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# Brucella suis 1330, 1330

>BRA0141 SyrB family protein, putative
MATEFEHGPDMYTPEDVIKNFKDHSSQSRSRGTKTLENEKHTANGRMVKR
YTPEERRKVFSEIATSVKSGQSSLKDALATAGISEQTYYNWKKIFTGNGP
ASSTTLGKDLQELIELEAENQRLRQELADKLRMENAELRRRLGKV
>BR2103 helicase, UvrD/Rep family
MKKKPFIPPETIDAQARAADPSASVWVSANAGSGKTHVLTERVIRLLLEG
TDPSKILCLTYTKAAAAVMQNRVFMRLSEWAVLPDEALAERLEKLERRRP
GAARLATARRLFARALETPGGLKIQTIHAFCEAILHQFPLEANIAGHFEM
MDDLMQAALVGEARRTLLETAYGGGDPALAAAFADVLQAAGETGLQSLLD
EAVGRRNGLQLYLAELGVGTHRMEALHRAFGFEPDAREDDLLADLWPVPE
FSDDALDLILSIPKGASRAQDFALQLKRLEKASGLPDKIAVLRAAFLKST
GEPKSGSYVCSAAVKKLLPEFEEEFDTAAARVEMGLDRLKELRLVRLNLA
ALTLIDNLLQRYHDLKCRRGLLDFEDLITRTVALLARNGAGQWVQYKLDR
GIDHILVDEAQDTSPDQWQVIRMLSEEFFSGLGQRNVQRTLFAVGDEKQS
IYSFQGAVPDDFAEQGRAISIQASNAELKFERVSLNFSFRSTPDVLQAVD
EVFARPEANRGLSGATVHSAIRDKEPGEIEIWDMLTPEMVEEPDDWRVPV
DQLAAPAVRLAEQIAATIRYWLDRGEPIPGQNRKIAPRDIMVLVRKRDQF
MPALSRALKNLSVPVAGADRLQLTSHIAIQDLMALGRFVLQPSDDLSLAA
LLKSPLFGWDDDRLFTLAYPRGAGDTLFEYLYRASRHDAELAQIHKLLSR
WRNMADTMPVFEFYARVLGADGARRKLLARLGPEAGDIIDEFQNYALSAE
RAGLPGLQAFLETLEAAAPEIKRELDQGRDEVRIMTVHAAKGLEGAVVFL
VDPGSAVWTGSRAPKLIPYDFQGDGPPVKGFLWQPNSSCQTGFTAAEIEK
LKNRAEEEYRRLLYVGMTRAEDRLIICGYRGTRESGETWHRLVEDALAAK
SETFVHPVTGVAARRYRKTPRSFIEINEEDQAGATSLPPLPHDYRQPMEA
EPGLPRPLAPSGASALIEADEEPPLDLSSPVLQPGTGAPAFALRRGTAIH
MLLQYLPDVAPEKREHLAADYLARIAADWPDAERLKAWQSVHAILDDPRF
GPVFAEGSRGEVAVMGMIDIGGRDHAVSGQIDRISVDESRVLIVDYKTNR
PPPKTLEAVPSAYRAQLALYRELLRPLYPGRVVEAALLFTEGPFLLLVPD
AVLDDAMGALKDTQGKVRNQNLTDGGRRAT
>BRA0626 exonuclease, putative
MTDIYNPSIHTRKKRVIVFDTETTGILPYDRIITLGAVKIEGGELLTQSL
YLIFDPRKDSSPQAEAVHGFDNWMTRYQDLFHELAAPIRKWFSWADEVVA
HNAQFDMHYIQREFRKAEVDMLDQPVYCTMDGARRLWRGDSTKLDHCLAK
IGLARMGHRHGALEDAYLTAGLYLHQQGVAKPLPKINSWQPPKNLKPYPE
RPAGELPRRTPKRRSAAVSACSTV
>BR1939 mutator mutT protein, putative
MTEVKKRRMLLVVACALVDQDGRVLLAQRPEGKQLAGLWEFPGGKVEPGE
TPEETLIRELQEEIGITTKIPCLAPLTFASYTYDDFHLLMPLYVCRRFEG
VARGLEGQALKWVRPKDMRDYPMPPADEPLIPFLVDLL
>BR0036 MutT/nudix family protein
MAFRLYDLPEMEPSRFVGFAGNRIERLSEKRPDDSAFTALELPETRIMIL
GDHKLLLDYGQEDAPRALFSLEEAHQFVLDLCEPVLLGLQDGTPLVALTA
TLYPEALPAPFRLQDYRSVYTEGLVPADLLGALAQTAALTAWHESHRFCG
RCGTKTEMRAGGAKRLCPQCGAEHFPRTDPVAIMLPVRGEKCILARGPHF
VAGSYSCLAGFIEHGETIEAAVRRESFEEMKLAIGRVAYHASQPWPFPYS
LMIGCHAEVLSDDFTVDRSELEDGRWFSKAEVRTMLEGTHENGLRVPPCG
AIATHLIKAWAYDAG
>BR0514 transposase, interruption-C
MRDFLTARGTQRVIPNNPTRKRIRLFDPIAYRRRNIIERTFCRLKDWRRI
ATRYDKLMINFAATCYIAAIVTWWIN
>BR0966 site-specific recombinase, phage integrase family
MVTVDLKGIHKVNAKGRTYYYAWRGGPALRGEPGSAEFMASLQEANDSRV
IPDASKFRAVITAYKSSHDYQKLADSTKRNWNGWLDRIGKKFGDLSIAQF
DLPQKIRPVIRKWRGEFADKPRTADYGMQVLSRVLSYAVDPLGKISQNPC
EGIKQLYKNDRAAIIWTDQDIARLKTKCSPEVAWAVDLAAHTGLRAGDLL
RLSWSHITDNAIILPTGKSRHTKEAVIPLYAELRALLQTIPRRSPIVLTN
TRKAPWTVNGFGSSFSDCREEAKLGDRDLHFHDFRGTAATKFYIAGLSER
VIAEIMGWEEETVRNIIRRYVSRTAAIEATIKQIDEARKRT
>BR1673 IS711, transposase orfB
MTTKLHAVVDAIGLPLRIKPTPGHYGDCPQASSLLSGLKGVGHVIADAAY
DADHLRAFIASDLKATAQIKVNPTRSSVPTIDWRLYKERHQIECFFNKLK
RYRRIALRCEKTLTAFMGFVHLACAMIWLR
>BR0869 conserved hypothetical protein
MEFMEKLDELRHSIQACRLCRDTPLFPPPLPHEPNPVCIISDTARIAICG
QAPGIRVHNTSLPFNDPSGDRLRQWLGVTREEFYDASRFAIVPMGFCFPG
YDKNGGDLPPRRECRQTWHDRVFAAMPQLEFILVVGQYALAYHLPDYRGR
NLTETVKNWRHFMETPSHTGRIALPLPHPSWRNSGWLKRNPWFDMEVVPV
LQAKVRHLIDDEK
>BRA0597 conserved hypothetical protein TIGR00250
MATAEIEEIPALLKPGQTVAGLDLGTKTIGLAVSDLGLSFAHPRPVIKRV
KFTIDAQVLLKALETDKVGVIVIGLPMNMDGTAGPRVQATRAFVRTMQPL
TDLPFVFWDERLSTVAAERALIGMDVSRGKRADRIDSAAAAFILQGALDR
LHMMRRNDYDAG
>BR1387 conserved hypothetical protein
MQFSPEQDQALKAVGQWLKAGRSPIFRLFGYAGTGKTTLARYFAEHVDGE
VQFAAFTGKAAQVLRSKGASNARTLHSLIYRPRGEEAIEDETTGKTSIAP
TFSLNRQSPVAKAAMIVVDECSMVDEALGRDLMSFGTPILVLGDPGQLPP
ISGGGFFTEHEPDYLLTEIHRQARDNPIIRMALDVREGRELSYGDYGAAK
VIGKSEVNQDIVLAADQVLVGTNRTRRRYNQRLRELKGFTADYPQAGDKL
VCLRNDPTKGLLNGSLWKVMTSSKETVKPGINLLVSPEDEDRGVAKIKLL
KAQFEDPDTEIPWQTKKRFDDFDYGYALTVHKAQGSQWDQVVLFDESFAF
RDTRERWLYTAITRAAERLIIVK
>BRA0607 MutT/nudix family protein
MSEPKPIPAKPRRCLRPRDAASLLLVDRSGATPRILMGRRHSSLAFMPGK
FVFPGGRADPADGAIAAASELSQNDTQKLLKGMGARASLRRARALGLCAI
RETFEETGLRIAHPASAHIVPPKHEDWCAFLERGMLPQLDSLRYFARAVT
PPGNVRRFDTRFFIAFRDSLPEVETQKLVPSGELEDLDWVLIDQIEKLDL
ARITQAILNEATALLMDTQLDLPATLPVVQYSKRHDRFVREVI
>BR1082 site-specific recombinase, resolvase family
MNNATVANVAATYRGQLVGYARTSTTDQKAGLAAQERDLQAAGCDRIFSE
QTSAKDSKRPELQRALDHLREGDTFIVTKLDRLARSVADLVDLTGQLSSK
GVSLRILAMNLDTATPTGKLMLNLLGSIAEFERELMLERQREGIAAAKAG
GKYKGRAPTAQRQADEIIRLKDEGKTVAEIMAATKAGRSSVFSILKEAGR
TERQR
>BR0993 DNA polymerase III, delta prime subunit domain protein
MIEELDIPKTHDAIEGVPGPSASAYLAGHDEIARFLAQAYHEGRMHHALL
FEGPQGIGKATLAFHLAGHMLSFGDRNEAPETLIAPDFSKPLWRQIAGGM
HPAVLHITRPFDQKTGKFRTAITVEEIRRVTHFLTRTASDHAWRIVIVDP
ADDMNRNAANALLKTLEEPPARALFILISHSSGRLLPTIRSRCQSISFKP
LDGETLGRALSHAGSKAGISAGDITEVLLQRSEGSVRKALLLLAHGGLEI
SDTVDQIIAGSIFDLPKAQALGGILNGREAEVQYELFRDYLMGRIAAEAR
RYADSGQLREADQWARFWSDLIRETVEAETYNLDRRQAVVILLEKTHRAF
RTGVPPLTSA
>BR1102 single-stranded DNA-binding protein family
MAGSVNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKD
RTEWHSVVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQDQNGNDRYST
EIVLQKFRGELQMLDSRSEGGEGRSFGGGGNRNQMSDYSGGGGDFGSSGP
SSGSSGGFSRDLDDEIPF
>BR1855 transposase, putative
MAIDFKGAHFPKNVILYAVFFYVRYPVSYRDLQEILAERGIEVDHATLNR
CVVRYSPQIATQAQMRKRHTAGSWRVDETYLKVRGKWVYLYRAVDRDGQT
LDFMLSERRNVGAARRFFKKAITSSGVPHKIVIDKSGANLAGAQAVNNIL
KITGADKLIEILQVKYLNNILEQDHRFIKRITKHMLGFKAFHSAAATIAG
IEVAHMIRKNQFANDNCSPFKVFAELTA
>BR0527 IS711, transposase orfB
MTTKLHAVVDAIGLPLRIKPTPGHYGDCPQASSLLSGLKGVGHVIADAAY
DADHLRAFIASDLKATAQIKVNPTRSSVPTIDWRLYKERHQIECFFNKLK
RYRRIALRCEKTLTAFMGFVHLACAMIWLR
>BRA1072 IS3 family element, transposase orfB
MKFAFIDTEKAHMSLSRLCAFAGVSISGYYAWKHRLPSRRQLDDMIILAH
IRNQFALSCETYGSPRMHVELNEEGIRAGRHRTARLMRENGLKARQKMRF
KRTTDSNHGEPVAPNLLDQDFTCDGPDQKWGVDISYIWTAEGWLYLAIVV
DLYSRRIIGWEARDRMKKDLAICALKKAIAIRYPKPGLIQHSDRGSQYAS
YEYRKILKSHSMLPSMSGKGNCYDNAMVETVFKTIKSELIWRAAFQTRND
AIKAIGEYIDGFYNPVRRHSTLGYKSPVKFEAMNRNLETEALHFSEASPV
SI
>BR2057 conserved hypothetical protein
MAQKKAHEVDSFLARPTSSFPVVLLYGPDKGLVNERARRYAAASKLPLDD
PFAVIRMEADEIEADPAKLADEAGTISMFGGQRLIWIKNAGGQKKLAEAV
KRLAAEPPQETFILIEAGDLKKGAGLRSAVENASAGMALPCYSDDARGID
GVIDDILAEWKMQITLDARQLLRASLGGDRLATRGELEKLCLYTRGKERI
DIDDVREAVGDVAGLSTDEVVDAVLAGDLPRFEIAFDRVVKSGTAPFLLL
TAAMRQFQQVQALRHIADTERKSASMVVASARPPIFFNRKKLIETAISRW
TGESLTRVMERLQRAVLESRRNAALSVPIIRQCLLAISVESLRNARR
>BRA0364 repA-related protein
MSSRNSGLKPIGAVIGDSGGLLERLENIRKRNSDRTPAAERGRPSNVSTV
HEQMERAKERDKALSLVRKPPQGDAQPDFFAPSLYDVGGRDNRSVMDVAV
FRLSKKDKRAGELIRYDLPDGYVEVSAGAHGMASVWDYDIVLMMVSHLTE
AMNRYREGKGGKPGRVFRLHVSDILRFARRGNGSSQVKGVEAALDRLRGT
TIKTVRESGRFRATEAEGLIARYRVLSRTDTKKISSVEIEAPEWIYREVT
GGKRPEVLTVHRDYFLIEPGIGRFIYRLARRAAGRDSAKWAFKTLYERSG
SGGSFKKFCFFLRGIIKADDLPEYALCEEAGKDGPLLVMRHRNSSSEPLG
GS
>BRA0844 conserved hypothetical protein
MSDIKLFRTDSASVTELRGSAVALEKLLQTLIERNMEAFLGVRFLASEFP
TSNGGRMDSLGIDENGSPVIIEYKRASNENVINQGLFYLDWLMDHRRDFE
WLVLERFGAEQAKAVDWGTPRLICIAGDFTKYDAHAVNQMNRNIALVRYR
RFGGELLLFELLTSASERSAREIPASIDTQDEPAAARPRSRQKTVMQYLA
DADQDLVDLYEATKAYLLALGGDVELKPLDNYVAFRRLKNFACVEVKPQI
RHLKVFVKVDPDTTELEPGFTRDVRNIGHFGIGDLEIIITDVATLDTAKP
LMDRSYDEA
>BR0723 exonuclease, putative
MKTAIIFDCEFLCIKGSQSRFWCAAIDPDPVIAQIGAVKIGLENELPILE
TFKAYVTPHDRYGAHYAIAPYFTDLTGITEEQISRDGKPLKTALNDLDSF
SDGATFWSWGKDELNMIAISCYVEGIAPPIPAPRFDNAVKLLLAAGMPVE
DLARTPSNKLADYYGLEHPELQGHDALDDARSIGYTLQYLLSSGKLEPSA
FSS
>BR0996 hydrolase, TatD family
MLVDSHCHLDFADFEPERDAVVQRALDAGIKRMVTISTRVRKFDAIRTLA
ETYEAVYCSVGTHPNNAHEELDITADDLVRLAEHPKVVAIGEAGLDYHYD
YAPKEAQQQGFLAHIDAARRTQLPLVIHARSADIDMAEILEKETEKGAFP
FILHCFSSGRALAEKGIELGGYISFSGILTFKNSADIREVASIVPRDRLL
VETDAPYLAPVPHRGKRNEPSFVQHTAAVLAETIGVSPEEVAAITSDNVF
RLFSKMPRPAEGI
>BRA1115 IS3 family element, transposase orfA
MKQREFTEDFKREAVRILTTSGRNISSVAEDLGIGKSTLERWRRNFAEKD
LLSGPHEDMDQELARLRKENELLRQERDLLKKATAFFARETSR
>BR0528 ISBm1, transposase orfB, interruption-C
MQTRPKVAERKAWANIPPKSNRKDSFVFSRWVCRQRSLVERFFNRIKQFR
DIATRYDKRPENYLAAVKLVATRIWCQSL
>BR1563 MutT/nudix family protein
MRFRHFIFHTYFLFRRPMTLGVRAVILDEKKNSVFLVKHTYVPGWQLPGG
GVERGETFGQALEKELREEANIVLKGPAKLFALYKNAHASPRDHVALYIC
REFEQTGPRLPDLEIASCGFFPLDDLPEGTTASTKRRLQEVLHDLEPLPF
W
>BR1045 MutT/nudix family protein
MKTQAKQLVATEKRILTPSGRLQQVAALVYRREMGALQVLVITSRGTGRW
IIPKGWPQVGRTLAGAALREAFEEAGIRGDVSRDPIGSYIYCKMDLPPER
INQFTVAVYAVQFTSQEKDWPEREQRLCEWVSPGEAANRVEEVELKQILN
GFADSGFAAAAE
>BRA1073 IS3 family element, transposase orfA
MKQREFTEDFKREAVRILTTSGRNISSVAEDLGIGKSTLERWRRNFAEKD
LLSGPHEDMDQELARLRKENELLRQERDLLKKATAFFARETSR
>BRA0559 ISBm1, transposase orfA, interruption-N
MIQSFEIGKPLMTRRRYELTDHEWSIISPLLPNKPRGVARVDDRRVLNGI
LWRFRTGSPWAEVSERYGPPTACYNRFVRWRKAGVWDRLLEAVSKAYDGD
IVMIDSTCVRVHQHAATGKKGMETMVAWDVP
>BR1836 (di)nucleoside polyphosphate hydrolase
MESGMSKHKGPTGAMVDPESLPYRPCVGLMVLNKAGLVWAGRRIVIPGDE
MDGATQLWQMPQGGIDKGEDPAQAALRELYEETGMTSVSLLEEASDWINY
DLPPHLVGLALKGKYRGQTQKWFAYRFEGDESEIAINPPPGGHTAEFDCW
EWKPMADLPNLIVPFKRKVYEQVVATFRHLAA
>BR1851 transposase, putative
MAIDFKGAHFPKNVILYAVFFYVRYPVSYRDLQEILAERGIEVDHATLNR
CVVRYSPQIATQAQMRKRHTAGSWRVDETYLKVRGKWVYLYRAVDRDGQT
LDFMLSERRNVGAARRFFKKAITSSGVPHKIVIDKSGANLAGAQAVNNIL
KITGADKLIEILQVKYLNNILEQDHRFIKRITKHMLGFKAFHSAAATIAG
IEVAHMIRKNQFANDNCSPFKVFAELTA
>BR0690 conserved hypothetical protein
MAEILFYHLTESTLDEALPGLVERSLGRGWRVTVQTVSEERRDALDSLLW
TFSDTSFVAHGTDKEPNPEHQPVLLTTTETNPNGATVRFLVEGAKLEQAG
DYERLVVMFDGHDQDQLDIARTQWKAFKAENHDLTYWQQTPDRRWERKA
>BR2102 conserved hypothetical protein
MCASRPGDGKQRLFSIPPGQPFLPAFAKALIEGRLIEGFPGHPSDPLALA
SATIYVPTRRAARALRTILVDLNPVKSAILPRISPLGDVDEDAAFFNAGA
AGVFDLNPPIGTAERLLLLARLIRPWRESLPSHVRALFGVDDVSVPATTA
DAIWLARDLAALMDQVETDGAKWSKLTSIAPDDLADWWRVTLGFLDIVTR
LWPDILAERRLSNPAAHRNDLIRSEVKRLRDHPPAGPVIAAGSTGSIPAT
AELISTIASLPQGAVVLPGLDRDLDEAAWKLLGEAGDNPSIFGHPQYGLH
KLLQAIGALRQDVDVLEDMPRAKRLRERIVSEALRPAETTDAWGLLNRDP
DMQPSALREAAARIDLVEASNEREEALAVALALRDALADERKTAALVTAD
RNLARRVVGELARFGIDADDSGGRHLRDVETATLLRLLVETVFNPGDPVA
LLALVKHPLLRLGGARIDRRLAGETLELVAFRGGTGRAGILDLPAFFERR
LKESADQPWQPAWHTTVTQDMIEAARGLCESLSAAVEPLAPFVTANRRTD
IGEIARATVEALENMARDETGSVAAFYSGERGEKLASFLRGLISSEAELD
FEAMEWPAILDALMAGETVKPHPGGHPRLFIWGALEARLQTVDAIVIGGL
NEGSWPTKTRNDPFMSRPMKAMIALDPPERRTGLAAHDFQMALGMDHVVL
TRSQRSDNAPTVPSRWLQRLETVLGADVTNEMRGRGTRFIHWSREIDRAE
DVPFVRKPEPAPPVAARPKHFSVTEIETLRRDPYAIFAKKILKLRPLEPL
IRDPAAAERGTLFHDILGHFTQAAIDPLAPDAAEKLMELGRILFADMDLP
LEIEAVWWPRFTALIPQFLQWERERAYKVQERFAEIASQKREVENLGITL
SGRADRIDLMRDGTAEIIDYKTGSTPSPKQAHVLLSPQLALEAALLARGA
FLDVGPVRACDLTYVRLKAAGEVKPESILKISRPPSEKTAPALGEEAWQR
LAQLLAEYQKPEKGYLSRALPFRETDLTGDYDHLARVLEWSAGGDSGGEG
GE
>BR1052 ATP-dependent RNA helicase, DEAD/DEAH box family
MGRLIFIGFPGLGLVASHLPHRNGPAEEGTRNQFGHDSASRQRVFRRPVV
IIKWNYVRQVALARRFKADRECAVPLKEIELTKENTGGFAALGITGVLLK
GVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQTGSGKTAAFSLPILQKII
GLGDKRRPKTARALILAPTRELAVQIEQTIRNVSKSAHISTALVLGGVSK
LSQIKRIAPGIDVLIATPGRLTDLMCDGLVDLSQTRWLVLDEADRMLDMG
FINDVKRIAKATHAERQTALFSATMPKEIASLAERLLRDPVRVEVAPQGT
TASEITQVVHPVPTKEKRRLLSAMLTDADMRSVIVFTRTKHGADAVVRHL
ERDRYDVAAIHGNKSQNARQRALNGFRDGTLRILVATDIAARGIDVPGIS
HVVNYDLPDEPETYVHRIGRTGRNGASGASITLYDPATEESKLRAVERVT
RSKLSIKDAPVKLAPAPVAKGPAPQGQRTEQAESRKAPAHKHRRPAQKAG
EQHRAGAHASAGEAAPKPKRPFRRKRRSNGGQRAA
>BRA0558 IS66 family element, orf1, transposase, putative
MDLGSVDVDEKASPHSADDRHQHYAVSKVVDDRPAPRRVEVLLGKERRRR
WSADEKAEITAASFVPGANISAVARQYGVSQGLLHYWRRCAREHMSDDEE
MRFVPVVRADEGLGVPAAVTALTIRVEINGTCAVIEGGIDEQALCMVFKA
LRASA
>BR0714 conserved hypothetical protein
MHDAPRQIPLNLEHQPGYNREDLIVTASNRAAVDLIDRWPNWLSPVTILA
GPTGAGKTHLAEIWRSGTDALLVDPSNITEEAVNSAAERPVLIDNIGAQA
FDETGLFHLINSVRQHAAQGPGPSLLMTSRLWPANWNVKLPDLASRLKAA
TVVEIAEPDDMLLSGVIHKLFADRQVSVEPHVVSYLVSRMERSLLSAIQI
VDRLDRAALEQKSRITRALAAQILADMGQAG
>BRA1006 exonuclease, putative
MRHQFDLFAPPSEDGEKREEQRPACGKTAKAPAIDEAEMVKRLKESGRYR
ILQRLDPPPIVPDADRIAFPRLGVVVDTETTGLNPAQEEIIEIGAVAFRY
ADDGSIGDVCATFGALQQPSKPIPAEITRITGITDEMVKGRTIPRDELDA
LIAEADIIIAHNAGFDRPFLERLSIAFANKPWACSVKEIDWTARGFEGTK
LGYLIGQSGYFHNGHRAEDDCQALLAVLKGKSGKTTPFAELLKASQRARM
RIYAENSPFEMKDHLKARGYRWSDGTDGRPKSWWTEVGEDELEAELEYLR
TEIYGWRDADPLIQKLTAMDRYKERGPLRAKK
>BR1491 MutT/nudix family protein
MPLRKQSMTPPARPIDKVLIYATLRERLLVFAEPDSPQMPLQVPGGTVDP
GEDVHLAAYREFEEETGIKVRDGMAHLETVDYAFPDEQGTELHRRHCFHL
RLRDEQPETWDHYEMSPCDGGAPILFRLFWLDRQAAQARLGFEMAKSLDK
ISF
>BRA0615 ImpB/MucB/SamB family protein
MAESPIVNHPEQGLCRDCLSLQKTQTSRRCHACGSPRLIRHKELYRLSLA
HVDCDAFYASVEKRDNPDLRDKPLIVGGGKRGVVSTACYLARIHGVRSAM
PMFKALEACPDAVVIKPNMEKYARVGREVRQMMRDLTPLVEPISIDEAFL
DLSGTERLHKAPPAVVLARFSKRVENEIGITASIGLSYCKYLAKVASDLE
KPRGFSVIGEAEALDFLRDKPVGMIWGVGKAFAAKLESDGIRTIGQLQTM
EEGALMKAYGTMGQRLYRLLRGQDSRKVEPDHDMKSVSAETTFNTDLSAA
GDLVPVLRALSEKVSRRLKAGEIAGRTIVLKLKTQDFKLRTRNRQLGDPT
QLADRIFRTGLQLLEKEMDGTRFRLLGIGVSDLSPSDRADPPDLVDIQAT
KRAVAESAIDRLRNKFGLNAVETGYTFSKGNLARTQTPTDRDNEP
>BR1413 DNA helicase II
MSDFPDDMPFFGDDDAPAGRAPAPGSIAARAMAARNQQHGEPDYLKGLNP
EQKQAVLTTEGPVLVLAGAGTGKTRVLTTRIAHILSTGLAYPSQILAVTF
TNKAAREMKERIGHLVGGAVEGMPWLGTFHSIGVKLLRRHAELVNLTSSF
TILDTDDVIRLIKQLIQAEGLDDKRWPARTFANMIDGWKNKGFSPADIPE
GDARSFGNGRGRELYQAYQERLRTLNACDFGDLLLHPIRIFRNHPDILRE
YHAKFRYILVDEYQDTNTAQYLWLRLLAQRPKSRTTAPTQAGGSPVQPAR
ASEGPCGAGERSELGVSEDKVNLCCVGDDDQSIYGWRGAEVDNILRFEKD
FPGAVVIKLERNYRSTAHILGTAAHLIAHNEGRLGKTLFTEVPNPDDPRV
KVHAAWDSEEEARAVGEAIEQAQRQGHLLNNMAILVRASFQMREFEDRFV
TLGLNYRVIGGPRFYERLEIRDAMAYLRVVAQPADDLALERIINTPKRGL
GEAAIRQIHDYARARDISMFAAACDLIETEELKPKPRSALREVVENFLRW
QSLIDTTPHTELAETILDESGYTAMWQNDKSAEAPGRLENLKELIRSMEE
YESLRGFLEHVALVMDAEQNEDMDAVNIMTLHSAKGLEFETVFLPGWEEG
LFPHQRALDEGGRSGLEEERRLAYVGVTRAKKNLHIWFVSNRRIHGMWQS
TIPSRFLEELPEAHVEVAELEGNYGGYGGGYGQSRFDKADPFQNSYSTPG
WQRAQQNRSDATRNNWGSRSGSRVERIGYGETDSGFGAGRGSVKGRTIEG
ELVAKSVADKPSAFKLGDRVFHIKFGNGTISLIDGNKLTINFDKAGQKRV
LDSFVQPI
>BRA1112 hypothetical protein
MMRYQSCRHWLQISASFQCYHGRLPISDATRGRVDATHREAMDRLSCNQE
DIVGFLKRISSSDVKMFTLSEDEISPLHVGLKSRMNALILKDLADKTRRN
QGGRDDAEKSCGGNSYGYAPRLGIDLLEDTARHRLRSAKFVSSRSDLQRL
AHLSFWCRAQLDIPSQKREP
>BR0281 MutT/nudix family protein
MKTIRISAAIIRDEAGRFLLVRKRGSEIFFQPGGKIDDGEDPETCLLREI
EEELGIRIGRSQLRYAAKMAAPAANETDATVEAELYHLTLEEGQVPVASS
EIEELRWNPPGDTTRPVALLSQAIQARFA
>BR0531 IS5 family element, transposase orfB
MLHAFPKAKDLLADKGYDADWFRDALAERKITACIPSRANRKDVIPYDPV
LYKRRHKIENMFGRLKDWRRIHTRYDRCAHTFFSSICIAAAVTVLQINSD
FNVLKNVSTIALS
>BR0648 phage SPO1 DNA polymerase-related protein
MISEPSPNCSICPRLHAFLQEWRQKEPAWHNAPVPPFLPGSDEDVRLLIV
GLAPGLRGANRTGRPFTGDYAGELLYSTLCEFGFATGKFEARPDDSLRLL
DACIVNAVRCVPPENKPVGSEINNCRQFLTPMLTRFPNLDAVVTLGTIAH
QSTVRALGVPVSRHPFGHGKATDIGPLRIFSSYHCSRYNTNTGVLTDAMF
RDVFKNVRAYLSEKAAGSARLSV
>BR0636 site-specific recombinase, phage integrase family
MIIVGETKIDTGDKYAPIIDYNLNYISGKNPKHRLVEHYSVAELTAKYIN
ILWDDGSHKYNVRSFLGEIDEILKGARFSGFDQEMLDSIIGTLRERGNSN
ATINRKMAALSKLLRKAHKMGDIFNLPEFIRQKERVGRIRFLEQEEEKRL
FAAIKSRCEDSYRLSVFLVDTGCRLGEAIGLTWNDIQEQRVTFWVTKSNR
SRTVPLTRRARKASHIPRERLKGPFSMLNQVRFRQIWNEAKAEVGLGADD
QIVPHILRHTCASRLVRGGIDIRRVQMWLGHQTLQMTMRYAHLATHDLDS
CVKVLEIH
>BR0534 ISBm1, transposase orfB
MGRSRGGLTSKIHALVDAEGRPVNLRLTGGQIADCAEADALTNELGEGDI
LLADKGYDTNAIRAKAAARKAWANIPPKSNRKGSFVFSRWVYRQRNLVER
FFNRIKQFRGIATRYDKRPENYLAAVKLVATRIWCQSL
>BR0124 ATP-dependent RNA helicase, DEAD/DEAH box family
MSLPDTIAPALSGALTARGYNTLTAVQNAVLAPETLASDLLVSAQTGSGK
TVAFGLAMANTILEDELRFGDAGAPLAMIIAPTRELALQVRRELEWLYAD
TGARIASCVGGMDIRTERRALERGSHIVVGTPRRLRDHITRNALDMSQLR
AIVLDEADEMLDMGFREDLEFILGEAPEDRRTLMFSATVPKPIAQLAKRF
QNNALRITVQSETSQHADIDYVAMPVPPHERDHAIINTLLYYDSQNSIIF
CSTREAVKHMASRLSNRGFAVVALSGELSQAERNNALQAMRDGRARVCVA
TDVAARGIDLPNLDLVIHADLPTNPDTLLHRSGRTGRAGRKGTCVLVVPF
SRRRSAERLLHMAKLDAQTVPAPSIAAVQAKTNERILNAEVFNQPVEEEY
QELLKALAERYTPEQIASAFLNREVASYPAAEEVSDAPVHPVGGKKPRSD
RFEKGDRYERGERRERGEPGERFDRNARFDGVWFSVSAGRKHRADPKWLL
PLICKAGDVSKRDVGSIKIFDNETRFEIAASKADEFRQSVAERGTGEKSL
VIRTAVAGAGGDAAARESRGSFKPRSDKFKEGGFRDGHKSDKPRDFSRGD
DFKKDGFKKGGKKPEGGGYSKKRRGE
>BR1105 DNA-binding protein HU
MNKNELVAAVAEKGGLTKADAGTAVDVVLASVTAALKAGEEVRLPGFGVF
SVSHRAASTGRNPSTGKEVAIPARNVPKFSAGKGLKDAVNG
>BR0533 ISBm1, transposase orfA
MTRRRYELTDHEWSIISPLLPNKPRGVARVDDRRVLNGILWRFRTGSPWA
EVPERYGPPTACYNRFVRWRKAGVWDRLLEAVSKAYDGDIVMIDSTCVRV
HQHAATGKKGMETMVAWDVPAAGLRAKSTRSLMPKVARSIYV
>BRA0556 IS66 family element, orf3, putative
MLNRGQHLPRDPDILVGMILERDAEIERLKVLLKAANAKPFGQRSEQLAH
MVERQIRLDLGDVVHEPEVASASEGAGLPKMPRQASAHSRPRRNIGALPE
HLERVVEVIEPSSLECACCQGKLHCIGEDESEVLASRPATLYVLRTVRPK
YACRACEAGIVQAKAKPRLFDGGLATTSMISNVVVWRYAWYLPLNRQVQM
LKGQGVRLDTSTLCSWVKRSAWWLKSLYDKLLAYIHSHSRVFVDETRMPV
LKRDRTRTKICQFWAHAVDDRPWNGPAYPAVAYVFAQGRGKTEIQSQLVR
YSGILQVDAYKAYKSLTRPDRRAGSIALAYCLAHARRKFVDVFKKYKSEL
AKVVIERLAEVYAIEASIRSTSAEHRLGVRQAKSKVLMADLKMLLMDTLK
DISAKDPVASAIKYTLGHWAGLTLFLEDGRLEVDSNTVERNMRSVALGRV
NSLFAGSDGGAETWAILSSLLTTAKLNGLDPYTWLNDVLERIVSGEIKST
SLWRCLPWHWKQEHADMNMAVAA
>BRA1038 conserved hypothetical protein
MEIIVYILRCADGSYYTGLTKQNIEARLWEHNEGIYDSYTKKRRPVELVF
TETYGRIVDAIARERQIKGWSRVKKEALIALNYEGLPELAKRR
>BR0523 ISBm1, transposase orfA
MTRRRYELTDHEWSIISPLLPNKPRGVARVDDRRVLNGILWRFRTGSPWA
EVPERYGPPTACYNRFVRWRKAGVWDRLLEAVSKAYDGDIVMIDSTCVRV
HQHAATGKKGMETMVAWDVPAAGLRAKSTRSLMPKVARSIYV
>BR0513 ISBm3, transposase, programmed frameshift
MNIHKNARLTPLRREEMAVAVLGGRLTKAQAARLYGVSLKIVSRWTERFR
ISGRAAMTDRSSRPTRSPRQMGQDIVERILHLRRQRLTGKHIAMETGVSP
ATVSRILRRAKLSRMKDIDPVEPVIRYEYAEPGGLIHLDIKRLGRFERVG
HRITGNRTRQSNARGVGWEYVHVCIDDVSRIAFTDIFPDEKHHAIAVLKA
AVAYYASLGVTVTRVMTDNGACYIAKACKALDLKHIRTKPYTPKTNGKAE
RFIQTALREWAYARAYPSSQIRKAHLPNWTHMYNWHRPHSGLKSKTPISR
LGLNRDNLLTLHS
>BR1206 ATPase, AAA family
MSDLFSTAADPNADRNRPLADRLRPKHLSEVTGQEHLTGPEGVLTRMIAS
GSLGSMVFWGPPGTGKTTVARLLAGETDLAFEQISAIFSGVADLKRVFEA
ARARRMSGRQTLLFVDEIHRFNRAQQDSFLPVMEDGTVILIGATTENPSF
ELNAALLSRARVLTFHPHDSESIATLLKRAEEQEGQALPLDDEARASLIR
MADGDGRAALTLAEEVWRAVRPGEVFDAAKLQDVVQRRAPVYDKSQDGHY
NLISALHKSVRGSDPDAALYYLSRMFDAGEDPLYIGRRLVRMAVEDIGLA
DPQALAICNAAKDAYDYLGSPEGELALAQACVYLATAPKSNAVYVAFKNS
MRAAKENGSLLPPKHILNAPTKLMKNEGYSEGYAYDHGQPDAFSGQDYFP
EAMGRQVFYNPPERGFEREIRKRLEYWARLRQERQRR
>BR0530 IS5 family element, transposase orfA
MSDLLLLSQAQVCRIKPYFPLSHGVPRVDDRLILSGIIFVLRTGLRWRDA
PREYGPHTTIYNRFIRWSRLGVFNRILAELAAKRGKPDQLMIDATHLKAH
RTAASLLKKGMFPDVLGAPKVA
>BR0135 IS711, transposase orfB
MTTKLHAVVDAIGLPLRIKPTPGHYGDCPQASSLLSGLKGVGHVIADAAY
DADHLRAFIASDLKATAQIKVNPTRSSVPTIDWRLYKERHQIECFFNKLK
RYRRIALRCEKTLTAFMGFVHLACAMIWLR
>BR0178 conserved hypothetical protein TIGR00252
MTDLREKKRIAFFRGHSAERLAAFALMLKGFRIVARRYRTRLGEIDLIAR
RGDLVLIVEVKARASFEAAQFAVTPQAMRRIEAAADLWLQRQTDRARLSL
RFDMVAVLPRRWPKHVPAFFTAGHYG
>BR0620 phage SPO1 DNA polymerase-related protein
MTDGRETLDMEGLLRFYAEAGVDVPLCETPIDRFAAATHPAPAQSRMQAA
AQQPESNPAQAREERARTVAVPSPSSKPVQAAMDLPDNAQIALAREAASQ
AETLEELREKLAAFDGCNLKFTAKNLCFADGDPSSDIMFIGEAPGRDEDM
EGLPFVGKSGQLLNRMIEAIGLKREEVYIANTIPWRPPGNRAPTPLETEL
CRPFIERQIELAAPKVLVALGGPAGKALTGAAEGILRLRGNWKIHRTPTG
MEIPVMPTLHPAYLLRTPAQKRFAWRDFLAVKLKLAELRG
>BRA0889 ada regulatory protein, putative
MLFTLPNQDKLYDALVARDASYEGRAYVGVLSTGIFCRLTCPARKPKPEN
CRFFASVAECMADGFRPCKRCHSLQPAAEAEILVKKLLNALETDPERRWS
EEDVVRMGFDPSTVRRSFRRHFGMTFLEMARQERLRHSFQVLAGGGRVID
AQVDAGFESPEAFRSAFARIVGLPPAKLRKEGLLRADWFKTPLGTMIAIC
DVRSLHLLEFADRKALPAELKKLHAACRGDIGIGRFETHDLVERQLNAFF
EGRSAVFDLPLVMHGSPFTQDVWRELQNIRAGETRSYSEIARAIEKPLAV
RAVARANGANQIAIVIPCHRVIGADGALTGYGGGLWRKQKLIEIEAQYRR
>BR0387 conserved hypothetical protein
MAVIHQAEIIGQADRLAFGAGRAEHANAVIGEAGLRIDHARRRGRGAGIN
PSGRFEPTVRQEFDDGWSTLEELPAFKTDVQIEKPRTIITRNDSPDISFD
RSINPYRGCEHGCIYCFARPTHSYMGLSAGLDFETRLFAKPDAPRLLERE
LARPGYQPKTIAIGTNTDPYQPVEKKWRIMREILEVLEAANHPVGIVTKS
ALVVRDIDILSRMAEKGLAKVALSVTTLDAHLARTMEPRASTPSLRLQAI
RRLTDAGIPASVMMGPVIPGINDHEIERILDAAYAQGAREAGYVLLRLPL
EVAPLFKDWLLRNYPDRYRHVMSLVRSMRDGKDYDAEWGKRMRGTGPYAW
QIGRRFEIAARKLGFNTQRLRLRTDLFEPIQKGGKQLSLF
>BR1554 MutT/nudix family protein
MVTARMRDAAVLVPVVDRGAEATLLLTRRTDTLRKHSGQIAFPGGAIDPE
DGTAERAALREANEEIGLAADRAEIIGNLPRYLTGSGFSITPVLAVVKTP
FDVHPNPDEVADIFEVPLSFLMNPANHRRESRLFNGKERFYYAMPYHERF
IWGATAGIIRGLYERLYV
>BR0664 DNA repair protein RecO, putative
MEWRDEGVILGTRRHGETSAIVEVMTCGHGRHMGMVRGGRSRRMQPLLQP
GNHVDVSWWARLDEHMGTFTIEPLSFAAARLIETPVALYGIQLAAAHLRL
LPERDPHRGLYETLRLIIEHFDDPLAAGELLLRFEVMMLEELGFGLDLKE
CAATGRKDDLIYVSPKSGRAVCREAGAPWAEKLLSLPSFVNDTALRASCY
DDLDRAFTMTGYFLMRHVWEPRAQTPPDSRSGFLNAVGRAINLSQAS
>BR1078 site-specific recombinase, phage integrase family
MGLLLRYVFQTKFGTWHYRRRVPKAAQAFIPKGEFKRLLGETRREALRNW
PRVNAEFERLISPPDDKSDPHRNTPPQPESVQPQSAQPDEGLGAPVREPI
EAVRRKPSEPTLEDAKRLYVQERVKGDINEIHKAARIERVMGHLHTIIAP
DCLLSKLTRKDARAVRDRMLGELEMKPITVKRYLCDVSAMVNLGIREFDV
RDAVNPFQNLPIKAETTATVAREERDPLPADVVSAMRERLSANAASDIWN
LWQILEGTGCRLGEISGLLRSDVHLKGQIPYLDLVFHEHRRLKTVGSIRR
VPLIGSALKAVKDALKESEGSEFLFPRYGRVRGADSASAALMKHLRAVSE
NPKHAVHSLRHGMEDKLTRAGVSEFDRNLVLGHSSGGMSERYGGAEVRLE
IAFKAMKKVAGAGD
>BRA0379 DNA-damage-inducible protein J, putative
MASSNDVVRARIDGHIKEEATNVLSGMGLSVSDAIRILLTRIATDKALPF
DINRVQAQPSIKKP
>BRA0557 IS66 family element, orf2, putative
MHGVQSAQGLGVISLGSDLRIMIASKPVDFRKGINGLAALVSTALGANPY
SGDIYVFRSKRNDRLKMVVWDGSGMVLLTKVLEDRRFIWPAVHAGAVRLS
ASELALLLDGLDWTRVEKKPVKRPAKTA
>BRA0207 conserved hypothetical protein TIGR00095
MRIVGGKFRGRALVTPSTNAIRPTTDRTRESLFNILAHSFPDKVEGVRVL
DLFAGTGALGLEALSRGARYATFVEESAEGRGILRQNIEALGLQGHTKIL
RRDACQLGIVGTMEPFDLVFADPPYGRRMGEKAFLSALQGGWLNPDALLV
LEEDAQAALELDDRFAVREERNYGGTVIRLIELKAAS
>BR0524 ISBm1, transposase orfB, interruption-N
MGRSRGGLTSKIHALVDAEGRPVNLRLTGGQIADCAEADALTNEFGEGDI
LLADKGYDTNAIRARCLVPACDGVELSPTQRRELRDKFFTAAPRPRTPFE
QSYSDRKLRPRSLRGGTASMRKRS
>BR0870 nuclease domain protein
MRQFMRPYRHTSPAPRRRKIGGFLSILLTLLLFFILGMLIFHLPANQPDR
NEPSGRPYIIDGDTVVLGKTHIRLKGIDAPEIGQSCEGAHGTYDCGGEAR
NKLRARIGRASIRCESSGRDRYDRVLARCFLGETDLNQWMVQEGWAVSYG
NYQRDEADARRDKRGIWAGKFERPSRWRKEHPHPNRKQP
>BRA1130 conserved domain protein
MTQAGTRNLRKLVELQKLGCARHEAALAIANARKSALDEERAALIAMQDR
RYDANALDIDPSLVIRRLETNAVEMQQVESRLELARKALLKEQRRVELLQ
DRLNDAQADRERRELASLIEEFVSRKTSDESQKRS
>BR0256 site-specific recombinase, phage integrase family
MPAPYKHPKTGVYYLRQRVPADLKDKARGKIVALPISGTLKSFTVGDSVK
ASLETKDPADAKARYREADASLSKFWEAVRNGPLSLTQKEIAERAGLVYK
FFADTFEDDAEAPELWERAQRINAVVLKKAKLGKRPTYPLTVAQRDILEP
RFGGFVDKLLIDTGEQVDQESRDKLLVAVAEALQQSTGTILKRADGDYSP
DTAIRQRYPEYAPIEKPQAVPRQTEERSGAKLDLYNLLDHKFKDKGKAKT
HRDYRSEIDKFVKFIGHSDAERITKDNVREWRDALIAQGLSLKTVNDKRL
TAIKAVLAHGVAEFSLSQNVADGIRDKRQEAAPVGSKGYSPEQAKAILQA
TFNGTDKELDPHYQRAVFWVPWICAYTGLRVSEVTQLQGKNVRNVDGHAI
FVITPQDGSTKSGKAWTTGIHPHLIEMGILDMFKAVGDGPAFYRAYPVGT
DLQKIAGKHRAKESASRVGDWVTATLGETAPGGRPNHAWRHTFTTLSRRV
KMDKEARDYMLGSRSRTDAREGYGDWTPDVICGEIDKLPRFDVKETDYRP
TLRVMKPKPISEPYVRPKKTRGGKLVLTPRVPKG
>BRA0602 DNA processing protein DprA, putative
MKQGANPKTGIRLSDRQRLNWLRFIRTDNIGAVTFRDLILFCGSASNALE
MLPDLNIRGGSARPIRIISVDEAERELEAIERMGARLIGMGEPEYPPQLK
NCEAPPPLVIIKGDPGVFRKPPVAIVGSRNASVVGARFTEKLAHDLGSEG
FCVVSGLARGIDAAAHKASLSTGTAAVLAGGLDRPYPPENLPLYRAIPEN
GGALITEMPMGAEPRSRDFPRRNRIIAGLSLGLIVVEAAERSGSLISARM
AGEMGRTVFAVPGSPLDPRARGTNLLLKQGATLVTGVEDVIETLLPLIRP
ADPAGDEPEQPDLLTQIDEEPEQLQAITTDRERDLVIDALGPVPVDVDTL
VRHTGIETDAIQLILLELDLAGRLLRYPGNRVAIVPCDEFTQA
>BR0070 conserved hypothetical protein
MTERTANALRLTAVDGEAAKLGLFPGMALTDARARVERLDVAAAAPEHDT
ALLKRLAQWCERYTPLVAFDEPHGLMLDITGCAHLFGGPAAMRADALCRF
ERAGLHVQAAIADNSFAARLLARGTKGGVFSQAEADRLLPRLPLSALELA
QAAETGLKRAGLKRIGDVMALPRSALTARFGTDLATRLDRLARRERAPIS
PLRILPLRTVERRLSEPVTAMELVEHILRELAQALFAQLEMEGKGALLLE
ASFFRVDGEVRHIRIETGQPLRDDRIFLRLARERLGALTDPLDAGFGFDM
IRLAALRSSTVAQRQTGLDQHEEDEAGFSQLIDRLSARLGQDRVLVSFPR
DTHMPERAYGLAPALHGSRKTEADYRSQAELPGDSPARPIKLFRPPQLIE
TVAEVPDSPPSFFLWRRVRHQVRLAEGPERIEPEWWCAIGQDVPELRDYY
RVEDENGQRFWIFREGLYDGANHPRWFLHGLFA
>BR0938 ATP-dependent RNA helicase, DEAD/DEAH box family
MTTFAELGLSPKVIAAVEAAGYTAPTPIQAGAIPPALERKDVLGIAQTGT
GKTASFVLPMLTLLEKGRARARMPRTLILEPTRELAAQVEENFVKYGINH
RLNVALLIGGVSFEEQERKLERGADVLIATPGRMLDHFERGKLLLTGVEI
LVIDEADRMLDMGFIPDIERICKLIPFTRQTLFFSATMPPEITKLTEQFL
HSPVRIEVAKASSTAKTVTQRLVKSGKKDWDKRAVLRDLIQSEGDSLKNA
IIFCNRKKDVSELFRSLTRHEFDAGALHGDMDQRARMAMLSSFKDGKLRL
LVASDVAARGLDIPDVSHVFNFDVPIHAEDYVHRIGRTGRAGRSGKAFTI
VTSSDTKYLAAIESMIGEKIEWHDGDLSTLAVSEEADEQPRKGRNARGKG
KEKPKEKASKPVAAETVDPAGQPQPVIENQHRREAIRSSNEERRGKPQTE
QHKRRRDRDDDGPAPVGFGNDIPAFMLIPTGV
>BR0260 site-specific recombinase, resolvase family
MNNATVANVAATYRGQLVGYARTSTTDQKAGLAAQERDLQAAGCDRIFSE
QTSAKDSKRPELQRALDHLREGDTFIVTKLDRLARSVADLVDLTGQLSSK
GVSLRILAMNLDTATPTGKLMLNLLGSIAEFERELMLERQREGIAAAKAG
GKYKGRAPTAQRQADEIIRLKDEGKTVAEIMAATKAGRSSVFSILKEAGR
TERQR
>BRA1116 IS3 family element, transposase orfB
MKFAFIDTEKAHMSLSRLCAFAGVSISGYYAWKHRLPSRRQLDDMIILAH
IRNQFALSCETYGSPRMHVELNEEGIRAGRHRTARLMRENGLKARQKMRF
KRTTDSNHGEPVAPNLLDQDFTCDGPDQKWGVDISYIWTAEGWLYLAIVV
DLYSRRIIGWEARDRMKKDLAICALKKAIAIRYPKPGLIQHSDRGSQYAS
YEYRKILKSHSMLPSMSGKGNCYDNAMVETVFKTIKSELIWRAAFQTRND
AIKAIGEYIDGFYNPVRRHSTLGYKSPVKFEAMNRNLETEALH
>BRA0362 site-specific recombinase, phage integrase family
MLTDTKLRNLKPKDKLYKVNDRDGLYVAITPAGSISFRYNYSIHGRQETI
TFGRYGVGGITLAEARERLGEAKKMIAAGKSPAKEKARDKARVKDAETFG
AWAEKWLRGYQMSETTRNMRRGTYERDLKPKFGNRKLIEITHEDLRALTD
AIVEQGRPSTAVVCREIMMLVFRWAIERGQKVENPADLVRPSTIAKFEPR
DRALTPEEIGLMYQYMERIGTPPSIRAAAKLLLLTMVRKSELTNATWSEI
NFIDALWTIPKERMKRRNPHLVFLSRQVLEIFTALKTFAGGSEYVLPSRY
DSDLPMSSATLNQVLTLTYRLAQKEGQSLGKFGPHDLRRTASTLLHEAGY
NTDWIEKCLAHEQKGVRAVYNKAEYRDQRRAMLQDWADMIDEWTIRKIRP
KD
>BRA0847 IS711, transposase orfB
MTTKLHAVVDAIGLPLRIKPTPGHYGDCPQASSLLSGLKGVGHVIADAAY
DADHLRAFIASDLKATAQIKVNPTRSSVPTIDWRLYKERHQIECFFNKLK
RYRRIALRCEKTLTAFMGFVHLACAMIWLR
>BR0729 transposase, putative
MSIRFRLSEADCITLNGIDHVLEHYDELGVILRARDASSRRLSFSHEEIM
QLLSQPDVRLERDYFAAGQIARRARCDQRYLSSLPPEARQKLLWKASYCE
AFLEAEAKHKACRTLGSISQILPALTMRVDERETICQLPAGNHKVGKPVT
RFLPPSPTALRSWIRLYERCARSPLAFLRKRRSDLSYARKLVGETEILLA
ECVSEYLSRNKPSQQMVVDRTRTRFIETNEKRALLGLPALPIPSARSVRR
RIAKLDPFEVTVRREGAEFAKRKFAFYEEGVSTSYPLERIEMDEWNIDVV
SLFGRSGALDALRPEERARFEVGRRWLYVALDCATRCIVSLRIVVNPSAE
DAIRALELITIDKTPIARAANCDSDWPYFGGIGTLVTDQGAAFASADFRS
AVCDLHGTYEAPPAGVPKLRAGIERLFGTFGAQLMPYLIGRTFSNPQERG
DYPSEQWAALTDDELAEIFTNFVVDIYHNTPHSGLGGETPANAWKRLANE
RWITPPPTLIERTVVFGVPLQRKIGRHGVLVHGIHYSCSELQQALLTGHN
RMVRVRVNPRDLTFICVEVAGEWRIAEAVSKAVTGLSLEEWQRLVFELRC
KHRGEAALSEEIIRKARKRLVSIDQRARELMRIQPDRTTAGDLEQLEKTL
FLGLRIKLSGHETEDLVPITDDLFGDVITPFQAAVDHENLTEADDQKPWE
LSDD
>BR0571 DnaA domain protein
MELLDVIHTRAQAFEALKRIAARHGRPLNPDALVRLTHRADKKRRERCIE
LCEALIDLLAASFGASGAEIRSPLRGRQEVSRIRQIGMYVAHTSLGMAMN
EVALGFARDRTTVMHACHTVEDLRDDVEFDALVSLFEKIVNSTFTAWRMA
A
>BR1474 site-specific recombinase, phage integrase family
MVRHPDINRRGDIAALRWDQRCSKTVFLDGEAKSVDGFELRQGKTGKRLL
LPITPILSEVLEATPRQGETVLVTAYGEPFSPKSLTGRMADWTPSAKLPK
GFTLHGLRKTLGKILAEGGASTRQIMDTLGHDDIAHAELYTREAEQARLA
TDGMSRVVRLKRNG
>BR1646 base-excision DNA repair protein
MSFDSIGTLCAGRMKGQAMRRIDTLSDIEAGLEALVLADRRLADIRNRSH
AVPLRRSEPGFESLASIVVAQQVSTASAAAIWARLKQVINPLTPEAYIAG
GEEAWRLAGLSRPKQRTLLALSEALAGGALDLHGLCDLPAGEAIATLTAI
KGIGPWTAEVYLLFAAGHPDVFPAGDVALQTAVGHAFAHETRPDAAALRQ
LAENWAPWRGVAARLFWAYYAAIKGREAAPLL
>BR0368 ada, ada regulatory protein
MNLMIPKTHDPDESRWQKVLDRDKASDGKFVYAVRTTGVYCRPSCPSRRG
KRENVQFFNGCEDAERAGFRPCLRCKPDLSDTLATQNNARHAEMVASACR
FIETAETQPSLEEIANVVKASPAHFHRVFKAFTGLTPKAYADAHRAGRMR
AALDMPQIRVTDAIYDAGYNSSSRFYEASDRILGMTPKAYRAGGKDADIR
FVIGQSTLGAVLVAASGKGVCAIFMGDDPQGLIHDLEKRFPKANLIGADR
NFENLVAEVVGFVEAPGIGLDLPLDLRGTAFQQRVWRALCEIPAGETVSY
TDIAERISAPRAVRAVAQACAANKIAVAVPCHRVVRNDGGISGYRWGVER
KRDLLERERKA
>BRA0533 alkB, alkylated DNA repair protein AlkB
MKDLFDNLNTREIMAPGAVLLRGFALACEESILSAVARVCAAAPFRHMTT
PGGYRMSVAMTNCGPVGWVTDRTGYRYSPADPETGKPWPSMPDTFLALAQ
DAARQAGYPDFTPDACLINRYEPGARLSLHQDKDERNFSNPIVSVSLGLP
ATFQFGGMKRTDPITKYILHHGDVVVWGGPSRLFYHGILPLKSGEHERLG
PFRLNLTFRKAF
>BR0491 babI, modification methylase BabI
MSLVRLAHELPIEAPRTAWLDSIIKGDCVSALERLPDHSVDVIFADPPYN
LQLGGDLHRPDQSMVSAVDDHWDQFESFQAYDAFTRAWLLACRRVLKPNG
TIWVIGSYHNIFRVGTQLQDLGFWLLNDIVWRKTNPMPNFRGRRFQNAHE
TLIWASRDQKGKGYTFNYEAMKAANDDVQMRSDWLFPICTGSERLKDENG
DKVHPTQKPEALLARIMMASSKPGDVILDPFFGSGTTGAVAKRLGRHFVG
IEREQPYIDAATARINAVEPLGKAELTVMTGKRAEPRVAFTSVMEAGLLR
PGTVLCDERRRFAAIVRADGTLTANGEAGSIHRIGARVQGFDACNGWTFW
HFEENGVLKPIDALRKIIREQMAAAGA
>BR0001 dnaA, chromosomal replication initiator protein DnaA
MKMDSAVSEEAFERLTAKLKARVGGEIYSSWFGRLKLDDISKSIVRLSVP
TAFLRSWINNHYSELLTELWQEENPQILKVEVVVRGVSRVVRSAAPAETC
DNAEAKPAVTPREKMVFPVGQSFGGQSLGEKRGSAVVAESAAATDAVLGS
PLDPRYTFDTFVDGASNRVALAAARTIAEAGSSAVRFNPLFIHASVGLGK
THLLQAIAAAALQRQEKARVVYLTAEYFMWRFATAIRDNNALSFKEQLRD
IDLLVIDDMQFLQGKSIQHEFCHLLNTLLDSAKQVVVAADRAPSELESLD
VRVRSRLQGGVALEVAAPDYEMRLEMLRRRLASAQCEDASLDIGEEILAH
VARTVTGSGRELEGAFNQLLFRQSFEPNISIDRVDELLGHLTRAGEPKRI
RIEEIQRIVARHYNVSKQDLLSNRRTRTIVKPRQVAMYLAKMMTPRSLPE
IGRRFGGRDHTTVLHAVRKIEDLVGADTKLAQELELLKRLINDQAA
>BR0450 dnaB, replicative DNA helicase
MAEAAVRKLDDARDQKDVRYREAPHNIEAEQALLGAILINNDAFYRVSDF
LKPTHFLEPLHRRIYEIATDLIRVGKMANPVTMKTFLPTEGKVGDLSIFQ
YVTRLATEAVTIINAEDYGRAIYDLATRRALIGIGEDMVNIAYDAPVDMA
PQEQIEDAERRLFELAETGRYDGGFLPFKDAVTTAVDMANAAFMRDGHLS
GISTGIHALDSKMGGLQPSDLIILAGRPGMGKTSLATNIAFNIANAYEPD
QQADGTIKAANGGVVGFFSLEMSAEQLATRIISEQTEVSSSKIRRGEITE
TDFEKLVACSQVMQKIPLYIDQTGGISIAQLAARARRLKRQRGLDVLVID
YVQLMTGSSKASAQNRVQEITEITTGLKVLAKELNVPIIALSQLSRQVES
RDDKRPQLSDLRESGSIEQDADVVLFVFREEYYVKNLEPRDEFDPKYEEW
KQHFEKVRGTADVIIAKQRHGPTGTVKLAFQSEFTRFADLADGSYLPEQY
E
>BR0069 dnaE-1, DNA polymerase III, alpha subunit
MVPYFEMAAASNFSFLCGASHPQELVERAHALDLSGIGIADRNTLAGVVR
AHAQWKDIRKESGFRLFIGCRLSFIDGTPDMVVYPRDRAAYGQLCRLLTE
GKHRAAIKGECHLEWADLLFRARQFQIAVFPPDEDEPDFAARLTEIAQAA
PGSVWLALTMPHQGQDGRRAERIARFAAQAGVPLIATNDVLYHHPDRRPL
QDVLTATRHHTTVFAAGRLLEKNAERHLKPPHEMVRLFRDYPEAIAATAD
FVAPITFQLDELKYAYPDEPIPPGKTAQQHLYDLVWEGAARHYGADIIPP
KVQGLINKELALIARLEYEPYFLTVYDIVTHAREKGILCQGRGSAANSVV
CFCLGITGVNPTQVDLLFERFISAERKEPPDIDVDFEHERREEVMQYVYD
RYSRDRAAIVATVISYRSRSAIRDVGKALGLSEDVTAALANTVWGLSGGG
IDRQHIRQAGLDPDNPIIQRAVELAITLIGFPRHLSQHVGGFVLARDRLD
ETVPIGPAAMDKRSFIEWDKDDIDEVGLMKVDVLSLGMLTCIRKAFDLIH
QHKPQLYGGEKLTLASLPREDKAVYDMLCKGDSLGVFQVESRAQMNMLPR
LRPQEFYDLVIEVAIVRPGPIQGDMVHPYLRRRSGQEPCTLPSPSPQHGP
ANELQQILGKTKGVPLFQEQAMRIAMEAAKFTPEEANQLRRAMATFRKMG
TIHTMEKKMIDGMVNRGYDRTFAENCFNQIKGFGEYGFPESHAASFAHLV
YISAWLKCHHPEVFAAALLNSQPMVFYAPAQIVRDAREHGVTVLPVDVNF
SQWDNILEETPDVHLALRLGFRQIDGFSKRDTELLIADRQEPYRTIEDMH
RRLRLDRRAFTLLADADAFGSLDIDRRAALWAVRRLPNDETLPLFRAAAA
SELAQEPRTKLPEMAASEHVIADYETTRLSLKGHPLQYLREGLAAEGVST
CRAVQEGADGRRMKVAGVVTVRQRPGSAKGVVFLTIEDETGIANIVIWPK
IMKVFRREVMSARLIHIEGRIQRSLEGVVHLVAAKLQDRSAALIEMSGRE
AQRLIAPSQMAHHPRNVRVMPNSRDFH
>BR0825 dnaE-2, DNA polymerase III, alpha subunit
MNDTVAGNAASGSSATPGFVHLRVHSAYSLLEGALPLGKIIKQALADEAP
AIAVTDTNNLFGALEFAQKASKDGVQPIIGCQLDVAFGDHNDNSRSVNRK
LALDLAPLVLIAATEAGYANIVRLVSRAFLDTPAGDPIHIEAGWLPALSE
DVIALTGGPLGPIGRSFTADRADRARARLAFLKETFGNRLYVELQRQAGY
DRTVEASTVELAYEMDLPLVATNEAFFLKAEDFEAHDALLAIAEGQILSN
DDRRRLTPDHCLKSRAEMAELFADLPEALENTVEIAGRCSWYTQTRKPIL
PRFTGESDDPEAAVQAEADELARQAREGLKKRLETAGLAEGYTPEQYAER
LEYEIGIITRMKFPGYFLIVADFIKWAKAHGIPVGPGRGSGAGSLVAYAL
TITDVDPLRFSLLFERFLNPDRVSMPDFDIDFCQDRREEVIRYVQEKYGR
DQVAQIITFGTLQARAVLRDVGRVLEMPYGQVDRLCKLVPQNPANPVSLA
QAIESEPKINEEREKEPVVGRLLDMALKLEGLYRHASTHAAGIVIGDRPL
SELVPMYRDPRSDMPVTQFNMKWVEQAGLVKFDFLGLKTLTVLQTAVKLV
ARKGIDIDLSHLPLDDALTYEMLSRGETVGVFQVESAGMRKALLGMKPDR
VEDIIALVALYRPGPMENIPTYNARKNGEEEIASIHPKIDHLIKETQGVI
VYQEQVMQIAQVLSGYSLGEADLLRRAMGKKIREEMDKQRVRFVDGAVER
GVDKAQANMIFDLLAKFADYGFNKSHAAAYAIVSYQTAYIKAHYPVEFLA
ASMTYDMSNTDKLNDFRREANRLGIEVVPPSVKTSFRPFEVGEKKIFYSL
AAIKGVGEAAVDHIVDVRAEKQFESLEDFCERIDPKIINRRVLESLINAG
AMDCFGRDRAAMCAGMDRILGFAQRTQENAVSGQSDIFGLSGAPRETLIL
PPTAPWLPSEMLHREFQAVGFYLSAHPLDEYRDVLNRMRVQSWADFSAAV
KRGASAGRLAGTVTARQERKTRTGNKMGIVQLSDASGQFEAVLFSEGLAQ
YRDLLESGKSVVITVQAENRPEGIGLRIQTVQSLEDEACRMQKAMRLYLR
SADAVRHIAPHFNTRGDGQVSLIVIKDNGQREVEIELPHRYRVSPQIASA
MKAIQGVVEVELV
>BR1480 dnaG, DNA primase
MRFPPSFLDEIRDRVPISTLIGTRVSFDRKKSNPPKGDFWACCPFHGEKT
PSFHCEDRKGRYHCFGCGVTGDHFKFLTDLEGLSFPEAVERVADMAGVPM
PARDPEMEKREAQRATLYDVMELAAQFFESQLQSATGAKARAYLRDRGLS
TATQQAFRMGYAPESRNALKEFLAGKGVSREQIEACGLVVHGEGIAVSYD
RFRDRVMFPIEDLRGRIIAFGGRALSADAPAKYLNSPETELFHKGRVLYN
GSRARKACQPQGGEPAKPIIAVEGYMDVIALAQAGIHHVVAPLGTALTEE
QLELLWRISPEPILCFDGDGAGLRAAYRAADLGLPVLQPGKSLRFALLPE
GQDPDDLVKAEGPSAFHAVLRDARPLVEMVWTRETAGGVFDTPERRAELE
ARLREITSRIANEDIRRHYSQDMRERAQAFFGQGRQGFQNGGQRSQSFTR
RNEGARGRGGPAGSGRLAISDSLARSTLVKGGRQGGATHAPLRETAIVLT
LLNHPRLIEEDFETLAALDLGHDALKTLHLAMLDVLAAGRVDDGIAMRRA
LVDAGHGDLIKMLEQVVKGAKLWTATTLAAEDDAREALRQALHLHQRART
LHKELRAVEAALETDETGELFARLRDIQNQILKADATEALIDGFGLSSGR
PHGGF
>BR0002 dnaN, DNA polymerase III, beta subunit
MRLIDKGRLPLGCSRPGPSERVRFKMRVTLERSNLLKSLNHVHRVVERRN
TIPILSNVLLQAEGASLAMKATDLDLEVNEATAAMVEQAGATTVPAHLLY
DIVRKLPDGAEVMLSTNPDGGSMSVISGKSSFRLQCLPQSDFPELTAGAF
THSFRIEAQALKRLIDRTQFAISTEETRYYLNGIFFHAIESDGALKLRAV
ATDGHRLARAELEAPSGTEGMPGIIIPRKTVAELQKLVDVPDVVVTVELS
DAKIRFTVGSVVLTSKLIDGTFPDYQRVIPSGNDKKLTIDRQDFAASVDR
VSTISSERGRAVKLSIADGQLTLTVNNPDSGSATDELAADYDGDPLDIGF
NSKYLLDITGQLSGTDAVFMLADAGSPTLVRDTGDEDVLYVLMPMRV
>BR2071 dnaQ, DNA polymerase III, epsilon subunit
MREIVFDTETTGLERLEDRVIEIGGVELVNRFPTGRTFHKFINPQGRQVH
PDALAVHGISNEQLLDKPVFAEILDEFLEFIDGARLVAHNAMFDLGFINA
ELARLDQAEITSEHIVDTLALARRKHPMGPNSLDALCKRYGIDNSHRTLH
GALLDAQILAEVYIELIGGKQTALGLTMESGSAGGDSRGNGSAPVVLAAR
PRPLPPRISDAERAAHAALVEKMGDKAVWKKYLS
>BR0034 dnaX, DNA polymerase III, gamma and tau subunits
MDTQSADGAYRVLARKYRPQNFDDLIGQEPMVRTLRNAFETGRIAQAWML
TGVRGVGKTTTARILARALNYKTDTVDQPTIDLSTPGEHCQAIMEGRHVD
VIEMDAASHTGIDDIREIIEQVRYRPVSARYKVYIIDEVHMLSTAAFNGL
LKTLEEPPPHVKFIFATTEIRKVPITVLSRCQRFDLHRIESGTLAQHLRR
IAEAEKIEVDDASLAMIARAGEGSARDSLSIFDQAIAHGAGSVTAEAVRS
MLGLADRARIIDLFEMLMRGDVAGALTEFRAQYDVGADPSVVLTDLADFN
HLVTRLRFTPDVAEDVSLSEDERVRGREFAQTLSIRALSRTWQMLLKGIA
EVDTATRPVQAAEMLLIRLAHAADLPTLDEAIRGLDNGSVSAPRPQPSAT
PRPNGGSAPQAHGAADAVGSSALAPAAGGPATAMRIVETPPIQVSAPKPS
EAAPQPSVPINSLQDIVALADKYRDMQFKILVKNCVRPASIAPGRLEIGL
TDDAPKSLPSDIAQHLLNWTGIRWVVTVARDVAGQTIAEAEAERRDNLVT
DARADPDVAAILAAFPGAKIIDVRIAVPDKSEDEDIDLDAVAEVPDVLPE
DD
>BR1097 gyrA, DNA gyrase, A subunit
MNGGPNGGPSGIEPISIIEEMQRSYLDYAMSVIVSRALPDVRDGLKPVHR
RILHAMNEMNLAYNRPYRKSAGVVGEVMGKYHPHGDASIYDALVRMAQDF
SMRDPLIDGQGNFGSIDGDPPAAMRYTECRLEKVTESLLSDIDKDTVNFQ
DNYDGREQEPVVLPARFPNLLVNGSGGIAVGMATNIPPHNLGEVIDGCVA
LIDNPAIELSELMELIPGPDFPTGGIILGRNGINSAYTTGRGSVIMRGRA
TIEPMRGDREAIIITEIPYQVNKASMIEKMAELVRDKRIDGISDLRDESD
REGYRVVVELKRDAVADVVLNQLYRYTPLQTSFGCNMVALNGGKPEQLTL
LDMLRAFVAFREEVVTRRTKFLLNKARDRAHVLVGLAIAVANIDEVIALI
RRAPDPATAREQLMERRWPAVDVAPLIRLIDDPRHTLNEDNTYNLSEEQA
RAILDLRLQRLTALGRDEVADELNKIGEEIRDYLDILGSRLRVMNIVKEE
MIAVRDEFATPRRTEIGFGGAEMDDEDLIAREDMVVTVSHAGYIKRVPLT
TYRAQRRGGKGRSGMATKEEDFVTRLFVANTHTPVLFFSSRGIVYKEKVW
RLPVGTPQSRGKALINMLPLQQGERITTIMPLPEDEDFWANLDVMFSTTR
GTVRRNKLSDFVQVNRNGKIAMKLEDEGDEILSVDTCTEFDDVLLTCAGG
QCIRFPVTDVRVFAGRNSIGVRGINLAEGDKVISMAILHHVDATPAERSA
YLKRSIAERRAQGADDADDIVVVGEDVDAEAELSEDRYQELKAREETVLT
VSEFGYGKRSSSYEFRISGRGGKGIRATDTSKTDEIGKLVALFPVEGSDQ
ILLVSDGGQLIRVPVDGIRIAGRSTKGVTIFNTADGEKVVSVERISDADS
DEENGNGGDAAPEGDTPAATQE
>BR0125 gyrB, DNA gyrase, B subunit
MPEMNSEAPAEYGADSIRVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEV
VDNAIDEALAGHATLVTVTLNADGSCTVTDNGRGIPTDIHKEEGVSAAEV
IMTQLHAGGKFDQNSYKVSGGLHGVGVSVVNALSIWLKLKIRRAGKIHEM
SFTHGVADAPLVVTGDAGSETGTEVSFLPSPDTFSMVEFDYETLERRLRE
LAFLNSGVRIKLADRRHADVKEQELHYDGGLVEFVKYIDQSKKSLLEEPI
YIRSEKDGMTVEVAMWWNDSYHEKVLCFTNNIPQRDGGTHLAGFRGALTR
QITGYADSSGMTKKEKVQLTGDDCREGLTAVLSVKVPDPKFSSQTKDKLV
SSEVRPVVEGLVNEALSTWLEEHPAGGKIVVEKVIQAAAAREAARKARDI
TRKSNLSVTSLPGKLADCQERDPAKSEIFIVEGDSAGGSAKSGRSRQNQA
ILPLRGKILNVERVRFDRMISSDQVGTLITALGTSIGKDETHGFNADKLR
YHKIIIMTDADVDGAHIRTLLLTFFFRQMPELIERGHIYIAQPPLYKVTR
GKSSQYIKNEAAFEDFLIETGLEETTLELVTGEMRAGPDLRSVVEDARML
RQLLHGLHTRYDRSVVEQAAIAGLLNPDASRDNATAQHSADTVAKRLDMI
SEETERGWSGHVMEDGGYRFERMVRGVKDIAILDMALLGSADARQVDRVA
GRMAEIFMEPPVLRRKDKVESLSGPVALLDAVFATGRKGLTLQRYKGLGE
MNAEQLWETTLDPNVRSLLQVKVNDATDADSLFSRLMGDEVEPRREFIQD
NALNVANLDV
>BR0778 himA, integration host factor, alpha subunit
MGGKTVTRADLAEAVYRKVGLSRTESAALVEMILDEVCDAIVNGETVKLS
SFATFQVRDKNERIGRNPKTGEEVPILPRRVMTFKASNVLKQRILQEHQK
RQGKTSK
>BR0153 ihfB, integration host factor, beta subunit
MIKSELVQIIASRNPHLFQRDVENIVGAVFDEITNALAEGNRVELRGFGA
FSVKNRPARSGRNPRTGETVDVEEKWVPFFKTGKELRDRLNGAV
>BR1420 ligA, DNA ligase, NAD-dependent
MSDISVEKLTELEAAAELERLARAIAHHDELYHAKDRPEISDAAYDALKR
RNEAIEAHFPALVRDDSPSRRVGAAPALATFAPVVHARPMLSLDNAFSDE
DVRDFVGSVYRFLGQLPDDSIAFTAEPKIDGLSMSIRYENGILVSGATRG
DGTTGENVTANIRTIAEIPNRLPAGAPAVVEVRGEVYMAKSDFLTLNAQM
EAEGKQTYVNPRNTAAGSLRQLDAKVTASRKLRFFAYAWGEMSDMPADTQ
LGMVEVFRQWGFPVNPLMKRFNSVDGLLAHYRAIGMERPTLDYDIDGVVY
KVDRLDLQTRLGFRSRSPRWAIAHKFPAEQALTILRGIDIQVGRTGALTP
VARLEPITVGGVVVTNATLHNEDYIKGIGQKGEPIREGRDIRIGDSVIVQ
RAGDVIPQIVDVVLEEGKKRGEPYQFPHVCPACGSHAVREEGEAVRRCTG
GLICPAQAVERIRHFVSRNAFDIEGLGEKQVEFFFNAEDPALCIRSPADI
FTLKKRQENSLTKLQNIEGFGATSVKKLYDAIDARREIALHRFLFGLGIR
HVGEVNAKRLARAYLSYAAFEKAALEAVPPKEGDRTDKGSEAWQDMLAVE
GIGSIVAEAVVDFYGEPHNREVLAALLAEVTPLDEEARVATGSPVEGKTV
VFTGSLERMSRDEAKAMAERHGAKTAGSVSKKTDLVVAGPGAGSKLAKAT
ELGIEVINEDDWFKLVGED
>BRA0579 mfd, transcription-repair coupling factor
MYIVRDGQRIADLEQVLGFVSPDLPVLHLPAWDCLPYDRVSPGADAAARR
LAALSALCALKKAPHPAVILTTANAVLQKLPPQAALGEQVISARPGNQLD
MNDLAARLERNGFERVSTVRDIGEYAVRGGILDLYAPGAEEPLRLDFFGD
TLETIRAFDPASQRTTGTRKEFVLQPMSEITLSSDMISRFRKNYVATFGA
PQRDDALYQAISEGRRFAGMEHWLPLFYDNLETVFDHAGPMPVVFDHLVH
EALTERHTMVVDHYEARLRQAEGKEAGSDAVPYKPVKPEMLYLTPGQVEE
AAEAAGLRIDLTPFGAPEVSGRTIIHADVHKGRSFAEERAATDVNLFEAV
VKHIADLRASGKKVLVAAWTEGSLDRLCQVLDEHGLEKIETVDRLSTVKA
LSRDKVTAAVLAVESGFDAGDLVVVAEQDILGDRLIRRSRRRKRDQDFIS
EVASLTAGDIVVHVDHGIGRFIGLKTITAAGAPHDCLEIHYAGDDRLFLP
VENIELLSRYGLEGSDAVLDKLGGGAWQARKAKLKKRLLEIAGHLIQIAA
ERQMRGAPVMTPPDGLYAEFAARFPYDETDDQLTAIEAVADDLAQGKPMD
RLICGDVGFGKTEVALRAAFIAAMSGVQVAVVVPTTLLSRQHFKTFSNRF
HGLPINVAHASRLVGAKELAATKKGLEEGTVDIVVGTHALLGSSIKFKNL
GLLIIDEEQHFGVKHKERLKELKSDVHVLTLSATPIPRTLQLALTGVREL
SLITTPPVDRMAVRTFVSPFDPLVIRETLLRERYRGGQSFYVVPRIADLT
DIEEFLKEHVPELKVAVAHGQMAPGVLDDIMNAFYDGQYDVLLSTTIVES
GLDIPTANTMIVHRADMFGLAQLYQLRGRVGRSKQRAFALFTLPAGKMLT
QMAERRLKVLQSLDTLGAGFQLASHDMDIRGAGNLLGEEQSGHIKEVGFE
LYQQMLEEAVATLKGSGEVEDSQWSPQIAIGTAVMIPEAYVPDLQLRLGL
YRRLADLEEPQDIDAFGAELIDRFGPMPDEVQHLLKIVYIKALCRRANVE
KLDAGPKGVVIQFRHATFNNPVGLVKMIGEQGSMAKIRPDQSIVFIRDWP
TPEKRLNGSAVIMTQLAKIAAA
>BRA0218 mutL, DNA mismatch repair protein MutL
MTIRHLSETIINQIAAGEVIERPASVIKELVENAIDAGATRIEVVTAGGG
KTLLRVTDNGSGIPADELALAVSRHCTSKLTDDVHDIRALGFRGEALPSI
GSVSKLTLKSRPQDADSGFEVCVTGGHLDGPRPTALNRGTIVEVRDLFYA
TPARLKFMKTDRAEATAITDVVKRIGIAFPHIRFSLAGTDRTPFEMPATG
TGAEATLERIGQVLGREFGENALAIDAERDGVRLAGFVGIPSFNRGNALH
QFAYVNGRPVRDKQIFGALRGAYSDVIARDRHPVAVLFLTLDPALVDVNV
HPAKADVRFRDPGLVRGLIVGAIKQALAQSGIRPATSGAEAMLQAFRAEG
FGAQQSAPRPANSYSPASWRTAPPAPRSEWSPQTAHPAHRPLDLQAAPAL
RENGQAVLGDVAVPAADARASVAEAPVELMQKPLGAARAQIHENYIVAQT
EDSLVIVDQHAAHERLVYEALKNALHARPIAGQMLLIPEIVDLPEEDAQR
LAGHAETLARFGLGVEQFGPGAIAVRETPAMLGEMNVQQLIRDLADEIAE
HDTADGLKAMLHHVAATMACHGSVRSGRRLKPEEMNALLRDMEATPGSGT
CNHGRPTYIELKLTDIERLFGRR
>BR2183 mutM, formamidopyrimidine-DNA glycosylase
MPELPEVETVRRGLQPFMEGATVVRVEQNRPDLRFAFPENFAERLSGRRI
EALGRRAKYLTVHLDDGLSIISHLGMSGSFRIEAEDAQGLPGGFHHERSK
NSLHDHVVFHLMRPDGASARIIYNDPRRFGFMLFAEKGALEEHPLLKDLG
VEPTGNLLSGEVLAALFKGRRKPLKAALLDQRLIAGLGNIYVCEALWRAG
LSPMRAAGSVAGEMDVMERLAGAIRSVIAQAIAAGGSSLKDYIQADGALG
YFQHSFSVYGREGKPCRNPACGGTVERVVQSGRSTFFCASCQT
>BR0147 mutS, DNA mismatch repair protein MutS
MEAKVEEKEPEPVENAGPDAPVRLTPMMEQYIEIKAANVDSLLFYRMGDF
YELFFDDAVAASAALGITLTKRGKHLGEDIPMCGVPVHAADDYLQKLIAK
GYRVAVCEQVEDPAEAKKRGSKSVVKRDVIRLVTPGTLTEEKLLDPAQAN
FLMAMGRTRGDGALALAWIDISTGTFRVAETTPDRLFADIMRVDPRELVV
ADSAFHDEELRPVFDLIGKAVTPQPATLFDSAAAQTRIQHYFNVATLDGF
GQFSRPELSAISGAIAYIEKTQISERPPLMRPEREHEGGTLFIDPATRAS
LELARTMSGNRDGSLLKAIDRTVTGGGARLLAERLTAPLTSPKEIALRLD
SVSWCLSEQTLCEALRLELKGVPDMPRALSRLAVGRGGPRDLGALACGFE
AAGGIASLLDGALLPDELAAAREAIEKMPAGFAAHLDRALADELPLLKRD
GGFVREGYNSELDEMRALRDQSRRVIAGLQADYIEETGIKSLKIKHNNVL
GYFIEVTANNSGAMTDTDEAKSRFIHRQTMANAMRFTTTELAELESKIAN
AADRALSIELAIFEELTAEAVAHADSIRAAASALSVFDVSTALAVLAEER
GYCRPHVDDSLSFNIVAGRHPVVEQALRRQAANPFVANDCDLSPQRDGGD
GAIWLLTGPNMGGKSTFLRQNALIAILAQMGSFVPAGSAHIGVVDRLFSR
VGASDDLARGRSTFMVEMVETAAILNQAGEHSLVILDEIGRGTATFDGLS
IAWAAVEYLHEKNRCRALFATHFHEMTALSEKLERLSNVTMRVKEWDNDV
IFLHEVAKGAADRSYGVQVARLAGLPEAVVNRARDVLHQLEAGETSGKAD
RLIDDLPLFSVMLQQEKPKPQIQAKDSELANAVAAISPDELTPREALDLI
YKLKELAGKA
>BR0493 mutY, A/G-specific adenine glycosylase
MDPTTFLLRWYDRHHRVLPWRVTPVDAAKGDVADPYRVWLSEIMLQQTTV
EAVKSYFLRFIERWPTVRAMAKASEDDILRAWAGLGYYSRARNLKKCADI
VVAEHGGEFPKSAAGLKELPGIGDYTSAAIAAIAFGEQVAVVDGNVERVI
SRLYAIDTPLPVAKAQICALMGQMTPPDRPGDFAQAMMDLGATICTPRRP
ACALCPLNKGCIALCERDPEDFPVKAPKAEKPVRTGAAFIAIAGDGSVYL
RKRKGEGLLAGMTEVPGSGWTARIDGDATVNAAPFSAAWTPSGTITHVFT
HFELRLSVYRASNVRKQAANEGWWSTPEELCGEALPTVMKKAIAAAIPDA
FKRGRKSR
>BR0166 nth, endonuclease III
MQETKIKSAVNGSTSPVRRPRRVAGTLYTADEIHEIFRRFSIQRPEPKGE
LEHVNAFTLLVAVVLSAQATDAGVNKATRALFAVADTPQKMLALGEEKVG
EYIRTIGLWRNKAKNIILLSEALIRDYGGEVPGDRDELVKLPGVGRKTAN
VVLNMAFGQPTMAVDTHILRIGNRIGLAPGKTPEAVEAILVRVIPREYML
HAHHWLILHGRYVCKARKPECEKCVIADLCKYPAKTCDIPAALVPLAP
>BR0185 ogt, methylated-DNA--protein-cysteinemethyltransferase
MESFGITVFETPIGPRGIAWRGSKIVGVEIGEADEKETRHRLRERFAGGE
YAEPPAFIRQTIEKVRALLDGASPDFSDTPLALDSVPDLNRRVYEIILEL
KPGETTTYGAIARRLGDVSLSQAVGYALGKNPFPIIVPCHRVLGSNGKVG
GFSAAGGTATKLRLLNIERARTTSEPDLFGGLPLQERPQTGW
>BR0754 parC, DNA topoisomerase IV, A subunit
MGKSLIPPGDGEEHIERVDLKSALEERYLAYALSTIMHRALPDVRDGLKP
VHRRIMHAMRLLRLNPDQAYAKCARIVGDVMGKFHPHGDASIYDALVRLA
QDFAVRYPLVDGQGNFGNIDGDNAAAMRYTEARMTEVATLLLEGINENAI
DFRPTYNEEDEEPIVLPGAFPNLLANGSAGIAVGMATNIPPHNVAELCSS
ALYLINHPDAPVEELVTSPEQWAEIEQESKTDPAALLKCKVRGPDFPTGG
ILVEEHGNILEAYRTGRGAFRVRARWHKEEGNRGTWVIVVTEIPYQVQKS
RLIEKIAELLLAKKLPLLDDIRDESAEDIRIVLEPKNRTVDPELLMESLF
KLTELESRVSLNMNVLSHGKVPNVLSLGAVLREWLEHRKEVLVRRSQFRL
AEIEKRLEILGGFLIAYLNLDEVIRIIREEDEPKQELMRAFELTDVQAES
ILNMRLRSLRKLEEFEIRKEFDDLTAEKTDLEGLLASGTRQWKKISTEIK
AVREKFGPTTRLGKRRTTFAHAPTHDLEDIHQAMIEREPVTIVVSEKGWL
RAMKGHLADFSTLSFKEGDKLKLAFHAETTDKLLFFTTGGKFFTIGANTL
PGGRGHGEPIRILVDMENDQDILTAFVHDPSAKLLLVSHEGNGFIVPESE
AVANTRKGKQVMNVKAPDEAKLCQRVSGDHIAVVGENRKMLVFPLSDIPE
MTRGKGVRLQKYKDGGVCDVRTFAIADGLSWQDSADRTFNRSKEELVEWI
GARASAGRLVPKGFPRSGKF
>BRA0591 parE, DNA topoisomerase IV, B subunit
MDDSNDLFSRVVNNARERQMERQTGENTVAQPVVQPAPSAPKPVPAAAKA
PPAASGGDDYNASSIRVLEGLEPVRLRPGMYIGGTDEKALHHLFAEVIDN
SMDEAVAGHANFIEVTVDKEGFVTVSDNGRGIPVDKHPQVPGKSTLEVIM
TKLHAGGKFDGKAYETSGGLHGVGVSVVNALSDVLEVEVARNRRLYRQCF
SRGIPQGGLEELGEVHNRRGTRVRFHPDPEIFGKNAHFDPHRLYRMARSK
AYLFGGVEIRWNCDPSLLDPKKETPEKAVFHFPGGLKDYLEASLGKEHQV
TREVFAGRTEKQGGHGAVEWAVAWFGGDGFVHSYCNTIPTGDGGTHEAGL
RIALTRGLKAYAELTNNKRASIITTDDVMVSAAGMLSVFIREPEFVGQTK
DKLATVEAQRLVENAIRDPFDHWLAASPQEASRLLEWVIDRADERLRRRQ
EKETVRKSATRKLRLPGKLADCTQNAAAGAELFIVEGDSAGGSAKQARNR
ANQAILPLRGKILNVASAGREKLTANQQIADLVQALGCGTRKNYREDDLR
YDRVIVMTDADVDGAHIASLLITFFYQEMPELIRNGHLYLAVPPLYRLSQ
GGKTAYARDDAHKEELLRTVFTGRGKIEIGRFKGLGEMRADQLKETTMDP
AKRTLLRVQVDEEYGDETRNTVDDLMGTKPEARFRFIQDRAAFVEELDI
>BR0123 polA, DNA polymerase I
MKKGDHLFLVDGSGYIFRAYHALPPLTRKTDGLPVGAVSGFCNMLWKLLK
DARNTDVGVVPTHFAVIFDYSSKTFRKEIYPDYKANRTAPPEDLIPQFGL
IRQATRAFNLPCIEKEGFEADDLIATYARLAEKAGGDVTIISSDKDLMQL
VTPSVSMYDSMKDKQISIPEVIEKWGVPPEKMIDVQSLTGDSTDNVPGIP
GIGPKTAAQLLEEFGDLDTLLARASEIKQNKRRENILAFADQTKIARELV
TLKTDVPLDIDLDGLVLEPQNGPKLIGFLKAMEFTSLTRRVAEATDTDAS
SVEPCHVETDWGADAHGPDVDVPEKADAAAASQLLSAPTAAEPDQGYTPK
ALAEGRAAQAIAQKIDTSAYVCIRDIATLEQWLAEAAETGILAFDTETTS
LDPMQAELVGFSLALAPGKAAYVPLQHKSGAGDLLGGGMVENQIPLDMAL
AALKRVLEDASILKIAQNMKYDWLVMRRHGINAVSFDDTMLISYVLDAGT
GSHGMDPLSERWLGHTPIAYKDVAGSGKSAVTFDMVDIDRATAYAAEDAD
VTLRLWQVLKPRLAAEGLMSVYERLERPLVDVLARMEERGIAVDRQVLSR
LSGDLAQAAAAYEDEIYALAGEKFTIGSPKQLGDILFGKMGLPGASKTKT
GQWSTSAQVLEDLAAEGHPLPRKIVDWRQLTKLKSTYTDALPGFINPQTK
RVHTSYAMASTSTGRLSSSDPNLQNIPVRTAEGRKIRTAFIAEPGNKLIS
ADYSQIELRVLAHVADIAQLKQAFADGIDIHAMTASEMFGVPVEGMPSEV
RRRAKAINFGIIYGISAFGLANQLSIPREEAGQYIRTYFERFPGIKDYME
ATKAFAREHGYVETIFGRRAHYPDIRASNPQVRAFNERAAINAPIQGAAA
DIIRRAMIRMEDALAKENLAARMLLQVHDELIFEVPENEVEKTIPVVRRV
MENAAMPAVSLAVPLRVDARAAHNWDEAH
>BR1804 priA, primosomal protein N
MSKDSHDIANPMSGLFPELAPRVVPVLVPMPAERPYSYMVPPGMNVQPGS
IVRVPLGPREVAGIVCEGETDAVDSRKLREISEVFNCPLVGPEMLRFMRW
AADYTLSPPGMVARMVLRVPAAFDPEPAVPGLRYRAGEPERMPERMTAAR
ARVMELARDGLAWTRSGLAHAAGVSLTVVDGLKAQGIFEEIMLPPPAVVA
KPDTDYARATLSQDQQAAAEMLSEAVEAGGFSVSLLDGVTGSGKTEVYFE
AVAKALDAGRQVLILLPEIALTQQFLDRFHDRFGAKPAEWHSDLAPRTRE
RVWRQVAEGTVRVVAGARSALFLPFKELGLIVVDEEHDPAYKQEDRVFYN
ARDMAVVRGHIGSFPVVLASATPSIESQVNAEQGRYKRIKLYGRYAEAAL
PDLKTIDMRRSPPPPGRFLSPALTEAVGKTVERGEQALLFLNRRGYAPLT
LCRVCGHRFQCPQCSSWLVEHRFRGQLMCHQCGYHEPVPQACPECGTLDH
LVACGPGVERIAEEVAATFNDARIIVLSSDMAGGVKRLRLELDAIAKGET
DIVIGTQLVAKGHNFPNMTLVGVVDADLGLANGDPRAAERTFQLLNQVTG
RAGRTGRKSLGLIQTYQPDHPVMRAIVSGDADAFYAREIEERERSNLPPF
GRLAALIISADNRPDAENHARALRRCAPSSREISVLGPAEAPLALVRGRH
RFRILVHGTKRADIQGFIRALLAAAPKEKGSIRVQVDIDPQSFL
>BR1283 radC, DNA repair protein RadC
MAKKKDTPGDGEFPGFSDTLQRTPKLEKPHYAGHRDRLKQRFRDAPDALA
DYELLELLLFRAIRRADTKPIAKALLNRFGSIAEVLAAPENLIAEIPGAG
PTVALELKLVEAIAKRSARSTVMEREVLGSWDKVINYCTAAMAFETREQF
RILFLDKKNKLIADEVQQTGTVDHTPVYPREVVKRALELSATAIILVHNH
PSGDPTPSRADIDMTKQLVNAAKALNITVHDHVIIGKHGHASLRSLRLI
>BR1202 recA, recA protein
MSQNSLRLVEDNSVDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIET
VSTGSLSLDIALGVGGLPKGRIVEIYGPESSGKTTLALHTIAEAQKKGGI
CAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAID
VLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSISRSNCMV
IFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIKERDEVVG
NQTRVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGA
WFSYNSQRLGQGRENAKQYLKDNPEVAREIETTLRQNAGLIAEQFLDDGG
PEEDAAGAAEM
>BR0003 recF, recF protein
MEAKDHIERRPDRVSIRRLKLVNFRNYAELSLPLGPGHVVLTGENGSGKT
NLIEAISFLSPGRGLRRAAYDDVARANAEGGFAIHAALDCMIYGDAEIGT
GTAGGGEGGRKVRINGIAASADDLLDYARILWVVPSMDGLFTGGASDRRR
FLDRMVLAIDTAHGKRVLDYEKAMRSRNRLLNDGSNDDQWLDAIENQMAE
LGTAIAAARAQAMRLIAAMIERLPAEGPFPKADCFLEGALESRIGVEAAL
DLEEDFRRTLRDGRARDRAAGRTLDGPHRTDLIVQHRPKSMPAALCSTGE
QKALLIGLILAHARLTAELSGMAPILLLDEIAAHLDMGRRAALFGILDEL
GGQAFMTGTDRALFDALAGDAQFFNVSAGQLTGI
>BRA0581 recG, ATP-dependent DNA helicase RecG
MFDPMRPSMLDPFFASVRSLSGIGPKVAVLLGKLLGTDVPGGEPKIGQLL
FLPPHSIIDRRNRPGIAFAQEGAIVTLEVTVDQHQPAPKGRGNVPHRVFA
HDDTGEIALTFFHAQLPWLQKMLPEGETVIVSGKVEWFNGRASMVHPDYI
ASMDDAASLPLVEPVYPLTAGLSPKTLGRAIKEALTRVPVLPEWIDAPLL
AREGFPAFQQALNTLHQPEDPGDIALESITRRRLAYDEFLAGQLALALVR
AKTRRLSGRPLEGTGNIVAEIMRHLPYRLTKAQEQAVREIITDLKSPQRM
LRLLQGDVGSGKTVVGLLSMAHAAESGGQSALMAPTEVLARQHFATIAPL
AEKAGLKAALLTGREKGRERNAVLEGLKSGEIDIVIGTHALFQEKVEYHD
LVFVIIDEQHRFGVHQRLMLTAKGSAPDMLVMTATPIPRTLVLTAFGDMD
VSKLTEKPVGRQPITTAIVPMERMGELVERIRKAVSEDQKIYWICPLVEE
SEVVELTSAEERFESLKSVFGERIGLIHGRMSGAEKDEAMRAFKQGETRL
LVATTVIEVGVDVPDATIIVIEHAERFGLSQLHQLRGRVGRGDKPSTCLL
LYKGPLGEIAQARLKVMRETEDGFRIAEEDLKLRGEGELLGTRQSGTPGF
RLASIEAHGDLLEIARKDARYILASDPDLESERGQALRVLLYLFGRDEAI
RLLRAG
>BR1270 recJ, single-stranded-DNA-specific exonuclease RecJ
MTTERFFLGVKQSATGQKWVDRLGPREANTALAIAQHHGISDLVARVLAG
RGVSVEGAPEFVDPTLRNLMPDPATLNDMDNAAGRIADAIQRRETVAIFG
DYDVDGACSSALMARFLKHYGVQHSIYIPDRIFEGYGPNPDAMRELAAKG
ASLIVTVDCGTNSVPSITAAKQAGADVVVLDHHQVGGDLPEDAVAIVNPN
REDDISQQGHLCAAGVVFLALVQVAKILRARGKGPGPDLLSMLDLVALAT
VCDVVPLKGVNRAFVVKGLLVARGQSNVGLAALARVARIGEPLNAFHLGY
LIGPRINAGGRIGDAGLGARLLTLDDPAMADRIAMELDRLNQERQAMEAE
MLMEAEAEASLEISGGAGASVIVTASDRWHPGIVGLLASRLKEKARRPAF
AIAFNANGVGSGSGRSISGLDLGKLVRGAVEKGLLVKGGGHAMAAGITIE
RGNLGALRAYLEEEAADIVSRLRENQSLSIDGALAASGATVALYEALQKA
GPYGSAHPQPLLALPHHVLADVRGVGRDHVRVTLRGADGKRVNAIAFRAA
EGDLGRFLFNNIGCSVHVAGNLSLNHWNGSVSPQIQILDAALPV
>BR1421 recN, DNA repair protein RecN
MLSHLSIRDIVLIERLDIVFRSGLSVLTGETGAGKSILLDSLSLALGARG
DASLVRHGADQGQVTAVFDVPGNHPARLFLRENGFDDDGDIILRRLQMGD
GRTRVFINDQAASVALLRDLGKRLVEIHGQHDDRALIDTDLHRTLLDAFG
GLDAQAMLVRERHKAWRDAESALAKHRARVEQAEREGDYLRSSVEELTKL
DPQPGEEEELAERRATMMKSEKIAGDVNEAGELLSGQGSPVPSLASLVRR
LERKAIEAPHLLEPVCKAIDEALDSLARAQDGIDHAMREIDFDPRVLEQV
EERLFALRAAARKYSVSVEGLPALRDKMDADLADLDAGAEKLIQLEAHAG
EMRAAYDEAAAQLSAARKETAGHLKAAVMAELPALKLERAEFIVEMTTDP
QTRTAEGIDTVEYWVRTNPGTRAGPMMKVASGGELSRFLLALKVALADRG
SAPTLVFDEIDTGVGGAVADAIGQRLARLSGRVQVLSVTHAPQVAARAST
HFLIAKSATHEDRMATSIRVMATDERQEEIARMLAGASITDEARAAAERL
LAENGAPAS
>BR0032 recR, recombination protein RecR
MSKRIAGPEIERLIQLLARVPGLGPRSARRAALHLIKKKEALLVPLGGAM
QEAAEKVRICSCCGNVDTSDPCTICTDERRDPATLIVVEDVSDLWALERA
GTMNVRYHVLGGRLSPLDGIGPDDLNIKGLVERVASGAIKEVILAVNATV
EGQTTAHYITDQLSNFDVRVTRLAHGVPVGGELDYLDEGTLAAALRARTT
L
>BR0477 rnhA, ribonuclease H
MKRIEAYTDGACSGNPGPGGWGALLRWNGNEKELKGGEAETTNNRMELMA
AISALSALKEPCEVDLYTDSVYVRDGISGWIEGWKRNGWKTAAKKPVKNA
ELWQALDEARKAHKVTWHWIKGHAGHPENERADELARAGMEPFKYAGHRT
LKVK
>BR0386 rnhB, ribonuclease HII
MKRSASDSPLLFDLPLAPDFSQEQQLMKRGLKHIAGIDEAGRGPLAGPVV
AAAVVLDQNDLPEGLDDSKRLTAARREALYEIILTKAITVSVASLSARSI
DASDIRKAALEAMRRAVIGLTLKPCHALVDGRDVPPGLPCPGSALVKGDQ
RSVSIAAASIVAKVTRDRMMIRAGAAHPPYGLEIHAGYATQKHRAAIESE
GPVPGLHRYTFAPIKGRFDC
>BR1703 ruvA, Holliday junction DNA helicase RuvA
MIGKLKGVIDEIAEDHAVIDVHGVGYVAFCSARTLGNLGGAGEAAILFIE
TYVREDMIRLYGFATQLEREWFRLLQNVQGVGAKVALAVLGTLSPSELAN
AIALRDIAMVSRAPGVGKKVAERIVTELKNKAPAFAGEASGTIGLKQELG
AGAAPAPVADAVSALSNLGYSRDQAANAVAAALKETGEGADSAKLIRLGL
KELSQ
>BR1702 ruvB, Holliday junction DNA helicase RuvB
MSDRNPLIDADRRADEDNTLRPQTLDDFVGQAAARANLKVFIEAAKVRGE
ALDHVLFVGPPGLGKTTLAQIMAKELGVNFRSTSGPVIAKAGDLAALLTN
LEERDVLFIDEIHRLSPAVEEILYPAMEDFQLDLIIGEGPAARSVKIDLA
KFTLVAATTRLGLLTTPLRDRFGIPVRLNFYTVEELEYIVRRGARIMQMG
ISSDGAREVARRSRGTPRIAGRLLRRVRDFALVAGADIIDRRIADEALSR
LEVDNRGLDQLDRRYLNIIARNFGGGPVGIETIAAGLSEPRDAIEDIIEP
YLIQQGFLQRTPRGRVLTAVAWQHLGLPAPAEIIQQSQYGLFMEDE
>BR1704 ruvC, crossover junction endodeoxyribonuclease RuvC
MKETIRIIGIDPGLLRTGWGIVESLGNSLHFIGSGTVTSNAEMDLASRLC
QLHEGLSKVLHEFMPHEAAVEHTFVNKDATATLKLGQARGIALLAPAQAG
LPVAEYAPNAVKKAVIGVGHGEKQQIHMMVKVLMPRASFDTSDAADALAI
AICHAHHRQSIVSARRMQALLAG
>BRA0185 tag, DNA-3-methyladenine glycosidase I
MSDMAEARAGLVVGADGRTRCFWPGELPDYLAYHDNEWGVPVADDFRLFE
KICLEGFQSGLSWLTILRKRENFRAAFDGFNFHRIATYDESDVERLLADK
GIVRHRGKIVSVINNAGRAIELIEEKGSLAAYFWSFEPGAENRPAVVDYP
TLVANPITATSTRISKDLKKRGWSFVGPTTVYAFMQAMGLVNDHIEGCHC
RATIEKLRQNFKRPGKKL
>BRA0604 topA, DNA topoisomerase I
MNVVVVESPAKAKTINKYLGSDYKVLASFGHVRDLPAKDGSVRPDEDFAM
SWEVDSNSAKRLADIVKALKDSDGLILATDPDREGEAISWHVLEVLRQKK
ALNGKTVKRVAFNAITKKAVLDAIAHPRDIDEPLVDAYLARRALDYLVGF
TLSPVLWRKLPGARSAGRVQSVALRLVCDREAEIERFVREEYWNIAALLK
TPRNDSFTARLTALDGKKLGKLDIKNGEQAGAIRTMLESANFKAVSVEAK
PTKRNPGPPFTTSTLQQAASGQLGFSASRTMQVAQRLYEGVDIGGETAGL
ITYMRTDGVQIAPEAINAARDAIAKSFGAKYVPEKPRYYSSKAKNAQEAH
EAIRPTDFSRHPKDVRRFLDEDQARLYELIWKRAIASQMQAADIERTTVD
IEATNGSRAAMLRANGSVTKFDGFLAAYMDHREEEDDDEESAKLPEIRSG
EALAREKIDATQHSTEPPPRYSEATLIKKMEELGIGRPSTYAATLATLRD
REYIIIDKRKLIPEAKGRLVTAFLESFFERYVEYDFTADLEEKLDLISDG
KLSWKEVLRDFWRAFSGSVEDIKELRITNVLDALNEELAPLVFPAREDGS
DPRSCPTCGTGTLSLKLGRYGAFVGCSNYPECKYTRQLGGEANGETAASD
EPKPLGKDPFTGEEITARTGRFGPYIQRGEGKEAKRASLPKGWTLDTVDH
EKAIALLSLPRNIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVF
SVGLNRAVSVLADKQSKGGGRGRSTPAALATLGDHPDGGAITVRDGRYGP
YVNWGKVNATLPKGKDPASVTLEEALALITEKAGSSKGRKAPARKSAASS
EKKTTAKKTATKKAPAKAKSKAKAAEE
>BR1104 uvrA, excinuclease ABC, A subunit
MSDQKFISIRGAREHNLKNVDLDLPRDKLIVMTGLSGSGKSSLAFDTIYA
EGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRST
VGTVTEIYDYMRLLFARVGIPYSPATGLPIESQTVSQMVDRVIALEEGTR
LYILAPIVRGRKGEYRKELAELQKKGFQRVKVDGTFYEIADVPPLDKKYK
HDIDVVVDRVVVRPDLSTRLADSLETCLKLADGLAIAEFADKPLPVGETA
EGGSANKSANETHERILFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPT
CDGLGTQQAIDPNLIIPDESAALKDGAVAPWARSSSPYYNQTLEALGKAY
GFKVSARWSELSEEARQAILYGTKGREITFHYDDGLRSYQTTKPFEGVIP
NLERRWKETDSAWSREEIERFMASTPCPACNGYRLKPEALSVKIGKKHIG
EITEMSIRKADAWFRDIDGSFNEKQREIAARILKEIRERLQFLNDVGLDY
LTLARNSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNARL
LDTLRHLRDLGNTVIVVEHDEDAILTADYVVDIGPAAGVHGGKVIAQGSP
QDIMANTNSLTGKYLSGAMEVAVPAERRKISKTKRLRVVGARGNNLKNVS
ADIPLGTFTAVTGVSGGGKSTFLIETLFKAASRRIMGSREHPAEYDRIEG
LEFLDKVIDIDQSPIGRTPRSNPATYTGAFTPIRDWFAGLPEAKARGYQP
GRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCDVCHGKRYNRETLDV
LFKGKSIADVLDMTVEEGAEFFSAVPAVRDKLETLVKVGLGYIKVGQQAT
TLSGGEAQRVKLAKELSRRATGRTLYILDEPTTGLHFHDVAKLLEVLHEL
VEQGNTVVVIEHNLEVIKTADWVIDLGPEGGDGGGEIVAVGRPEDIVQEK
RSYTGQFLKELLERRPKRSSQAAE
>BR1512 uvrB, excinuclease ABC, B subunit
MASSKDKHIRDSRNKADGFGEAPQAGFSGAPLSGTIADWAKEIGDEAAKP
RAKNPKQPKKIPERSKEASRTGRGTSMGGAASVKERTAAGLNPVAGLDIS
LEEAAGLSPSGATATVQALANLIQSGNPLFKHGELWTPHRPVRPEKSEGG
IPIRMETSFEPSGDQPTAIRDLVEGLENQDRTQVLLGVTGSGKTFTMAQV
IEKTQRPALILAPNKTLAAQLYGEFKSFFPNNAVEYFVSYYDYYQPEAYV
PRSDTYIEKESSINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVE
TYTAMTFEMKIGDRLDQRQLLADLVAQQYKRQDINFVRGSFRVRGDTIEI
FPAHLEDRAWRISLFGDEIETITEFDPLTGQKTGDLKSVKIYANSHYVTP
RPTLNQAIKSIKEELKHRLDELTRAGRLLEAQRLDQRTTFDLEMLEATGS
CAGIENYSRYLTGRKPGEPPPTLFEYIPDNALVFIDESHVTVPQIGGMYR
GDFRRKATLAEYGFRLPSCMDNRPLRFEEWDAMRPQTIAVSATPGNWEME
EAGGVFAEQVIRPTGLIDPPVEIRPAKTQVDDVLGEIRDTAKKGYRTLVT
VLTKRMAEDLTEYLHEQGVRVRYMHSDIDTLERIEIIRDLRLGAFDVLVG
INLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVDGKVIL
YADNMTGSMQRAIDETNRRREKQQAYNEAHGITPASVKKNISDILDSVYE
RDHVRADISGFAEEGAMMGNNLASHVEYLEKQMRDAAADLDFEKAARLRD
EIKRLRETELAIADDPMAREVELESPVTGRTKGRHNAGRKMHRVVTDDEG
GKSLFQKPSLDNMGPGTDMAKPRHDGPLPTAAESRFRKNTLDEMTVKRTE
IPAGGEAPIRRERAGIGSYEDPAEVSRKKRRPGKTGRPGR
>BR0699 uvrC, excinuclease ABC, C subunit
MKRLPNNPGVYRMFNSDGDVLYVGKARNLKKRVSNYARGIGHSNRITRMI
RETVTMEFVVTRTETEALLLEANLIKRSRPRFNVLMRDDKSFPYILLTGG
HRAPGIFKHRGARSRKGDYFGPFASAGAVGRTINALQRAFLLRTCTDSVF
ETRTRPCLLYQIKRCSAPCTYEISDEDYAGLVAEAKAFLSGKSQSVKDHL
AAAMQAASADLDFEHAAVYRDRLAALSHVQSHQGINPQTVEEADVFAIHQ
EGGMTCIQVFFFRTGQNWGNRAYFPKADSSLGPAEVLGAFLSQFYDDKPC
PKLVLLSETVEEQSLITEALSTRAGHKVQVSVPQRGEKKELVQHALTNAR
EALGRRLAETSSQARLLQGLAETFGLPRAPRRIEVYDNSHIMGTNAVGGM
IVAGPEGFVKNQYRKFNIRSTDITPGDDFGMMREVIERRFSRLVKEHGTP
AGEVENPDAFPAWPDVILIDGGQGQVGAVRQILGEMGISDLVTAIGIAKG
VDREAGRERFFMEGKQPFTLPPRDPVLYFIQRLRDEAHRFAIGTHRARRK
KEMVRNPLDEIAGIGPTRKRALLHHFGTAKAVSRAAVEDLMQIDGISEAM
ARAIHDHFRDK
>BR1916 xerC, integrase/recombinase XerC
MATNSEFLIPARADLAAAREEWLKSLKTMRRLSDNTLIAYERDTRQFLQF
LTGHLGEPPSLKEIGNLRIADLRSFLANRRNDGAGARTLGRGLAGVRSLL
RHLEKRGLVNAAGASAMRAPRQPKSLPKPLTADDARRVVSADGQMAEEPW
IAARNAAVLTLLYGCGLRISEALGLSGDALSDPSARSMTITGKGSKTRLV
PLLPAVHKAVAQYRALCPFDLSAGQPLFRGAKGGPLHAAIIQREMQKLRA
GLGLPDSATPHALRHSFATHLLGRGGDLRTIQELLGHASLSTTQVYTGVD
TQRLLEVYDKTHPRA
>BR2031 xerD, integrase/recombinase XerD
MRASLAIENFLEMMSAERGAAQNTLESYRRDLEAAAEELAAKGVNLAEAE
TGHIRMTLDTMAAQGFAPTSQARRLSALRQFFRFLYSEGFRQDDPTGILD
APKKQKPLPKIMSVENVGRLLDRAALEANEAAEPGERIKALRLHALLETL
YATGLRVSELVGLPVTVARTDHRFLLVRGKGSKDRMVPLSRKARDALQKF
LTLRDSLPGSDDNPWLFPAFSESGHLARQVFARELKGLAARAGLAASSVS
PHVLRHAFASHLLQNGADLRTVQQLLGHADISTTQIYTHVLEERLHKLVS
EHHPLAD
>BRA0764 xseA, exodeoxyribonuclease VII, large subunit
MASDSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPH
SSGHAYFALKDDRARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGS
SKYQIVIEQMEPAGAGALMALLEERKQRLAAEGLFDPALKQLLPFMPRVI
GVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRVQGDTCGPEVATAVNGFN
TLPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHIPVISAVG
HETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSR
FFDQKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRV
HFDGHARQLSPRLLQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHR
ANRLSPEPILRRTRLTGSTLEQLDRRRDQAVRLLIERVKRRSQELDRLMR
TLSYESVLERGFAVVFDAQGKPVKQAAAVLPGDALSVRFRDGDVGVVARA
GLTIPDPTKGQ
>BR0431 xseB, exodeoxyribonuclease VII, small subunit
MVTEPSNADIAVMSFEDALKQLEKIVDDLERGDVPLEESIRIYERGEALK
KHCDTLLKSAEDKVEKIRIGRDGQPVGTEPLDPE
>BR0873 xth-1, exodeoxyribonuclease III
MKIATWNINGVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEAL
GYHVETHGQKGFNGVALLSKKSPDEINKGLPGDDSDEQARFIEGIYSTDT
GVVRVVSLYLPNGNPIDTEKFPYKLSWMQRLENWAKKRLTLEEPLVLAGD
YNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTDAIRASTDESG
VYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEKHVRAWEKPSD
HVPVTVTLAV
>BR2004 xth-2, exodeoxyribonuclease III
MAFSIATWNINSVRLRMPLVEQFLRDYQPDVLCLQETKCPDDLFPAKGFR
ALGYEHIAISGQKGYHGVATVSRRPLDGVEKVDFCNMGDCRHLSAVVEAG
DRKLRIHNFYVPAGGDEPDPEINPKFAHKLAFLEEMRAIIADRKDGCSSL
LVGDLNIAPLENDVWSHKQLLKIVSHTPIETETLEDLRIKGGWSDLMRHL
IAADQKIYTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKGLQVLRDAR
GWDRPSDHVPVIATFDLD