHQSWLVLARDLYPERLVGDEPEEMDVVP
WPIARLDELMLREDFSEGRSLAALFIAREWLERNP
>XCV0525 nudH, (Di)nucleoside polyphosphate hydrolase
MIDPDGFRPNVGIVLMRQDGQVFWARRVRRDGWQFPQGGMNTDETPVEAM
YRELREETGLLPEHVELLGATPGWLRYRLPSRAVRRNERQVCIGQKQVWF
LLQFTGDESHLKLDHTDTPEFDHWRWVDFWYPVEHVVMFKRGVYARALRH
LAPLAQSLAGPAAVGAMPQRALEAWLPGSSAAGHDSPRKRPRKRSGARAM
RINND
>XCV2984 ogt, 6-O-methylguanine-DNA methyltransferase
MSTLHYDTFPSPIGALSVAADATGVHHILFAQNRYDAIGRARWLHDPDAP
LVREAREQLLDYLHGGRRSFDLPLAPVGTPFQLTVWRTLAQIPFGQTWSY
AQLAQAVGKPAASRAVGAANGRNPLPIVLPCHRVIGANGTLTGFGGGLPT
KQALLQLEGWSPRGAARADDLFAPASAVRTG
>XCV1497 parC, topoisomerase IV subunit A
MTDLTRPTFHGFEQLPLREYAERAYLDYSMYVVLDRALPFLGDGLKPVQR
RIVYAMSELGLNAAAKPKKSARTVGDVIGKYHPHGDSACYEALVLMAQPF
SYRYPLIEGQGNFGSTDDPKSFAAMRYTESKLTPIAEVLLGELGQGTTDW
APNFDGTLEEPTWLPARLPHLLLNGTTGIAVGMATDVPPHNLNEIVSALL
RLLDDPDATVAQLCEHVLGPDYPTTAEIITPAADLRNIYETGHGSVRARA
TYKKEHANIVIDALPYQVSPSKVIEQIAQQMRAKKLPWLEDIRDESDHTS
PVRVVLVPRSNRVDAEQLMGHLFVTTDLERSYRVNLNVIGLDGRPQVKNL
KHLLSEWLSFRSDTVTRRLNHRLQKVERRLHLLEGLLIAFLNLDEVIRIV
RSEDEPKPVLISRFALSEEQAEYILETKLRQLARLEEMKIRGEQEALAKE
RAQIIAILESKTKLKKLIKDELTADAKKFGDARRSPLVQRGAAQAIDETE
MVASEPMTVVLSEKGWVRAAKGHEVDPAGMSYREGDGLLAAVRSRSTHQV
AFLDSDGRAYSTAVHTLPSARGNGEPLTGRFSPASGAAFQVMASADNATR
FVLASSHGYGFVTRFENLTGRNKAGKAMLNLTTGSHVLTPAQVSNPQTDR
IVAVTSAGNLLAVPATDVPELDKGKGNKIIEIPKAKLGTERVVAVVAVAP
GNTLLVRSGARTMSLSFKDLDTYVGARASRGSLLPRGWQKVDGLEVQ
>XCV1748 parE, topoisomerase IV subunit B
MGTLDCETNARVANAARPPTERRSRAKNRLSPHTCASFHVPTRCMNTRYN
AADIEVLSGLDPVKRRPGMYTDTARPNHLAQEVIDNSVDEALAGHAKQVE
VTLYKDGSCEVSDDGRGMPVDIHPEEKIPGVELILTRLHAGGKFSNRNYT
FSGGLHGVGVSVVNALSTKVELFIKREGSEHRMEFRDGNAASKLEVVGTV
GKKNTGTRLRFWADPKYFDTPKFNVRALRHLLRAKAVLCPGLTVKLHDEA
TGEQDSWYFENGLRDYLKGEMAEHELLPADLFVGSLKKDTEIVDWAAAWV
PEGELVQESYVNLIPTAQHGTHVNGLRSGLTDALREFCDFRNLLPRGVKL
APEDVWDRVTFVLSLKMTDPQFSGQTKERLSSRQAAGFIEGAAHDAFSLY
LNQNVEIGEKIAQIAIDRASARLKTEKQIVRKKVTQGPALPGKLADCISQ
DLSRTELFLVEGDSAGGSAKQARDKDFQAILPLRGKILNTWEVASGSVLA
SEEVHNLAIAIGCDPGKDDITGLRYGKVVILADADSDGLHIATLLTALFL
QHFPALVAAGHVFVAMPPLFRVDVGKQVFYALDEEEKTTLLDKIAREKMK
GQISVTRFKGLGEMNPQQLRESTIHPDTRRLVQLTIDDGEQTRSLMDMLL
AKKRASDRKQWLETKGDLASLEV
>XCV4200 polA, DNA-directed DNA polymerase
MSRLVLIDGSSYLYRAFHALPPLTNAQGEPTGALFGVVNMLRATLKERPA
YVAFVVDAPGKTFRDDLYADYKANRPPMPEDLRAQVQPMCDIVHALGIDI
LRIDGVEADDVIGTLALQGAADGLQVTISTGDKDFAQLVRPGIELVNTMS
GSRMDSDAAVIAKFGVRPDQIVDLLALMGDTVDNVPGVEKCGPKTAAKWL
AEYDSLDGVIANADKIKGKIGDNLRAALPRLPLNRELVTIKTDVTLASGP
RALDLREPNAEALAVLYARYGFTQALRELGGAAAQAGLLAEPVALGAAAA
TARTEPGRARGTGFVSGPVNAAVDLDPSLSAPGQYETILTQEQLDSWIAR
LRAAGQFAFDTETDSLDPLQADLIGLSVAAEPGQAAYLPFGHHFPGAPAQ
LDRTQALAQLAPLLTDPAVRKLGQHGKYDLHVMRRHGVALAGYADDTLLE
SFVLNSGSARHDMDSLAKRYLGYDTVKYEDVCGKGAKQIPFAQISLEDAT
RYAAEDADITLRLHRVLGPRLASEPDLERVYRDIEMPLVDVLARIEANGV
CVDAAELRRQSADLSKRMLAAQQKATELAGRSFNLDSPKQLQALLFDELK
LPAVVKTPKGQPSTNEEALEAIADQHELPRVILEYRGLAKLRSTYTDKLP
EMVHPQSGRVHTSYHQAGAATGRLSSSDPNLQNIPIRTEDGRRIRRAFVA
PAGRKLIACDYSQIELRIMAHLSGDPGLVGAFESGADVHRATAAEVFGRT
IDTVSGDERRAAKAINFGLMYGMSAFGLARQLGIGRGEAQDYIALYFSRY
PGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQRAGAERAAIN
APMQGTAADIIKRAMVNVDGWIANHAQRAKMILQVHDELVFEADIDFVDT
LLSEVTTRMAGAAELRVPLVVDSGVGDNWDQAH
>XCV3943 priA, primosomal protein N'
MTSTVATLRVALPVPLPQLFDYLPPTDAPLTDPARVGCRVRVPFGPRELV
GVVVEIGQLPAADGLRPALAWCDQAPLLVDELARSLHWLARYTHAPLGEA
QTSALPGPLRRGEPLADTHAWAWQLTEAGHSGAASLRAGSRPALLATLLL
TGAVGEEQLDPLLPQWRQAARSLAKRHYAERVAVPADSIPPRPGSGPPLN
DEQQAAATAIRAHSGFATYLLDGVTGSGKTEVYLQAIADCLAAGKQALVL
VPEIGLTPQTLGRFRARLGVPVHALHSGLSDGERARVWAAAWRGEAKLIV
GTRSAVFTPLPNAGLIVIDEEHDGSYKQQDGIRYHARDFALVRGKALDVP
VILGSATPSLESLHNAYSGRYQHLRLSRRAGEARPPRVRVLDVRKRPLKD
GLSPEVLAGIGATLARGEQVLVFKNRRGYAPVLLCHDCGWTAACQRCSTP
LHQTPMTVHAGGRRLQCHHCGARQPAPLACPACASLALQPQGIGTERLEE
RLTEAFPDVPVVRIDRSTTQRRDALETQLARLGTEAGILVGTQILAKGHD
LPRLTMVVVVGIDEGLFSADFRAAEKLAQQLIQVAGRAGRADRPGEVWLQ
THHPEHPLLQTLVNGGYHAFADAELQQREAAGFPPFAHLALFRAEAKDVA
AANQFLLAVRGLTSADPGTQSPAFAAVECYGPMPAPMPRRAGFQRTQLLL
SAQQRAALHRLLDTQLPAIYALPQARRVRWSLDVDPIDLY
>XCV4028 radC, DNA repair protein RadC
MHIHDWPTHERPREKLLARGATALSDAELLAIFVGSGLRGQDAVQTARDL
LHRHGPLRLLLDRPAKTLARLPGLGPASACKLAAAMELAQRHLMSALERG
EALSDPPSVGRYFSQRLRARAYEVFAALFLDNRHRAIAFEELFTGTIDGA
DIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEADRAVTKRLLDSLELV
DIRLLDHFVIGDGRPVSFAERGWLE
>XCVd0134 rdgC, recombination associated protein / putative exonuclease
MAFFRNLTLFRFPTATDFSEVDQLLPAVVLKPVGPLEMNSRGFMSPFGRE
QQVTLSHRLGDFLWLTVGGEDKILPAAVVNDALARKISEIEAKEGRKPGG
RERKRIKDDLIHELLPRAFVKSSRTDAVLDLRNGYIAVDTSSRKTAESVM
SQIRGLLGSFPAMPLNAEVAPRGVLTGWIAGEPLPEGLSLGEECEMKDPV
EGGATVRCSAQELRSDEIDRHLDAGKQVTKLAMVLDDHLSFVAGDDLVIR
KLKFLDGALDQLEEADQEGLRAEFDARFALMSGELRRLFSLLETAFKLSA
AEA
>XCV4327 rdgC, recombination associated protein RdgC
MFFRNLTLFRFPTTLDFSEIDTLLPPVQLKPVGPLEMSSRGFISPFGRDE
QEVLSHRLEDFLWLTVGGEDKILPGAVVNDLLERKVAEIEEKEGRRPGGK
ARKRLKDDLIHELLPRAFVKSSRTDAILDLQHGYIAVNSSSRKSGENVMS
EIRGALGSFPALPLNAEVAPRAILTGWIAGEPLPEGLSLGEECEMKDPIE
GGAVVKCQHQELRGDEIDKHLEAGKQVTKLALVLDDNLSFVLGDDLVIRK
LKFLDGALDQLEHSEDDGARAELDARFALMSAEIRRLFLLLETALKLSKA
E
>XCV1773 recA, RecA protein
MDENKKRALSAALSQIEKQFGKGSVMRMGDRVIEAVEVIPTGSLMLDIAL
GIGGLPKGRVVEIYGPESSGKTTLTLQAIAQCQKNGGTAAFIDAEHALDP
IYAAKLGVNVDDLLLSQPDTGEQALEIADMLVRSGSVDIVVVDSVAALTP
KAEIEGEMGDQLPGLQARLMSQALRKLTGNIKRSNTLVVFINQLRMKIGV
MMPGQSPEVTTGGNALKFYASVRLDIRRIGAIKKGDEIIGNQTKIKVVKN
KLAPPFKQVVTEILYGEGISREGELIDMGVEAKLVDKAGAWYSYGDERIG
QGKDNARTYLRDNPQVATRLEAELREKFQPAEAPREAGDDEDKE
>XCV4442 recB, exodeoxyribonuclease V beta chain
MSVSPVTDPYLQLPLHGVRLIEASAGTGKTFTLATLFTRLVVERGLRIGQ
ILAVTFTEAATQELRRRIRERLVLAASLVPEAPSPLAGAASAATESSAIQ
SPDAPSASAGAALGATDLADAPSQPGPLLHEAPDVLLTRAILATHLGGGS
ETPVALRRRLQQAVEEIDLAAVFTIHGFCARVLREHALESGQAFAAPELL
ANDRQLLGEVAADLWRQRAADAVMAEDLIALWSGGPEALASDLRALVRHP
TLLPAVATTTDDAPALLQAAHAAANALAAAFQTHGTAFFDAIMAAIEGGI
LSKVSYKPEWLASLWHWFETFAAAPALNTAPHAKLLKLTAAELAAGTNKK
FVDRTPSSPMSHQIDGYLTALARVEEWRSRRRIALLHALRDDAIARLALL
KRQRRVQTYDDLVDGVAHALQGAQADALVKRLRTQYAIALVDEFQDTDDR
QWSIFSNVFGEGPLARAAGLEPALFLIGDPKQAIYGFRGGDVRTYLAAAV
TAELAPPLSHNFRSRPGVLAAIDALYAQAGYADAFLTDGIAFHPVRAGTK
RVDEDLQRDGVTAPALTLWRAPEPPPPAKGKPKPWSAGRARELATAACVA
AIRGWLAGGRDGTATVCGRPVQAGDIAVLVRSHGEATRIQQALGAVGIPA
VAAGKQSLFATEQALEVLALLQALLDPGDDSRLRAALATVLIGEDAIAIA
ALERDGERHRHWQQQALDWRERWQRGGPLALIGELGATHGQRLLALVDGE
RRLTNYLQLAELLQEADARALGPHGLVDWLSRRIANADDNDEAQQLRLES
DARRVQIVTLHKSKGLEYPLVFLPYIGIGRSDKGAGRHCVVHAPDVGRQL
HWKTERDDPSWSAAEAAWKQEQRAEDARLLYVGLTRAEHALWIASGPFHQ
HERTALSAMLRALDALQGAAGEGTVVVDTSTPPAHLPRLPAPIEAQVPPA
RSAQRHIAPEWWVYSFTQLANADAGAATDPMASATVVGSGGSDEPSGSEA
VAVAVASDAEPFDPRFAGNRFGVVMHDVFERCDFAAWQAWRPSQPAPDGQ
AAPILQALQRGGYAQDDLDDGLRMLTALIGHTLTVALPEGTRLADVPEPQ
RRNEMEFHFAMRPTRVDALLALLHRFGVVGDRQAFGARQRLEGLMTGLID
LTYSVDGRWYVLDYKSNRLPSYDADALARAMAHSEYELQALIYTVALHRW
LRFRLGEAYDYARDFGGVRYLFCRGLDAGRPAEAAGSEAVAETPGHSIAG
QRMSATARDSTGDRPDSAPNAGATTTGDMRAPLGDPAPGIHAWRFEPALV
LAVDALFAGKLADALSNDAPAQGSRNGLEPLSPRERGWGEGTSAPGTPTP
>XCV4443 recC, exodeoxyribonuclease V, gamma chain
MWRAVDRHLPRSAVARCRAALRLSAVTWPPTRRPTTPHTRIRHNAPRMHA
TSAPDFRLYPSNALDTLAALLAQELRRPMPGQPLLQPEVVLIPQVAMRRW
LQSTLAAEHGVAANLEFLTPGEFVARALERNLGAADDDLDMATTQWRLYA
ALQSDLGSDAALAPLAGYLSDGDALKPWALAGELASVFEKYQAWRRDWLL
RWEAGADPDDPQARLWRSIATGRQYRARRIGQYLDRHARADGPLPQGLPP
RVFAFAILNISPDVLRVLATQARVGTLHFYLPTPTQGYWGDLQTLWQRRR
EDGAVQLFAEQVQENPLLQAWGAAGRDFMALVGDYEVVHPLAEIAAYADP
LESGRRTLADGGLGDSLLRRMQSDLFHRRAPAAEAVLPAVNLHDPSLQVH
ACHTRLRELQVLHDQLRALLDDARFDPPLQPREIAVLSPNIDPYVPYLDA
VFGSHGNDDALPYALADASPLASESLAEVFLTLLGLPIARFGLHEILDLL
ASAPIAEAAGLDEAGLERLRSWLHAAGARWGLDAAHRRQHQAPGDDAYTW
RFALDRLLLGHASGADEDIDGVAPWPQLEGSALAALDTLLRLLRVLERHQ
AALAEAMTPVEWRERLLGLLEALIPTMPTAPRAQRALDRLRALIVQFARD
AMRAEYAGKVPAEVVRAHFAAVLGESDTRAPLLTGGISFGRMVPMRLLPF
RVICLLGMNDGDFPRRDPAAGLNRLTAELGTERRRHGDRSTREDDRFLFL
QLFASAQDVFYLSYLGADARDGSVREPSVLVSELLASAAQYHAASNALDT
LVVRHPLQPFAAAAFGALGDESDAGADPRRFSYRRQWRPAVDSLVGQRQP
LAPWVAGALPAEGIALPASMSIDALRRLLTDPAGQFLRHRLGMRLPDPAG
EDADLEPLLAPTRGLDQYGLQQQIFDAALAGDTEHLYARLRARALLPSGP
LGRRQLDERVAQLRPYADAFRQWRGESPAQSRRLQVQIDEIELHGRVPGW
YASGVGRVQVGALSGRSAIRHGLEWLLLRAAGEHAPYVRFFEHDDGLGPH
PIDAQPLSQTQARTALAELLQLYRQGLQMPLAFAPYSSWKYHQAARGGDL
DKAIKEAAGQWQSGFGWSESHSPELRLVTRGRDPFADAQRFAEFAATSHR
VYALLEQGNTGAPLETERVIDSWRHWHGAQEDVE
>XCV4441 recD, exodeoxyribonuclease V alpha chain
MTHPNLLAALNQSGALRTLDLAFAQSLQRLEPDTDPQMLAGAALASLAVT
SGHAGLDPARAAMLLDARDGPPPTFPDPADWQRSLAASRWVDQPQPDAPA
AADCPLVLERGLLYLRRYREYERRLALGLQRIAAQPLPPVDAATLAPLFA
QLFPNAIPTPRTAEPTPLPPGEGARRAGEGTGLPAPIHYQEGTTPPTPSH
PPDRQAQAAALALRRALLLVTGGPGTGKTTTIARLLLLRIAQARASSTPA
PRIALAAPTGRAAERMAESLRAAIARAIADGIQLPAAGSLPAPSGSAGLI
TSTHPTNAAAPASTGAGLELQTHAASEQGGPPSWEALLPSGASTLHRLLG
VIPDSPHFHHNADNPLPFDLIVVDEASMVDLPLMCKLVDAVADGTQLILL
GDADQLPSVEAGDVLAAILQAAGPGDALQPEDAQALQSLLGSAPVERPPA
VTSATRSGGLDGHRVHLLRGYRQAQDFALAPLADAIRAGDADTALALLRS
GELPGVHFHEDGEDPLALGRDALLAHWRALANAQDPAAALRDAGRLRLLT
AVRAGPQGARGLNARIEQLLADTGSGARRLGGASPWFQGRLLLITENSYR
HGLFNGDVGICLRSDAGPSPGQGDASAVTARGHAAPSSRPGHAGDSARHD
APATDRRAQGPLVAWFEGDGDGQVRGFHPAALPAHESAFAMTVHKAQGSE
FDEVWLQLPTRDARVLSRELLYTGITRARRALHLAASEAVMRAALARHAA
RISGLAWRLGAKDDKPPPVPAPTPAPLPQPPPSAPVQGALF
>XCV0003 recF, DNA replication and repair protein RecF
MHVVRLSIHRLRRFHTVELHPSSTLNLLTGDNGAGKTSVLEALHLMAYGR
SFRGRVRDGLIQQGANDLEVFVEWKEGNGAAGERTRRAGLRHRGQEWTGR
LDGEDVAQLGALCAALAVVTFEPGSHVLISGGGEPRRRFLDWGLFHVEPD
FLTMWRRYARALKQRNALLKQGAQPRMLDAWDHELAESGESLTSRRTRYL
ERLQERLVPVADAIAPALGLSALTFAPGWKRHEVSLADALLLARERDRQN
GYTSQGPHRADWVPSFQALPGRDALSRGQAKLTALACLLAQAEDFAYERG
EWPVIALDDLGSELDRHHQGRVLQRLASAPAQVLITATETPPGLADAGAL
LQQFHVEHGHITRQAAAH
>XCV3508 recG, ATP-dependent DNA helicase
MSRTRVVTPSLAVAGQARLSSLPGVGPKVADKFAARGILSVQDLWLHLPL
RYEDRTRLTTIAQLQGGVPAQVEGRVEAVERGFRFRPVLRVAVSDASHGT
LVLRFFHFRAAQVAQFAVGTRLRVFGTPKPGQHGWEIVHPSYRVLAPDED
AGLGDSLDPVYPVLEGVGPATLRKLIGQALERLPPESALELLPPHWLQDE
RLPSLRAALLTMHRPPVGTDPQQLLAGGHPAQQRLAIEELLAHQLSLRRQ
RIALQRLHAPSLPGNGTLVQQLCKALPFQLTGAQQRVFEQIAHDLAHPSP
MLRLVQGDVGSGKTVVAALAAMLAVEQGKQVALAAPTELLAEQHLTNLRG
WLEPLGIRIVWLAGKVTGKARAAVMAEVASGQAQVVVGTHALMQEAVVFH
DLALAIIDEQHRFGVHQRLALRDKGAAAGSVPHQLVMTATPIPRTLAMSA
YADLDVSAIDELPPGRTPVQTIVLSAERRPELVERIRAACAEGRQAYWVC
TLIEESEEPEKGAQGQQGGPPRIEAQAAEVTFEALSAQLPGVRVALVHGR
MKPAEKQKAMLDFKQGRSDLLVATTVIEVGVDVPNASLMIIENAERLGLA
QLHQLRGRVGRGAAASSCVLLYQAPLSMMARQRLETMRQTNDGFVIAEKD
LELRGPGELLGTRQTGLASFRIADLARDAGLLPRVQVLAERLLDEAPEIA
DRVVERWIGGAVRYAAA
>XCV1561 recN, recombination protein N
MRQRIDNVWPRGWQASDSPSAPATLSFPKAFTLDLMLRHLSIKDFAVVRA
TELEFGPGMTVVSGETGAGKSLMVDALGFLSGLRADSGVVRHGAERAELS
AEFQLPAEHPGLRWLADNELDDEAQCQLRRIIRADGGSRAWINGRPVTSS
QLAELASKLVEIHGQHEHQALMARHSQLALLDAYARNSAQREQVRQASQR
WQALLDERDALSAQGDVSDRIGFLEHQLAELEREDLDPAAIAALDVNHRR
QAHATALIGACDSVAQQLNGDDGASALGLLQDSRHDLSRVAEHEPRLGEV
DALLDSAVIQIGEALALLDRVRDDLEADPAQFEAMERRLGRLHDLARKHR
VTPDELAAHRDHLSAEVESLRGADERLQQLDKHIEIATGAWRSAAGVLSD
SRTAAAEALSAATTALIGELGMGGGQFLIQLQPHESPRPDPNGAERVEFL
VAANAGQPPRALRKVASGGELSRISLAIEVAALGLDSVPTMVFDEVDSGI
GGAVADIVGQKLRALGEERQVLCVTHLPQVAAKGHAHYRVSKAPVDGMTQ
SAVELLGPQARQEELARMLGGVEVSKEARAAARKLLQSA
>XCV3255 recQ, DNA helicase
MSSPAHELLSRVFGYDDFRGPQQAIVEHVAAGNDALVLMPTGGGKSLCYQ
VPALLRDGIGIVVSPLIALMQDQVEALRQLGVRAEFLNSTLDAENAQRVE
RALLSGDLDLLYVAPERLLTQRFLSLLERSRIALFAIDEAHCVSQWGHDF
RPEYRQLTVLHERWPHIPRMALTATADPPTQREIAERLDLVDARHFVSSF
DRPNIRYTVVQKDSARKQLQEFLGRHRGSAGIVYAMSRRKVEETAQQLCA
QGFNALPYHAGLPAEVRAENQRRFLREDGIIMAATIAFGMGIDKPDVRFV
AHVDLPKSLEGYYQETGRAGRDGDPAEAWLCYGLGDVVLLKQMIEQGEAA
EERKRLERAKLDHLLGYCESMQCRRQVLLAGFGETYAKPCGNCDNCLTPA
AAWDARVASQKALSCVYRSGQRFGVGHLIDILRGSENERIKQLGHDQLST
YGIGRDLDERTWRGVFRQLVAASLLEVDSEGHGGLRLTDASRQVLKGERQ
VMMRRENPAAGRERSAQRTGLPVQPQDLALFNALRGLRADLAKEQNVPAF
VIFHDSTLRNIAEQRPTSIDALSRVGGIGGGKLARYGAQLIEIVREQG
>XCV1129 recR, recombination protein RecR
MSTLLEQLIEAFRVLPGVGQKSAQRMAYHVLEREREGGRRLAAALGNAVE
KVGHCVQCRDFTESEICTICASSSRDRQQLCVVESPADRLAIEHATGYRG
LYFILQGRLSPLDGIGPRELGLDRLGERLAAGEVTEMIIATNATVEGEAT
AHYLAQLARQHAVRPSRLAQGMPLGGELEYVDRGTLSHAFGTRSEVL
>XCV4383 rep, ATP-dependent DNA helicase
MYGLNPPQSAAVLHCEGPLLVLAGAGSGKTRVIVEKIAHLIAIGRYPAKR
IAAITFTNKSAKEMRERVAKRIRGDGADGLTICTFHALGLKFLQIEHAAA
GLKRGFSIFDSDDAAAQIKDLMHGAKPDAIEDAKNLISRAKNAGLSPEQA
MAAARSTREKEAAGLYERYQARLTTFNAVDFDDLIRLPVQILEANEDIVM
GWRERIGYLLVDECQDTNDAQYRLLKMLAGPRGNFTCVGDDDQSIYAWRG
ANPENLQQMARDYPALEIIKLEQNYRCSNRVLRAANALIAHNPHEHLKTL
WSDQADGERIRVWECRDSEHEAEKVAAEISFLGTAKQVPWSDFCILFRGN
FQSRPLEKALQLLRVPYHLTGGTAFLERQEVKDLLSWLRLIVNPDDDAAF
LRAVQSPKREVGATSLARLAELASAKSVPMSRAAESMGALQHLPPRAANG
LSAFTDILRDMREHSSSMPAGELVRLLADKSGLLNDLRNQSKDETGFQRR
KRNLDELAEWFEGGPRGASASDLAAQLALLSRNDKDDGGNQVRMMTMHAS
KGLEFRYVFIVGCEDGVLPHEVSLEEGNLQEERRLLYVGITRAKEQLWMS
HSKLTRKFGEHVRLKPSRFFDEIPAEELQRDGADPVADAERKKERASAGL
AAIQALFD
>XCV3954 rhlB, ATP-dependent RNA helicase
MSDKPLTDVTFSSFDLHPALIAGLESAGFTRCTPIQALTLPVALPGGDVA
GQAQTGTGKTLAFLVAVMNRLLIRPALADRKPEDPRALILAPTRELAIQI
HKDAVKFGADLGLRFALVYGGVDYDKQRELLQQGVDVIIATPGRLIDYVK
QHKVVSLHACEICVLDEADRMFDLGFIKDIRFLLRRMPERGTRQTLLFSA
TLSHRVLELAYEHMNEPEKLVVETESITAARVRQRIYFPSDEEKQTLLLG
LLSRSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLL
NRFQKGQLEILVATDVAARGLHIDGVKYVYNYDLPFDAEDYVHRIGRTAR
LGEEGDAISFACERYAMSLPDIEAYIEQKIPVEPVTSELLTPLPRAPRVP
VEGEEADDDAGDSVGTIFREAREQRAAEEQRRGGGRSGSGGSRSGSGGGG
GRREGAGADGKPRPRRKPRVEGQAPATAASTEHPVVAAAAGQAPSAGVAD
AERAPRKRRRRRNGRPVEGAEPAVASTPVPAPAAPRKPTQVVAKPVRAAA
KPSGSPSLLSRIGRRLRSLVSGN
>XCV3733 rhlE, ATP-dependent RNA helicase
MSFESLGLAPFLLRALAEQGYETPTPIQQQAIPLVLAGHDLLAGAQTGTG
KTAAFGLPLLQHLGTAPQTVNGPRKPRALILTPTRELATQVHDSLRGYSK
YLRIPSAVIYGGVGMGNQLDALRRGVDLLIACPGRLIDHIERRSVDLSGI
EVLILDEADRMLDMGFLPSIKRILTKLPRQDRQTLLFSATFEENIKQLAL
EFMRNPMQIQVTPSNTVAESITHRVHPVDGARKRDLLLHLLAQDSREQTL
VFARTKHGSDKLALFLEKSGIKTAAIHGNKSQGQRMRALSDFKAGRVTVL
VATDIAARGIDIDQLPKVINYDLPMVAEDYVHRIGRTGRNGSTGEAISLV
AQDEAKLLRQIVRMLGRDVEIRDVPGYEPQTPIRWGNSAPGRAEQPGGER
APRKSHARRPHGDAPRQAHAHAGPKKPGGQRSGGPRQANAGAGAGRRDGG
RGGNGRPANRGA
>XCV0470 rhlE, ATP-dependent RNA helicase
MRGQRTCTSFRHARRRQCADNRAMSLKADLLSLQLQPVFESALARAGVHA
LTPIQVAMIPPMLAARDLIATAQTGSGKTLAYALPLLLQRLQAPEQAPRV
LGGLILVPTRELVAQVAQTLLSLAAALPRRLKIVAATGGEAINPQLMALR
GGADIVIATPGRLLDLVTHNALRLSQVSTLVLDEADRLLDLGFGAELDRI
LALLPAQRQSVLVSATFPAAIASLAKRRLRDPLRITHDAMPEQAPSITQR
AIAVDAGQRTQLLRHLLLEHGWPQLLVFVASRHGADKVAEKLSKTGIAAL
PLHGELSQGRRERTLRAFKQADVQVLVATDLAGRGIDIDALPAVLNYDLP
RSTVDYTHRIGRTARAGASGVAISFVTADSAQQWRLIEKRQGLRVPTSVI
EGFEPTPVQAPAPDHAPGAAVRAADDNGGIKGKRPSKKDKLRAAAQAQAG
KPG
>XCV1089 rnhA, ribonuclease H
MKFIEVHTDGSCLGNPGPGGWAALLRYNGREKELAGGEAVSTNNRMELMA
AIMALETLTEPCQIVLHTDSQYVRQGITEWMPGWVRRNWKTAGGDPVKNR
ELWERLHAATQRHRIDWRWVKGHNGDPDNERVDVLARNQAIAQRDGLATS
>XCV1464 rnhB, ribonuclease HII
MRRAVEGVAHVAGFARIDGNRVPKGLPCPAEALIGGDALDRAIMAASIVA
KVTRDRLMHELHTRHPEYRFDQHKGYSTPVHLAALQTHGPCPQHRRSFAP
VRLALEGRNPGPGTRDPEQLQVGRLVVPL
>XCV1611 rnt, ribonuclease T
MRMNEPVDAQPAPSFLPMSRRFRGYLPVVVDVETGGFDWNKHALLEIACV
PIEMDTDGRFFPGETASAHLVPAPGLEIDPKSLEITGIVLDHPFRFAKQE
KDALDHVFAPVRAAVKKYGCQRAILVGHNAHFDLNFLNAAVARVGHKRNP
FHPFSVFDTVTLAGVAYGQTVLARAAQAAGLDWNAADAHSAVYDTEQTAR
LFCKIANAWPGPV
>XCV1319 rsbR, putative sigma-B regulator
MVALQQRSIDAIGGQEHALLAAWLESSLGNDARLSRQEFEAQAGEFLRLL
VASLKHDGSSLDSAEWSEVRRFLEHLSRDRATRGFDSQETANFIFSLKRV
LFALVQREYASTPEELGQQLWALSELLDRLGLYTVKVFQKTREDIIVRQQ
EEMLELSTPVVKLWDGVLALPMIGTLDSQRTQVVMESLLQRIVDTGSEIA
IIDITGVPTVDTLVAQHLLKTVTAIRLMGADAIISGVRPQIAQTIVHLGL
DLQGIVTKANLADALALALKRTGVTVSKAD
>XCV3280 ruvA, Holliday junction DNA helicase RuvA
MIGRLRGILAYKQPPWLVIDVGGVGYELEAPMSTFYDLPDVGRDVILFTH
YAQKEDSVALYGFLREGERRLFRDVQKVTGIGAKIALAVLSGVSVDEFAR
LITSGDITALTRIPGIGKKTAERMVVELRDRAADFSSGAPITGQLGPDAV
SEATVALQQLGYKPAEAARMARDAGAEGDEVATVIRKALQAALR
>XCV3277 ruvB, Holliday junction DNA helicase RuvB
MTEQRIIASSSTREDDAADASIRPKRLADYLGQQPVREQMEIYIQAAKAR
GEAMDHVLIFGPPGLGKTTLSHVIANELGVSLRVTSGPVIEKAGDLAALL
TNLQPHDVLFIDEIHRLSPVVEEVLYPAMEDFQIDIMIGDGPAARSIKID
LPPFTLIGATTRAGLLTAPLRDRFGIVQRLEFYSPQELTRIVSRSAAILG
IDCTPEGAAEIARRARGTPRIANRLLRRVRDYAQVKAAGHIDLPVAQAAM
QMLKVDPEGFDELDRRMLRTIVEHFDGGPVGVESLAASLSEERGTLEDVI
EPYLIQQGFLIRTARGRMVTPKAYLHLGLKVPRERAPGIGEPGDLF
>XCV3281 ruvC, holliday junction resolvase
MTRILGIDPGSQRTGIGIIDIDEDGRSRHVHHAPLMLLGEGDFSQRLKRL
LQGLGELIETYRPDEVAIERVFMGKSAASALKLGHARGAAICAVVMRDLP
VHEYAATEVKLALVGKGGADKVQVQHMVGIMLNLKGKLQPDAADALAVAI
THAHVRATAQRLGVNTQQAWSRKK
>XCV3062 ruvX, putative Hollyday junction resolvase
MPEAGAIRPDGTVLGFDVGSRRIGVAVGTALGAGARAVAVINVHANGPDW
VALDRVYKQWRPDGLVVGDPLTLDDKDQPARKRAHAFGRQLRERYALPVV
LIDERSSSVEAAQRFARERADGRKRRRDAEALDAMAAAVIVERWLAAPDQ
ATSLP
>XCV1640 sbcB, exodeoxyribonuclease I
MPDSFLFYDLETFGQDPRRTRIAQFAAVRTDAQLRVIEEPISFFVQPADD
LLPSPYATMVTGITPQHALREGVTEAEAFARIAEQMGRPQTCTLGYNSIR
FDDEFIRCGLFRNFYDPYEREWRGGNSRWDLLDVLRLVHALRPDGIVWPQ
REDGATSFKLEHLADANDVREGDAHEALSDVYATIGMARKFQQHQPKLWD
YALRLRDKRFAATLLDVIAMQPVLHISQRYPASRLCAAAVLPLTRHPRID
SRVIVFDLEGDPEVLLRLSPDDIADRLYIRAADLPEGEQRIPLKEVHLNK
SPALVAWQHLRAADFQRLGVDHDAVVAKAARLRALGPELAEKVRQVYGSE
RAAVAAVNDADASLYDGFLAEGDKRLLAQVRASAPDELGALEARFRDPRL
IELLFRYRARNWPQTLSFEEQERWNVYRRQRLLEDRGLGEVTLEQYHAQI
ADLRRTHSDDATKQALLDQLAAWGSDLQRTL
>XCVd0129 ssb, Single-stranded DNA-binding protein
MPRKSECRVDCMGFVANEPQLRQANGTPVVNLVVIENEYWKDAEGTRKER
SHAHSIAFWGPYAETVSKLVQKGSYVRVKGNLRYKPIEGQQYDKAAEIRG
DDFSLLDDPRERDESPD
>XCV3064 tag, DNA-3-methyladenine glycosylase I
MSGYCSIAPGHPVHGHYHDHEYGFPQRDERELFERLVLEINQAGLSWQTI
LRKRVNFQRAYDGFDVDAVAAYGDQDISRLMGDAGIIRNRLKVLAAIHNA
QVIQALRATHGSFAQWLDAHHPLDKPAWVKLFKKTFRFTGGEITGEFLMS
LGYLPGAHHARCPVFAQIRALAPPWLQAQTPAKTRTVQRG
>XCVd0097 tnpA, Tn5044 transposase
MASIERTAYPQFKRNPVVRELVAAYTPTDAEVAFVAEYTRQPAHRLTLTI
LLKTFQRLGYFPVLDEVPPAVVRHIRSALKLRVQVKPANLANASRYRYYR
RIRQFLQVRAYSDGGLKIAARAVYEAAAVMDNPADLINVAIEQLVRDRVE
LPAFSTLDRLTRRIRSLVNGHYFAQIEARLTIDEKQRLEGLLHVEQGRQK
SPLHAIKRLPKRSSLQHFQELIDHIAELGELVGSEVHLAGIREVKRKHFA
AEARALDASELRKFRPGKRYAVLVCLIHRARVQTRDDLAEMFIKRMGNIH
NRGREELERLRARYREKTEAIVATMSDVVRVLDHHRGDTEAGREIRRLVN
AHGGVQTLQADCNAIAAHSGDNHLPLLWPFYKSHRSTILRMVRRLDLAST
TEDRSLIDAIELILTQERSRSHWLDEAVDLAFTTQLWRKTIVHRTEVGGE
ERIHRRLFEVCVFSSLANELKSGDVAVRGSETYADYREQLLPWEQCEPLL
EDYCKQVGLPATAVGFVNALQSRLTQVAELTDQGYLENGQVVIGEDGIPV
LKRSKAKEMSCGARALETAVLDRMRERSVIEILCDVAHWTRWPRHFGPLS
GSDAKIEQPTERYVLTAFTYGCNLGPAQAARHLRGAVSAHMLSFVNRRHV
DANKLAAACRDIINSYAGLQLPKCWGDGKSAAADGTKYDLYDQNLLASYH
IRYGGYGGIAYHHVSDTYVALFSHFIPCGVWEAVYIIDGLLKNTSDIQPD
TVHADTQGQSLPVFGLSHLLGIQLMPRIRNWCEYKFFRPDEDIRYEYIDA
LFRDTVDWDLIETHWKDLMQVVLSIKTGKIAASTLMRKLGNYSRKNRLYQ
AFKALGSAVRTLFLLQYISNRELREQITASTNKVEAYNGFAKYFFFGGEG
VIADNDPVEQEKAVQYNDLVSNAVIFYNVVEQTRIMKSLMRQGWKITRED
VAFLSPYVTSHVKRFGDYLIDVEEVPEPYETELALAG
>XCVb0015 tnpA, Tn5045 transposase
MPVSFLSTTQRERYGRYPDTLSSEELARYFHLDDDDREWIATKRRDSSRL
GYALQLTTARFLGTFLEDPTAVPSPVLHTLSSQLGIADPSDCVIDYRTTR
QRWQHTSEIRTRYGYREFTGTGVQFRLGRWLCALCWTGTDRPSALFDYAN
GWLVGHKVLLPGVTLLERFIAEIRSRMESRLWRLLVHGVTPEQRQRLDDL
LKLVEGSRQSWLDRLRKGPVRVSAPALVAALLRIETVRGLGIKLPGTHVP
PSRIAALARFASTAKVSAVARLPEVRRIATLVAFVHCLEASAQDDAIDVL
DLLLRELFTKAEKEDRKVRQRSLKDLDRAASTLAEACRMLLDPALPDGEL
RERVYAAIGHDELAQALNEVRGLVRPPNDVFYTELEARKATVSRFLPALL
RVIRFDANPAAQPLAQALQWLHEKPDHDPPTAIVGKAWQRHVVQDDGRIN
ATAYSFCALDKLRSAIRRRDVFISPSWRYADPRAGLLAGAEWEASRPIVC
RSLSLSAQPEATLSELTRELDETYRRVAARLPQNDAVRFENVGDKTELVL
SPLEALEEPPSLIALRNEIKARMPRVDLPEILLEVAGRTGCMEAFTHLTE
RTARAADLTTSLCAVLMAEACNTGPEPLVRPDTPALKRDRLMWVDQNYVR
DDTLTACNAVLVAAQSRIALARTWGGGDVASADGMRFVVPVRTIHAGPNP
KYFNRGRGVTWYNLLSDQRTGLNAITVPGTLRDSLILLAVVLEQQTELQP
TQIMTDTGAYSDLVFGLFRLSNYRFCPRLADVGGTRFWRVDPDADYGDLN
ALARQRVNLDRITPHWDDVLRLVGSLKLGLVPAMGIMRTLQVDERPTSLA
QAIAEIGRIDKTIHTLNFIDDEARRRATLLQLNLGEGRHSLAREVFHGKR
GELFQRYREGQEDQLSALGLVVNMIVLWNTLYMDAVLTQLRSEGYPVKPE
DEARLSPFGHEHINMLGRYSFSVPEAVARGELRPLTKPNDP
>XCVd0112 tnpA, Tn5045 transposase
MPVSFLSTTQRERYGRYPDTLSSEELARYFHLDDDDREWIATKRRDSSRL
GYALQLTTARFLGTFLEDPTAVPSPVLHTLSSQLGIADPSDCVIDYRTTR
QRWQHTSEIRTRYGYREFTGTGVQFRLGRWLCALCWTGTDRPSALFDYAN
GWLVGHKVLLPGVTLLERFIAEIRSRMESRLWRLLVHGVTPEQRQRLDDL
LKLVEGSRQSWLDRLRKGPVRVSAPALVAALLRIETVRGLGIKLPGTHVP
PSRIAALARFASTAKVSAVARLPEVRRIATLVAFVHCLEASAQDDAIDVL
DLLLRELFTKAEKEDRKVRQRSLKDLDRAASTLAEACRMLLDPALPDGEL
RERVYAAIGHDELAQALNEVRGLVRPPNDVFYTELEARKATVSRFLPALL
RVIRFDANPAAQPLAQALQWLHEKPDHDPPTAIVGKAWQRHVVQDDGRIN
ATAYSFCALDKLRSAIRRRDVFISPSWRYADPRAGLLAGAEWEASRPIVC
RSLSLSAQPEATLSELTRELDETYRRVAARLPQNDAVRFENVGDKTELVL
SPLEALEEPPSLIALRNEIKARMPRVDLPEILLEVAGRTGCMEAFTHLTE
RTARAADLTTSLCAVLMAEACNTGPEPLVRPDTPALKRDRLMWVDQNYVR
DDTLTACNAVLVAAQSRIALARTWGGGDVASADGMRFVVPVRTIHAGPNP
KYFNRGRGVTWYNLLSDQRTGLNAITVPGTLRDSLILLAVVLEQQTELQP
TQIMTDTGAYSDLVFGLFRLSNYRFCPRLADVGGTRFWRVDPDADYGDLN
ALARQRVNLDRITPHWDDVLRLVGSLKLGLVPAMGIMRTLQVDERPTSLA
QAIAEIGRIDKTIHTLNFIDDEARRRATLLQLNLGEGRHSLAREVFHGKR
GELFQRYREGQEDQLSALGLVVNMIVLWNTLYMDAVLTQLRSEGYPVKPE
DEARLSPFGHEHINMLGRYSFSVPEAVARGELRPLTKPNDP
>XCVb0018 tnpR, Tn5045 resolvase
MKIGYARVSTREQNPALQVDSLKAAGCERIYQDVASGAKTARPALDELLG
QLRGGDVLVIWKLDRMGRSLKHLVELVGSLMERKVGLLSLNDPIDTTSAQ
GRFVFNLFATLAEFERELIRERTQAGLTAARARGRVGGRPKGLSPQAEAT
ALAAETLYRERKLSVAAIAQKLHLSKSTLYSYLRHRGVEIGPYKQSAQSP
INVSVVESGNADQPKVATILLTLRIENNSKFVRGKKRSIEHVEFFDLAQY
DATRRPNGEYELKVPYDTDEELDEAVNDLLTDIACGADDRHCFSESHARM
EGTDRHW
>XCVd0109 tnpR, Tn5045 resolvase
MKIGYARVSTREQNPALQVDSLKAAGCERIYQDVASGAKTARPALDELLG
QLRGGDVLVIWKLDRMGRSLKHLVELVGSLMERKVGLLSLNDPIDTTSAQ
GRFVFNLFATLAEFERELIRERTQAGLTAARARGRVGGRPKGLSPQAEAT
ALAAETLYRERKLSVAAIAQKLHLSKSTLYSYLRHRGVEIGPYKQSAQSP
INVSVVESGNADQPKVATILLTLRIENNSKFVRGKKRSIEHVEFFDLAQY
DATRRPNGEYELKVPYDTDEELDEAVNDLLTDIACGADDRHCFSESHARM
EGTDRHW
>XCVc0008 tnpR, Resolvase
MTTFVRAYLRASTDEQDAQRARSGLDQFARDRGVRICNYYAENASGARLD
RAELFRLLADSRPHDVLLVEDVDRLSRLGRAEWEKLKTLIRERSVRVVAV
NVPTTWQHLAPLQNEFDARMFGAINDMLLDMLAAIARRDYEQRRQRQAQG
IAKAKVAGKYRGRQIDRARYGAINRLLASGSSWSVVQKTVGCSRSTISQA
VKHAKLSASAPSTELMAAASVAVILWFHVENGSKFTRGKKRVREDIDYLI
ATSHKSTKLSDTEYRLVIRYADDADLKQQINDLLHEILHLADLRNCVVDD
MSVKNEATGSFWDECDGGWK
>XCV3932 topA, DNA topoisomerase I
MPKHLLIVESPAKAKTINKYLGKDFTVLASYGHVRDLVPKEGAVDPDNGF
AMRYDLIEKNEKHVEAIARAAKSADDIFLATDPDREGEAISWHIAEILKE
RGLLKDKPMQRVVFTEITPRAIKEAMAKPRMIAGDLVDAQQARRALDYLV
GFNLSPVLWRKVQRGLSAGRVQSPALRMIVEREEEIEAFIPREYWSIDAH
CRHPSQAFNARLIKLDGQKFEQFTVTDGDTAEAARLRIQQAAQGVLHVTD
VASKERKRRPAPPFTTSTLQQEASRKLGFTTRKTMQVAQKLYEGVALGDE
GSVGLISYMRTDSVNLSQDALAEIRDVIARDFGTASLPDQPNAYTTKSKN
AQEAHEAVRPTSALRTPAQVARFLSEDERRLYELIWRRAVACQMIPATLN
TVSVDLSAGSEHVFRASGTTVVVPGFLAVYEEGKDTKSSEDEDEGRKLPL
MKAGDNVPLDRIVTDQHFTQPPPRFTEAALVKALEEYGIGRPSTYASIIQ
TLQFRKYVEMEGRSFRPTDVGRAVSKFLSGHFTRYVDYDFTANLEDDLDA
VSRGEAEWIPLMEKFWGPFKELVEDKKDSLDKTDAGSVRVLGTDPKSGKE
VSARIGRFGPMVQIGTVEDEDKPTFASLRPGQSIYSISLEDALELFKMPR
LLGQDQDQDVSVGIGRFGPFARRGSTYASLKKEDDPYTIDLARAVFLIEE
KEEIARNRVIKEFDGSDIQVLNGRFGPYISDGKLNGKIPKDREPASLTFE
EVQQLLADTGKPVRKGFGAKKATLKKNTVKDSAPKKPAVKKTATKTAASK
TAVKKAPAKKTAAKTAAKRVVKKTVSKAAG
>XCV2287 topB, DNA topoisomerase III
MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAAPE
AYDEQLKRWSIEQLPIIPQRWQVEVKPKTATQFKVVKALLAKATQLVIAT
DADREGELIAREIIDLCGYRGPIERLWLSALNDASIRAALGKLRPSAETL
PMYYSALARSRADWLVGMNLSRLFTVLGRQAGYDGVLSVGRVQTPTLKLV
VDRDREIAAFVSVPYWAIDVYLTTSGQAFTAQWISPDTCTDDSGRCLQQP
VAQQAAQQIRATGSAQVVSVETERVREGPPLPFDLGTLQELCSKQLGLDV
QETLDIAQALYETHKATTYPRSDSGYLPESMFAEVPIVLDSLLKTDFSLR
PIIDQLDRTQRSRAWNDAKVSAHHGIIPTLEPANLSAMSEKELAVYKLIR
AHYLAQFLPHHEFDRTVANLSCGQQTLTATGKQVVVKGWRLVLAEPQPEE
DSDTAARSQVLPALREGVSCQVADVDLKALKTQPSRPYTQGELVKSMKGV
AKLVSDPRLKQKLKDTVGIGTEATRANIISGLIARGYLMKKGRAIRASDA
AFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAAWISQLI
TQYASASLSIKVPHGPACPQCGAPTHQRSGKSGPFWSCSRYPDCKGTLPV
ESGTSKRVASRSRRGGRKDS
>XCV2406 topB2, DNA topoisomerase III
MRLFLCEKPSQGKDIGRILGATQRGEGCLSGSGVTVTWCIGHLVEAAAPE
VYDAALKRWSLEQLPIVPQQWRVEVKPKTATQFKVVKALLAKATHLVIAT
DADREGELIAREIIDLCGYRGPIERLWLSALNDASIRTALGKLRPSSDTL
PMYYSALARSRADWLVGMNLSRLFTVLGRQAGYDGVLSVGRVQTPTLKLV
VDRDREIAAFKSVPFWAIDVSLSAGGQAFSAQWVPPDGCTDDAGRCLQQP
IAQQAAQQIRAASSAQVVSVETERVREGPPLLFDLGTLQEVCSKQLGLDV
QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR
PIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPANLSAMSEKELAVYWLIR
AHYLAQFLPHHEFDRTIAELSCGQQKLVATGKQVAAQGWHLVLAEPQADE
DGETTARSQVLPALREGLACQVAEAEVKALKTLPPKPYTQGELVKSMKGV
ARFVTDPRLKQKLKDTTGIGTEATRANIITGLLTRGYLVKKGRSIRASDA
AFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAAWISQLI
VQYGSTSLSIKVPQGPACPQCGAPTRQRTGKTGPFWSCSRYPDCKGTLPV
DSGTSKRGASRPRSSGRKGS
>XCVd0152 traE, DNA topoisomerase TraE
MPEFKLYVAEKPSVGKALAGHLAKSAPAVGRSGSHIEGSNWAVCWLRGHV
YQLAEPDYYIERTYPEAKRGANGRFPWLFDHLPLLPANDEWRLVPVSDKA
EMIDAVRKLLTRATVVVHAGDIDREGQLLVDEVLEDLRCRVPVKRVLPKA
IDDVSVQRVLADERDNRDFARMRDAAIARGRADWLVGMNYSRCVTLQARE
AGSTGHVSIGRVQTPVLGLIASRELEIRNFKPVDYLVLTAMIAVQAGKFR
AKWRPRNGQPGIDENGRLLDAAVAAMVHQQVAGKTGRIAEYRDEQKNENA
PLPFSLDELQRLASRRYGMGLEQTLKVVQGLYDSKLVTYPRTDCAYLPMS
QHAEAAEIVQAVREGFRGTDLPAQLSQLDIGRKSRAFDDKRVTAHHGIVP
TPKAANLEALSREERLIYEDIARRYLAQFMPPHTYRKVSVRAEVANHDFI
ASGRTTLKPGWKELYGKAEQAADDDAAPQDKGDDVNLPAMRQDEAARCEG
LDRENKKTEPPSRFTDDTLLEAMVNIHKYVTTPQVKAHFVAMLKKSEAGA
DDQAQGCGIGTPATRHTFAPKLIEIGVVEHIAGKKKAKFFAPTAAGLALY
EALPRSLTVPDATAVWDMAFAKIEAGEITLEQFMAFQARQINAMLAEIRQ
LRIVLPDLGPRRVPPTKTAGKRKTASKGGKKANGGSGAPCEKCAKGTMQL
RNSSRGPFYGCSNFPVCKHTAPADSAAA
>XCV3950 ung, uracil-DNA glycosylase
MTEGEGRIQLEPSWKARVGDWLLRPQMQELSAFLRQRKAAGARVFPPGPQ
IFAAFDATPFEQVKVVILGQDPYHGEGQAHGLCFSVLPGVPVPPSLLNIY
KEIQDDLGIARPDHGYLMPWARQGVLLLNAVLTVEQGRAGAHQNKGWEGF
TDHVVDTLNREREGLVFLLWGSYAQSKGKVIDQARHRVLKAPHPSPLSAH
RGFLGCRHFSKTNDHLRRRGLSPIDWSLPPRSALDTTSTGA
>XCV2812 uvrB, excinuclease ABC subunit B
MRSCQGSTDAGLRKFVQPPPEIRSMTDRFQLVSPYSPAGDQPAAIDKLVA
NFEAGLAKQTLLGVTGSGKTYTIANVVQQVQKPTLVMAPNKTLAAQLYGE
FKSFFPHNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSINEHIEQMRLSA
TKTLLSRRDSLVVATVSAIYGLGAPEDYLSLRLILSVGEHIDQRQLIRHL
TDLQYTRNEFELTRGAFRVRGEVLDVFPAESDTEALRIELFDGDIEQLTL
FDPLTGETLRKLQRYTVYPKTHYATTRERTLSAVDTIKEELKERLEQLYA
QNKLVEAQRLAQRTQFDLEMMAEVGFCNGIENYSRHLTGKAPGEPPPTLF
DYLPPDALLVIDESHVTIPQIGAMYKGDRSRKETLVEFGFRLPSALDNRP
LRFEEWEARSPRSIYVSATPGPYEVRESAGEVTELVVRPTGLIDPVVEIR
PVGTQVDDLMSEVHERIKLGDRVLVTTLTKRMAENLTEYLGEHGIRVRYL
HSDIDTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKE
GFLRSTGSLIQTIGRAARNLRGKAILYADKITRSMQAAIDETDRRREKQV
EYNLEHGITPKSVERPIADIMEGARDDAAEKKSGKGRSKSRQVAEETPDY
RAMKPAEIAGKLKSLEQKMYQHAKDLEFEAAAQIRDQIQKLKAASLG
>XCV2259 uvrC, excinuclease ABC subunit C
MSVRPHNDFDGKAFAAQLSTAPGVYRMYAGDDTLLYVGKAGALRKRVGSY
FNGTPKNARLTSMLSQVARMDVTVTRSEAEALLLENQLIKSLSPRYNVSL
RDDKSYPYVLLTREQWPRIALHRGPRAVQGRYFGPYTGVTGVRETLSLMH
KLFKLRSCEDSVFRNRSRPCLQYQIGRCSGPCVDLVAAPDYAESVRRATM
FLEGKSDQLGEEIMHSMQQASEALEFERAARLRDLLSSLRSMQNRQYVDG
RAADLDVLACATQSSQACVLLLSFRDGRNLGTRSFFPKTNGEDSADEILG
AFVSQYYAEHSPPREILLDREIPEAELIEAALSTAAEHKVALKWNVRGER
AGYLLLATRNAQLTLVTELTSQSAQHARSEALREMLGLAEPVKRVECFDI
SHTMGEATVASCVVFDASGPVRGQYRRFNISGITPGDDYAAMRQAIERRF
RRAVEENGVLPDVLLIDGGAGQLAQAQAALADLGVENVLLVGVAKGEERR
AGHEALIMADGRELRPGAASPALQFIQQVRDEAHRFAITGHRGRRHKARM
TSKLEDIPGIGPRRRASLLKHFGGLVGLKAAGEAEIARVEGVNAALAARI
YANLHGLALPDAAGEASPQ
>XCV4248 uvrD, DNA helicase II
MLDHLNPAQREAVSAPPGHYLVLAGAGSGKTRVLIHRIAWLNEVQGVPNH
GIFAVTFTNKAAGEMRHRTDLQLRNGSRGMWIGTFHGLAHRLLRLHWQDA
RLPEGFQVMDSDDQLRLVKRVVQALELDESKYPPKQMSWWINEQKDEGRR
PQHIQPEPNDDWTEVRRQVYAAYQERCDRSGLLDFAELLLRAHELLRDTP
ALLAHYRARFREILVDEFQDTNAIQYAFVRVLAGESGNVFVVGDDDQAIY
GWRGAKVENVQRFLKDFPGAQTVRLEQNYRSSANILGAANAVIAHNPDRI
GKQLWTDSGDGDPIDLYAAYNEVDEARYVVERARQWVRDGGSYGEVAVLY
RSNAQSRALEEALISEQLPYRVYGGMRFFERAEIKDALAYLRLLTNRSDD
AAFERAVNTPTRGIGDRTLDEVRRLARASALSLWEAAMLCTQQNTLAARA
RNALASFLSLIGQLHAETGQMELAERIDHVLMRSGLREHWAKESRGGLDS
ESRTENLDELVSVASRFTRPDDEDSQGMTELVAFLAYASLEAGEGQAQAG
EEGVQLMTLHSAKGLEFPIVFLVGLEDGLFPSARSLEESGRLEEERRLAY
VGITRARQKLVLCYAESRRIHGQDNYNVPSRFLREIPRDLLNEVRPKVQV
SRTASLGAARGGPVHGIVETAPIKLGANVEHPKFGGGVVVDYEGAGAHAR
VQVQFDEVGAKWLVMAYANLTVV
>XCV3720 wxcB, putative protein kinase
MTHSVSPGNSSIADLVAALPEKYQPIFGHPEISDGSSRGCEDRLKVILDV
VDHLRMALGRPIRVLDLGCAQGYFSLNLAARGAIVHGADFLDRNVAVCRA
LAEEQGFVAATFECARIEDIVGGLEVGRYDLVLGLSVFHHLIHEHGLEPI
VGLIGQIDACIAVGIYELAVREEPLYWGASQPGDPAQLLQRYAFLRVLAH
QGTHLSGIARPLYFASSRYWLLGNDFREFLSWRTESHAHAMNSHAGTRRY
YFADGVILKQMSLVETSRKKINLAEYENEVSFLRDPPPGVAVPALMHNLE
DSRDVWILREQLPGRLLSEMIQDKAPYSYEEIADSIIAQLVALEAVGLYH
NDLRCWNLLVNDNGTATFIDYGAVSTSAVDCVWPDDLLLSLLITLRELVQ
GQIAPPLPVRRPLLDISMLPARYRVAFYTIFNRPSGEWTFRALREAIGQE
DGEAEGAGWVWLLRKQERALLIYEQAIRAAEARSAEVQTKLNESLSNAHH
WYLRANEREEAIDKLNSEINGLKDTIGELHHLQLSGTSNIHDLRRRLETS
GASFTVVREQLDELRMQLDSSLQNAHHWCLRASTAEQNLHDIQTSASWRL
TRPLRGMARLVRSPRASLKRILLALVRRVLKRPALARALNNWLRMAPSVH
ARIRGAVAADMGIDRVIQPVMEDRPRPDQVVDVTVLAEPVAAARLSARGH
QIYERMLAIRNGESA
>XCV0691 xerC, Site-specific recombinase
MSSVDEFLTYLQVERQVSAHTLDAYRRDLAALVVWAAEQATEAGVQDAAV
PGETAQLDSAHLRQFVAAEHRRGLSAKSLQRRLSACRSYYAWLLKHGRIS
ASPAAALRAPKAPRKLPQVLDADEAVRLVEVPTDAPLGLRDRALLEVFYS
SGLRLSELCALRWRDLDLDSGLVMVLGKGSKQRLVPVGSHAIAALREWRR
DSGASADSHVFPGRAGGAISQRAVQIRIKQLAVRQGMFKDVHPHMLRHSF
ASHILESSGDLRGVQELLGHSDIATTQIYTHLDFQHLAKVYDAAHPRARR
KKAAE
>XCV3676 xerD, integrase-recombinase XerD
MSASSPAERRQLARQLPPVQAADASVIERFLDRFWAEQGVARQTLESYRR
DLEGLARWRDGAHGGLLGIDRAALFDYLRWRTQANYSPRSTARLLSTLRA
FYGLCLRDGVRSDDPTTLIDPPQLPRSLPKALTESQIEALLAAPDVDTPA
GLRNRAMLELMYAAGLRVSELVNLPAVGVNLRQGVLRVTGKGSKDRLVPL
GEESQHWLERYLREARPLLAANKPVAAVDGQVPLFIDAARRPLSRQQFWA
LVKRYAAVAGIDPDTVSPHGLRHSFATHLLNHGADLRALQMLLGHSSLST
TQIYTLVARQHLQKLHASHHPRG
>XCV2607 xseA, exodeoxyribonuclease VII large subunit
MADRNDQILTPSQLNSLARDLLEGSFPLVWVEAELSSVTRPASGHLYFTL
KDARAQIRCAMFKPKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDH
MEEAGEGALRRAFDELRARLAAEGLFDAERKQALPAHVQRLAVITSPSGA
AVRDVLSVLARRFPLLEVDLLPSLVQGDSAAAQITSLLQRADASGRYDVI
LITRGGGSLEDLWAFNDERLARAIAAAQTPVVSAVGHETDFSLSDFVADV
RAPTPSVAAELLVPDQRELVARVRRAQARMTQLQQHALGNAMQRADRLAL
RLRAQSPQARLQLLHRRQQDAGRQLRARMMQVLERLQARVQQGQAQLQAH
NPQRQLAGLQQRLRALHPQAAMQRRLQHDQLQLRSIARSLEAVSPLATVA
RGYAIVTRPADGSVVRSAAEVVTGERLRAQLADGSIQVRVESGES
>XCV2915 xseB, exodeoxyribonuclease VII small subunit
MAKKSLNETSPVARFEQSLEELEQLVQKMEVGDLSLEQSLTAYERGIGLY
RDCQQTLEQAELRVRLLTDPARPELAEAFEPPSLDG
>XCV2081 xthA1, exodeoxyribonuclease III
MSGTLRKIATFNVNGIASRLPHLLEWLQREQPDIVGLQELKSTQAAFPEQ
AIRDAGYGVIWQGEKSWNGVALLARGTEPVEIRRGLPWDPRDTQSRYLEA
AIHGVVVACLYLPNGNPQPGPKFDYKLAWFERLIRHAKTLVDLPHPVALI
GDFNVVPTDADIYDPKGWRKDALLQPESREAYQTLLAQGWTDSLLAIHGH
TPIYTFWDYFRQHFARDRGLRIDHLLLNRTLAPDLQDAGVDKWVRALEKA
SDHAPTWISVRVPDAPAEAAADATSAAKVRKPGTAKKAAVPKAAAKKTPS
VIAKRAAKKIAAKRATAASAKPHKSAKRTAD
>XCV4270 xthA2, exodeoxyribonuclease III
MVRAMKIASWNVNSLNVRLPHLQQWLAAFAPDVVGIQETKLEDHKFPDAA
LAALGYRSVFCGQKTYNGVAILSRSPAVDVQMGIPGLDDVQQRVIAATVD
GVRIINLYVVNGQDVGTDKYAYKLRWLAAAHDWIAQELQRYPQLVVLGDF
NIAPDARDVHDATVWNEHHILTSTDERAALDKLLALGLHDAFRLHNQDAE
HFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGIDREPRTWERPSD
HAPAWVRLAEVGA
>XCV3239 yoaA, ATP-dependent helicase
MSQLATASIEALSEGGALARQLDAFAPRAAQLRLTGAIAEAFEQRDVLLA
EAGTGTGKTYAYLVPALLSGLKTIVSTGTRALQDQLFHRDLPRVRAALGV
GLRSALLKGRANYLCKYRTQQARGEPRFAAPEQVSQFQRIVAWSGRTQFG
DMAELEALPGDSPLLPMVTSTVDNCLGTDCPFYGECFVVQARQRAQAADL
VVVNHHLLLADLALKQEGFGEILPGAQAFVIDEAHQLPELAANFFGESFG
MRPWQELARDCMVEARLVAGAQASLQAPILALDEALRSLRAGMEGLPPRG
TQWRALAKPQVREGFDAVLSSLARLGESLLPLREASPGFDGCTARAQEAL
NRLSRWLGEDQPVADFAQDPPEEVVDNDVLWYELSPRGFRCQRTPLDVSG
PLREHREKSQAAWVFTSATLAVGGEFDHIAQRLGLSDPVTLLQPSPFDWA
RQALCYLPPNLPDPAARGFGTALIGALTPVLEASNGRAFLLFASHRALRE
AAEALRGAPWPLFVQGEAPRATLLQRFRDSGNGVLLGSASFREGVDVVGD
ALSVVVIDKLPFAAPDDPVFEARLDAIRREGGNPFRDEQLPQAVIALKQG
VGRLIRSETDRGVLVLCDPRLVNKSYGRTFMKSLPPFARTHAIADVQAFF
APEPGARDRAPG