TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-02 00:17:21

Gene list

Applied filters:

COG category: Replication, recombination and repair
Organism: Treponema pallidum subsp. pallidum str. Nichols, Nichols

Number of genes found: 62

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Treponema pallidum subsp. pallidum str. Nichols, Nichols
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
TP0001 chromosomal replication initiator protein (dnaA)chromosome CDS4 1395 + 0.407168
TP0002 DNA polymerase III, subunit beta (dnaN)chromosome CDS1641 1116 + 0.413082
TP0003 recF protein (recF)chromosome CDS2623 1212 + 0.435644
TP0005 DNA gyrase, subunit A (gyrA)chromosome CDS4391 2442 + 0.47543
TP0014 T. pallidum predicted coding region TP0014chromosome CDS13167 609 + 0.489327
TP0058 replicative DNA helicase (dnaB)chromosome CDS67640 1317 - 0.529992
TP0062 single-strand DNA binding protein (ssb)chromosome CDS70165 531 - 0.538606
TP0065 conserved hypothetical proteinchromosome CDS71776 588 + 0.498299
TP0102 rep helicase, single-stranded DNA-dependent ATPase (rep)chromosome CDS109750 1974 - 0.450861
TP0103 ATP-dependent DNA helicase, putativechromosome CDS111788 1824 + 0.527412
TP0105 DNA polymerase I (polA)chromosome CDS115806 2994 + 0.447562
TP0116 excinuclease ABC, subunit B (uvrB)chromosome CDS132863 2007 + 0.453413
TP0125 exodeoxyribonuclease (exoA)chromosome CDS146754 795 + 0.566038
TP0141 methylated-DNA-protein-cysteine S-methyltransferase (dat)chromosome CDS161909 534 + 0.559925
TP0162 Holliday junction DNA helicase (ruvB)chromosome CDS183384 1053 - 0.585945
TP0229 DNA polymerase, bacteriophage-typechromosome CDS237401 834 + 0.555156
TP0230 primosomal protein N (priA)chromosome CDS238239 1974 + 0.562817
TP0251 DNA-binding protein IIchromosome CDS262929 318 + 0.54717
TP0303 DNA mismatch repair protein (mutL)chromosome CDS315967 1947 - 0.575244
TP0310 T. pallidum predicted coding region TP0310chromosome CDS326392 384 + 0.585938
TP0328 DNA mismatch repair protein (mutS)chromosome CDS347468 2703 + 0.540881
TP0343 A/G-specific adenine glycosylase, putativechromosome CDS365621 834 + 0.495204
TP0344 transcription-repair coupling factor (trcF)chromosome CDS366459 3423 - 0.496348
TP0353 ribonuclease H (rnhA)chromosome CDS377198 510 - 0.6
TP0380 DNA repair helicase, putativechromosome CDS405261 1821 - 0.548051
TP0391 integrase/recombinase (codV)chromosome CDS416004 921 + 0.5038
TP0393 smf protein (smf)chromosome CDS417663 909 + 0.49725
TP0394 DNA topoisomerase I (topA)chromosome CDS418604 2196 + 0.478142
TP0395 integrase/recombinase (xprB)chromosome CDS420792 894 + 0.517897
TP0442 DNA repair protein (recN)chromosome CDS467790 1722 + 0.551103
TP0472 excinuclease ABC, subunit C (uvrC)chromosome CDS499677 2076 - 0.507225
TP0492 DNA primase (dnaG)chromosome CDS526077 1818 + 0.510451
TP0514 excinuclease ABC, subunit A (uvrA)chromosome CDS550459 2883 + 0.473118
TP0517 Holliday junction nuclease (ruvC)chromosome CDS557904 591 - 0.468697
TP0521 DNA polymerase III, gamma and tau subunits, putativechromosome CDS561736 1272 - 0.495283
TP0526 ATP-dependent helicase (hrpA)chromosome CDS568144 2007 + 0.494768
TP0543 Holliday junction DNA helicase (ruvA)chromosome CDS584926 684 - 0.520468
TP0588 conserved hypothetical proteinchromosome CDS639853 765 - 0.482353
TP0626 exonuclease, putativechromosome CDS681001 1176 + 0.491497
TP0627 exonuclease (sbcC)chromosome CDS682173 3144 + 0.465649
TP0634 DNA ligase (lig)chromosome CDS692381 2472 + 0.511731
TP0636 conserved hypothetical proteinchromosome CDS694887 771 - 0.511025
TP0643 DNA polymerase III, subunit epsilon (dnaQ)chromosome CDS704799 648 + 0.466049
TP0669 DNA polymerase III, subunit alpha (dnaE)chromosome CDS730608 3513 - 0.44378
TP0687 DNA recombinase (recG)chromosome CDS752821 2061 - 0.425036
TP0692 recA protein (recA)chromosome CDS758729 1224 - 0.510621
TP0704 single-stranded-DNA-specific exonuclease (recJ)chromosome CDS768570 2121 - 0.532296
TP0710 conserved hypothetical proteinchromosome CDS776685 1971 + 0.523085
TP0731 conserved hypothetical proteinchromosome CDS796674 711 + 0.589311
TP0770 ATP-dependent RNA helicasechromosome CDS835978 1950 + 0.534872
TP0775 endonuclease III (nth)chromosome CDS842892 636 + 0.551887
TP0810 DNA adenine methyltransferase (dam)chromosome CDS878660 912 + 0.550439
TP0898 ATP-dependent nuclease, subunit A, putativechromosome CDS975830 3720 - 0.579839
TP0899 T. pallidum predicted coding region TP0899chromosome CDS979546 588 - 0.537415
TP0913 conserved hypothetical proteinchromosome CDS991495 381 + 0.488189
TP0979 conserved hypothetical proteinchromosome CDS1062241 774 + 0.516796
TP0994 conserved hypothetical proteinchromosome CDS1078616 810 + 0.546914
TP1004 recombination protein (recR)chromosome CDS1092553 606 - 0.559406
TP1005 DNA polymerase III, subunits gamma and tau (dnaH)chromosome CDS1093232 1719 - 0.504363
TP1006 DNA gyrase, subunit B (gyrB)chromosome CDS1095009 1914 - 0.483804
TP1028 DNA helicase II (uvrD)chromosome CDS1121029 2013 - 0.554396
TP1029 T. pallidum predicted coding region TP1029chromosome CDS1123124 687 - 0.614265