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2024-05-19 16:16:16

Gene list

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COG category: Replication, recombination and repair
Organism: Brucella suis 1330, 1330

Number of genes found: 131

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Brucella suis 1330, 1330
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA BR0636 site-specific recombinase, phage integrase familySubName: Full=Phage integrase family site specific recombinase; SubName: Full=Site-specific recombinase, phage integrase family; chromosome I CDS629481 927 - 0.522114
NA BR0514 transposase, interruption-CSubName: Full=Transposase, interruption-C; chromosome I CDS514927 231 + 0.541126
NA BRA1112 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS1100515 513 + 0.530214
NA BRA0558 IS66 family element, orf1, transposase, putativeSubName: Full=IS66 family Orf1; SubName: Full=IS66 family element, orf1, transposase, putative; chromosome II CDS537743 468 - 0.611111
NA BR0723 exonuclease, putativeSubName: Full=Exonuclease, putative; chromosome I CDS707049 612 - 0.527778
NA BR2102 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS2024183 3159 + 0.629946
NA BR0996 hydrolase, TatD familySubName: Full=Hydrolase, TatD family; SubName: Full=TatD family hydrolase; chromosome I CDS959828 792 + 0.558081
NA BR1474 site-specific recombinase, phage integrase familySubName: Full=Phage integrase family site specific recombinase; SubName: Full=Site-specific recombinase, phage integrase family; chromosome I CDS1428743 495 + 0.551515
NA BRA1130 conserved domain proteinSubName: Full=Conserved domain protein; SubName: Full=Uncharacterized protein; chromosome II CDS1118970 408 - 0.578431
NA BRA0556 IS66 family element, orf3, putativeSubName: Full=IS66 family element, orf3, putative; SubName: Full=IS66 family orf3; chromosome II CDS535772 1572 - 0.574427
NA BR1413 DNA helicase IISubName: Full=DNA helicase II; chromosome I CDS1365640 2577 + 0.594102
NA BRA0557 IS66 family element, orf2, putativeSubName: Full=IS66 family element, orf2, putative; SubName: Full=IS66 family orf2; chromosome II CDS537393 387 - 0.563307
NA BR2103 helicase, UvrD/Rep familySubName: Full=Helicase, UvrD/Rep family; SubName: Full=UvrD/Rep family helicase; chromosome I CDS2027338 3543 + 0.614451
NA BRA0362 site-specific recombinase, phage integrase familySubName: Full=Phage integrase family site specific recombinase; SubName: Full=Site-specific recombinase, phage integrase family; chromosome II CDS343695 1209 + 0.573201
NA BR0869 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS841516 642 - 0.599688
NA BR0938 ATP-dependent RNA helicase, DEAD/DEAH box familySubName: Full=ATP-dependent RNA helicase, DEAD/DEAH box family; SubName: Full=DEAD-box ATP dependent DNA helicase; chromosome I CDS911871 1449 + 0.57971
NA BR0070 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS76108 1452 - 0.648072
NA BRA1006 exonuclease, putativeSubName: Full=DNA polymerase III subunit epsilon; SubName: Full=Exonuclease, putative; chromosome II CDS994954 999 + 0.584585
NA BR0966 site-specific recombinase, phage integrase familySubName: Full=Phage integrase family site specific recombinase; SubName: Full=Site-specific recombinase, phage integrase family; chromosome I CDS937800 1026 - 0.508772
NA BR0571 DnaA domain proteinSubName: Full=DnaA domain protein; SubName: Full=Uncharacterized protein; chromosome I CDS566070 456 + 0.567982
NA BRA0889 ada regulatory protein, putativeSubName: Full=Ada regulatory protein, putative; chromosome II CDS872690 1053 - 0.584046
NA BR1052 ATP-dependent RNA helicase, DEAD/DEAH box familySubName: Full=ATP-dependent RNA helicase, DEAD/DEAH box family; SubName: Full=DEAD-box ATP dependent DNA helicase; chromosome I CDS1020914 1608 + 0.621269
NA BR0664 DNA repair protein RecO, putativeRecName: Full=DNA repair protein RecO; AltName: Full=Recombination protein O; chromosome I CDS653696 744 + 0.590054
NA BR1673 IS711, transposase orfBSubName: Full=IS711, transposase orfB; chromosome I CDS1618519 393 + 0.503817
NA BR1939 mutator mutT protein, putativeSubName: Full=Mutator mutT protein, putative; chromosome I CDS1870168 417 - 0.597122
NA BR0513 ISBm3, transposase, programmed frameshiftSubName: Full=ISBm3, transposase, programmed frameshift; chromosome I CDS513927 944 + 0.576271
NA BR1646 base-excision DNA repair proteinSubName: Full=Base-excision DNA repair protein; chromosome I CDS1595416 699 - 0.636624
NA BR0523 ISBm1, transposase orfASubName: Full=ISBm1, transposase orfA; chromosome I CDS522514 429 + 0.601399
NA BR1836 (di)nucleoside polyphosphate hydrolaseRecName: Full=RNA pyrophosphohydrolase; EC=3.6.1.-; AltName: Full=(Di)nucleoside polyphosphate hydrolase; chromosome I CDS1767681 549 - 0.601093
NA BR0260 site-specific recombinase, resolvase familySubName: Full=Resolvase family site-specific recombinase; SubName: Full=Site-specific recombinase, resolvase family; chromosome I CDS268512 618 + 0.580906
NA BR0256 site-specific recombinase, phage integrase familySubName: Full=Phage integrase family site specific recombinase; SubName: Full=Site-specific recombinase, phage integrase family; chromosome I CDS265442 1755 + 0.556695
NA BRA1072 IS3 family element, transposase orfBSubName: Full=IS3 family element, transposase orfB; SubName: Full=IS3 family transposase orfB; chromosome II CDS1055309 909 - 0.492849
NA BRA0207 conserved hypothetical protein TIGR00095SubName: Full=Uncharacterized protein; chromosome II CDS191273 564 + 0.595745
NA BRA0615 ImpB/MucB/SamB family proteinRecName: Full=DNA polymerase IV; Short=Pol IV; EC=2.7.7.7; chromosome II CDS600497 1338 + 0.590433
NA BRA1038 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS1023847 282 + 0.496454
NA BR1855 transposase, putativeSubName: Full=Transposase, putative; chromosome I CDS1785878 687 - 0.480349
NA BRA0141 SyrB family protein, putativeSubName: Full=SyrB family protein, putative; chromosome II CDS134697 438 + 0.465753
NA BR0620 phage SPO1 DNA polymerase-related proteinSubName: Full=Phage SPO1 DNA polymerase-related protein; chromosome I CDS617267 873 - 0.61512
NA BR2057 conserved hypothetical proteinSubName: Full=DNA polymerase III subunit delta; SubName: Full=Uncharacterized protein; chromosome I CDS1981436 1044 + 0.598659
NA BR1554 MutT/nudix family proteinSubName: Full=MutT/nudix family protein; chromosome I CDS1503183 507 - 0.609467
NA BR1102 single-stranded DNA-binding protein familyRecName: Full=Single-stranded DNA-binding protein; Short=SSB; chromosome I CDS1076137 507 - 0.566075
NA BRA0559 ISBm1, transposase orfA, interruption-NSubName: Full=ISBm1, transposase orfA, interruption-N; chromosome II CDS538291 396 - 0.580808
NA BRA0597 conserved hypothetical protein TIGR00250RecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; chromosome II CDS582470 489 + 0.613497
NA BR1105 DNA-binding protein HUSubName: Full=DNA-binding protein HU; chromosome I CDS1080652 276 - 0.597826
NA BR0387 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS395767 1173 - 0.610401
NA BR0528 ISBm1, transposase orfB, interruption-CSubName: Full=ISBm1, transposase orfB, interruption-C; chromosome I CDS524887 240 + 0.541667
NA BR1387 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS1341126 1122 - 0.585562
NA BRA0626 exonuclease, putativeSubName: Full=Exonuclease, putative; chromosome II CDS607942 675 + 0.539259
NA BRA0364 repA-related proteinSubName: Full=RepA-related protein; chromosome II CDS345499 1059 + 0.564684
NA BR1206 ATPase, AAA familySubName: Full=ATPase, AAA family; SubName: Full=Recombination factor protein RarA; chromosome I CDS1183037 1314 - 0.600457
NA BR1045 MutT/nudix family proteinSubName: Full=MutT/nudix family protein; chromosome I CDS1015171 489 - 0.595092
NA BR0533 ISBm1, transposase orfASubName: Full=ISBm1, transposase orfA; chromosome I CDS528047 429 + 0.599068
NA BR0135 IS711, transposase orfBSubName: Full=IS711, transposase orfB; chromosome I CDS150577 393 + 0.503817
NA BRA1116 IS3 family element, transposase orfBSubName: Full=IS3 family element, transposase orfB; SubName: Full=IS3 family transposase orfB; chromosome II CDS1102965 882 + 0.494331
NA BR0534 ISBm1, transposase orfBSubName: Full=ISBm1, transposase orfB; chromosome I CDS528394 417 + 0.57554
NA BRA0607 MutT/nudix family proteinSubName: Full=MutT/nudix family protein; chromosome II CDS594755 732 + 0.587432
NA BR1078 site-specific recombinase, phage integrase familySubName: Full=Phage integrase family site specific recombinase; SubName: Full=Site-specific recombinase, phage integrase family; chromosome I CDS1048355 1245 + 0.539759
NA BR0527 IS711, transposase orfBSubName: Full=IS711, transposase orfB; chromosome I CDS524494 393 + 0.503817
NA BRA1073 IS3 family element, transposase orfASubName: Full=IS3 family element, transposase orfA; SubName: Full=IS3 family transposase orfA; chromosome II CDS1056214 282 - 0.482269
NA BR0729 transposase, putativeSubName: Full=Transposase, putative; chromosome I CDS712551 2115 + 0.523404
NA BRA1115 IS3 family element, transposase orfASubName: Full=IS3 family element, transposase orfA; SubName: Full=IS3 family transposase orfA; chromosome II CDS1102687 282 + 0.482269
NA BR0124 ATP-dependent RNA helicase, DEAD/DEAH box familySubName: Full=ATP-dependent RNA helicase, DEAD/DEAH box family; SubName: Full=DEAD-box ATP dependent DNA helicase; chromosome I CDS138038 1881 + 0.602339
NA BR0648 phage SPO1 DNA polymerase-related proteinSubName: Full=Phage SPO1 DNA polymerase-related protein; chromosome I CDS639751 672 - 0.581845
NA BR1491 MutT/nudix family proteinSubName: Full=MutT/nudix family protein; chromosome I CDS1449869 462 + 0.551948
NA BR0281 MutT/nudix family proteinSubName: Full=MutT/nudix family protein; chromosome I CDS289654 390 + 0.612821
NA BR0178 conserved hypothetical protein TIGR00252RecName: Full=UPF0102 protein BR0178/BS1330_I0178; chromosome I CDS189608 381 + 0.616798
NA BR0530 IS5 family element, transposase orfASubName: Full=IS5 family element, transposase orfA; SubName: Full=IS5 family transposase orfA; chromosome I CDS526433 369 + 0.571816
NA BR1082 site-specific recombinase, resolvase familySubName: Full=Resolvase family site-specific recombinase; SubName: Full=Site-specific recombinase, resolvase family; chromosome I CDS1053748 618 - 0.580906
NA BRA0602 DNA processing protein DprA, putativeSubName: Full=DNA processing protein DprA, putative; chromosome II CDS587683 1182 + 0.617597
NA BRA0379 DNA-damage-inducible protein J, putativeSubName: Full=DNA-damage-inducible protein J, putative; chromosome II CDS361149 195 - 0.512821
NA BR0524 ISBm1, transposase orfB, interruption-NSubName: Full=ISBm1, transposase orfB, interruption-N; chromosome I CDS522861 375 + 0.589333
NA BR0036 MutT/nudix family proteinSubName: Full=MutT/nudix family protein; chromosome I CDS41262 948 + 0.600211
NA BRA0844 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS829251 930 + 0.575269
NA BR0531 IS5 family element, transposase orfBSubName: Full=IS5 family element, transposase orfB; SubName: Full=IS5 family transposase orfB; chromosome I CDS526897 342 + 0.476608
NA BR0993 DNA polymerase III, delta prime subunit domain proteinSubName: Full=DNA polymerase III subunit delta; EC=2.7.7.7; SubName: Full=DNA polymerase III, delta prime subunit domain protein; chromosome I CDS957021 1083 + 0.599261
NA BR1563 MutT/nudix family proteinSubName: Full=MutT/nudix family protein; chromosome I CDS1514238 456 - 0.535088
NA BR0690 conserved hypothetical proteinSubName: Full=DNA polymerase III subunit chi; SubName: Full=Uncharacterized protein; chromosome I CDS678306 450 + 0.562222
NA BR1851 transposase, putativeSubName: Full=Transposase, putative; chromosome I CDS1781793 687 + 0.480349
NA BR0714 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS699341 696 + 0.602012
NA BRA0847 IS711, transposase orfBSubName: Full=IS711, transposase orfB; chromosome II CDS832941 393 + 0.503817
NA BR0870 nuclease domain proteinSubName: Full=Nuclease domain protein; SubName: Full=Nuclease domain-containing protein; chromosome I CDS842254 570 - 0.577193
ada BR0368 ada regulatory proteinSubName: Full=Ada regulatory protein; EC=2.1.1.63; chromosome I CDS379373 1086 + 0.594843
alkB BRA0533 alkylated DNA repair protein AlkBSubName: Full=Alkylated DNA repair protein AlkB; chromosome II CDS512953 639 - 0.5759
babI BR0491 modification methylase BabIRecName: Full=Modification methylase BabI; Short=M.BabI; EC=2.1.1.72; AltName: Full=Adenine-specific methyltransferase BabI; AltName: Full=DNA methyltransferase CcrM; AltName: Full=M.CcrMI ortholog; chromosome I CDS490426 1134 + 0.600529
dnaA BR0001 chromosomal replication initiator protein DnaARecName: Full=Chromosomal replication initiator protein DnaA; chromosome I CDS784 1491 + 0.60228
dnaB BR0450 replicative DNA helicaseSubName: Full=Replicative DNA helicase; EC=3.6.1.-; chromosome I CDS449962 1506 - 0.586321
dnaE-1 BR0069 DNA polymerase III, alpha subunitRecName: Full=Error-prone DNA polymerase; EC=2.7.7.7; chromosome I CDS72875 3234 - 0.604205
dnaE-2 BR0825 DNA polymerase III, alpha subunitSubName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7; SubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7; chromosome I CDS802362 3492 + 0.579324
dnaG BR1480 DNA primaseRecName: Full=DNA primase; EC=2.7.7.-; chromosome I CDS1434620 1968 - 0.615854
dnaN BR0002 DNA polymerase III, beta subunitRecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; chromosome I CDS2503 1194 + 0.58794
dnaQ BR2071 DNA polymerase III, epsilon subunitSubName: Full=DNA polymerase III subunit epsilon; EC=2.7.7.7; SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7; chromosome I CDS1997247 705 + 0.582979
dnaX BR0034 DNA polymerase III, gamma and tau subunitsSubName: Full=DNA polymerase III subunits gamma and tau; EC=2.7.7.7; SubName: Full=DNA polymerase III, gamma and tau subunits; EC=2.7.7.7; chromosome I CDS38740 1809 - 0.618021
gyrA BR1097 DNA gyrase, A subunitRecName: Full=DNA gyrase subunit A; EC=5.99.1.3; chromosome I CDS1070150 2769 - 0.589021
gyrB BR0125 DNA gyrase, B subunitRecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome I CDS140014 2433 - 0.597616
himA BR0778 integration host factor, alpha subunitRecName: Full=Integration host factor subunit alpha; Short=IHF-alpha; chromosome I CDS762522 324 + 0.527778
ihfB BR0153 integration host factor, beta subunitRecName: Full=Integration host factor subunit beta; Short=IHF-beta; chromosome I CDS170152 285 - 0.57193
ligA BR1420 DNA ligase, NAD-dependentRecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; chromosome I CDS1373732 2160 - 0.599537
mfd BRA0579 transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome II CDS557774 3369 - 0.607005
mutL BRA0218 DNA mismatch repair protein MutLRecName: Full=DNA mismatch repair protein MutL; chromosome II CDS203699 1872 - 0.624466
mutM BR2183 formamidopyrimidine-DNA glycosylaseRecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase MutM; Short=AP lyase MutM; EC=4.2.99.18; chromosome I CDS2105205 882 + 0.60771
mutS BR0147 DNA mismatch repair protein MutSRecName: Full=DNA mismatch repair protein MutS; chromosome I CDS162981 2733 + 0.605562
mutY BR0493 A/G-specific adenine glycosylaseSubName: Full=A/G-specific adenine glycosylase; EC=3.2.2.-; chromosome I CDS492256 1077 - 0.611885
nth BR0166 endonuclease IIIRecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; chromosome I CDS179868 747 + 0.603748
ogt BR0185 methylated-DNA--protein-cysteinemethyltransferaseSubName: Full=Methylated-DNA--protein-cysteine methyltransferase; EC=2.1.1.63; chromosome I CDS195339 579 - 0.594128
parC BR0754 DNA topoisomerase IV, A subunitRecName: Full=DNA topoisomerase 4 subunit A; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit A; chromosome I CDS741262 2313 + 0.581064
parE BRA0591 DNA topoisomerase IV, B subunitRecName: Full=DNA topoisomerase 4 subunit B; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit B; chromosome II CDS577214 2100 + 0.600476
polA BR0123 DNA polymerase ISubName: Full=DNA polymerase I; EC=2.7.7.7; chromosome I CDS134957 2940 + 0.594898
priA BR1804 primosomal protein NSubName: Full=Primosomal protein N; SubName: Full=Primosome assembly protein PriA; chromosome I CDS1731839 2235 - 0.624609
radC BR1283 DNA repair protein RadCRecName: Full=UPF0758 protein BR1283/BS1330_I1279; chromosome I CDS1243719 750 + 0.604
recA BR1202 recA proteinRecName: Full=Protein RecA; AltName: Full=Recombinase A; chromosome I CDS1180164 1086 - 0.569982
recF BR0003 recF proteinRecName: Full=DNA replication and repair protein RecF; chromosome I CDS3878 1155 + 0.612987
recG BRA0581 ATP-dependent DNA helicase RecGSubName: Full=ATP-dependent DNA helicase RecG; EC=3.6.1.-; chromosome II CDS561723 2121 + 0.601603
recJ BR1270 single-stranded-DNA-specific exonuclease RecJSubName: Full=Single-stranded-DNA-specific exonuclease RecJ; EC=3.1.-.-; chromosome I CDS1231357 1785 - 0.616247
recN BR1421 DNA repair protein RecNRecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; chromosome I CDS1376077 1680 - 0.622619
recR BR0032 recombination protein RecRRecName: Full=Recombination protein RecR; chromosome I CDS37656 606 - 0.607261
rnhA BR0477 ribonuclease HRecName: Full=Ribonuclease HI; Short=RNase HI; EC=3.1.26.4; chromosome I CDS474948 465 + 0.597849
rnhB BR0386 ribonuclease HIIRecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; chromosome I CDS394928 663 - 0.624434
ruvA BR1703 Holliday junction DNA helicase RuvARecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; chromosome I CDS1646722 618 - 0.613269
ruvB BR1702 Holliday junction DNA helicase RuvBRecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; chromosome I CDS1645641 1041 - 0.616715
ruvC BR1704 crossover junction endodeoxyribonuclease RuvCRecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; chromosome I CDS1647344 522 - 0.595785
tag BRA0185 DNA-3-methyladenine glycosidase ISubName: Full=DNA-3-methyladenine glycosidase I; EC=3.2.2.20; chromosome II CDS169925 657 + 0.550989
topA BRA0604 DNA topoisomerase IRecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; chromosome II CDS589297 2634 + 0.596811
uvrA BR1104 excinuclease ABC, A subunitRecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; chromosome I CDS1077542 2925 + 0.583932
uvrB BR1512 excinuclease ABC, B subunitRecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; chromosome I CDS1464732 2823 + 0.601842
uvrC BR0699 excinuclease ABC, C subunitRecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; chromosome I CDS685090 1836 - 0.592593
xerC BR1916 integrase/recombinase XerCRecName: Full=Tyrosine recombinase XerC; chromosome I CDS1848205 948 + 0.626582
xerD BR2031 integrase/recombinase XerDRecName: Full=Tyrosine recombinase XerD; chromosome I CDS1955887 924 + 0.597403
xseA BRA0764 exodeoxyribonuclease VII, large subunitRecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit; chromosome II CDS744986 1536 - 0.642578
xseB BR0431 exodeoxyribonuclease VII, small subunitRecName: Full=Exodeoxyribonuclease 7 small subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit; chromosome I CDS431638 255 + 0.568627
xth-1 BR0873 exodeoxyribonuclease IIISubName: Full=Exodeoxyribonuclease III; EC=3.1.11.2; chromosome I CDS844306 783 - 0.54917
xth-2 BR2004 exodeoxyribonuclease IIISubName: Full=Exodeoxyribonuclease III; EC=3.1.11.2; chromosome I CDS1926987 807 + 0.583643