Gene list
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COG category: Replication, recombination and repair
Organism: Streptococcus pneumoniae TIGR4, TIGR4; ATCC BAA-334
Gene type: CDS
Number of genes found: 143
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View as list | ||||
# Streptococcus pneumoniae TIGR4, TIGR4; ATCC BAA-334 >SP_0624 conserved hypothetical protein MSQIERIKQAIMADSQNASYTERGIEPLFAAPKTARINIIGQAPGLKTQE AGLYWKDKSGDRLRDWLGVDEDTFYNSGYFAVLPMDFYFPGHGKSGDLPP RTGFAEKWHPQVLQELPDIQLTLLIGQYAQAYYLQEKISGKVTERVKHYK DYLPAYFPLVHPSPRNQIWMAKNPWFEAEVVPDLKKRIKTIL >SP_0836 IS1167, transposase MEQLHFITKLLDIKDPNIKILDIINMDTHKEIIAKLDYEAPSCPDCGSLM KKHDFQKPSKIPYLETTGMPSRILLRKRRFKCYHSSKMMVAETPLVKKNH QIPRIINQKIAQKLIEKISMTDIAHQLAISTSTVIRKLNDFHFEHDFSRL PKIMSWDEYAFTKGKMSFIAQDFDNLNIITVLEGRTQAVIRNHFLRYDRA VRCQVKIITMDMFSPYYDLAKQLFPCAKIVLDRFHIIQHLSRAMSRFRVQ IMNQFERKSHEYKAIKRYWKLIQQDSRKLSDKRFYRPTFRMHLTNKEILD KILSYSEDLKHHYQIYQLLLFHFQNKDPEKFFGLIEDNLKQVHPLFQTVF KTFLKNKEKIVNALQLHYSNAKLEATNNLIKLIKRNAFGFRNFENFKKRI FIALNIKKERTKFVLSQA >SP_1582 IS1167, transposase MEQLHFITKLLDIKDPNIKILDIINMDTHKEIIAKLDYEAPSCPDCGSLM KKYDFQKPSKIPYLETTGMPSRILLRKRRFKCYHCSKMMVAETPLVKKNH QIPRIINQKIAQKLIEKISMTDIAHQLAISTSTVIRKLNDFHFEHDFSRL PKIMSWDEYAFTKGKMSFIAQDFDNLNIITVLEGRTQAVIRNHFLRYDRA VRCQVKIITMDMFSPYYDLAKQLFPCAKIVLDRFHIIQHLSRAMSRFRVQ IMNQFERKSHEYKAIKRYWKLIQQDSRKLSDKRFYRPTFRMHLTNKEILD KILSYSEDLKHHYQIYQLLLFHFQNKDPEKFFGLIEDNLKQVHPLFQTVF KTFLKNKEKIVNALQLPYSNAKLEATNNLIKLIKRNAFGFRNFENFKKRI FIALNIKKERTKFVLSQA >SP_1444 IS1167, transposase MEQLHFITKLLDIKDPNIQILDIINKDTHKEIIAKLDYDAPSCPECGNQL KKYDFQKPSKIPYLETTGMPTRILLRKRRFKCYHCSKMMVAETSIVKKNH QIPRIINQKIAQKLIEKISMTDIAHQLSISTSTVIRKLNDFHFKHDFSCL PEIMSWDEYAFTKGKMSFIAQDFNNLNIITVLEGRTQAIIRNHFLKYDRA VRCRVKIITMDMFSPYYDLARQLFPCAKIVLDRFHIVQHLSRAMSRVRVQ IMNQLDRKSHEYKAIKRYWKLIQQDSRKLSDKHFYRPTFRMHLTNKEILN KLLSYSQDLKHHYQLYQLLLFHFQNKEPEKFFGLIEDNLKQVHPLFQTVF KTFLKDKEKIVNALQLHYSNAKLEATNNLIKLIKRNAFGFRNFENFKKRI FIALNIKKERTKFVLSRA >SP_0274 DNA polymerase III, alpha subunit, Gram-positive type MSNSFEILMNQLGMPAEMRQAPALAQANIERVVVHKISKVWEFHFVFSNI LPIEIFLELKKGLSEEFSKTGNKAVFEIKARSQEFSNQLLQSYYREAFSE GPCASQGFKSLYQNLQVRAEGNQLFIEGSEAIDKEHFKKNHLPNLAKQLE KFGFPTFNCQVEKNDVLTQEQEEAFHAENEQIVQAANEEALRAMEQLEQM APPPAEEKPAFDFQAKKAAAKPKLDKAEITPMIEVTTEENRLVFEGVVFD VEQKVTRTGRVLINFKMTDYTSSFSMQKWVKNEEEAQKFDLIKKNSWLRV RGNVEMNNFTRDLTMNVQDLQEVVHYERKDLMPEGERRVEFHAHTNMSTM DALPEVEEIVATAAKWGHKAVAITDHGNVQSFPHGYKAAKKAGIQLIYGM EANIVEDRVPIVYNEVEMDLSEATYVVFDVETTGLSAIYNDLIQVAASKM YKGNVIAEFDEFINPGHPLSAFTTELTGITDDHVKNAKPLEQVLQEFQEF CKDTVLVAHNATFDVGFMNANYERHDLPKISQPVIDTLEFARNLYPEYKR HGLGPLTKRFGVALEHHHMANYDAEATGRLLFIFIKEVAEKHGVTDLARL NIDLISPDSYKKARIKHATIYVKNQVGLKNIFKLVSLSNTKYFEGVPRIP RTVLDAHREGLILGSACSEGEVFDVVVSQGVDAAVEVAKYYDFIEVMPPA IYAPLIAKEQVKDMEELQTIIKSLIEVGDRLGKPVLATGNVHYIEPEEEI YREIIVRSLGQGAMINRTIGHGEHAQPAPLPKAHFRTTNEMLDEFAFLGE ELARKLVIENTNALAEIFESVEVVKGDLYTPFIDKAEETVAELTYKKAFE IYGNPLPDIVDLRIEKELTSILGNGFAVIYLASQMLVQRSNERGYLVGSR GSVGSSFVATMIGITEVNPLSPHYVCGQCQYSEFITDGSYGSGFDMPHKD CPNCGHKLSKNGQDIPFETFLGFDGDKVPDIDLNFSGEDQPSAHLDVRDI FGEEYAFRAGTVGTVAAKTAYGFVKGYERDYGKFYRDAEVERLAQGAAGV KRTTGQHPGGIVVIPNYMDVYDFTPVQYPADDVTAEWQTTHFNFHDIDEN VLKLDVLGHDDPTMIRKLQDLSGIDPNKIPMDDEGVMALFSGTDVLGVTP EQIGTPTGMLGIPEFGTNFVRGMVDETHPTTFAELLQLSGLSHGTDVWLG NAQDLIKQGIADLSTVIGCRDDIMVYLMHAGLEPKMAFTIMERVRKGLWL KISEEERNGYIEAMKANKVPEWYIESCGKIKYMFPKAHAAAYVMMALRVA YFKVHHPIYYYCAYFSIRAKAFDIKTMGAGLEVIKRRMEEISEKRKNNEA SNVEIDLYTTLEIVNEMWERGFKFGKLDLYCSQATEFLIDGDTLIPPFVA MDGLGENVAKQLVRAREEGEFLSKTELRKRGGLSSTLVEKMDEMGILGNM PEDNQLSLFDELF >SP_1149 IS630-Spn1, transposase Orf1 MWYNLLMAYSIDFRKKVLSYCERTGSITEASHVFQISRNTIYGWLKLKEK TGELNHQVKGTKPRKVDRDRLKNYLTDNPDAYLTEIASDFGCHPTTIHYA LKAMGYTRKKNHTYYEQDPEKVALFLKNFNSLKHLTPV >SP_0643 transposase family protein, truncation MDNAIWHKSSTLKIPTNIGFAFIPPYTPEMNPIEQVWKEIRKRGFIVK >SP_0901 hypothetical protein MELKDFTEKEQEMIKKRLTMSNISDKETTEKILALVPQDLIKRIPFFVRK HATTRTIKRISIEYPELYAVAQTSGEIPEKKREELRQIITTIFEQKMNKH SIK >SP_0915 putative IS1239, transposase MQNHYTTKGEHLTIDSRRLIERWKKEGKSNREIASLLGKVPQTIHTEIKR GTVRQCLGKGRFKEVYSADYAQQSYENNRKRSVKKSSLTKELKEKILHYH NQKFSPEMMVMAKGVNVGISTIYYWIHHGKLGLSKQDLLYPRKGKALKKQ ASTNFKPAGQSIEQRLEAINFRLENGHYEIDTVLLTRAKNYCLLVLTDRK SRHQIIRLIPNKSADVVNQALKLILKQHKILSITADNGTEFNRLSNVFSE EHIYYAHPYASWERGTNENHNRLIRRWLPKGTKKMTPKEVAFIEKWINNY PKKCLDYKSPREDFLMANLNLKFSVRNKSRN >SP_1791 integrase-related protein MTKSQILGHKDISMLIDVYGHTLEEKISEEFMAVKSLL >SP_1806 conserved domain protein MNERYQCLKTKEYQALLSSKGRQIFAKRKIDMKSVFGQIKVCLGYKRCHL RGKRQVRIDMGFVLMANNLLKYNKRKRQN >SP_1990 primase-related protein MKEKISQVIVVEGRDDTVNLKRYFDVETYETRGSAINAQDIERIQRLHQR HGVIVFTDPDFNGERIRRMIMMVIPTVQHAFLKRDEAVPKSKTKGRSLGI EHASYEDLKTALAQVTEQFEHESQFDISRSDLIRLGFLAGADSRKRREYL GETLRIGYSNGKQLLKRLELFGVTLAEVEEAMKSYE >SP_1496 transposase, IS630-Spn1 related, Orf2 MIYKKSMTSDFFVEWFKTQLLPALKTPHVIVMGNAGFHPKNILDELCIQD KHFFLPLPPYSPDLNPIEQAWAILKKKVTDVLREVPTIFECLECFFKTR >SP_2079 IS1381, transposase OrfB MKAQAIVTSQGRIVSLDIAVNYCHDMKLFKMSRRNIGQAGKILADSGYQG LMKIYPQAQTPRKSSKLKPLTVEDKAYNHALSKERSKVENIFAKVKTFKM ISTTYRNHRKHFGLRMNLIAGIINHELGF >SP_0794 MutT/nudix family protein MEIKNHFGVYCVCFENGKLLCIEKTRGPYQHRYDLPGGSQQLGEGLTETL TREVMEETGFTVRSYSNPRIYDVFVREELKNFMVHHVIALYDVEMNESAP QVTISEAVSDGANDSLGYIWMDIQEITEENASPLVLKVKSELLGFPELDK TSYMNWKVNDEKSTCP >SP_1586 putative ATP-dependent RNA helicase MKFNELNLSADLLAEIEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTG KTAAFGLPTLEKIRTEEATIQALVIAPTRELAVQSQEELFRFGRSKGVKV RSVYGGSSIEKQIKALKSGAHIVVGTPGRLLDLIKRKALKLQDIETLILD EADEMLNMGFLEDIEAIISRVPENRQTLLFSATMPDAIKRIGVQFMKAPE HVKIAAKELTTELVDQYYIRVKEQEKFDTMTRLMDVAQPELAIVFGRTKR RVDELTRGLKIRGFRAEGIHGDLDQNKRLRVLRDFKNGNLDVLVATDVAA RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKSGQSITFVAPNEMGY LQIIENLTKKRMKGLKPASVEESFQSKKQVALKKIERDFADETIRANFEK FGKDARKLAAEFTPEELAMYILSLTVQDPDSLPEVEIAREKPLPFKPSGN GFGGKAKGGRGGRRGDDRRERDRRGNGRRDEFKKGSRGNDRFDKEKRYRK DNKKPRNTLSEKQTGFVIRNKGDK >SP_2208 putative helicase MKVNLDYLGRLFTENELTEEERQLAEKLPAMRKEKGKLFCQRCNSTILEE WYLPIGAYYCRECLLMKRVRSDQTLYYFPQEDFPKQDVLKWRGQLTPFQE KVSEGLLQVVDKQKPTLVHAVTGAGKTEMIYQVVAKVINAGGAVCLASPR IDVCLELYKRLQQDFSCGIALLHGESEPYFRTPLVVATTHQLLKFYQAFD LLIVDEVDAFPYVDNPMLYHAVKNSVKENGLRIFLTATSTNELDKKVRLG ELKRLNLPRRFHGNPLIIPKPIWLSDFNRYLDKNRLSPKLKSYIEKQRKT AYPLLIFASEIKKGEQLAEILQEQFPNEKIGFVSSVTEDRLEQVQAFRDG ELTILISTTILERGVTFPCVDVFVVEANHRLFTKSSLIQIGGRVGRSMDR PTGDLLFFHDGLNASIKKAIKEIQMMNKEAGL >SP_0989 MutT/nudix family protein MEFEEKTLSRKEIYQGPIFKLVQDQVELPEGKGTAQRDLIFHNGAVCVLA VTDEQKLILVKQYRKAIEAVSYEIPAGKLEVGENTAPVAAALRELEEETA YTGKLELLYDFYSAIGFCNEKLKLYLASDLTKVENPRPQDEDETLEVLEV SLEEAKELIQSGHICDAKTIMAVQYWELQKK >SP_0344 IS630-Spn1, transposase Orf2 MVAGLTNGELIAPITYEETMTSDFFEAWFQKFLLPTLNTPSVIIMDNARF HRMGKLELLCEEFGYKLLPLPPYSPEYNPIEKTWAHIKKHLKKVLPSCNT FYEALLSCSCFN >SP_0993 exonuclease MERLEDYIAFDLEFNQHEGQTHLIQVSAVRFRDGREIDAYDSYVHTSVPL KSFINGLTGITAETLKDAPPVEKVLEEFQEFVGSLLMIGYNAAKSDLPIL AEHGLDYSQQYKVDLYDEAFERRSSDLHGIANLKLQTVASFLGFQGQSHN SLEDARMTARVYESFLESDQARELLETESSLSNNPFGGLDLSQLFD >SP_0506 integrase/recombinase, phage integrase family MKDFELHLKKAGLAENTVRSYLYGVRFFLENYELKMEDLFEYKGYLLDNF KPKTVNLRLQGVNKYLAFIGHDDLKLKFVKVQQKPFLEDVISHADYLFLK RSLKKDGILKWHFVVWFLGATGARVSELIKLKVEHVEIGYFDIYSKGGKI RRLYIPKKLRNSCLSWLESENRRSGYLFLNKFNEPITARGVAQQLKNYAD KYKMNPKVIYPHSFRHLFAKNFLAKYNDIALLADLMGHESIETTRIYLRK TATEQQNIVDKIVNW >SP_1137 putative GTP-binding protein MKSLQSSLGNIETFKLDELCPKHEIQLTQIKGERHVVVGWNENGEAIKEV RCIPPYCEQCQEEQKKQDEEDAIADNLNAKLYMQTYNVLMSNKSYVADEF KTKTFDDFNAVTSEEKRFLEFAKGQVQKYLDGMRGNTLITGGTGIGKTLL SVAIAKGINEGYKTKGEPKSVLFVSLTEMIKQIKEGWNYGKGATLTEFEA TELMKSVDYLIIDDLGAKNAVIKPKSDWEQDLLFDVLNNRENTIFNTNLD SDELKIVYNERNYSRILKGLEGNTFKAFGIKYKRYSLNQLKSNM >SP_0575 putative helicase MYLFGESDHYLWLPRGLLYPLQDKFKQVSVEDRRKVQRSISVEFKGELTF EQELALSDMTSKENGLLHAETGFGKTVLGAALISERKTKTIILVHNKQLL DQWLDRLNCFLTFEEEEAIRYTASGREKVIGYVGQYGGTKKWLSKLVDVV MIQSLFKLENSQSLLDEYEMMIVDECHHVSALMFEKVVAQFRGKYLYGLT ATPERKNGHEPIVFQRIGEILHTADKRETDFKRQLQLRFTSFGHLEIEKT KASNFIQLSDWIATDSVRNQMILKDILAQVAEGRNILVLVNRIQQIDVFE KLLKEKEVDDCYIISGKTKVRERTSLLETLEQLDKGFVLLSTGKYIGEGF DLPQLDTLILAAPFSWKNNLIQYAGRIHRNYKDKSLVRIFDYVDIHVPYL EKMFQKRQVAYRKMDYRVIEGEEKQFVYVDSRYEKVLREDLAGERQECLL ILPYVHQTKLMNFLKEFRISQIEICIPETVANKAWLDQLKSQKIKVSFTQ SKIVTPILLVNKTIVWYGAMPLLGKVDEMTILRLESASIVSELVAGLR >SP_1485 IS3-Spn1, transposase MTEFSLDILLKAIKLARLTYYYHLKQLDKPDKDQELKAEIQSIFIEHKGN YAYRRIYLELRNRGYLVNHKRVQGLIKVLNLQAKMRQKRKYSSHKGDVGK KAENLIQGQFEGSKTMEKCYTDVTEFAIPASTQKLYLSPVLDGFNSEIIA FNLSCSPNLEQVQTMLEQAFKEKHYENTILHSDQGWQYQHDSYHRFLESK GIQASMSRKGNSQDNGRMESFFGILKSEMFYGYEKTFKSLNQLEQAIIDY IDYYNNKKIKIKLKGLSPVQYRTKSFG >SP_1147 integrase/recombinase, phage integrase family, truncation MSKSLQRANERLKKPIPKHLSPHIFRHTTISILSENKIPLKTITDRVGHP DSEVTTSIYTHVTKNMKDEAINVLDKVMKKIF >SP_1783 MutT/nudix family protein MELEISDFTGCKIALFCGDKLLTILRDDKASIPWANMWELPGGGREGDES PFECARREVYEELGIHLDEDCLLWSKIYPSVIFKGKKSVFMVGQLRQEQF DNIIFGDEGQGYQLMNVEEFLSSSQVVPQLQERLKDYLKVSD >SP_0363 transposase family protein, truncation MDNAIWHKSSTLKIPTNIGFAFIPPYTPEMNPIEQVWKEIRKRGFKNKAF RTLEDVMNQLQDVIQGLEKEVIKSIVNRRWTRVLFESR >SP_0460 IS1167, transposase MEHINHTTLLIGIKDKNITLNKAIQHDTHIEVFATLDYHPPKCKHCKGKQ IKYDFQKPSKIPFIEIGGFPSLIHLKKRRFQCKSCRKVTVAETTLVQKNC QISEMVRQKIAQLLLNREALTHIASKLAISTSTSTSTVYRKLKQFHFQED YTTLPEILSWDEFSYQKGKLAFIAQDFNTKKIMTILDNRRQTTIRNHFFK YSKEARKKVKVVTVDMSGSYIPLIKKLFPNAKIVLDRFHIVQHMSRALNQ TRINIMKQFDDKSLEYRALKYYWKFILKDSRKLSLKPFYARTFRETLTPR ECLKKIFTLVPELKDYYDLYQLLLFHLQEKNTDQFWGLIQDTLPHLNRTF KTTLSTFICYKNYITNAIELPYSNAKLEATNKLIKDIKRNAFGFRNFENF KKRIFIALNIKKERTKFVLSQA >SP_0538 IS1381, transposase OrfB MKTQAIVTSQGRIVSLDITVNYCHDMKLFKMSRRNIGQAGKILADSGYQG LMKIYPQAQTSRKSSKLKPLTVEDKACNHALSKERSKVENIFAKVKTFKM FSTTYRSHRKRFGLRMNLSAGIINHELGF >SP_0345 IS630-Spn1, transposase Orf1 MWYNLLMAYSIDFRKKVLSYCERTGSITEASHVFQISRNTIYGWLKLKEK TGELNHQVKGTKPRKVDRDRLKNYLTDNPDAYLTEIASEFGCHPTTIHYA LKAMGYTRKKEPHLL >SP_1575 conserved hypothetical protein MTYLDAFKSGTLVLPSALLLHFKELFPSSDDFLVWQFFYLQNTTGLEEMS PSQIAERIGKEISDVNQSISNLTERGLLQYRTIELNGEIELLFDASLALE RLDDLFGAVHSSSDQLTPQNQLKDLVETFQQELGRLLTPFEIEDLTKTLK EDGTSADLIKEALREAVLNGKPNWKYIQAILRNWRHEGIKSVAQIEAKRA EREASNPQLTQVSADFINAMDLWKD >SP_2015 IS630-Spn1, transposase Orf1 MWYNLFMAYSIDFRKKVLSYCERTGSITEASHVFQISRNTIYGWLKLKEK TGELNHQVKGIKPRKVDRDRLKNYLTDNPDAYLTEIASEFGCHPTTIHYT LKAMGYTRKKNHTYYEQDPEKVALFLKNFNSLKHLAPV >SP_2212 transposase family protein, truncation MDNAIWHKSSTLKIPTNIGFAFIPPYTPEMNPIEQVWKEIRKRGFKNKAF RTLEDVIQGLEKEVIKSIVNRRRTRMLFENR >SP_1622 transposase, IS200 family MREDNQSLSHTTWNCKYHIVFAPKYRRQIIYGRYKASIGRIIRDLCERKG VIIHEANACSDHIHMLISIPPKLSVSSFMGYLKGKSSLMIFDKHANLKYK YGNRKFWCRGYYVDTVGRNQKVIAEYIQNQLQEDRVADQLTLFESVDPFT GEINKRK >SP_0819 IS630-Spn1, transposase Orf2 MNGELIAPMTYEETMTSDFFEAWFQKFLLPTLTTPSVIIMDNARFHRMGK LELLCEEFGYKLLPLPPYSPEYNPIEKTWAHIKKHLKKVLPSCNTFYEAL LSCSCFN >SP_1928 IS1381, transposase OrfB MKAQAIVTSQGRIVSLDITVNYCHDMKLFKMSCRNIGQAGKILADSGYQG LMKICPQAQTPRKSSKLKPLTAEDKAYNHALSKERSKVENIFAKVETFKM FSTTYRNHRKRFGLRMNLIAGIINHELGF >SP_1442 IS66 family element, Orf2 MTIHLSSLGQVYLVCGKTDMRQGIDSLAYLVKTHFELDPFSGQVFLFCGG RKDRFKALYWDGQGFWLLYKRFENGKLTWPSTEKDVKALTPEQVDWLMKG FSITPKINLSESRDFY >SP_0802 DNA polymerase III, epsilon subunit/ATP-dependent helicase DinG MKTIGNRYVVVDLEATSTGSKAKIIQVGIVVIEDGEIVDHYTTDVNPHEP LDAHIKELTGLTDQRLAQAPDFSQVARKIFDLVEDGIFVAHNVQFDANLL AENLFFEGYELRNPRVDTVELAQVFFPELEKYSLPILCRELGIPLKHAHT ALSDAQATAELLLFLRKKMTQLPKGLLERLLEMADALLYESYLVIEETYR NQSILSSPDLVQVQGLYFKKTEASLEPRKLSQDFSKNISLLNLEVREEQE SFAKEVGLLLKDEPVSLIQAPTGIGKTYGYLLPALSQSKERQIVLSVPTK ILQNQIMEEEGKRLKEVFHTDIHSLKGPQNYLKLDAFYHSLQENDENRLF RRFKMQVLVWLTETETGDLDEIGQLYRYQHFLADLRHDGNLSSQSLFVTE DFWKRSQERAETCKLLVTNHAYLVTRLEDNPEFVSDRLLIIDEVQKILLA LENLLQETYDIQSIIDLIDKALVGEENRVQQRILESIRFECLYLIEQFQS GKSRKNILDSLDNLHQYFSELEVEDFDELVRYFTAEGDYWLEVTETSQKK IQISSTKSGRTLLSSLLPESCQVLGVSATLEISQRVSLADLLGYPEAKFV KIESRGKQEQEVVMVKDFPLVTETSLEVYAREVAALLVEIQAFQQPILVL FTAKDMLLAVSDLLTVSHLAQYKNGDVHQLKKRFEKGEQQILLGAASFWE GVDFSSHPSVIQVVPRLPFQNPQEPLTKKINQELNQEGKNAFYDYQLPMA IIRLKQALGRSMRREYQRSLTLILDRRIVGKRYGKQIVASLAEEATVKTI SRSEVDEAIDRFFNEL >SP_1136 conserved domain protein MTLDLDNMTQAEFDEVMAEIQLQSPNIFQLISDFVNKKVTSVEIDDLLNM KRAETGKALSPLQIQELQYMLEDFSPELIHEALKEAVSQGKANFAYIKVI LNRWKQDNLLTVELVRNSRAAREAKKQQTNQLEPTSYEDWIPTQEKPF >SP_1262 IS1167, transposase MEQLHFITKLLDIKDPNIQILDIINKDTHKEIIAKLDYDAPSCPECGNQL KKYDFQKPSKIPYLETTGMPTRILLRKRRFKCYHCSKMMVAETSIVKKNH QIPRIINQKIAQKLIEKISMTDIAHQLSISTSTVIRKLNDFHFKHDFSCL PEIMSWDEYAFTKGKMSFIAQDFNNLNIITVLEGRTQAIIRNHFLKYDRA VRCRVKIITMDMFSPYYDLARQLFPCAKIVLDRFHIVQHLSRAMSRVRVQ IMNQLDRKSHEYKAIKRYWKLIQQDSRKLSDKHFYRPTFRMHLTNKEILN KLLSYSQDLKHHYQLYQLLLFHFQNKEPEKFFGLIEDNLKQVHPLFQTVF KTFLKDKEKIVNALQLHYSNAKLEATNNLIKLIKRNAFGFRNFENFKKRI FIALNIKKERTKFVLSRA >SP_0119 MutT/nudix family protein MTQQDFRTKVDNTVFGVRATALIVQNHKLLVTKDKGKYYTIGGAIQVNES TEDAVVREVKEELGVKAQAGQLAFVVENRFEVDGVSYHNIEFHYLVDLLE DAPLTMQEDEKRQPCEWIDLDKLQNIQLVPVFLKTALPDWEGQLRHIHLE E >SP_0811 transposase family protein MYQDEAGFGRISKLGSCWAPIGVGPHIHSHYIREFRYCYGAVDAHTGESF FLIAGRCNTEWMNAFLEELSQAYPDDYLLLVMDNAIWHKSSTLKIPTNIG FTFIPPYTPEMNPIEQVWKEIRKRGFKNKAFQTLEDVMNQLQDVIQGLEK EVIKSIVNRRWTRMLFENR >SP_0086 IS630-Spn1, transposase Orf1, truncation MWYNPFMAYSIDFRKKVLSYCERTGSITEASHVFQISRNTIYGWLKLKEK TGELNHQV >SP_1129 integrase/recombinase, phage integrase family MNIKEKIKKNGQRVYYASVYLGVDQLTGKKARTTVTATTKKGVKVKARDA INTFAANGYTVKDKPTITTYNELVKVWWDSYKNTVKPNTRQSMEGLVRVH LLPVFGDYKLSKLTTPILQQQVNKWADKANKGEKGAFANYSLLHNMNKRI LKYGVAIQVIQYNPANDVIVPRKQQKEKAAVKYLDNKELKQFLDYLDALD QSNYENLFDVVLYKTLLATGCRISEALALEWSDIDLESGVISINKTLNRY QEINSPKSSAGYRDIPIDKATLLLLKQYKNRQQIQSWKLGRSETVVFSVF TEKYAYACNLRKRLNKHFDAAGVTNVSFHGFRHTHTTMMLYAQVSPKDVQ YRLGHSNLMITENTYWHTNQENAKKAVSNYETAINNL >SP_2138 IS1381, transposase OrfB MKAQAIVTSQGRIVSLDITVNYCHDMKLFKMSCRNIGQAGKILADSGYQG LMKICPQAQTSRKSSKLKPLTAEDKAYNHALSKERSKVENIFAKVKTFKM FSTTYRNHRKRFGLRMNLIAGIINHELGF >SP_0941 IS1381, transposase OrfB MKAQAIVTSQGRIVSLDIAVNYCRDMKLFKMSRRNIGQAGKILSDSGYQG LMKIYPQVQTPRKSSKLKPLTAEDKACNHALSKERSKIENIFAKVKTFKM FSTIYRNHRKRFGLRMNLIAGIINHELGF >SP_1040 site-specific recombinase, resolvase family MSKEKIKVYLYTRVSTSIQIEGYSLEAQKSRMKAFAIYNDYEIVGEYEDA GKSDKSIEGRIQFNRMMEDIKSGKDGVSFVLVFKLSRFARNAADVLSTLH IMQDYGVNLICVEDGIDSSKDAGKLMISVLSAVAEIERENISIQTMEGRI QKAGEGKWNGGFAPYGYKLEDGKLFINEEEAVAIRTIFDQYVNTTIGANG ISKYLENHGIRKIPRQNGKNPLFDAGLIRKILKNPVYNGKIAFGRRTLEK VHGTRNEYKQVEQDEYLISEGIHEAIVSDEVWQAAQVKLKSQAKKYEHVN KGKDTRTHLLSGIVKCPICGVGMFGNKCIKKKKDGTKYKDFYYYGCNHRQ MIRGNKCTFSKQIREELLDDAVAEVIVKIVSNPKFASMMQEKINMKVDTS EIEKEIDNYQKELRKSHSTKFKLIEEIDNLDVEDKHYKRRKQDLDDRLYR MYDKLDELESSLIDAKAKKQTIEAEKLTGDNIYKVLIYFDKLYKVMNDVE RRQLISALISEIQVYEEKQSNGQWLKSITFKLPIIEENLNIGLDNDEQVE CVSLLEKRS >SP_0373 conserved hypothetical protein MKKEFNLIATVAAGLEAVVGREVRELGYDCQVENGRVRFQGDVRAIIETN LWLRAADRIKIIVGTFPAKTFEELFQGVFALDWENYLPLGARFPISKAKC VKSKLHNEPSVQAISKKAVVKKLQKHYARPEGVPLMENGPEFKIEVSILK DVATVMIDTTGSSLFKRGYRTEKGGAPIKENMAAAILQLSNWYPDKPLID PTCGSGTFCIEAVMIARKMAPGLRRSFAFEEWNWISDRLIQEVRTEAAKK VDRELELDIMGCDIDARMVEIAKANAQVAGVAGDITFKQMRVQDLRSDKI NGVIISNPPYGERLSDDAGVTKLYAEMGQVFAPLKTWSKFILTSDEAFES KYGSQADKKRKLYNGTLKVDLYQYFGQRVKRQEVK >SP_1086 IS1381, transposase OrfB MKAQAIVTSQGRIVSLDIAVNYSHDMKLFKMSRRNIEQAGKILADSGYQG LMKIYPQAQTPRKSSKLKPLTAEDKAYNHALSKERSKVENIFAKVKTFKI FSTTYRNHRKRFGLRMNLSAGIINHELGF >SP_1596 IS3-Spn1, hypothetical protein, interruption MKLTYDDKVQIYELRKQGYSLEKLSNKFGINNSNIRYMIKLIDRYGIEFV KKGKNRYYSPDLKQEMINPKSFIPLSTRCNLQNP >SP_0401 putative helicase MEVYFSGTIERIIFENPSNFYRILLLEIDDTDAEDFDDFEIIVTGTMADV IEGEDYTFWGQIVQHSKYGEQLQISRYDRAKPTSKGLVKYFSSSHFKGIG LKTAQKIVDTYGENTIDEILQHPEKLEGIAGLSAKNREAFVSTLRLNYGT EMILAKLANYGIPNKLAFQIQDFYKEETLDVVENYPYQLVEDIKGLGFTI ADQLAEELGIESQAPERFRAGLVHSLFQACMETGDTYVEARDLLEQTLTL LESSRPVELDPSQVAQELSYLIEEDKVQQIDTKIFDNSLFFAEEGIRSHL VRILEKGKQKSHDLETIQKHITTVEQELGIEYDNIQKQAICDAIQNKVFI LTGGPGTGKTTVINGIIAVYALLEGLDFRKKSNLPILLAAPTGRAARRMN ELTGLPSATIHRHLGMTGDDDTSHLEDYLDADFIIVDEFSMVDTWLANQL FSNISSNSKILIVGDSDQLPSVSPGQVLADLLHIPLIPQTRLEKIYRQSK ESTIVTLASQIRQGILPADFTQKKADRSYFEIASGHIPATIEKILGAALR NGIPARDIQVLAPMYRGTAGIDAINQLMQDLLNPPQKDQLSFEAPQCHYR KRDRVIHLVNDAEINVFNGDLGAITDLIPGKYTESKQDEIVIDFDGNEVS YPRNEWYKIRLAYAMSIHKSQGSEFPVVILPITSASRRMLERNLIYTAIT RAKSKLILLGELQAFDYATQHIGTARKTYLIERFSDLLENVEEKQQAVSE TVTSSASEQSYILTEENWDRIPAMIGITDTDLKEIFGK >SP_1222 putative type II restriction endonuclease MLMTIDISEESLAKESADLLKILLKDRTTKKSIVWATHSYELLGKGFAPS DRINPSKVTGNFANLIQPRSEKSKYEQKDRTKIRAEVFTPTWLVAKQNGY VESKLGSLSLEEYVDLRWLEVTCGEAPYMVTRYDTVTGEEIPLSERVGFV DRKLQRISREVSDEVTFYKLVKDAYHASYGYEYQGDSLLLARENLLATFE DYYLAKTGNQPTLEQKKEIATIISYNVFQMDGLKKSSPYSAKQKQSQQLS LFADELEVQEVEESKTHIKDWKKNRMIGFERLSSEESEMKFDVVIGNPPY QETGEARDEPIYHYFIDEAYKIADKSILITPARFLFKAGQTPKNWMEKML EDKHLKVQFYELKSGKVFTGTDIKGGVAITYRDVDKDLGPIGVFTIFETL NGIVKKIEKHPEFETFSDLVYPQGIYRFSNKLFSDYPNAEKLQGKGTKNK IVSKSLTQLDFVFKNNEEKDHVALLGRIGSERVYRYINKKYLDLPETFEN YNVFVPEANGSGALGEVLSTPLIGEPLIGHTDTFLSIGNFKTKFEADACI KFIKTKFARVLLGVLKVTQHNSRKTWYYVPLQDFTVNSDIDWTQSVTDID RQLDQKYDLSPEEIAFIENHVREMD >SP_1712 hypothetical protein MKPIDRFSYLKNNRVSQDTSSLVQCYLPIIGQEALSLYLYTISFWDNGRK EYLFSSILNHLNFGMDRLIKSLKILSAFNLLTLYQKGDVYQLALHAPLSS QDFLGHPVYRRLLEKKIGDVAVEDLKVESADGEEIPVSLNQVFPELAELG SQEDLGLKKKVANDFDLEHFRQLMARDGLRFADEQSDVLNLFAIAEEKKW TWFETYQLAKSTAVSQVISTKRMREKIAQKPVSSDFSLKEATIIKEAKSK TALQFLAEIKQTRKGTITQTERELLQQMAGLGLLDEVINIILLLTFNKVD SANINEKYAMKVANDYAYQKIHSAEEAVLRIRDRGQKAKTQKQNQTAPEK TNVPKWSNPEYKNETSEETRLELERKKQELLARLEKGGD >SP_1302 conserved hypothetical protein MGKSYKEIIELLDCNQTTIWRNVKKYEEFGLDSLLQETRGGRNHAYMTVE EEKAFLARHLKATEAGEFVTIDALFQVYKKECG >SP_1969 putative type II DNA modification methyltransferase MKIVSGIYGGRPLKTLEGKTTRPTSDKVRGAIFNMIGPYFEVGRVLDLYA GSGGLSIEAVSRGMSSAVLVERDRKAQTIVAENIQMTKEVGKFQLLKMDA ERALEQVSGEFDLVFLDPPYAKEQIVADIEKMAERELFSEDVMVVCETDK AVELPEEIACLGIWKEKIYGISKVTVYVR >SP_0817 MutT/nudix family protein MNTDYIARYGVYAVIPNPEQKQIVLVQEPNGAWFLPCGEIEAGENHQEAL KHELIEELGFTAEIGTYYGQADEYFYSRHRDTYYYNPAYLYEATPFKEVQ KPLENFNHIAWFPIDEAIKNLKRGSHKWAIESWKKQHKIG >SP_0569 type II DNA modification methyltransferase, truncation MGKIVAIDLFNGAGGTTSGLKKSGIDVQVAVEIDSVAVKTYKLNNPEVSV IDME >SP_1523 Snf2 family protein MAKLIPGKIRIEGVALYETGKVDIIKEKNNRLYARVAEEELRYSLEDDLV FCACDFFQKRGYCVHLAALEHFLKNDERGQEILWSLEEGHEEKEAVETKV TLGGKFLDRILSPKSECAYELSAVGQVEAGTNHILWTLRIGQINSQKYYV IRDIPLFLRIVEQRKSYMIGKIYEESLSWEAFDDASQELLTFLHGLTEEG LVPDLFFQNQGRHLFFPLTFFEQGVNLLMALPHFQFDHQVDSYQTLLFQD MHADANLFAFTVTEYSDYFEMEISESPRVNVFYQGAVLFHKGQVYFLTDQ QMRLLKEIKALPVGQQGKKYLQFDSSDRDKLASCLTLFIQMGTVSAPERL QIKTFAPSFYFDREEDNRIRLEIQFDYGNRQVSSRQELEELPFSSDADLE ERIFQVCLAAGFEADFQSWRQALKAESVYHFFHDIIPVFEKLGHVDLSDK LEELYSLASPQVQIASKGGLLEIQFDFQNIVQEEIDQAMQALVANQDFYI DSSNQVYFFDEETKKIRQNLQELGQFELKDGTLQARKSLAYSLAHLFEGR DRVSFSQEFQNLAQDLTHPEDFPLQATQVKADLRDYQEKGIGWLQMLHHY GFGGILADDMGLGKTLQTIAFLTSQVTKESRVLILAPSGLIYNWADEFQK FAPQLDVTVVHGLKASREEILAESHQIYVTSYATFRQDSEFYQGMAFDFL FLDEAQVMKNAQTKIAQTLRQFVVPSVFALSGTPIENHLGELWSIFQIVM PGLLPSKKEFMKLPAERVAQFIKPFVMRRKKEEVLTELPDLIEVVYKNEL EDQQKAIYLAQLQQMRDHLAQVSEQEFQRSRVEILSGLMRLRQICDTPAL FMEDYQGASGKLDSLRDLLVQVADGGHRVLIFSQFKGMLEKIEQELPDLG LTSFKITGSTPAKERQDMTKAFNQGERDAFLISLKAGGVGLNLTGADTVI LVDLWWNPAVEAQAIGRAHRMGQEETVEVYRLVTKGTIEEKIQELQEQKK HLVSQVLDGTESRGSLTLAEIREILGISEAST >SP_0406 MutS2 family protein MNKKILETLEFDKVKALFEPHLLTEQGLEQLRQLAPTAKADKIKQAFAEM KEMQALFVEQPHFTILSTKEIAGVCKRLEMGADLNIEEFLLLKRVLLASR ELQNFYTNLENVSLEELALWFEKLHDFPQLQGNLQAFNDAGFIENFASEE LARIRRKIHDSESQVRDVLQDLLKQKAQLLTEGIVASRNGRQVLPVKNTY RNKIAGVVHDISASGNTVYIEPREVVKLSEEIASLRADERYEMLRILQEI SERVRPHAAEIANDAWIIGHLDLIRAKVRFIQERQAVVPQLSENQEIQLL HVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQS GLPILADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVN QHSLLLLDELGAGTDPQEGAALAMAILEDLRLRQIKTMATTHYPELKAYG IETAFVQNASMEFDTATLRPTYRFMQGVPGRSNAFEIAKRLGLSEVIVGD ASQQIDQDNDVNRIIEQLEEQTLESRKRLDNIREVEQENLKMNRALKKLY NELNREKETELNKAREQAAEIVDMALSESDQILKNLHSKSQLKPHEIIEA KAKLKKLAPEKVDLSKNKVLQKAKKKRAPKVGDDIVVLSYGQRGTLTSQL KDGRWEAQVGLIKMTLEEKEFDLVQAQQEKPVKKKQVNVVKRTSGRGPQA RLDLRGKRYEEAMNELDTFIDQALLNNMAQVDIIHGIGTGVIREGVTKYL QRNKHVKSFGYAPQNAGGSGATIVTFKG >SP_0917 pilin gene inverting-related protein MLYVGIDVAKNKHDVTALNVPGKTVLKPLTFSNNKAGFELLDLSLRQLNQ DCLIALENTGHYAFNLLNFLHEQGYKVYTYNPLLIKKFAKSLSLRKTKTD KKDAHGIALKLLSDPNREQFQHDNRQVELKILARHIHRLKKKQSDWKVQY TRCLDIIFPELDKIVGKHSEYTYQLLTRYPNPQKRLEAGFDKLIEIKRLT ASNSRAFCRALKSSPNHQIEIRNSLDKTIDFSYSLSFS >SP_1195 IS1381, transposase OrfB MKAQAIVTSQGRIVSLDITVNYCHDMKLFKMSRRNIGQAGKILADSGYQG PMKIYPQAQTPRKSSKLKPLTVEDKAYNHALSKERSKVENIFAKVKTFKM FSTTYRNHRKRFGLRMNLIAGIINHELGF >SP_2045 conserved hypothetical protein MDFEKIEQAYTYLLENVQVIQSDLATNFYDALVEQNSIYLDGETELNQVK ENNQTLKRLALRKEEWLKTYQFLLMKAGQTEPLQANHQFTPDAIALLLVF IVEELFKEEEITILEMGSGMGILGAIFLTSLTKKVDYLGMEVDDLLIDLA ASMADVIGLQAGFVQGDAVRPQMLKESDVVISDLPVGYYPDDAVASRHQV ASSQEHTYAHHLLMEQGLKYLKSDGYAIFLAPSDLLTSPQSDLLKEWLKE EASLVAMISLPENLFANAKQSKTIFILQKKNEIAVEPFVYPLASLQDASV LMKFKENFQKWTQGTEI >SP_1431 putative type II DNA modification methyltransferase MTVLKGDNLEILKTIESSSIDLIYMDPPFFTQKTQKLSNNKNIMYSFEDT WTSIEDYKEFLSVRLEECKRVLKNSGSIFVHCDKIANHHIRLILDNIFGV DMFQSEIIWNYKRWSNSKKGLLNNHQNIYFYSKSKDFKFNTIFTEYSSTT NIDQILVERKRDGNSKTIYKVDNNGNYILAKEKNGVPLSDVWNIPFLNPK AKERVGYPTQKPILLLEQIIKIATDKNDIVLDPFCGSGTTLVASKILNRN YMGIDLSEEAINITQQRLENVIKTSSNLLNKGIEAYRTKTEEEENILKLL QAKIVQRNKGIDGFLPKHFQKKPIPIKIQKNNECLNESISLLQNAINSKK LDFGVVIKTHSDNLLFDFDTIPENIIVVDHFELTIEKWLSKSQQLL >SP_2014 IS630-Spn1, transposase Orf2 MVAGLTNGELIAPMTYEETMTSDFFEAWFQNFLLPTLNTPSVIIMDNVRF HRMGKLELLCEEFGHKLLPLPPYSPEYNPIEKTWAHIKKHLKKVLPSCNT FYEAFLSCSCFN >SP_0740 MutT/nudix family protein MNRREAVEFVNMCMIKNGDKVLVQDRVNPDWSGITFPGGHVERGESFVDA VIREVKEETGLIISKPQLCGIKNWYDDKDYRYVVLFYKTEHFTGELQSSD EGKVWWEDFENLSHLKLATDDMSDMLRVFLEEDLSEFFYYKNGDDWLYDL K >SP_1877 integrase/recombinase, phage integrase family MPMRDRISAFLEEKQGLSVNSKQSYKYDLEQFLDMVGERISETSLKIYQA QLANLKISAQKRKISACNQFLYFLYQKGEVDSFYRLELAKQAEKKTEKPE ILYLDSFWQESDHPEGRLLALLILEMGLLPSEILAIKVADINLDFQVLRI SKASQQRIVTIPTALLSELEPLMGQTYLFERGEKPYSRQWAFRQLESFVK EKGFPSLSAQVLREQFILRQIENKVDLYEIAKKLGLKTVLTLEKYR >SP_0300 IS630-Spn1, transposase Orf2 MVAGLTNGELIAPMTYEETMTSDFFEAWFQKFLLPTLTTPSVIIMDNARF HRMGKLELLCEEFGYKLLPLPPYSPEYNPIEKTWAHIKKHLKKVLPSCNT FYEALLSCSCFN >SP_0036 conserved hypothetical protein MIQSITSQGLVLYNRNFREDDKLVKIFTEQVGKRMFFVKHAGQSKLAPVI QPLVLARFLLRINDDGLSYIEDYHEVMTFPKINSDLFVMAYATYVAALAD ASLQDNQQDAPLFAFLQKTLELMEAGLDYQVLTNIFEIQILTRFGISLNF NECVFCHRVGQAFDFSFKYGACLCPEHYHEDKRRCHLNPNIPYLLNQFQA IDFETLETISLKPGIKQELRQFMDQLYEEYVGIHLKSKKFIDSLADWGQL LKEEKK >SP_1159 integrase/recombinase, phage integrase family MKREILLERIDKLKQLMPWYVLEYYQSKLAVPYSFTTLYEYLKEYDRFFS WVLESGISNADKISDIPLSVLENMSKKDMESFILYLRERPLLNANTTKQG VSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETL AARAENIKQKLFLGDETEGFLTYIDQEHPQQLSNRALSSFNKNKERDLAI IALLLASGVRLSEAVNLDLRDLNLKMMVIDVTRKGCKRDSVNVAAFAKPY LENYLAIRNQRYKTEKTDTALFLTLYRGVPNRIDASSVEKMVAKYSEDFK VRVTPHKLRHTLATRLYDATKSQVLVSHQLGHASTQVTDLYTHIVSDEQK NALDSL >SP_1266 putative DNA processing protein DprA MELFMKITNYEIYKLKKSGLTNQQILKVLEYGENVDQELLLGDIADISGC RNPAVFMERYFQIDDAHLSKEFQKFPSFSILDDCYPWDLSEIYDAPVLLF YKGNLDLLKFPKVAVVGSRACSKQGAKSVEKVIQGLENELVIVSGLAKGI DTAAHMAALQNGGKTIAVIGTGLDVFYPKANKRLQDYIGNDHLVLSEYGP GEQPLKFHFPARNRIIAGLCRGVIVAEAKMRSGSLITCERAMEEGRDVFA IPGSILDGLSDGCHHLIQEGAKLVTSGQDVLAEFEF >SP_1692 IS1167, transposase MEQLHFITKLLDIKDPNIQILDIINKDTHKEIIAKLDYDAPSCPECGNQL KKYDFQKPSKIPYLETTGMPTRILLRKRRFKCYHCSKMMVAETSIVKKNH QIPRIINQKIAQKLIEKISMTDIAHQLSISTSTVIRKLNDFHFKHDFSCL PEIMSWDEYAFTKGKMSFIAQDFNNLNIITVLEGRTQAIIRNHFLKYDRA VRCRVKIITMDMFSPYYDLARQLFPCAKIVLDRFHIVQHLSRAMSRVRVQ IMNQLDRKSHEYKAIKRYWKLIQQDSRKLSDKHFYRPTFRMHLTNKEILN KLLSYSQDLKHHYQLYQLLLFHFQNKEPEKFFGLIEDNLKQVHPLFQTVF KTFLKDKEKIVNALQLHYSNAKLEATNNLIKLIKRNAFGFRNFENFKKRI FIALNIKKERTKFVLSRA >SP_0016 IS630-Spn1, transposase Orf2 MVAGLTNGELIAPMTYEETMTSDFFEAWFQNFLLPTLNTPSVIIMDNVRF HRMGKLELLCEEFGHKLLPLPPYSPEYNPIEKTWAHIKKHLKKVLPSCNT FYEAFLSCSCFN >SP_0299 IS630-Spn1, transposase Orf1 MWYNLLMAYSIDFRKKVLSYCERTGSITEASHVFQISRNTIYGWLKLKEK TGELNHQVKGTKPRKVDRDRLKNYLTDNPDAYLTEIASEFGCHPTTIHYA LKAMGYTRKKEPHLL >SP_1639 IS1167, transposase MEQLHFITKLLDIKDPNIQILDIINKDTHKEIIAKLDYDAPSCPECGNQL KKYDFQKPSKIPYLETTGMPTRILLRKRRFKCYHCSKMMVAETSIVKKNH QIPRIINQKIAQKLIEKISMTDIAHQLSISTSTVIRKLNDFHFKHDFSCL PEIMSWDEYAFTKGKMSFIAQDFNNLNIINNLNIITVLKGRTQAVIRNHF LKYDRAVRCRVKIITMDMFSPYYDLARQLFPCAKIVLDRFHIVQHLSRAM SRVRVQIMNQFHRKSHEYKAIKRYWKLIQQDSRKLSDKRFYRPTFRMHLT NKEILDKLLSYSQDLKHHYQLYQLLLFHFQNKKPEKFFGLIEDNLKQVHP IFQTVFKTFLKDKEKIVNALQLHYSNAKLEATNNLIKLIKRNAFGFRNFE NFKKRIFIALNIKKERTKFVLSRA >SP_1061 putative protein kinase MNYEKYLNYLDYETEIEDAYHNLLLEYKISDNFSDEHWLYNLPSNITQSK GFKIHLSASILNANLVAKKFFDFIFSREKKINFKILVSIKELSLQNTGLN GYSQVGKFITIYPKDNKEFQRLLHKLEILYKGVKGVNIPSDFRFQLSEVV YYRYGEFVKDSTFKDKRDKKIPSNVNVPIRDYYIPRYNTIPDQYIILEVI SKNAKGGVYKVFNTQKRVYSLLKEASDLSLVDFTNRDSVNRLINEREILV ELEKEEFTPKVFNDFYIKNSYFVEFEFIIADKLSEYNMVSGSYDWFLTLI DYMEIINSKYNLSYRDLSFNNILIDNRNNIYIIDFEHALRKETQIEEKKL PLFGTPGFYETNLNLLNNQPEDIMGLVLLLYWSQNLDDFNVFSKMSFLEA MEYAMNFNSRRLDTLDKSDWLYDIYKKAFNYKYDTFSELKKDFIEVLK >SP_1064 transposase, IS200 family MREDNQSLSHTTWNCKYHIVFAPKYRRQIIYGRYKASIGRIIRDLCERKG VIIHEANACSDHIHMLISIPPKLSVSSFMGYLKGKSSLMIFDKHANLKYK YGNRKFWCRGYYVDTVGRNQKVIAEYIQNQLQEDRVADQLTLFESVDPFT GEINKRK >SP_1612 conserved domain protein MDLLEKECLKCDKNFQQGDIWNYYYLSDKMPAQGWKIHISSQIKDAVNIF KIVYKLSQLNNCSFKVVKNLEELKKINSPREMSPTANKFITLYPKSESEA KSMICNLTNRLSEFKAPKILSDYQCGMHSPVHYRYGAFLKKQAYDEKNKK VIYLLLDEKRKNYVEDKRQNFPSLPSWKMDLFSEEEKRIYFQTTCEVSSK DSAINKYKMEKIIKRSNKGNVYRAIRKSDGQKVIIKQSRPFVNYDAEGEW TALDDIKNEAHMLKKLADKSYTTNLTDEFYIVDDYFLVQEQVDGLNFEEF IRETEHSLNIREKTLDNIVNIVSYIHKLGI >SP_1148 IS630-Spn1, transposase Orf2 MVAGLTNGELIAPMTYEETMTSDFFEAWFQKFLLPTLTTPSVIIMDNARF HRMGKLELLCEEFGYKLLPLPPYSPEYNPIEKTWAHIKKHLKKVLPSCNT FYEAFLSCSCFN >SP_1483 ATP-dependent RNA helicase, DEAD/DEAH box family MKTKLPTEWQELSDQLGFQEFTPIQTQLFEPLLAGENLLGVSQTGTGKTL AYLLPSLLRLQKKKAQQLLILAPNTELAGQIFDVCKTWAEAIGLTAQLFL SGSSQKRQIERLKKGPEILIGTPGRIFELIKLKKIKMMNVETIILDEFDQ LLDDSQIHFVEKITHYAPRDHQLVYMSATTKFDQEKIVPNTRTIDLSDQK LDNIQHFYMQVDQRHRVDMLRKLAHVEDFRGLVFFNSLSDLGNAEEKLQY RDILAVSLASDVNVKFRKIILEKFKDNQLTLLLATDLLARGIDIDSLECV VNFDIPRDSETYTHRAGRTGRMGKEGYVITLVTHPEEIKKLKKFASIREI VLKNQELYIK >SP_1792 IS1167, transposase MEQLHFITKLLDIKDPNIQILDIINKDTHKEIIAKLDYDAPSCPECGNQL KKYDFQKPSKIPYLETTGMPTRILLRKRRFKCYHCSKMMVAETSIVKKNH QIPRIINQKIAQKLIEKISMTDIAHQLSISTSTVIRKLNDFHFKHDFSCL PEIMSWDEYAFTKGKMSFIAQDFNNLNIITVLEGRTQAIIRNHFLKYDRA VRCRVKIITMDMFSPYYDLARQLFPCAKIVLDRFHIVQHLSRAMSRVRVQ IMNQLDRKSHEYKAIKRYWKLIQQDSRKLSDKHFYRPTFRMHLTNKEILN KLLSYSQDLKHHYQLYQLLLFHFQNKEPEKFFGLIEDNLKQVPPLFQTVF KTFLKDKEKIVNALQLHYSNAKLEATNNLIKLIKRNAFGFRNFENFKKRI FIALNIKKERTKFVLSRA >SP_1235 MutT/nudix family protein MSRSQLTILTNICLIEDLETQRVVMQYRAPENNRWSGYAFPGGHVENDEA FAESVIREIYEETGLTIQNPQLVGIKNWPLDTGGRYIVICYKATEFSGTL QSSEEGEVSWVQKDQIPNLNLAYDMLPLMEMMEAPDKSEFFYPRRTEDDW EKKIF >SP_0275 conserved hypothetical protein MSKMSISIRLDSEVKEQAQQVFSNLGMDMTTAINIFLRQAIQYQGLPFDV RLDENRKLLQALTDLDQNRNMSQSFESVSDLMEDLRA >SP_1991 putative hydrolase MIFDTHTHLNVEEFAGREAEEIALAAEMGVTQMNIVGFDKPTIEHALELV DEYEQLYATIGWHPTEAGTYTEEVEAYLLDKLKHSKVVALGEIGLDYHWM TAPKEVQEQVFRRQIQLSKDLDLPFVVHTRDALEDTYEIIKSEGVGPRGG IMHSFSGTLEWAEKFVDLGMTISFSGVVTFKKATDLQEAAKELPLDKMLV ETDAPYLAPVPKRGRENKTAYTRYVVDFIADLRGMTTEELAVATTANAER IFGLDSK >SP_1790 ATPase, AAA family MPDNLALRMRPKTIDQVIGQEHLVGPGKIIRRMVEANRLSSMILYGPPGI GKTSIASAIAGTTKYAFRTFNATVDSKKRLQEISEEAKFSGGLVLLLDEI HRLDKTKQDFLLPLLESGLVIMIGATTENPFFSVTPAIRSRVQIFELEPL SNQDVKEALQIALSNPERGFDFPIELDEDALDFIATSTNGDLRSAFNSLD LAVLSTPENDEGIRHITLDIMENSLQRSYITMDKDGDGHYDVLSALQKSI RGSDVDASLHYTARLIEAGDLPSLARRLTVIAYEDIGLANPEAQIHTVTA LDAAQKIGFPEARILIANVVIDLALSPKSNSAYVAMDKALADLKTSGHLP IPRHLRDGHYSGSKELGNAQDYLYPHNYPGNWVKQDYLPEKIRNHHYFQA EDTGKYERALAQRKEAIDRLRKI >SP_0761 ATP-dependent RNA helicase, DEAD/DEAH box family MSFTKFQFKNYIREALKELKFTTPTEVQDKLIPIVLAGRDLVGESKTGSG KTHTFLLPIFQQLDEASDSVQAVITAPSRELATQIYQVARQISAHSDVEV RVVNYVGGTDKARQIEKLASNQPHIVIGTPGRIYDLVKSGDLAIHKAKTF VVDEADMTLDMGFLETVDKIAGSLPKDLQFMVFSATIPQKLQPFLKKYLS NPVMEKIKTKTVISDTIDNWLISTKGHDKNAQIYQLTQLMQPYLAMIFVN TKTRADELHSYLTAQGLKVAKIHGDIAPRERKRIMNQVQNLDFEYIVATD LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLPGTAITLYQPSD DSDIRELEKLGIKFSPKMVKDGEFQDTYDRDRRANREKKQDKLDIEMIGL VKKKKKKVKPGYKKKIQWAVDEKRRKTKRAENRARGRAERKAKRQTF >SP_1344 conserved hypothetical protein MDYNFNLEHPFFFTNNDYSTDTSIKYQVSLPFNWHEVMNNDEWVYQYPIG KFVERQGWKIHISSEYNSSHELLQDVAKICHEMRIPFKHLSTEDKFIMRN GKLVSRGFSGKFITCYPNQNELESVLQRLESALKQYNGPYILSDKRWDEA PIYLRYGVFRPSRDDEKKVAIDELIVGDEVVKDERLPVFKIPKGIVPPDF LNKWLDKKDKKQGDFPFIIDNAIRFSNSGGIYNARLKEDGKKIILKEARP YTGLGFDGTYSSEKLASECKALKILNEWSETPKIYWHGKIWEHTFLGIEH MKGVPLNRWVTNNFPLYEVVDKTKDYLLRVSKIVEKLIDLTNKFHSENVY HQDLHLGNILVKDEDEISIIDWEQAVFSNDEKVVHKVAAPGFRAWRETLP SEIDWYGIRQIAHYLYMPLVTTSDLTYNYVSQTRIEGKKLFESLGYTREH IDYVESLLSYLDSKCPQIENISRKKVLKPMHEIRTIESEQDIQDFIIKLL RGFTLTYGQWRKEFQSRFFPVHYYGLNFNQGIAFSDLAILWSYQQLAKKV KNFKFDDYYEIRTQVINEAVNNFKKSSLSGLFDGKIGTIWLIYEFGEIDR AVELFTTHFIEIFENSQNKNLYSGQAGILLVGLYFLSKGGIDNKLGEEIL IRLREYTLNYIENPETFCKVGASDVQSNDPYENFGGLLYGHAGVAWLFGE AYKLTGESIYKNGLELAVDKELVAYKVDSNNSLQYSQGHRLLPYLATGSA GLLLLINRNKEILSSKYLKYLTSLERATDVVFCVLPGLFNGFCGLEVANN IYSDIDDNFSGQKKLIEQLYRYLCVIEEGFVIAGDNGLKITTDIASGFAG VAIGLVSIMDNKLTILPQI >SP_1535 conserved hypothetical protein MDHKAYMYVLECRDGSYYIGYTTDMRRRLAIHNSGKGAKYTRARLPVKLI YAQGFASKEEAMSAEALLKRKKRPQKEEFLSENQDRNLLSYFEESWGVL >SP_0890 integrase/recombinase, phage integrase family MESKVTIIMQEMLPLLNNEQLLALRESLEHHLVDGKKQQKYSNNNLLQLF ITAKQVEGCSSKTIRYYQRTIENLFNAIKESVTQLTTDDLRSYLANYQSE KDCSKANLDNIRRILSSFFAWLEQEEYIIKNPIRRIKKIKTEQNVKETYT DEHLEIMRDNCENLRDLAIIDLLASTGMRVGELVQLNRSDIDFENRECVV FGKGKKERPVYFDARTKIHLRNYLNDRKDSHPALFVTLVGKVQRLGIAGV EIRLRKLGDKLGIQKVHPHKFRRTLATKAIDKGMPIEQVQKLLGHSKIDT TLAYAMVNQNNVKHSHQKFIS >SP_0015 IS630-Spn1, transposase Orf1 MWYNLLMAYSIDFRKKVLSYCERIGSITEASHVFQISRNTIYGWLKLKEK TGELNHQVKGTKPRKVDRDRLKNYLTDNPDAYLTEIASEFGCHPTTIHYT LKAMGYTRKKNHTYYEQDPEKVALFLKNFNSLKHLAPV >SP_0954 celA, competence protein CelA MEAIIEKIKEYKIIVICTGLGLLVGGFFLLKPAPQTPVKETNLQAEVAAV SKDSSTEKEVKKEEKEEPLEQDLITVDVKGAVKSPGIYDLPVGSRVNDAV QKAGGLTEQADSKSLNLAQKVSDEALVYVPTKGEEAVSQQTGSGTASSTS KEKKVNLNKASLEELKQVKGLGGKRAQDIIDHREANGKFKSVDELKKVSG IGGKTIEKLKDYVTVD >SP_0014 comX1, transcriptional regulator ComX1 MIKELYEEVQGTVYKCRNEYYLHLWELSDWEQEGMLCLHELISREEGLVD DIPRLRKYFKTKFRNRILDYIRKQESQKRRYDKEPYEEVGEISHRISEGG LWLDDYYLFHETLRDYRNKQSKEKQEELERVLSNERFRGRQRVLRDLRIV FKEFTIRTH >SP_2006 comX2, transcriptional regulator ComX2 MIKELYEEVQGTVYKCRNEYYLHLWELSDWEQEGMLCLHELISREEGLVD DIPRLRKYFKTKFRNRILDYIRKQESQKRRYDKEPYEEVGEISHRISEGG LWLDDYYLFHETLRDYRNKQSKEKQEELERVLSNERFRGRQRVLRDLRIV FKEFTIRTH >SP_0458 dinP, DNA-damage inducible protein P MSRKIIHIDMDAFFAAVEIRDNPKLRGKPVIIGSDPRQTGGRGVVSTCSY EARAFGVHSAMSSKEAYERCPQAVFISGNYEKYKSVGLQIRAIFKRYTDL IEPMSIDEAYLDVTENKLGIKSAVKIARLIQKDIWQELHLTASAGVSYNK FLAKMASDYQKPHGLTVILPEQAEDFLKQMDISKFHGVGKKTVERLHQMG VFTGADLLEVPEVTLIDRFGRLGYDLYRKARGIHNSPVKSNRIRKSIGKE KTYGKILLAEEDIKKELTLLSEKVALNLHQQEKAGKIVILKIRYEDFSTL TKRKSLAQKTQDASQISQIALQLYEELSKKERGVRLLGITMTGF >SP_0001 dnaA, chromosomal replication initiator protein DnaA MKEKQFWNRILEFAQERLTRSMYDFYAIQAELIKVEENVATIFLPRSEME MVWEKQLKDIIVVAGFEIYDAEITPHYIFTKPQDTTSSQVEEATNLTLYN YSPKLVSIPYSDTGLKEKYTFDNFIQGDGNVWAVSAALAVSEDLALTYNP LFIYGGPGLGKTHLLNAIGNEILKNIPNARVKYIPAESFINDFLDHLRLG EMEKFKKTYRSLDLLLIDDIQSLSGKKVATQEEFFNTFNALHDKQKQIVL TSDRSPKHLEGLEERLVTRFSWGLTQTITPPDFETRIAILQSKTEHLGYN FQSDTLEYLAGQFDSNVRDLEGAINDITLIARVKKIKDITIDIAAEAIRA RKQDVSQMLVIPIDKIQTEVGNFYGVSIKEMKGSRRLQNIVLARQVAMYL SRELTDNSLPKIGKEFGGKDHTTVIHAHAKIKSLIDQDDNLRLEIESIKK KIK >SP_2203 dnaC, replicative DNA helicase MAEVEELRVQPQDILAEQSVLGAIFIDESKLVFVREYIESRDFFKYAHRL IFQAMVDLSDRGDAIDATTVRTILDNQGDLQNIGGLSYLVEIVNSVPTSA NAEYYAKIVAEKAMLRRLIAKLTESVNQAYEASQPADEIIAQAEKGLIDV SENANRSGFKNIRDVLNLNFGNLEARSQQTTDITGIATGYRDLDHMTTGL HEEELIILAARPAVGKTAFALNIAQNIGTKLDKTVAIFSLEMGAESLVDR MLAAEGLVESHSIRTGQLTDEEWQKYTIAQGNLANASIYIDDTPGIRITE IRSRSRKLAQETGNLGLILIDYLQLITGTGRENRQQEVSEISRQLKILAK ELKVPVIALSQLSRGVEQRQDKRPVLSDIRESGSIEQDADIVAFLYRDDY YERGGEEEEGIPNNKVEVIIEKNRSGARGTVELIFQKEYNKFSSISKREA >SP_0895 dnaE, DNA polymerase III, alpha subunit MRRIEEKCKLIAQLDTKTVYSFMESVISIEKYVRAAKEYGYTHLAMMDID NLYGAFDFLEITKKYGIHPLLGLEMTVFVDDQGVNLRFLALSSVGYQQLM KLSTAKMQGEKTWSVLSQYLEDIAVIVPYFDRVESLELGCDYYIGVYPET LASEFHHPILPLYRVNAFESRDREVLQVLTAIKENLPLREVPLRSRQDVF ISASSLEKLFQERFPQALDNLEKLISGISYDLDTSLKLPRFNPARPAVEE LRERAELGLVQKGLTSKEYQDRLDQELSVIHDMGFDDYFLVVWDLLRFGQ SNGYYMGMGRGSAVGSLVSYALDITGIDPVEKNLIFERFLNRERYTMPDI DIDIPDIYRPDFIRYVGNKYGSKHAAQIVTFSTFGAKQALRDVLKRFGVP EYELSAITKKISFRDNLKSAYEGNLQFRQQINSKLEYQKAFEIACKIEGY PRQTSVHAAGVVISDQDLTNYIPLKYGDEIPLTQYDAHGVEASGLLKMDF LGLRNLTFVQKMQELLAETEGIHLKIEEIDLEDKETLALFASGNTKGIFQ FEQPGAIRLLKRVQPVCFEDVVATTSLNRPGASDYINNFVARKHGQEEVT VLDPVLEDILAPTYGIMLYQEQVMQVAQRLAGFSLGKADILRRAMGKKDA SAMHEMRASFIQGSLEAGHTVEKAEQVFDVMEKFAGYGFNRSHAYAYSAL AFQLAYFKTHYPAIFYQVMLNSSNSDYLIDALEAGFEVASLSINTIPYHD KIANKAIYLGLKSIKGVSNDLALWIIENRPYSNIEDFIAKLPENYLKLPL LEPLVKVGLFDSFEKNRQKVFNNLANLFEFVKELGSLFGDAIYSWQESED WTEQEKFYMEQELLGIGVSKHPLQAIASKAIYPITPIGNLSENSYAIILV EVQKIKVIRTKKGENMAFLQADDSKKKLDVTLFSDLYRQVGQEIKEGAFY YVKGKIQSRDGRLQMIAQEIREAVAERFWIQVKNHESDQEISRILEQFKG PIPVIIRYEEEQKTIVSPHHFVAKSNELEEKLNEIVMKTIYR >SP_1072 dnaG, DNA primase MVDKQVIEEIKNNANIVEVIGDVISLQKAGRNYLGLCPFHGEKTPSFNVV EDKQFYHCFGCGRSGDVFKFIEEYQGVPFIEAVQILGQRVGIEVEKPLYS EQKSASPHQALYDMHEDAAKFYHAILMTTTMGEEARNYLYQRGLTDEVLK HFWIGLAPPERNYLYQRLSDQYREEDLLDSGLFYLSDANQFVDTFHNRIM FPLTNDQGKVIAFSGRIWQKTDSQTSKYKNSRSTAIFNKSYELYHMDRAK RSSGKASEIYLMEGFMDVIAAYRAGIENAVASMGTALSREHVEHLKRLTK KLVLVYDGDKAGQAATLKALDEIGDMPVQIVSMPDNLDPDEYLQKNGPED LAYLLTKTRISPIEFYIHQYKPENSENLQAQIEFLEKIAPLIVQEKSIAA QNSYIHILADSLASFDYTQIEQIVNESRQVQRQNRMEGISRPTPITMPVT KQLSAIMRAEAHLLYRMMESPLVLNDYRLREDFAFATPEFQVLYDLLGQY GNLPPEVLAEQTEEVERAWYQVLAQDLPAEISPQELSEVEMTRNKALLNQ DNMRIKKKVQEASHVGDTDTALEELERLISQKRRME >SP_1711 dnaI, primosomal protein DnaI MESVGDVLKRQPSRFYYQDLVQKIMKDPDVAAFIQQESLTPKELNRSISK FNQYITERDKFLRGDTDYIAKGYKPILVKNHGYADVSYEETPELIAAEKE AAIKNRLKLINLPASLKKASLAQVDLDDLGRLPVFEKLLAFVEQYPAIRK GLYLYGDFGVGKSFMVAALAHDLSEKRGVSSTLLHYPSFVIDVKNAISDG NVKTLVDEIKLSEVLILDDIGAEQSTVWVRDEILQVILQYRMQENLPTFF TSNFNFEDLEKHFAKVKHGNDETWEARRVMERIRYLAEETRLEGVNRR >SP_0002 dnaN, DNA polymerase III, beta subunit MIHFSINKNLFLQALNTTKRAISSKNAIPILSTVKIDVTNEGITLIGSNG QISIENFISQKNEDAGLLITSLGSILLEASFFINVVSSLPDVTLDFKEIE QNQIVLTSGKSEITLKGKDSEQYPRIQEISASTPLILETKLLKKIINETA FAASTQESRPILTGVHFVLSQHKELKTVATDSHRLSQKKLTLEKNSDDFD VVIPSRSLREFSAVFTDDIETVEIFFANNQILFRSENISFYTRLLEGNYP DTDRLIPTDFNTTITFNVVNLRQSMERARLLSSATQNGTVKLEIKDGVVS AHVHSPEVGKVNEEIDTDQVTGEDLTISFNPTYLIDSLKALNSEKVTISF ISAVRPFTLVPADTDEDFMQLITPVRTN >SP_0865 dnaX, DNA polymerase III, gamma and tau subunits MYQALYRKYRSQNFSQLVGQEVVAKTLKQAVEQEKISHAYLFSGPRGTGK TSVAKIFAKAMNCPNQVGGEPCNNCYICQAVTDGSLEDVIEMDAASNNGV DEIREIRDKSTYAPSLARYKVYIIDEVHMLSTGAFNALLKTLEEPTQNVV FILATTELHKIPATILSRVQRFEFKSIKTQDIKEHIHYILEKENISSEPE AVEIIARRAEGGMRDALSILDQALSLTQGNELTTAISEEITGTISLSALD DYVAALSQQDVPKALSCLNLLFDNGKSMTRFVTDLLHYLRDLLIVQTGGA NTHHSSVFVENLALPQKNLFEMIRLATVSLADIKSSLQPKIYAEMMTVRL AEIKSEPALSGAVENEIATLRQEVARLKQELSNVGAVPKQVAPAPSRPAT GKTVYRVDRNKVQSILQEAVENPDLARQNLIRLQNAWGEVIESLGGPDKA LLVGSQPVAANEHHAILAFESNFNAGQTMKRDNLNTMFGNILSQAAGFSP EILAISMEEWKEVRAAFSAKAKSSQTEKEVEESLIPEGFEFLADKVKVEE D >SP_1845 exoA, exodeoxyribonuclease MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAK GPTKKHVEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFP EIGAPSTMDLEGRIITLEFDAFFVTQVYTPNAGDGLKRLEERQVWDAKYA EYLAELDKEKPVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNL LATGFTDTFRHVHGDVPERYTWWAQRSKTSKINNTGWRIDYWLTSNRIAD KVTKSDMIDSGARQDHTPIVLEIDL >SP_0970 fpg, formamidopyrimidine-DNA glycosylase MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQII ESMGRRGKYLLFYLTDKVLISHLRMEGKYFYYPDQGPERKHAHVFFHFED GGTLVYEDVRKFGTMELLVPDLLDVYFISKKLGPEPSEQDFDLQVFQSAL AKSKKPIKSHLLDQTLVAGLGNIYVDEVLWRAQVHPARPSQTLTAEEATA IHDQTIAVLGQAVEKGGSTIRTYTNAFGEDGSMQDFHQVYDKTGQECVRC GTIIEKIQLGGRGTHFCPNCQRRD >SP_1219 gyrA, DNA gyrase, A subunit MQDKNLVNVNLTKEMKASFIDYAMSVIVARALPDVRDGLKPVHRRILYGM NELGVTPDKPHKKSARITGDVMGKYHPHGDSSIYEAMVRMAQWWSYRYML VDGHGNFGSMDGDSAAAQRYTEARMSKIALEMLRDINKNTVDFVDNYDAN EREPLVLPARFPNLLVNGATGIAVGMATNIPPHNLGETIDAVKLVMDNPE VTTKDLMEVLPGPDFPTGALVMGKSGIHKAYETGKGSIVLRSRTEIETTK TGRERIVVTEFPYMVNKTKVHEHIVRLVQEKRIEGITAVRDESNREGVRF VIEVKRDASANVILNNLFKMTQMQTNFGFNMLAIQNGIPKILSLRQILDA YIEHQKEVVVRRTRFDKEKAEARAHILEGLLIALDHIDEVIRIIRASETD AEAQAELMSKFKLSERQSQAILDMRLRRLTGLERDKIQSEYDDLLALIAD LADILAKPERVSQIIKDELDEVKRKFSDKRRTELMIGQVLSLEDEDLIEE SDVLITLSNRGYIKRLDQDEFTAQKRGGRGVQGTGVKDDDFVRELVSTST HDHLLFFTNKGRVYRLKGYEIPEYGRTAKGLPVVNLLKLDEDESIQTVIN VESDRSDDAYLFFTTRHGIVKRTSVKEFANIRQNGLKALNLKDEDELINV LLAEGDMDIIIGTKFGYAVRFNQSAVRGMSRIATGVKGVNLREGDTVVGA SLITDQDEVLIITEKGYGKRTVATEYPTKGRGGKGMQTAKITEKNGLLAG LMTVQGDEDLMIITDTGVMIRTNLANISQTGRATMGVKVMRLDQDAQIVT FTTVAVAEKEEVGTENETEGEA >SP_0806 gyrB, DNA gyrase subunit B MTEEIKNLQAQDYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEI VDNSIDEALAGFASHIQVFIEPDDSITVVDDGRGIPVDIQEKTGRPAVET VFTVLHAGGKFGGGGYKVSGGLHGVGSSVVNALSTQLDVHVHKNGKIHYQ EYRRGHVVADLEIVGDTDKTGTTVHFTPDPKIFTETTIFDFDKLNKRIQE LAFLNRGLQISITDKRQGLEQTKHYHYEGGIASYVEYINENKDVIFDTPI YTDGEMDDITVEVAMQYTTGYHENVMSFANNIHTHEGGTHEQGFRTALTR VINDYARKNKLLKDNEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLG NSEVVKITNRLFSEAFSDFLMENPQIAKRIVEKGILAAKARVAAKRAREV TRKKSGLEISNLPGKLADCSSNNPAETELFIVEGDSAGGSAKSGRNREFQ AILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGFGAEFDVSKARYQK LVLMTDADVDGAHIRTLLLTLIYRYMKPILEAGYVYIAQPPIYGVKVGSE IKEYIQPGADQEIKLQEALARYSEGRTKPTIQRYKGLGEMDDHQLWETTM DPEHRLMARVSVDDAAEADKIFDMLMGDRVEPRREFIEENAVYSTLDV >SP_0173 hexB, DNA mismatch repair protein HexB MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEA GLKKVQITDNGHGIAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEAL PSIASVSVLTLLTAVDGASHGTKLVARGGEVEEVIPATSPVGTKVCVEDL FFNTPARLKYMKSQQAELSHIIDIVNRLGLAHPEISFSLISDGKEMTRTA GTGQLRQAIAGIYGLVSAKKMIEIENSDLDFEISGFVSLPELTRANRNYI SLFINGRYIKNFLLNRAILDGFGSKLMVGRFPLAVIHIHIDPYLADVNVH PTKQEVRISKEKELMTLVSEAIANSLKEQTLIPDALENLAKSTVRNREKV EQTILPLKENTLYYEKTEPSRPSQTEVADYQVELTDEGQDLTLFAKETLD RLTKPAKLHFAERKPANYDQLDHPELDLASIDKAYDKLEREEASSFPELE FFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIGNVDQSQQQLL VPYIFEFPADDALRLKERMPLLEEVGVFLAEYGENQFILREHPIWMAEEE IESGIYEMCDMLLLTKEVSIKKYRAELAIMMSCKRSIKANHRIDDHSARQ LLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRRIQENHTSLRELGKY >SP_0765 holA, DNA polymerase III, delta subunit MLAIEESQKLTLSNLPSLSLFTGTDQGQFEVMKSQMLKQIGYDSADLNFA YFDMKEVVYKDVELELVSLPFFADEKIVILDYFMDITTAKKRFLTDDELK SFEEYLDNPSPTTKLIIFAEGKLDSKRRLVKLLKRDAKAFDAVEVKEQEL RQYFQKWSQKQGLQFTNHSFENLLIKSGFQFSEIQKNLLFLQSYKANSVI EEEDIVNAIPKTLQDNIFDLTQFILTKKMDQARDLVRDLTLQGEDEIKLI AVMLGQFRTFTQVKILAESGQTESQIASSLGSYLGRNPNPYQIKFALRDS RGLSLSFLKQAISYLIETDYQIKTGLYEKGFLFEKALLQIASQVN >SP_0936 holB, DNA polymerase III, delta prime subunit MKQDQLKAWQPAQFDRFVRILEQDQLNHAYLFSGFFESLEMAQFLAKSLF CTDKVGVLPCEKCRSCKLIEQGEFPDVTLIKPVNQVIKTERIRELVGQFS QAGIESQQQVFIIEQADKMHPNAANSLLKVIEEPQSEVYIFFLTSDEEKM LPTIRSRTQIFHFKKQEEKLILLLEQMGLVKKKATLLAKFSQSRAEAEKL ANQASFWTLVDESERLLTWLVAKKKESYLQVAKLANLADDKEKQDQVLRI LEVLCGQDLLQVRVRVILQDLLEARKMWQANVSFQNAMEYLVLKEI >SP_1113 hup, DNA-binding protein HU MANKQDLIAKVAEATELTKKDSAAAVEAVFAAVADYLAAGEKVQLIGFGN FEVRERAERKGRNPQTGKEMTIAASKVPAFKAGKALKDAVK >SP_1117 ligA, DNA ligase, NAD-dependent MNKRMNELVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQV LADSPTHRVGGKVLDGFEKYSHQYPLYSLQDAFSCEELDAFDARVRKEVA HPTYICELKIDGLSISLTYEKGILVAGVTRGDGSIGENITENLKRVKDIP LTLPEELDITVRGECYMPRASFDQVNQARQENGEPEFANPRNAAAGTLRQ LDTAVVAKRNLATFLYQEASPSTRDSQEKGLKYLEQLGFVVNPKRILAEN IDEIWNFIQEVGQERENLPYDIDGVVIKVNDLASQEELGFTVKAPKWAVA YKFPAEEKEAQLLSVDWTVGRTGVVTPTANLTPVQLAGTTVSRATLHNVD YIAEKDIRKDDTVIVYKAGDIIPAVLRVVESKRVSEEKLDIPTNCPSCNS DLLHFEDEVALRCINPRCPAQIMEGLIHFASRDAMNITGLGPSIVEKLFA ANLVKDVADIYRLQEEDFLLLEGVKEKSAAKLYQAIQASKENSAEKLLFG LGIRHVGSKVSQLLLQYFHSIENLSQADSEEVASIESLGGVIAKSLQTYF ATEGSEILLRELKETGVNLDYKGQTVVADAALSGLTVVLTGKLERLKRSE AKSKLESLGAKVTGSISKKTDLVVVGADAGSKLQKAQELGIQVRDEAWLE SL >SP_0006 mfd, transcription-repair coupling factor MVTLLDLFSENDQIKKWHQNLTDKKRQLILGLSTSTKALAIASSLEKEDR IVLLTSTYGEAEGLVSDLISILGEELVYPFLVDDAPMVEFLMSSQEKIIS RVEALRFLTDSSKKGILVCNIAASRLILPSPNAFKDSIVKISVGEEYDQH AFIHQLKENGYRKVTQVQTQGEFSLRGDILDIFEISQLEPCRIEFFGDEI DGIRSFEVETQLSKENKTELTIFPASDMLLREKDYQRGQSALEKQISKTL SPILKSYLEEILSSFHQKQSHADSRKFLSLCYDKTWTVFDYIEKDTPIFF DDYQKLMNQYEVFERDLAQYFTEELQNSKAFSDMQYFSDIEQIYKKQSPV TFFSNLQKGLGNLKFDKIYQFNQYPMQEFFNQFSFLKEEIERYKKMDYTI ILQSSNSMGSKTLEDMLEEYQIKLDSRDKTNICKESVNLIEGNLRHGFHF VDEKILLITEHEIFQKKLKRRFRRQHVSNAERLKDYNELEKGDYVVHHIH GIGQYLGIETIEIKGIHRDYVSVQYQNGDQISIPVEQIHLLSKYISSDGK APKLNKLNDGHFKKAKQKVKNQVEDIADDLIKLYSERSQLKGFAFSADDD DQDAFDDAFPYVETDDQLRSIEEIKRDMQASQPMDRLLVGDVGFGKTEVA MRAAFKAVNDHKQVVILVPTTVLAQQHYTNFKERFQNFAVNIDVLSRFRS KKEQTATLEKLKNGQVDILIGTHRVLSKDVVFADLGLMIIDEEQRFGVKH KETLKELKKQVDVLTLTATPIPRTLHMSMLGIRDLSVIETPPTNRYPVQT YVLEKNDSVIRDAVLREMERGGQVYYLYNKVDTIVQKVSELQELIPEASI GYVHGRMSEVQLENTLLDFIEGQYDILVTTTIIETGVDIPNANTLFIENA DHMGLSTLYQLRGRVGRSNRIAYAYLMYRPEKSISEVSEKRLEAIKGFTE LGSGFKIAMRDLSIRGAGNLLGKSQSGFIDSVGFELYSQLLEEAIAKRNG NANANTRTKGNAELILQIDAYLPDTYISDQRHKIEIYKKIRQIDNRVNYE ELQEELIDRFGEYPDVVAYLLEIGLVKSYLDKVFVQRVERKDNKITIQFE KVTQRLFLAQDYFKALSVTNLKAGIAENKGLMELVFDVQNKKDYEILEGL LIFGESLLEIKESKEENSI >SP_1168 mutX, mutator MutT protein MPQLATICYIDNGKELLMLHRNKKPNDVHEGKWIGVGGKLERGETPQECA AREILEETGLKAKPVLKGVITFPEFTPDLDWYTYVFKVTEFEGDLIDCNE GTLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQV DFYE >SP_1228 mutY, A/G-specific adenine glycosylase MWPEEKVISFREKLLAWYDENKRDLPWRRSKNPYHIWVSEIMLQQTRVDT VIPYYERFLDWFPTVESLATAPEESLLKAWEGLGYYSRVRNMQAAAQQIM TDFGGQFPNTYEGISSLKGIGPYTAGAISSIAFNLPEPAVDGNVMRVLAR LFEVNHDIGIPSNRKIFQAMMEILINPDRPGDFNQALMDLGSDIESPVNP RPEESPVKDFSAAYQNGTMDRYPIKSPKKKPVPIYLKALVVKNSQGQFLL EKNESEKLLAGFWHFPFIEVDNFSQEEQFDLFHQVAEESVNFGPSPEESF QQDYDLDVDWLDVCFDTVQHVFSHRKWHVQIVAGQVSDFHDFSDREVRWL SPEEFKNYPLAKPQQKIWQVYAQANLDSSQD >SP_1279 nth, endonuclease III MVLSKKRARKVLEEIIALFPDAKPSLDFTNHFELLVAVMLSAQTTDAAVN KATPGLFVAFPTPQAMSVATESEIASHISRLGLYRNKAKFLKKCAQQLLD DFDGQVPQTREELESLAGVGRKTANVVMSVGFGIPAFAVDTHVERICKHH DIVKKSATPLEVEKRVMDILPPEQWLAAHQAMIYFGRAICHPKNPECDQY PQLYDFSNL >SP_1463 ogt, methylated-DNA--protein-cysteineS-methyltransferase MQKKYVKILYSSPIGILSLVADDHYLYGIWVQEQKHFERGLGDETIEEVV SHPILDPVIACLDDYFKGKPQDLSNLLLAPIGTNFEKRVWDYLQGIPYGQ TVTYGQIAQDLQVASAQAIGGAVGRNPWSILVPCHRVLGAGKRLTGYAAG VEKKAWLLEHEGVDFKDRSNRRRSTC >SP_0855 parC, topoisomerase IV, subunit A MSNIQNMSLEDIMGERFGRYSKYIIQDRALPDIRDGLKPVQRRILYSMNK DSNTFDKSYRKSAKSVGNIMGNFHPHGDSSIYDAMVRMSQNWKNREILVE MHGNNGSMDGDPPAAMRYTEARLSEIAGYLLQDIEKKTVPFAWNFDDTEK EPTVLPAAFPNLLVNGSTGISAGYATDIPPHNLAEVIDAAVYMIDHPTAK IDKLMEFLPGPDFPTGAIIQGRDEIKKAYETGKGRVVVRSKTEIEKLKGG KEQIVIIEIPYEINKANLVKKIDDVRVNNKVAGIAEVRDESDRDGLRIAI ELKKDANTELVLNYLFKYTDLQINYNFNMVAIDNFTPRQVGIVPILSSYI AHRREVILARSRFDKEKAEKRLHIVEGLIRVISILDEVIALIRASENKAD AKENLKVSYDFTEEQAEAIVTLQLYRLTNTDVVVLQEEEAELREKIAMLA AIIGDERTMYNLMKKELREVKKKFATPRLSSLEDTAKAIEIDTASLIAEE DTYVSVTKAGYIKRTSPRSFAASTLEEIGKRDDDRLIFVQSAKTTQHLLM FTSLGNVIYRPIHELADIRWKDIGEHLSQTITNFETNEEILYVEVLDQFD DATTYFAVTRLGQIKRVERKEFTPWRTYRSKSVKYAKLKDDTDQIVAVAP IKLDDVVLVSQNGYALRFNIEEVPVVGAKAAGVKAMNLKEDDVLQSGFIC NTSSFYLLTQRGSLKRVSIEEILATSRAKRGLQVLRELKNKPHRVFLAGA VAEQGFVGDFFSTEVDVNDQTLLVQSNKGTIYESRLQDLNLSERTSNGSF ISDTISDEEVFDAYLQEVVTEDK >SP_0852 parE, topoisomerase IV, subunit B MSKKEININNYNDDAIQVLEGLDAVRKRPGMYIGSTDGAGLHHLVWEIVD NAVDEALSGFGDRIDVTINKDGSLTVQDHGRGMPTGMHAMGIPTVEVIFT ILHAGGKFGQGGYKTSGGLHGVGSSVVNALSSWLEVEITRDGAVYKQRFE NGGKPVTTLKKIGTAPKSKTGTKVTFMPDATIFSTTDFKYNTISERLNES AFLLKNVTLSLTDKRTNEAIEFHYENGVQDFVSYLNEDKEILTPVLYFEG EDNGFQVEVALQYNDGFSDNILSFVNNVRTKDGGTHETGLKSAITKVMND YARKTGLLKEKDKNLEGSDYREGLAAVLSILVPEEHLQFEGQTKDKLGSP LARPVVDGIVADKLTFFLMENGELASNLIRKAIKARDAREAARKARDESR NGKKNKKDKGLLSGKLTPAQSKNPAKNELYLVEGDSAGGSAKQGRDRKFQ AILPLRGKVVNTAKAKMADILKNEEINTMIYTIGAGVGADFSIEDANYDK IIIMTDADTDGAHIQTLLLTFFYRYMRPLVEAGHVYIALPPLYKMSKGKG KKEEVAYAWTDGELEELRKQFGKGATLQRYKGLGEMNADQLWETTMNPET RTLIRVTIEDLARAERRVNVLMGDKVEPRRKWIEDNVKFTLEETTVF >SP_1087 pcrA, ATP-dependent DNA helicase PcrA MNALLNGMNDRQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKLV NPWNILAITFTNKAAREMKERAYSLNPATQDCLIATFHSMCVRILRRDAD HIGYNRNFTIVDPGEQRTLMKRILKQLNLDPKKWNERTILGTISNAKNDL IDDVAYAAQAGDMYTQIVAQCYTAYQKELRQSESVDFDDLIMLTLRLFDQ NPDVLTYYQQKFQYIHVDEYQDTNHAQYQLVKLLASRFKNICVVGDADQS IYGWRGADMQNILDFEKDYPKAKVVLLEENYRSTKTILQAANEVIKNNKN RRPKNLWTQNADGEQIVYYRADDELDEAVFVARTIDELSRSQNFLHKDFA VLYRTNAQSRTIEEALLKSNIPYTMVGGTKFYSRKEIRDIIAYLNLIANL SDNISFERIINEPKRGIGLGTVEKIRDFANLQNMSMLDASANIMLSGIKG KAAQSIWDFANMMLDLREQLDHLSITELVESVLEKTGYVDILNSQATLES KARVENIEEFLSVTKNFDDTTDVTEEETGLDKLSRFLNDLALIADTDSGS QETSEVTLMTLHAAKGLEFPVVFLIGMEENVFPLSRATEDSDELEEERRL AYVGITRAEKILYLTNANSRLLFGRTNYNRPTRFINEISSDLLEYQGLAR PANTSFKASYSSGSISFGQGMSLAQALQDRKRGAAPKSIQSSGLPFGQFT AGAKPASSEANWSIGDIALHKKWGEGTVLEVSGSGARQELKINFPEVGLK KLLASVAPIEKKI >SP_0032 polA, DNA polymerase I MDKKKLLLIDGSSVAFRAFFALYQQLDRFKNVAGLHTNAIYGFQLMLSHL LERVEPSHILVAFDAGKTTFRTEMYADYKGGRAKTPDEFREQFPFIRELL DHMGIRHYDLAQYEADDIIGTLDKLAEQDGFDITIVSGDKDLIQLTDEHT VVEISKKGVAEFEAFTPDYLMEEMGLTPAQFIDLKALMGDKSDNIPGVTK VGEKTGIKLLLEHGSLEGIYENIDGMKTSKMKENLINDKEQAFLSKTLAT IDTKAPIAIGLEDLVYSGPDVENLGKFYDEMGFKQLKQALNVSSADVSES LDFTIVDQISQDMLSEESIFHFELFGENYHTDNLVGFVWSCGDKLYATDK LELLQDPIFKDFLEKTSLRVYDFKKVKVLLQRFGVDLQAPAFDIRLAKYL LSTVEDNEIATIASLYGQTYLVDDETFYGKGVKKAIPEREKFLEHLACKL AVLVETEPILLEKLSENGQLELLYDMEQPLAFVLAKMEIAGIMVKKETLL EMQAENELVIEKLTQEIYELAGEEFNVNSPKQLGVLLFEKLGLPLEYTKK TKTGYSTAVDVLERLAPIAPIVKKILDYRQIAKIQSTYVIGLQDWILADG KIHTRYVQDLTQTGRLSSVDPNLQNIPARLEQGRLIRKAFVPEWEDSVLL SSDYSQIELRVLAHISKDEHLIKAFQEGADIHTSTAMRVFGIERPDDVTA NDRRNAKAVNFGVVYGISDFGLSNNLGISRKEAKAYIDTYFERFPGIKNY MDEVVREARDKGYVETLFKRRRELPDINSRNFNIRGFAERTAINSPIQGS AADILKIAMIQLDKALVAGGYQTKMLLQVHDEIVLEVPKSELVEMKKLVK QTMEEAIQLSVPLIADENEGATWYEAK >SP_1736 priA, primosomal protein N' MALAKIIVDVPLMQTDQPYSYRIPEEFEGMLEVGMRVHVPFGKGNRLIQG IVLGLKSQSDGEEMEQDLKDIAEVLDFSPVLTPEQLWLAEELRKSVFSYK ISILKAMLPGFLNSSYDKILYPLEGLSQEERVRLFGSEDSLAFSSLDLAK QAEMMRLTRKGLLGLEYQAVDQKKVKTQSWYEVDHAQLEGVEISTRAKKK LELRDYLLSHPESASLASLLESYSREQVNFFVDQGAVTIVQKEVQRSAAY FEGIEASRPLELNPEQRQARDAVVSSIGSSQPPFLLQGITGSGKTEVYLQ IIQGALDKGKTAILLVPEISLTPQMTERFIARFGDKVAILHSGLSNGEKY DEWRKVERGDAQVVVGARSAIFAPLKNLGVMIIDEEHEAAYKQDSNPRYH AREVAILRAQYNQATLVLGSATPSLESRARAGKGVYQHLRLTQRANPLAT IPEVQVIDFRDYIGQNETSNFTPPLLEAIQDRLVKKEQVVLMLNRRGYSS FVMCRECGTVDTCPNCDISLTLHMDTKTMNCHYCGFSKDIPQVCPNCKSR SIRYYGTGTQKAYDELAELFPQARILRMDVDTTRKKGSHQALLDQFGRGE ADILLGTQMIAKGLDFPNVTLVGVLNADTALNLPDFRSSERTFQLLTQVA GRSGRAEKAGQVLIQSYNPQHYAIRFAKDQDYEGFYAYEMGIRRQLGYPP YYFTIGITLSHKKEEEVFKRAYEVMNILRSGLSETSPILGPTPKPIARTH NLYHYQILIKYRLEDELGSTLNQVLALTQERENSELRLSIDHEPQQFL >SP_1088 radC, DNA repair protein RadC MYSISFQEDSLLPRERLAKEGVEALSNQELLAILLRTGTRQASVFEIAQK VLNNLSSLTDLKKMTLQELQSLSGIGRVKAIELQAMIELGHRIHKHETLE MESILSSQKLAKKMQQELGDKKQEHLVALYLNTQNQIIHQQTIFIGSVTR SIAEPREILHYAIKHMATSLILVHNHPSGAVAPSQNDDHVTKLVKEACEL MGIVLLDHLIVSHSNYFSYREKTDLI >SP_1940 recA, recA protein MAKKPKKLEEISKKFGAEREKALNDALKLIEKDFGKGSIMRLGERAEQKV QVMSSGSLALDIALGSGGYPKGRIIEIYGPESSGKTTVALHAVAQAQKEG GIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGA VDLVVVDSVAALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKT IAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRGNTQIKGTGDQ KETNVGKETKIKVVKNKVAPPFKEAVVEIMYGEGISKTGELLKIASDLDI IKKAGAWYSYKDEKIGQGSENAKKYLAEHPEIFDEIDKQVRSKFGLIDGE EVSEQDTENKKDEPKKEEAVNEEVPLDLGDELEIEIEE >SP_2227 recF, DNA replication and repair protein RecF MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTR SHRTRTDKNLIHFDEEQLHLSGLVQKKTGSIPLEIELTQKGRVTKVNHLK QARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDL TNYNHILKQRNTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKL ESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKIALEKSRSRDL FKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESIT TESPILLLDDVMSELDNTRQLKLLETISQSIQTFITTTSLDHLQNLPENL SIFTIQDGKAAVNGN >SP_1697 recG, ATP-dependent DNA helicase RecG MNLHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLE LEDGEKAVLSGQVVTPASVQYYGFKRNRLRFSLKQGEVVFAVNFFNQPYL ADKIELGATLAVFGKWDRAKASLTGMKVLAQVEDDLQPVYRLAQGISQAS LVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKYLAEY KQALRRIKFEELFYFQMQLQMLKSENRVQGSGLVLNWSQEKVTAVKVSLP FALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTA GYQAALMVPTEILAEQHFESLQNLFPNLKLALLTGSLKAAEKREVLETIA KGEADLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREKGDNPD VLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIKHEQLPQVL TWLEGEIQKGSQVYVISPLIEESEALDLKNAIALSEELTTHFAGKAEVAL LHGRMKSDEKDQIMQDFKERKTDILVSTTVIEVGVNVPNATVMIIMDADR FGLSQLHQLRGRVGRGDKQSYAVLVANPKTDSGKDRMRIMTETTNGFVLA EEDLKMRGSGEIFGTRQSGLPEFQVADIIEDFPILEEARKVASYISSIEA WQEDPEWRMIALHLEKKEHLD >SP_0611 recJ, single-stranded-DNA-specific exonuclease RecJ MITPTYEWQFALQVEDADFTKIAKKAGLGPEVARLLFERGIQNQESLKKF LEPSLEDLHDAYLLHDMDKAVERIRQAIEEGENILVYGDYDADGMTSASI VKESLEQLGAECRVYLPNRFTDGYGPNASVYKYFIEQEGISLIVTVDNGV AGHEAIALAQSMGVDVIVTDHHSMPETLPDAYAIVHPEHPDADYPFKYLA GCGVAFKLACALLEEVQVELLDLVAIGTIADMVSLTDENRILVQYGLEML GHTQRIGLQEMLDMAGIAANEVTEETVGFQIAPRLNALGRLDDPNPAIDL LTGFDDEEAHEIALMIHQKNEERKEIVQSIYEEAKTMVDPEKKVQVLAKE GWNPGVLGIVAGRLLEELGQTVIVLNIEDGRAKGSARSVEAVDIFEALDP HRDLFIAFGGHAGAAGMTLEVEQLSDLSQVLEDYVREKGADAGGKNKLNL DEELDLEALSLETVKSFERLAPFGMDNQKPIFYIKNFQVESARTMGAGNA HLKLKISKGEASFEVVAFGQGRWATEFSQTKNLELAVKLSVNQWNGQTAL QLMMVDARVEGVQLFNIRGKNAVLPEGVPVLDFPGELPNLAASEAVVVKN IPEDITQLKTIFQEQHFSAVYFKNDIDKAYYLTGYGTRDQFAKLYKTIYQ FPEFDIRYKLKDLAAYLNIQQILLVKMIQVFEELGFVTIKDGVMTVNKEA PKREIGESQIYQNLKQTVKDQEMMALGTVQEIYDFLMEKE >SP_1202 recN, DNA repair protein RecN MLLEISIKNFAIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNMMLGARA TTDVIRHGAPKAEIEGLFSVENSRLLQEIFDEQGLELGDEIIIRREILQN GRSISRVNGQMVNLSVLRAIGQHLVDIHGQHDHEELMRPQLHIQMLDEFG DAAFWDLKETYQTSFDAYRKMRKQVLEVKKNQQEHKARIEMLEFQMAEIE AANLQAGEDLALNQERDKLLNHKNIADTLTNAYSMLDNEDFSSLANVRSA MNDMESVEEYDPEYREISSYLSETYYVLEDISKRLEAIIEDLDFDGNRLM QVENRLDLLHTITRKYGGTVDDVLLYFAKITEEYNLLTGNNLSSEDMEAE LKKLEVNLVNLAGQLASARHNLAQQLEAEIKQELQDLYMEKAQFQVRFSK GKFSREGNKMVEFYISTNPGEDFKPLVKVASGGELSRLMLAIKSAFSRKE GKTSIVFDEVDTGVSGRVAQAIAQKIHKIGQHGQVLAISHLPQVIAIADY QFFIEKISNDHSTVSTVRLLTVEERVEEVAKMLAGDDVTEAALTQARELL RNREK >SP_1672 recR, recombination protein RecR MLYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSADDVNEFAKNLLSA KRELTYCSICGRLTDDDPCSICTDPTRDQTTILVLEDSRDVAAMENIQEY HGLYHVLHGLISPMNGISPDDINLKSLMTRLMDSEVSEVIVATNATADGE ATSMYLSRLLKPAGIKVTRLARGLAVGADIEYADEVTLLRAIENRTEL >SP_1152 rexA, exonuclease RexA MKLIPFLSEEEIQKLQEAEANSSKEQKKTAEQIEAIYTSAQNILVSASAG SGKTFVMAERILDQLARGVEISQLFISTFTVKAATELKERLEKKISKKIQ ETDDVDLKQHLGRQLADLPNAAIGTMDSFTQKFLGKHGYLLDIAPNFRIL QNQSEQLILENEVFHEVFEAHYQGKQKETFSHLLKNFAGRGKDERGLRQQ VYKIYDFLQSTSNPQKWLSESFLKGFEKADFTSEKEKLTEQIKQALWDLE SFFRYHLDNDAKEFAKAAYLENVQLILDEIGSLNQESDSQAYQAVLARVV AISKEKNGRALTNASRKADLKPLADAYNEERKTQFAKLGQLSDQIAILDY QERYHGDTWKLAKTFQSFMSDFVEAYRQRKRQENAFEFADISHYTIEILE NFPQVRESYQERFHEVMVDEYQDTNHIQERMLELLSNGHNRFMVGDIKQS IYRFRQADPQIFNEKFQRYAQNPQEGRLIILKENFRSSSEVLSATNDVFE RLMDQEVGEINYDNKHQLVFANTKLTPNPDNKAAFLLYDKDDTGEEEESQ TETKLTGEMRLVIKEILKLHQEKGVAFKEIALLTSSRSRNDQILLALSEY GIPVKTDGEQNNYLQSLEVQVMLDTLRVIHNPLQDYALVALMKSPMFGFD EDELARLSLQKAEDKVHENLYEKLVNAQKMASSQKGLIHTALAEKLKQFM DILASWRLYAKTHSLYDLIWKIYNDRFYYDYVGALPNGPARQANLYALAL RADQFEKSNFKGLSRFIRMIDQVLEAQHDLASVAVAPPKDAVELMTIHKS KGLEFPYVFILNMDQDFNKQDSMSEVILSRQNGLGVKYIAKMETGAVEDH YPKTIKLSIPSLTYRQNEEELQLASYSEQMRLLYVAMTRAEKKLYLVGKG SREKLESKEYPAAKNGKLNSNTRLQARNFQDWLWAISKVFTKDKLNFSYR FIGEDQLTREAIGELETKSPLQDSSQADNRQSDTIKEALEMLKEVEVYNT LHRAAIELPSVQTPSQIKKFYEPVMDMEGVEIAGQGQSVGKKISFDLPDF STKEKVTGAEIGSATHELMQRIDLSQQLTLASLTETLKQVQTSQAVRDKI NLDKILAFFDTVLGQEILANTDHLYREQPFSMLKRDQKSQEDFVVRGILD GYLLYENKIVLFDYKTDRYDEPSQLVDRYRGQLALYEEALSRAYSIENIE KYLILLGKDEVQVVKV >SP_1151 rexB, exonuclease RexB MKLLYTDIRTSLTEILTREAEELVAAGKRVFYIAPNSLSFEKERAVLEYL SQQASFSITVTRFAQMARYLVLNDLPAKTTLDDIGLGLAFYKCLAELDPK DLRVYGAIKQDPQLIQQLIELYHEMTKSQMSFLDLENLTDEDKRADLLLI FEKVTAYLNQGQLAQESQLSHLIEAIENDKVSSDFNQIALVIDGFTRFSA EEERVVDLLHGKGVEIVIGAYASKKAYTSPFSEGNLYQASVKFLHHLASK YQTPAQDCSQTHEKMDSFDKASRLLESSYDFSELALDVDEKDRENLQIWS CLTQKEELELVARSIRQKLHENSDLSYKHFRILLGDVASYQLSLKTIFDQ YQIPFYLGRSEAMAHHPLTQFVESILALKRYRFRQEDLINLLRTDLYTDL SQSDIDAFEQYIRYLGINGLPAFQQTFTKSHHGKFNLERLNVLRLRILAP LETLFASRKQKAEKLLQKWSVFLKEGAVTKQLQDLTTTLEAVEQERQAEV WKAFCHVLEQFATVFAGSQVSLEDFLALLHSGMSLSQYRTIPATVDTVLV QSYDLIAPLTADFVYAIGLTQDNLPKISQNTSLLTDEERQNLNQATEEGV QLLIASSENLKKNRYTMLSLVNSARKQLFLSAPSLFNESESKESAYLQEL IHFGFRRREKRMNHKGLSKEDMGSYHSLLSSLVAYHQQGEMSDTEQDLTF VKVLSRVIGKKLDQQGLENPAIPTSPSSKTLAKDTLQALYPAKQEFYLST SGLTEFYRNEYSYFLRYVLGLQEELRLHPDARSHGNFLHRIFERALQLPN EDSFDQRLEQAIQETSQEREFEAIYQESLEAQFTKEVLLDVARTTGHILR HNPAIETIKEEANFGGKDQAFIQLDNGRSVFVRGKVDRIDRLKANGAIGV VDYKSSLTQFQFPHFFNGLNSQLPTYLAALKREGEQNFFGAMYLEMAEPV QSLMAVKSLAGAVVEASKSMKYQGLFLEKESSYLGEFYNKNKANQLTDEE FQLLLDYNAYLYKKAAEKILAGRFAINPYTENGRSIAPYVQQHQAITGFE ANYHLGQARFLEKLDLADGKRLVGEKLKQAWLEKIREELNR >SP_1156 rnhB, ribonuclease HII MATIKEIKEFLVTVKELESPIFLELEKDNRSGVQKEISKRKRAIQAELDE NLRLESMLSYEKELYKQGLTLIAGIDEVGRGPLAGPVVAAAVILSKNCKI KGLNDSKKIPKKKHLEIFQAVQDQALSIGIGIIDNQVIDQVNIYEATKLA MQEAISQLSPQPEHLLIDAMKLDLPISQTSIIKGDANSLSIAAASIVAKV TRDELLKEYDQQFPGYDFATNAGYGTAKHLEGLTKLGVTPIHRTSFEPVK SLVLGKKES >SP_0403 rnhC, ribonuclease HIII MASITLTPSEKDIQAFLEHYQTSLAPSKNPYIRYFLKLPQATVSIYTSGK ILLQGEGAEKYASFFGYQAVEQTSGQNLPLIGTDEVGNGSYFGGLAVVAA FVTPDQHDFLRKLGVGDSKTLTDQKIRQITPILKEKIQHQALLLSPSKYN EVIGDRYNAVSVKVALHNQAIYLLLQKGVQPEKIVIDAFTSAKNYDKYLA QEANRFSNPISLEEKAEGKYLSVAVSSVIARDLFLENLENLGRELGYQLP SGAGTASDKVASQILQAYGMQGLSFCAKLHFKNTEKAKKRLER >SP_0179 ruvA, Holliday junction DNA helicase RuvA MYAYLKGIITKITAKYIVLETNGIGYILHVANPYAYSGQVNQEAQIYVHQ VVREDAHLLYGFRSEDEKKLFLSLISVSGIGPVSALAIIAADDNAGLVQA IETKNITYLTKFPKIGKKTAQQMVLDLEGKVVVAGDDLPAKVAVQASAEN QELEEAMEAMLALGYKATELKKIKKFFEGTTDTAENYIKSALKMLVK >SP_0259 ruvB, Holliday junction DNA helicase RuvB MSRILDNEMMGDEELVERTLRPQYLREYIGQDKVKDQLQIFIEAAKMRDE ALDHVLLFGPPGLGKTTMAFVIANELGVNLKQTSGPVIEKAGDLVAILND LEPGDVLFIDEIHRLPMSVEEVLYSAMEDFYIDIMIGAGEGSRSVHLELP PFTLIGATTRAGMLSNPLRARFGITGHMEYYAHADLTEIVERTADIFEME ITHEAASELALRSRGTPRIANRLLKRVRDFAQIMGNGVIDDVITDKALTM LDVDHEGLDYVDQKILRTMIEMYSGGPVGLGTLSVNIAEERETVEDMYEP YLIQKGFIMRTRSGRVATAKAYEHLGYEYSEK >SP_1336 spn5252IMP, type II DNA modification methyltransferase Spn5252IP MIWVLDLFAGIGGFRMGMEAQGHECLGFCEIDKFARKSYKSIFQTEGEIE FHDIRDVSDDEFKKLRGKVDVICGGFPCQAFSIAGRRLGFEDTRGTLFFE IARAAKQIQPRFLFLENVKGLLNHDKGRTFTTILTTLDELGFDVEWQVLN SKDFGVPKNRERVFIIGHSRKKGTRLLFPFRREGQATNSETLKALGNLNP SRSGMSGKVYYSEGLAPTLVRGKGEGFKVAIPCMTPDRLDKRQNGRRFKE NQEPMFTLNTQDRYGIVVVGDLPTSFKETGRVYGSEGLSPTLTTMQGGDK IPKILIPEPIQFLKVREATKKGYAQAEIGDSINLERPSSQYRRGRVGKGI ANTLTTSGQMGVVVASYEGEDKQVYQVAGVLIDGQFYRLRIRRITPKECF RLHGFPD >SP_1540 ssb, single-strand binding protein MINNVVLVGRMTRDAELRYTPSNVAVATFTLAVNRTFKSQNGEREADFIN VVMWRQQAENLANWAKKGSLIGVTGRIQTRSYDNQQGQRVYVTEVVAENF QMLESRSVREGHTGGAYSAPTANYSAPTNSVPDFSRNENPFGATNPLDIS DDDLPF >SP_1908 ssbB, single-strand DNA-binding protein MYNKVILIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVN MVLWGRLAETLASYATKGSLISVDGELRTRRFEKNGQMNYVTEVLVTGFQ LLESRAQRAMRENNAGQDLADLVLEEEELPF >SP_0180 tag, DNA-3-methyladenine glycosylase I MTNPLYIAYHDEEWGQPLHDDQVLFELLCMETYQAGLSWETVLNKRQAFR EVFHSYQIHSVAEMTDTELEAMLENPAIIRNRAKLFATRANAQAFLQLQA EYGSFDAYLWSFVEGKTVVNDVPDYRQAPAKTPLSEKLAKDLKKRGFKFT GPVAVLSFLQAAGLVDDHENDCEWKGLK >SP_1263 topA, DNA topoisomerase I MATATKKKKSTVKKNLVIVESPAKAKTIEKYLGRNYKVLASVGHIRDLKK SSMSVDIENNYEPQYINIRGKGPLINDLKKEAKKANKVFLASDPDREGEA ISWHLAHILNLDENDANRVVFNEITKDAVKNAFKEPRKIDMDLVDAQQAR RILDRLVGYSISPILWKKVKKGLSAGRVQSIALKLIIDRENEINAFQPEE YWTVDAVFKKGTKQFHASFYGVDGKKMKLTSNNEVKEVLSRLTSKDFSVD QVDKKERKRNAPLPYTTSSMQMDAANKINFRTRKTMMVAQQLYEGINIGS GVQGLITYMRTDSTRISPVAQNEAASFITDRFGSKYSKHGSKVKNASGAQ DAHEAIRPSSVFNTPESIAKYLDKDQLKLYTLIWNRFVASQMTAAVFDTM AVKLSQKGVQFAANGSQVKFDGYLAIYNDSDKNKMLPDMVVGDVVKQVNS KPEQHFTQPPARYSEATLIKTLEENGVGRPSTYAPTIETIQKRYYVRLAA KRFEPTELGEIVNKLIVEYFPDIVNVTFTAEMEGKLDDVEVGKEQWRRVI DAFYKPFSKEVAKAEEEMEKIQIKDEPAGFDCEVCGSPMVIKLGRFGKFY ACSNFPDCRHTQAIVKEIGVECPSCHQGQIIERKTKRNRLFYGCNRYPEC EFTSWDKPVGRDCPKCGNFLMEKKVRGGGKQVVCSKGDYEEEKMALCQL >SP_1169 ung, uracil-DNA glycosylase MEHSSWHALIKAQLPEGYFGKINQFMEQVYSQGIIYPPKEKVFQALLTTL LEEVKVVILGQDPYHGPGQAQGLSFSVPDSIPAPPSLQNILKELSDDIGV KKSHDLTAWAEQGVLLLNACLTVPAGQANGHAGQIWEPFTDAVIQVVNHL DRPVVFVLWGAYARKKKALVTNPHHLIIESAHPSPLSVYRGFWGSKPFSK ANAFLKETGQEPIDWLR >SP_0186 uvrA, excinuclease ABC, subunit A MQDKIVIHGARAHNLKNIDVEIPRDKLVVVTGLSGSGKSSLAFDTLYAEG QRRYVESLSAYARQFLGNMEKPDVDAIDGLSPAISIDQKTTSKNPRSTVG TTTEINDYLRLLYARVGTPYCINGHGAINASSVEQIVDKVLELPERQRLQ ILAPVIRKKKGQHKSVIEKVQKDGYVRVRVDGEVYDVTEVPELSKSKQHN IDVVVDRIVIKEGIRSRLFDSIEAALRIAEGYVIIDTMDDSELLFSEHYA CPVCGFTVPELEPRLFSFNAPFGSCSECDGLGIKLEVDTDLVVPDASKTL REGALAPWNPISSNYYPNMLEQAMKVFGVAMDKPFEDLSEEDKNLILYGS DGKEFHFHYENEFGGVRDIDIPFEGVINNIKRRYHETNSDYTRTQMRLYM NELTCGTCQGYRLNDQALSVRVGGQQGPHIGEISDLSIADHLDLVSQLTL SENEAIIARPILKEIKDRLTFLNNVGLNYLTLSRSAGTLSGGESQRIRLA TQIGSNLSGVLYILDEPSIGLHQRDNDRLIASLKKMRDLGNTLIVVEHDE DTMREADYLIDVGPGAGVFGGEIVAAGTPKQVARNSKSITGQYLSGKRVI PVPEERRVGNGRFIEVIGARENNLQNVTARFPLGKFIAVTGVSGSGKSTL INSILKKAIAQKLNRNSDKPGKFKTITGIEHVDRLIDIDQSPIGRTPRSN PATYTGVFDDIRDLFAQTNEAKIRGYKKGRFSFNVKGGRCEACSGDGIIK IEMHFLPDVYVACEVCHGTRYNSETLEVHYKEKNISQVLDMTVNDAVEFF QHIPKIQRKLQTIKDVGLGYVTLGQPATTLSGGEAQRMKLASELHKRSTG KSFYILDEPTTGLHTEDIARLLKVLARFVDDGNTVLVIEHNLDVIKTADH IIDLGPEGGVGGGTIIVTGTPEEVAANEASYTGHYLKGKLHHE >SP_1238 uvrB, excinuclease ABC, subunit B MINHITDNQFKLVSKYQPSGDQPQAIEQLVDNIEGGEKAQILMGATGTGK TYTMSQVISKVNKPTLVIAHNKTLAGQLYGEFKEFFPENAVEYFVSYYDY YQPEAYVPSSDTYIEKDSSVNDEIDKLRHSATSALLERNDVIVVASVSCI YGLGSPKEYADSVVSLRPGLEISRDKLLNDLVDIQFERNDIDFQRGRFRV RGDVVEIFPASRDEHAFRVEFFGDEIDRIREVEALTGQVLGEVDHLAIFP ATHFVTNDDHMEVAIAKIQAELEEQLAVFEKEGKLLEAQRLKQRTEYDIE MLREMGYTNGVENYSRHMDGRSEGEPPYTLLDFFPDDFLIMIDESHMTIG QIKGMYNGDRSRKEMLVNYGFRLPSALDNRPLRREEFESHVHQIVYVSAT PGDYENEQTETVIEQIIRPTGLLDPEVEVRPTMGQIDDLLGEINARVEKN ERTFITTLTKKMAEDLTDYFKEMGIKVKYMHSDIKTLERTEIIRDLRLGV FDVLVGINLLREGIDVPEVSLVAILDADKEGFLRNERGLIQTIGRAARNS EGHVIMYADTVTQSMQRAIDETARRRKIQMAYNEEHGIVPQTIKKEIRDL IAVTKAVAKEEDKEVDINSLNKQERKELVKKLEKQMQEAVEVLDFELAAQ IRDMMLEVKALD >SP_0618 uvrC, excinuclease ABC, subunit C MNNLIKSKLELLPTSPGCYIHKDKNGTIIYVGKAKNLRNRVRSYFRGSHD TKTEALVSEIVDFEFIVTESNIEALLLEINLIKENKPKYNIMLKDDKSYP FIKITNERYPRLIITRQVKKDGGLYFGPYPDVGAANEIKRLLDRIFPFRK CTNPPSKVCFYYHIGQCMAHTICKKDEAYFKSMAQEVSDFLKGQDDKIID DLKSKMAVAAQSMEFERAAEYRDLIQAIGTLRTKQRVMAKDLQNRDVFGY YVDKGWMCVQVFFVRQGKLIERDVNLFPYFNDPDEDFLTYVGQFYQEKSH LVPNEVLIPQDIDEEAVKALVDSKILKPQRGEKKQLVNLAIKNARVSLEQ KFNLLEKSVEKTQGAIENLGRLLQIPTPVRIESFDNSNIMGTSPVSAMVV FVNGKPSKKDYRKYKIKTVVGPDDYASMREVIRRRYGRVQREALTPPDLI VIDGGQGQVNIAKQVIQEELGLDIPIAGLQKNDKHQTHELLFGDPLEVVD LSRNSQEFFLLQRIQDEVHRFAITFHRQLRSKNSFSSQLDGIDGLGPKRK QNLMKHFKSLTKIKEASVDEIVEVGVPRVVAEAVQRKLNPQGEALPQVAE ERVDYQTEGNHNEP >SP_1207 xseA, exodeoxyribonuclease VII, large subunit MEKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPTHQYFSLKDD HAVIQATIWSGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEP DGVGALAIQFEQLKKKLTEEGLFQERFKQALPQFSKRIGVVTSRSGAVIR DIITTVSRRFPGVDILLYPTKVQGEGAAEEIARNIARANQRDDLDLLIIG RGGGSIEDLWAFNEEIVVRAIFESRLPVISSVGHETDVTLADFVADRRAA TPTAAAELATPVTKLDVLAHLQNQEKRMVTAVRNVLSKKQEALKKCSQSV IFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSP VTKIQRYQDRLGQLDKLLGSQMALVYDAKVAEAKRLSEALLMLDTSRIVA RGYAIVKKEESVVDSVESLKKKDQVTLLMRDGQVELEVKDVKTKEI >SP_1206 xseB, exodeoxyribonuclease VII, small subunit MSKQKKFEENLAELETIVQSLENGEIALEDAITAFQKGMVLSKELQATLD KAEKTLVKVMQEDGTESDFE