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# Streptococcus mutans UA159, UA159

>SMU.767 putative transposase, ISSmu1
MVTEFSLDILLKIIKLARSTYYYHLKQLDKSNKDHAIKAEIQAIFTEHKG
NYGYRRMTLELRNRGFLVNHKKVQRLMKVLGLEARIRRKRKYSSYQGEVG
KKADNLIQRQFEASKPMEKCYTDVTEFAIPASGQKLYLSPVLDGFNSEII
AYNLSTSPNLIQVKAMLEQAFTEKHYTNTILHSDQGWQYQHDFYHQFLEN
KGIQPSMSRKGNSPDNGMMESFFGILKSEMFYGYEKTFKSLKQLEQAIVD
YIDYYNNKRIKVKLKGLSPVQYRTKSFT
>SMU.766 conserved hypothetical protein
MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIV
KKGKNRYYSPELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYK
KNRYTIVEKTRGRPPKMGRKPKKKSEEMTELEQLQKELEYLRAENAVLKK
LRELRLREEKEQEEKRKLSEDW
>gid:147536  SMU.1024c  putative transposase fragment
MFFDEINVYEKTFKSLDKLEKAITNYIFYYNNKRIKTKLKGLSPVQYRTK
SFQ
>gid:147545  SMU.1034c  putative integrase/recombinase; XerC-like
MRRELLLEKIDELKELMPWYVLEYYQSKLTVPYSFTTLYEYLKEYRRFFE
WLIDSGVSNANKLADIPLETLEHLSKKDMESFILYLRERTLLNTKNKRQG
VSQTTINRTLSALSSLYKYLTEEVENADGEPYFYRNVMKKVSTKKKKETL
AARAENIKQKLFLGNETMEFLEYVDCEYEHKLSKRALSSFRKNKERDLAI
IALLLASGVRLSEAVNLDLKDVNLNMMIIEVTRKGGKHDSVNVAGFAKPY
LENYITIRRGRYKAKKTDLAFFLSEYRGVPNRMDASSIEKMVAKYSQDFK
IRVTPHKLRHTLATRLYDATKSQVLVSHQLGHASTQVTDLYTHIVNDEQK
NALDKL
>gid:147710  SMU.1209c  hypothetical protein
MNVDFGVASYLFGKSADFLFDTFFAKLGFKNDKDRKKLKKIVNEFKVSIN
AQHKENPDFENIMSFWKENHIFEELLKIRYSLNSDFNSYDELKKHLEKQK
MPVELNIELSEQLMDELEQELSRAVQEVSSLSQADVATLKNNIEPLLSNS
LSTPSQPVVKDKNKLLNNKKNGREQLSLEESWNKVSTETAENESSSVDKD
TSQKKRESHLASSIFFGDKFDLAFPDVGSDFKVYSKEAVIENRLNEFFRD
FNYTSSSPVRKVRGGEWEDISTFKFGSERSLLKTITNGTYELIIDKVVAF
NSPAYWNKFILIQVRPDNLAEITGDDYNSKNSKEAFYAFSDNRYYDYKVG
EYRKYLVDGILHSLNGEIENRIRYLEKDNFLIVPRYHPLAIEYKYYDKVK
IFLEELLVAKNSDEENEIHIKISRFSRSMYRTLADDRENRFVYDYY
>gid:146695  SMU.123  DNA polymerase III, alpha subunit
MSELFKKLMDQIEMPLEMKNSRVFSSADIVEVKVYPESRIWDFRFSFETI
LPIDFYQELRSRLVTSFETADIKAVFDIEVENAEFSNELLQAYYQEAFKQ
PTCNSASFKSSFSHLTVSYTDGKVLISAPQFVNNDHFRKNHLPNLEKQFE
AFGFGKLSFDIVSNQKMTEEIKHHFESSRQQQIQKASQETLEIQKSLEAS
IPPEEIPKPVSNFKERIKDRQAAFEKAEITPMAEIETEENRITFEGLVFD
VERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLRV
RGNIENNPFTKALTMNVQNVKTIVHKERKDLMPQGEKRVEFHAHTNMSTM
DALPTVEQLVAKAAQFGHPAVAITDHGNVQSFPHGYHAGKKNGIKVLFGL
EANLVEDRVPIVYNEVDMDMNEATYVVFDVETTGLSAINNDLIQIAASKM
HKGNIVEQFDEFIDPGHPLSQFTTDLTGITDQHVKGAKPISQVLQEFQSF
CQDTVLVAHNATFDVGFMNANYERHDLPKITQPVIDTLEFARNLYPEYKR
HGLGPLTKRFQVSLEHHHMANYDAEATGRLLFIFLKEAKEKHGVNNLLDL
NTKIVDDNSYKKARVKHATIYVLNQKGLKNLFKLVSLSNVTYFAGVARIP
RTILDQYRDGLLLGTACSDGEVFDTVLSKGVEDAVEVAKYYDFIEVMPPA
LYEPLLARELIKDEAGIQQIIKDLIEVGRRLDKPVLATGDVHYLEPEDEI
YREIIVRSLGQGAMINRPIGRGENAQPAPLPKAHFRTTNEMLDEFAFLGE
DLARDIVIKNPNEMVERFEDVEVVKTDLYTPFIENSEEKVAEMTYEKAFE
IYGNPLPDIIDLRIEKELTSILGNGFAVIYLASQMLVNRSNERGYLVGSR
GSVGSSFVATMIGITEVNPMPPHYICPNPDCKHSEFITDGSVGSGYDLPD
KICSECGTPYKKDGQDIPFETFLGFDGDKVPDIDLNFSGDDQPSAHLDVR
DIFGEEYAFRAGTVGTVADRTAYGFVKGYERDYGKFYRDAEVDRLAQGSA
GVKRTTGQHPGGIVVIPNYMDVYDFTPVQYPADDLTAEWQTTHFNFHDID
ENVLKLDVLGHDDPTMIRKLQDLSGIDPKTIPADDPEVMKLFSGTEVLGV
TEEEIGTPTGMLGIPEFGTNFVRGMVDETHPTTFAELLQLSGLSHGTDVW
LGNAQDLIKQGIATLSTVIGCRDDIMVYLMHAGLEPKMAFTIMERVRKGA
WLKISEEERNGYISAMRENNVPDWYIESCGKIKYMFPKAHAAAYVLMALR
VAYFKVHHPIYYYCAYFSIRAKAFELKTMSAGLDAVKARMADISQKRKIN
QASNVEIDLFTTLEIVNEMLERGFKFGQLDLYRSDATEFIIDGDTLIPPF
VALEGLGENVAKQIVKARNEGEFLSKTELRKRGGLSSTLVEKMSDMGILG
SMPEDNQLSLFDDFF
>gid:147738  SMU.1238c  conserved hypothetical protein
MTSLEEITKAIMADSQNKVFTEKNIEPLFAAPKTARINIVGQAPGIKAQE
SRLYWNDKSGDRLREWMGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPP
RKGFAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTVAHYK
KYLPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQSS
>gid:147754  SMU.1257c  conserved hypothetical protein
MSADKYLDYSKEHLDSILSDLFGNKQPSSKKDAIFMAGSPGAGKSEVAHL
LADSYKNMIVLDTDDFRCLFPDYDGSNSSNFQKACSWLTEQAFQYLTEKG
YSFIYDTTFAVPSTEKKIKRVLKNGYRPVIFYVYQEPKIAWQFTKDRERV
EGRKVPKETFINAFLHARENVEKVKVRHPETLVHLIIKDYQNTIEEVHFD
MENINLILPNNNTRETLEEELYE
>gid:147756  SMU.1259  conserved hypothetical protein; possible restriction endonuclease
MSLSIGNPPYQDTALGNNITYAPPIYHEFMEEAYIIANKVSLITPARFLF
NAGSTPKLWNEKMLSDEHLKIVFYEANSVNVFPNTGIAGRVVVTYVDTKL
STKRTFVL
>gid:147806  SMU.1313c  putative ATP-dependent DNA helicase; DNA polymerase III, epsilon subunit (3'-5' exonuclease)
MTEKKTRKYAVVDLEATGASHSASIIQVGIVIIENEQIIQTYTTDVNPHK
PLSKAIIRLTGITDAQLQQAPDFSEVAADIYHLIDDCVFVAHNVKFDANL
LAEHLFLEGFELLTPRVDTVELAQVFYPTFEKYSLGNLTELLKIDLSDAH
TAIADAKATAELFLKLKQKMTDLPKLTLERILQFSDSLLYESKLPIEEAF
AAASNHLSSDYQEVAGIVLKKEEPFLKERQLSQDFATNIALLDLEERTQQ
LKFAQVIEAKFEDSRASFIEAQSGIGKTYGYLLPLLNQHGEEQIIVSVST
KILQDQIMANEAQALREAFHINSHSLKSPQNYLKLDSFYKTLMRKDDNRL
LNRYKMQLLVWLLETRTGDLDEIKQKQRYAAYFDEIRHDGTLSKQSLFYH
LDFWQKSYQRAKSSRLLITNHAYLLTRIEDDQAFVENQILVIDEAQRLFL
TLEQFSRRQINMTETLQTLNQLLENSQNILEKRLLESIQFELNHLLYLFN
KEKRQLFKKETIERLRQHLSELSLTELADLQALFEEPYSDFWFEEDFFWD
HRTVLLKSARLDFTDFTQFLPATKKTYLVSATLQISPKVSLANLLGFEQF
TFDSISGEKSHQQAIWVDKTMPRVNDISDSEYETLLTKRLLQLAQLKQPM
LVLFNSKKTMFAVSDLLDEAKLTHLTQEKNGSPFNIKRRFDRGEADILLG
TGGFWEGVDFVEQDRLIEVITRLPFDNPEDLFVKKLNRQLRQEGKNPFYD
YTLPTSILRLRQAIGRTRRNNRQFSAIVILDSRVVNKNYGKIIYQALASH
FSVSSQHFQKILVEVTHFLI
>gid:147819  SMU.1329c  putative transposase
MQLIRQAMNKQLLPDTIVIMDSFPLVLCQSVRNCRARIFEGLADIGYNAS
KHLWFYGFKVHMLVTLSGSILNDVVTSASVPDIKVVDDLLEGCQQSVILA
DLGYLSQELKDSLERRGYRLWTPRRQNMEGASQHNNWRLLAMRRTVETRF
SELCTSV
>gid:147820  SMU.1330c  putative transposase
MEATNKLIKDIKRQAFGFRNFKNFKTKILIALNITKERTNLILSRA
>gid:147821  SMU.1331c  putative transposase
MAFIAQDFETRKIVTVLENNKQSTIKNYFYNYPRMVRERVKVVTVDMSAS
YIPIIKQLFPNAQIVLDRFHIIQHLSRAMMSTRVAIMKSFDIKSLPYRAM
KNHWRILHKDSRKLSDKAFYSRTFRQTLTPREIVDKTLAFSDELRYYDNL
YQLLLFHFQEKRATQFFELIEDHLNLVNHRF
>gid:147822  SMU.1332c  putative transposase
MSGKYDFQKASSIPILDSQRMPTVLKLKKRRFQCKACRRVSVSETPLVQK
NCQISKAIWAKITQLHTEKLTNSAIAKRLHISVSVVQ
>gid:147839  SMU.1351  putative transposase fragment
MMPREVFDKAFKIAAVKLILEEGQSVKMVSSTLEFIQKSFISLDSRRRKI
WRKSVLRTGERSSSCPKRKPSSRQIENEALKEIIKTIFYEHKERYRRGIR
VNRKRIARLFHELCLYAKGSLL
>gid:147840  SMU.1352  putative transposase
MLKEACYKYKYYNRRRSSLRRPNLINPCFQTKGKNEIWLGDFTYIPTKAG
TLYLSVSVFIDIYRRKIVGWAMGNHMQGQLVTDAFNQAYHRERPKKGLIV
HTDQGSQ
>gid:147841  SMU.1353  putative transposase
MTQKKCQSSMSRKGNPYDNALMASFYKTLKRELVNDAHFASIEQAQLEIF
K
>gid:147842  SMU.1354c  putative transposase fragment
MTENKLNREFQAEKPLEKLVTDITYLYFGSCKRYLSSIMDLYNHNREIVA
YTISDCQDIDFVLDTLNQLELPRGAFYTVIRALFTP
>gid:147843  SMU.1355c  putative transposase fregment
MEDYKNVYPVSIILDCFGVKRSTFYRWKAKGEKPEKRDKIVEKIEQLCMK
NHFIYGYRTITRLLKKIHGLIVNRKKVYRIMKEKGWLCRARPKKVQI
>gid:147850  SMU.1363c  putative transposase
MFILLVSLPPRISVSSFMGYLKGKSALMMFDKHANLKYKFGNRHFWAEGY
YVSTVGLNEATIKKYIQEQEKHDIALDKLSVKEYEDPFRDNGK
>gid:147856  SMU.1370c  putative transposase, IS150-like
MRILGHHSPIRKKTYHSCTQREITEKARHVHYNVLARNFKAERPLQKLTT
DVSYVYYNYGRMLLSVIKDCYDNSILDYTLSDFNDNKLVFDNIDLVFNDF
WDSTKVCILPSDQGFQYTNQQYLRKLDQYGVTISHSGKGNGYDNAACENF
FSHLKSESLRPFSPKDKRTLIRQIREYINWYNYHRPQEKLKGMTPMEFRE
SYLTK
>gid:147857  SMU.1372c  hypothetical protein
MKQGRKTTFEGRIEIVTFTMVHNKNYHAAVEKYGGSYQQVYSWVRKFKKD
GINGLLDRRGKGLESKLISVVMVAIVLRPV
>gid:147858  SMU.1373c  hypothetical protein
MSKRSSKSVAEKLEIVLLYLERERSISTLTRHSGVDHQTIKDWVRKYKGS
DIEGLKESRI
>gid:147863  SMU.1379  conserved hypothetical protein
MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIV
KKGKNRYYSPELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYK
KNRYTIVEKTRGRPPKMGRKPKKKSEEMTELEQLQKELEYLRAENAVLKK
LRELRLREEKEQEEKRKLSEDW
>gid:147871  SMU.1388  putative RNA helicase
MKTQFPSVWQDKLSQKHFSAFTTIQEAAFDPIKNGKSLLGISPTGSGKTL
AYLWPSLLTLTPKKAQQLLILAPNTELAGQIFEVAKEWAQPLNLTAQLFL
SGSSQKRQIERLKKGPEIIIGTPGRVFDLVKLKKIKMMNVNTIVLDEFDD
LLGKSQIHFVKNIVKRVPRDHQMIYMSATNSIDRTFLADDTLEIDLSKQT
VDTISHYYITVAKRERGELLRKFSNIPNFRGLVFFNRLSDLGANEERLQF
SGASAVSLASDVNIKFRKVILEKFKNHELSLLLATDLVARGIDIELLETV
INFDLPRDKDAYNHRAGRTGRMGKNGIVVTFISHPEELKKLKKFAHVSEV
YLKNQILHKK
>gid:147886  SMU.1404c  conserved hypothetical protein
MGWRTVVVNTHSKLSYKNNHLIFKDAYQTEMIHLSEIDILLLETTDIVLS
TMLIKRLVDENILVIFCDDKRLPTAMLMPYYARHDSSLQLSHQISWTEEV
KCDVWTTIIAQKILNQSCYLGECFYFEKSQSIMDLYHDLEPFDPSNREGH
SARIYFNTLFGNVFSREQDNDINAGLDYGYTLLLSMFAREVVVSGCMTQF
GLKHANQFNQFNFASDIMEPFRPIVDRIVYENRNNSFIKIKRELFSMFSD
TYLYNNKEMYLTNIVSDYTKKVIKALNNDGKGVPEFRI
>gid:147889  SMU.1407c  putative transposase, ISSmu1
MVTEFSLDILLKIIKLARSTYYYHLKQLDKSNKDHAIKAEIQAIFTEHKG
NYGYRRMTLELRNRGFLVNHKKVQRLMKVLGLEARIRRKRKYSSYQGEVG
KKADNLIQRQFEASKPMEKCYTDVTEFAIPASGQKLYLSPVLDGFNSEII
AYNLSTSPNLIQVKAMLEQAFTEKHYTNTILHSDQGWQYQHDFYHQFLEN
KGIQPSMSRKGNSPDNGMMESFFGILKSEMFYGYEKTFKSLKQLEQAIVD
YIDYYNNKRIKVKLKGLSPVQYRTKSFT
>gid:147890  SMU.1408c  conserved hypothetical protein
MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIV
KKGKNRYYSPELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYK
KNRYTIVEKTRGRPPKMGRKPKKKSEEMTELEQLQKELEYLRAENAVLKK
LRELRLREEKEQEEKRKLSEDW
>gid:147940  SMU.1465c  conserved hypothetical protein; replication protein DnaD-like
MSFLQHYKSGNLVLPSALLFHYKDIFSNADDFLVWQFFYFQNTTKMEDIA
TSQIATAIGKTVPEVNRSVSNLISQELLDMKTIELDGESEVLFDATLALK
KLDDLLTAADETTVSSSKGISNALKDLVEDFERELGRMLSPFELEDLQKT
VSDDKTDPDLVRSALREAVFNGKTNWNYIQAILRNWRHEGISTLRQVEER
RKEREQANPANVTVSDDFLSAMNLWSDSDAR
>gid:146717  SMU.149  putative transposase
MELFYHIVFALKYHRQIIYGRYKTSIGRIIWDLCERKGVTIHEANACSDH
IHMLVSIASKFSVSSFMGYLKGKSSLMIFDKHANLKYKYGNRSFGVEAIM
>gid:148074  SMU.1616c  conserved hypothetical protein
MDYISYIRSKVGHDKVILTFAGGILADKDGRVLLQLRGDKKTWAIPGGAM
ELGESTLDTAKREFFEETGIKVEAVCFLNVYSHFEEVYPNGDEVQTIVMI
YEFKALNDFDISDFHNEETLRLRFFSEEEIAKLESVSDKHRLMLAEYFDD
SFALGH
>gid:148091  SMU.1634c  conserved hypothetical protein
MDFEEKTIKRQPIFNGQIFKVAVDNVQLPNQLGTAKRELIFHRGAVAVLA
VTPENKLVIVKQYRKAIEKISYEIPAGKLEIGENGTEKEAALRELEEETA
YTGDLKLIYEFYTAIGFCNEKIKLYLATNLEKVDNPRPQDDDEVIELFEL
TYDECMELVRSGDIEDAKTLIALQYFALHFKDK
>gid:148166  SMU.1714c  hypothetical protein
MITFISKFLASKSLTLNSQKSYLYDLQQFAEIIGEEVTPNKLKLYEQSLA
DLKVSAKKRKISAVNQFLFFLYENEVLDRFYKIKNKEKLPLLTPAYQEVD
LSVLYRKIGDSKGQLIALLIVELGLSPSEIIQLKWENIALEFQVLTIVNE
KVMRILEIPQLLLPYLEGEHKAVYLFDNKGEAYSRQWLFQKLNYYLASVD
LSQMTAQKLREQYIIKEKNKGTAILDLTRKLGLKSPVTLEKYFKN
>gid:148183  SMU.1733c  putative SNF helicase
MSKLIPGRVRNEGIHFYEKDLVSILEEKDNSLLVQVADYKIQFSLEDDLV
SCPCSMFQKRGYCSHLAAVEHYLKNHPKGKNLADNLLADEQKLEERKEKT
SLGSLFLDGLNMNEDDDVKYRLSAQGSQSPFSSDFWWTLKINRLPDERSY
VIRDIKAFLLLVKKESYYQIGKNYYEPLSLLQFDTASQELIEFLWRILPD
SNQVDTDFIMPNHARNLTFTSGFFEEGVTLLNQLYDFSFEGEHQDYHTIN
FAELDSSNQFYHFKIVVHRQSIELIIKEKTATFFFDNHYLLYHNTFYHLN
NKQRKLVTAIRSLPLEKDLAKHIYFDFEDQAKLAASLLDFKTLGEVEAPA
SFDIRDFDVVFTFSLLANREILLELTFDYGQIKVSNVKGKEALPFASNFK
KEKKIANLLKQYGFSQGFRSYHPPLLDEELYNFFTETLSHFERFGKVLLS
PSIEALRYLEKPQIDIKTEQGLLDISFDFSTIFENDIDNALTALFENHSY
FVSQSGKLIIFDEETQKVSQALQNLRAQKPHNGHLQINKFAAYQVSETLQ
NMDNVHFSEDFSQLVKDLRHPEDFSLPEFEVNASLREYQVRGIKWMSMLD
KYGFGGILADDMGLGKTLQTLSFLTSRLDKDSKVLILSPSSLIYNWQDEC
QKFTPQLDVAVSYGLKAVRDEIIAENHQITITSYASFRQDFNLYNQLNFD
YLILDEAQVMKNTQTKIAQSLRAFDVKNCFALSGTPIENKLLEIWSIFQI
VLPGLLPTKKEFLKMEPQSVARYISPFIMRRRKEDVLPELPDLIEINYHN
ELIDSQKAIYLAQLRQMQDGIRHSSDSEINRQKIEILSGITRLRQICDTP
KLFMNYDDDSGKLASLRELLLQIKENGHRALIFSQFRDMLDLAEKEIEAL
GLTSYKMTGSTPANERQEMTHAFNNGSKDTFLISLKAGGVGLNLTGADTV
VLIDLWWNPAIEMQAISRAHRIGQKENVEVYRMITRGTIEEKILELQESK
KNLVTTVLDGNESRASMSIEEIKEILGISS
>gid:146742  SMU.175  hypothetical protein
MTEILNFLITVCADRENWKIKHGLSDSVLLIFFARFTGAEYW
>gid:148214  SMU.1753c  conserved hypothetical protein
MMVLVTYDVNTETVAGRKRLRHVAKLCVDYGQRVQHSVFECSVTPAEFVE
IKNELSTIIDQESDSIRFYLLGKNWQNRVETMGRDDSYDPDVGILLL
>gid:148215  SMU.1754c  conserved hypothetical protein
MLTYECQSALEAVGLDSYVGFYHTDRPGRASLALDLVEEFRSYIVDRFVF
SLINKGQLSKKHFDIKENGSVILTEKGRAIFIEAWQKRKHTEVEHPFTKE
KVKLMLLPYVQAQLLSKAIRGELESYPPFLI
>gid:148216  SMU.1755c  conserved hypothetical protein
MAILLRRQQYRLADNDLSLAYAKRFILAKISNARKYLLRFRRDHRAKINQ
QLFEEVNTELTFALEMVATARDKDTLLGIEGQAANHYFRAFNDLVLTDK
>gid:148217  SMU.1757c  conserved hypothetical protein
MKKLLNTLYLTQDNFYLTRERDNIVIKQEGAVVHRFPYRIIYGIVCFSYL
GASPSLIELCAKNQINLSFHTPQGRFCGRFVGPANGNPFTTSAV
>gid:148218  SMU.1758c  conserved hypothetical protein
MLSGIQHFQFCKRQWGLIHIEQQWAENEATAHGQILHQKADNPYIREKRK
DIITSRAMHVSSKTLGLYGILDVVEFHKDKNGVTLKGKRGKWLPRIVEYK
RGKPKRDTRDIVQLVAQTICLEETFGCPIETGCLYYHSVNQKKVIEITEA
LRQEVFDLAGQMHYYYDNKIIDKAEYFKNCPLCSLVDICKPRLSKKSRNV
ANYIKRHVMSEESL
>gid:146743  SMU.176  hypothetical protein
MPVSKKRYMLSSAYATALGICYGQVATDEKESEITAIPDLLDYLSVEEYL
L
>gid:148219  SMU.1760c  conserved hypothetical protein
MLEQKIDFMVTVEVREANANGDPLSVNMPRTDAKDYGLMSDVSIKRKIRN
RMQDMGQPIFVQARDRVDDCIYSLKQRLENKEFFDTVKEGSKKKKSVENF
VKQINAEWLDVRSFGQVFAFDGYSAANVRGPVSISWAKSLEKVVTQSMQI
TKSTNSELNSKTELESSTMGTKHFVDYGVYVIKGSINPNFAEKTGFSDAD
AEIIKEVLVSLFENDASSARPEGSMRVREVFWFTHSNKLGNVSSARVFDL
LEFDKEKQDKDSYEDYAIHLNQEELAEYEAKGLQVEIIEGL
>gid:148235  SMU.1776c  conserved hypothetical protein
MSTIAIRVDDELKEKATELYKELGLDMSTAVKLFLTQSVKTRSIPFEIKD
SSADDLLNKRLTDLIMENAETVKTIDLDNSD
>gid:148278  SMU.1812  putative transposase, ISSmu2
MRLIKNTTELIGIKDPNIIIFLVFETDTHIESQAKRNYPAPSCPHCQGKM
IKYDFQRPSKIPLLEQAGTPTLLRLKKRRFQCKGCKRVMVAETSIVEKNC
QISNLVRQKVAQRLTEKVSLTDIARRLRVSTSTVYRKLDQFTFKEHYDRL
PRVMSWDEVGFKKGELAFVAQNYETNELITILDNRRQTTIRNYFLKYPLK
VRQEVRFITMDMSGAYIPMARKLFPNAKIVLDRFHIIQHLGRAFLKTRIA
IMNQFDKKSLPYRALKNHWRLFQKDSRKLSLNSFYSKTFRQTLSPHEVVE
KTLDFSEELTDYYTLYQLLLFHFQEKRAEEFFELIEENMSKVNHYFQIIF
RTFLKHKQYIKNALETDYSNAKLEATNKLIKDIKRLGFGFRNFINFRKRV
FITLNIQKKEDLSGPL
>gid:148282  SMU.1816c  putative maturase-related protein
MKSVMPSIDERLRTCMRAIIWKQWKKKSKRLWGLLKLGVPRWIADKGSGW
GDHYQLVAPKSVLKRAISKSVLAKRGL
>gid:148283  SMU.1817c  putative maturase-related protein
MSLVHHIIQDGDTESFIRSYLYSGVVINGQRHKTLAGTPQRGNLSPLLSN
IMINELDKELENRDLHFV
>gid:148318  SMU.1855  hypothetical protein
MKKNYFWYGLLGLLALYLITIAFIPGFHIFFSNMLMLALFFMLIALSNRS
IFFFFLALGFLSIYLKDIFHFDYSTGPLFTGIIIIGVILNSFLKPHYSYS
YKGNHYFNMKQHANYIDNETDVFLKTLFSENTSYVTSQELNKIIIDTKFG
EQSVDLSQAQFMTDSPEIHIDVSFGETNLRIPNNWKIINKTHSPFASISF
SGFPSTNGDFINVTLTGTVAMGSLNIQY
>gid:148333  SMU.1875  putative exodeoxyribonuclease V, similar to conjugation transfer protein
MTYYFSGTIDRVIFENTSNFFKIILLEIDDTDSDFDDFEIIVTGTIADVI
EGENYTFWGELTQHPKYGQQLKVERYQRAKPSSAGLIKYFSSQHFKGIGK
KTAEKIIHLYGDDPIDNILEDPDKLESISGLSKANRENLVSKLRLNYGAE
QILAKLAEYGLNNKTAVQIFERYKEESLTVITENPYQLVEDIQGIGFKMA
DKLAEQVGINSDAPQRFRAALVHTLLETSIDKGDTYIEAKELLEKSLFIL
EEVRQVELDPSQIAQELTQLISEDKVQNIGTKIFDNTLFYAESGIHKHLT
RILDRPLEKEISSQDIQTEIKHIQAEFNINYDKAQKNAIQKAIQSKVFLL
TGGPGTGKTTVINGIIKAYANLHQIDLQKSDRPIILAAPTGRAARRMNEL
TGLPSATIHRHLGLNGDSEYQALDDFLDCDLIIIDEFSMVDTWLANQLFS
AIASNTQVIIVGDSDQLPSVGPGQILADLLKINRLPQVSLTKIFRQSEDS
TIVTLANQIRQGRLPTDFTAKKADRSYFEAQSTHIPQMIQKIVSSALKSG
IDAQEIQILAPMYRGQAGITHLNKLMQDLLNPLNNQLEFQFNDLHFRKGD
KVLHLINDAQINVFNGDIGYITDLIPAKYTESKQDEMILDFDGTEINYPR
NEWLKITLAYAMSIHKSQGSEFKVVILPVTRQSGRLLQRNLIYTAITRSK
SKLVMLGEIAAFDNAIKNEGTKRKTYLIERFKKDECSGHHNTEKNKQGVK
ESAAILKEDFILTERNILTIDPMIGLSQADIDLFFKK
>gid:148343  SMU.1888  hypothetical protein; possible transposase fragment
MKPTFKSIDQLKSAITDYIIYTLQTRSASPCPALALPVASFLVCFLIFIE
YYCSNKQIKTKLKGLSPV
>gid:148347  SMU.1893c  putative transposase, ISSmu1
MVTEFSLDILLKIIKLARSTYYYHLKQLDKSNKDHAIKAEIQAIFTEHKG
NYGYRRMTLELRNRGFLVNHKKVQRLMKVLGLEARIRRKRKYSSYQGEVG
KKADNLIQRQFEASKPMEKCYTDVTEFAIPASGQKLYLSPVLDGFNSEII
AYNLSTSPNLIQVKAMLEQAFTEKHYTNTILHSDQGWQYQHDFYHQFLEN
KGIQPSMSRKGNSPDNGMMESFFGILKSEMFYGYEKTFKSLKQLEQAIVD
YIDYYNNKRIKVKLKGLSPVQYRTKSFT
>gid:148348  SMU.1894c  conserved hypothetical protein
MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIV
KKGKNRYYSPELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYK
KNRYTIVEKTRGRPPKMGRKPKKKSEEMTELEQLQKELEYLRAENAVLKK
LRELRLREEKEQEEKRKLSEDW
>gid:146773  SMU.191c  putative integrase
MINMYIPQFNPRIRKDQKSGLFFFEIRDNEGKTVSYQSGFNTKREAENTA
LEIQQKLRQGYTLDRYTSLYDWFQTWYDLKIRPKKKLSQETKKNYQIYGE
TLKRLFGDKPIIDIKSSQYQRIMNVYGETVGYDYLSRINSVIRKIIKLAQ
SDKIVIDDFTSTVELFAGKDGQKVNEKYIHSVEDYHRLISYLENNLNYED
SVVNHVIYVIAKTGMRYGEIIGLTNNDTSLDEHYLHTYKRYNTSTWKWTN
AKNESSKRYIPIDDKIVAALSNMIKERERINSLLRIKNKEEFLFFHYGLE
HGIPSVATVNKALKKILKKLDIEPIITTKGLRHTYGSYLLHNNIDMGVVA
RILGHKDIQMLIQVYGHTLTEKIDKEFKEVEQIMNRI
>gid:148425  SMU.1979c  conserved hypothetical protein
MDFEKIEAAYNLLLDNCQRLETQLHTHLYDALIEQNACYLGAEGADDFIK
ENNKKLRQLNLSKEEWRRSFQFIFIKATQSQQLQSNHQFTPDSIGFIILY
LLEGLTNKSQLDIIEIGSGTGNLAETIVNNSSKSIDYMGIEVDDLLIDLS
ASIADVLDSSVHFVQEDAVRPQILKESDIIISDLPVGFYPNDKIAQRYQV
AAKLGHTYAHHLLMEQSLKYLKKEGLAIFLAPVDLLTSEQSPLLKKWLQN
NVTILAVISLPEAIFKQKSNIKSIFVLKKQSQQSLESFVYPLTDLQDPEV
LRRFMKNFKKWKEDNVF
>gid:146778  SMU.197c  hypothetical protein
MHYLKRFFCLGLPFLLLISFVQPITADSIASNGSSLNGNSQADIGPDNSQ
YQTPAQKEIQGVQAKSKQKEAKKEKKVADTLTADEDYQKASKADDRLQKY
YKKENPSEVEMQKAIKDYNTIEKFLHDKSNEKKYKDSTKWQSLSANFESY
NTKISAVKDGVKAITEAQKKYEKAMTSKDPADLAILTSYFYGEDGWFGVK
DIFPKAVNSLIQGIFFLGKMIYLLVVIILEAVFSTNFYAFLDKAVELSGN
AFNHIMDAYGVYIFMATGLLGVLEFARKGKIPLKLFQFFLIWLVALFLYQ
PSNFNTDVDHSEITASYNLSKVVKIVDVVSSELSGQAIKGLGLLDGQKQN
SQSSAPVSTADGFQALRKTIFKEMVLEPFYSLNFSADFIQNSTSDDLDTA
VNKLISTKGTSDNVKNFAESKDYKGQTTLNWSAIGVKFLVALAALAKAII
LGGALVILGLVSVVFKYLVLIIIAMSMLLFFVALLPKLDYVLGNTLKKIV
QYAFVGGLGLFGVTLFIWINSLIGVAADSFSGGVYYWSALLEGIIWFLIY
LFRGSIASLFSKGGMRLHDLTSAAQFRLNKFYRPSHFEADREGLKRQLER
SQVKEMLPVNQRQPSRFRTLLRASRAGTEQLYDRLRYGVGSNPQKRYIQQ
NRAERRRNFKQMLQDRKEALQDHAANLMTFAQPRAFIHDLAGDEDTPIQR
HVSERSQRQVERLSRKQVDEQAYMEDLRAMKRLKGQRSFKDMSAKQERRA
VKNFKQEVYLRKHGVIDMDTVRRDRINRHLDRVENRRERLRRTQLRQQEK
IKQSLFQT
>gid:148501  SMU.2056  putative ATPase
MIWRLPMPNNLALRMRPRDISEVIGQKHLVGQGKIISRMVTANRLSSMIL
YGPPGIGKTSIASAIAGTTKFAFRTFNATTDTKKRLQEIAEEAKFSGGLV
LLLDEIHRLDKTKQDFLLPLLENGQIIMIGATTENPFFSVTPAIRSRVQI
FELEPLSNEDIKKAMQAALTDTERGFDFEVKLDDDALDFIAQATNGDLRS
AYNSLDLAIMSTQPDDNGSRHITLDTVENSLQRSYITMDKDGDGHYDVLS
ALQKSIRGSDVNASLHYAARLIEAGDLPSLARRLTIIAYEDIGLANPDAQ
IHTVTALEAAQKIGFPEARILIANVVIDLALSPKSNSAYVAMDKAIADLH
KSGTIPIPRHLRDGHYAGSKELGNAQDYLYPHAYPEKWVKQQYLPDKLKG
ANYFTANETGKYERALGANKDKIDKLS
>gid:148522  SMU.2078c  conserved hypothetical protein
MRIIGLDVGSKTVGVAVSDPLGFTAQGLEIIPINEAKGEFGFDRLADLVK
DYKVEKFVVGLPKNMNNTSGPRVEASQAYGKKIKELFDLPVEYQDERLTT
VQAERMLVEQADVSRGKRKKVIDKLAAQLILQNYLDRMF
>gid:148534  SMU.2091c  DNA mismatch repair protein
MTKEKLSPGMQQYLDIKKDYPDAFLLFRMGDFYELFYDDAIKAAQILEIS
LTSRNKNADNPIPMAGVPYHSAQQYIDVLIDLGYKVAIAEQMEDPKKAVG
VVKREVVQVITPGTVVDSTKPDSANNFLVSLDTDGSQFGLSYMDLSTGEF
YATTLADLPAVRSEVLNLKTRELVIGFELSENEDQLFRKQMNLLLSFEKT
VYDDVHLLDDQLKAIELAAAGKLLQYVHNTQKRELSHLQKLVHYEIKDYL
QMAYATKSSLDLLENARSGKKHGSLYWLLDETKTAMGTRLLRTWIDRPLV
SSSLISKRQDIIQTFLDHFFERSDLSDSLKGVYDIERLASRVSFGKANPK
DLLQLGQTLSQVPVIKTILESFASSSLESLINQIDTLPELEALIRSAIDS
NAPITITEGGMIREGFDETLDKYRTVMREGTSWIADIETKERQKSGISTL
KIDYNKKDGYYFHVTNSNLSLVPDYFFRKATLKNSERFGTAELAKIEGEM
LEAREESANLEYDIFMRIRSQVESYIERLQNLAKSLATVDVLQSLAVVAE
NNHYVRPSFNHQQEISIENGRHAVVEKVMGSQEYIPNTINFDQKTSIQLI
TGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIFDAIFTRIGAADD
LISGQSTFMVEMMEANHAIKAATPNSLILFDELGRGTATYDGMALAQAII
EYIHNKVGAKTLFATHYHELTDLSTRLTSLVNVHVATLEKDGEVTFLHKI
ADGPADKSYGIHVAKIAGLPKDLLNRADHILVDLEKMSAAVSVNLKNETK
ESQPVEEQLSLFAIDNNYEELIKKLKQLDLTNLTPRESMNALFDLKELL
>gid:148561  SMU.2120c  putative 3-methyladenine DNA glycosylase
MLSKKFKQVMETDTIATAKALLGMQLCLDDKPLGRIVETEAYLGSKDSAC
HSANDRRTPKNEAMYLAAGHWYVYQIYGHQMLNLVTKPQNVAEAVLIRAL
ETADGHLLANGPGKLTKFAGIDKSFNGDSLQDSRLSLQEDLSPQRIEERS
RIGVTCTDEWKDALLCFYVRGNQHVSKIAKKSLLTDKETWKS
>gid:146801  SMU.221c  putative integrase
MYVQLKTGLRTGEIAGLTWDCVLWEQQAIKTYRRYDTVRRRWTKPKTEES
VRKVPIDSKVIKVLDDLHAIQKEYLDLYYIINDDNVIFLDLFYGIQSNNG
VNKRLRSILKELDIAPKNMSSTGLRHSYCSLLLAKGVDIWAVAKLMGHID
IKQITETYGHLVAEKAEEENNKVRNLLQHLN
>gid:146802  SMU.222c  hypothetical protein; possible integrase fragment
MAISYRQRGKKKLWDYRVFDSNKKVIASNSGFKTKKEAESEALYLEMKLK
NGTIIDRNITLYQL
>gid:146806  SMU.226c  putative transposase
MTEPFHQDDMVIRDSFPIPVCLPARNDKVRSFRDQATVAYNPPKKMCFYG
FKAHMLVTLSGFIVNYGVTPASVHDRQVAEDLLENTTFPVVLADLGYLSK
VLKQHLTRKDYRFWTPLRRNMVMVKAKQHNHWRLKAERRTIETRFSVLCS
EFDIERPLARSLKGLKLWLEQTIFAYNLGFFY
>gid:146610  SMU.31  hypothetical protein
MKQYVARLEKDFSLIEHGFKEEEQRALTDYKSNDGEYIKKLAFLAYQSDV
YQVRMYAVFLFGYLSKDKEILIFMRDEVSKDNNWRVQEVLAKAFDEFCKK
IEYKKALPIIDEWLKSSNLHTRRAATEGLRIWTNRPYFKENPNEAIRRIA
DLKEDVSEYVRKSVGNALRDISKKFPDLVKIELKNWKLESKEINQVYKLA
SKFIDA
>gid:146908  SMU.341  putative deoxyribonuclease
MHKRGQTAIIFHFQRGAVLKSAPLSHSVNHNILFSICYNDSMLQIFDTHT
HLNVEDFTGKEQEEINFAHELGVTKMNIVGFDQSTIKRALELAELYPELY
ATIGWHPTEAGSYMQEVEDMIVSHLHDPKVIALGEIGLDYHWMEDPKEVQ
IEVFKRQIQLSKDHDLPFVVHTRDALDDTYEIIKEAGVGPRGGIMHSYSG
SLEMAERFIDLGMMISFSGVVTFKKALDVQEAAQHLPLDKILVETDAPYL
APVPKRGRKNHTAYTRYVVDKIAELRGLTIEEVAQATYDNAMRLFRLKD
>gid:146909  SMU.342  conserved hypothetical protein
MKPKVCLRPCYLRQAVKKIEFMTEKIKIQEVLVVEGKDDTVNLRRFYDVD
TYETRGSAINDEDLERIEKLNNLRGVIVFTDPDYNGERIRKLIMTAVPTA
KHAFLNRGEAVPKSKTKGRSLGVEHASFEDLQKALSGVLGNYDDENHFDI
SKSDLMRFGLLMGADSRKRREYIGEKLRIGYSNGKQLLKRLELFGITKAE
VEEVMEKYQKR
>gid:146967  SMU.403  putative DNA-damage-inducible protein P
MLIFPLINDTSRKIIHIDMDAFFAAVEERDNPKLKGKPLVIGADPRQTGG
RGVVSTANYLAREFGIHSAMSSKEAYERCPQAIFIRGNHTKYRQIGLQVR
EIFRRYTDLVEPMSIDEAYLDVTENKLNIKSAVKIAKLIQRDIWEEFHLT
CSAGVSYNKFLAKLASDYDKPHGLTVILPQDAEGFLATLPIEKFYGVGKK
SVEKLHALHIFTGKDVQQVPEMTLIDLFGRFGFDLYRKARGISNSPVKND
RIRKSIGSERTYGKLLYNDEDIKLELSKTARRVADSLKKHGRKGKIVVIK
VRYSDFSTLTKRKTLDVPTQDFEVIERSAHRIFDHLTENNSGVRLLGVTV
TALEDSTREELSLTADDFKT
>gid:146999  SMU.436c  putative transposase, ISSmu1
MVTEFSLDILLKIIKLARSTYYYHLKQLDKSNKDHAIKAEIQAIFTEHKG
NYGYRRMTLELRNRGFLVNHKKVQRLMKVLGLEARIRRKRKYSSYQGEVG
KKADNLIQRQFEASKPMEKCYTDVTEFAIPASGQKLYLSPVLDGFNSEII
AYNLSTSPNLIQVKAMLEQAFTEKHYTNTILHSDQGWQYQHDFYHQFLEN
KGIQPSMSRKGNSPDNGMMESFFGILKSEMFYGYEKTFKSLKQLEQAIVD
YIDYYNNKRIKVKLKGLSPVQYRTKSFT
>gid:147019  SMU.458  putative ATP-dependent RNA helicase
MLFTDFKFKNYINNALANLHFEGPTEVQERLIPLILSGKDLVGESKTGSG
KTHTFLLPIFEKLEEDSLDVQAVITAPSRELARQIYEAAKQIAQFSEQNI
RLANYIGGTDKLRQVEKLKATQPQIMIGTPGRIYDLVKSGHLDIHKAHTF
VVDEADMTLDLGFLDTVDKIAASLPKDIQLLVFSATIPQKLQPFLKKYLN
HPIIEKIKTSTVIADTISNWLISTKGRDKNQQILEIVKSLKPYLAIIFAN
TKDRVDDLHAFLSANGFKTAKIHGGIPPRERKRIMNQVKQLDFEYIVATD
LAARGLDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLSGTAITLYQPSD
DSDIRELEKLGIVFVPKVLKNGEFQDTYDRDRRLNRKKTQEKLDLEMMGL
VKKKKKKIKPGYKKKIQWKVNEKRRKERRFVKRAQNRANRKAKKQRF
>gid:147032  SMU.472  conserved hypothetical protein; possible N6-adenine-specific DNA methylase
MKKTFNLVATAAAGIEAVVGKELRNLGLDCQVENGRVLFKGNIETIAKSN
LWLRSADRIKIVVGEFPARTFEELFQGVYALDWENYLPLGCQFPVAKAKS
VKSKLHNEPSIQGITKKAIVKKLQHYFHRPDSVPLPENGPEFKIEISLLK
DQARVMIDTTGPSLFKRGYRTEKGGAPIKENMAAAIILLSNWFPDKPFVD
PTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQ
ADYDIQLDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKI
NGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTNDTDFEQ
KFGRKADKKRKLYNGSLKVDLYQFYGQRVKRVLR
>gid:147062  SMU.505  putative adenine-specific DNA methylase
MMNNEYKYGGIFMTKPYYYKNKTILVHADTFQFLEKMKSESIDMIFADPP
YFLSNGGFSNSGGQVVSVDKGDWDKAASLEEKHEFNRRWIRLAKKVLKSN
GTIWISGSLHNIYSVGMALEQEGFKILNNITWQKTNPVPNLSCRYFTHST
ETILWARKNDKKSKHYYNYDLMKKINDGKQMKDVWTGSLTKKSEKWAGKH
PTQKPEYLLERIILASTKKGDYILDPFVGSGTTGVVAKKLGRRFIGIDSE
REYLRIARTRLERVDGQYC
>gid:147072  SMU.516  conserved hypothetical protein
MRIISGNYGGRPLKTLEGKTTRPTSDKVRGAIFNMIGPYFDGGRVLDLFA
GSGGLSIEAISRGMTGAVLVEKNRRAQAVIEANIRMTKEGNKFQLLKMDA
ARALTNLNEQFDLIFLDPPYAKEEIMKTIEELCQRKLLSEEVMVVCETDK
AVELPEEVAELGIWKQKIYGISKVTVYVR
>gid:147114  SMU.561c  putative hydrolase (MutT family)
MAFFSIIKSESDWLTIEGDNMTNHPTFGDKLENVDYKTRYGVYAVIPNKD
KTKIILVQAPNGSWFLPGGEIEAGENHLTALERELIEELGFTADIGHYYG
QADEYFYSSHRETYFYNPAYLYEVTQFTQVGNPLEDFNHLAWFSIEEAKS
KLKRGSHKWGIDCWQKDQEKN
>gid:147118  SMU.565c  putative transposase, ISSmu1
MVTEFSLDILLKIIKLARSTYYYHLKQLDKSNKDHAIKAEIQAIFTEHKG
NYGYRRMTLELRNRGFLVNHKKVQRLMKVLGLEARIRRKRKYSSYQGEVG
KKADNLIQRQFEASKPMEKCYTDVTEFAIPASGQKLYLSPVLDGFNSEII
AYNLSTSPNLIQVKAMLEQAFTEKHYTNTILHSDQSWQYQHDFYHQFLEN
KGIQPSMSRKGNSPDNGMMESFFGILKSEMFYGYEKTFKSLKQLEQAIVD
YIDYYNNKRIKVKLKGLSPVQYRTKSFT
>gid:147119  SMU.566c  conserved hypothetical protein
MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIV
KKGKNRYYSPELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYK
KNRYTIVEKTRGRPPKMGRKPKKKSEEMTELEQLQKELEYLRAENAVLKK
LRELRLREEKEQEEKRKLSEDW
>gid:147131  SMU.580  putative exodeoxyribonuclease VII, large subunit
MSDYLSVSSLTKYLKLKFDRDPYLERVYLTGQVSNFRRRPNHQYFSLKDE
KAVIQATMWSGIYRKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEP
DGIGALAVQFEQLKKKLAEAGYFDDRHKQRLSQFVKKIGVVTSPSGAVIR
DIITTVSRRFPGVDILLFPTKVQGEGAAQEVADNIRLANERTDLDLLIVG
RGGGSIEDLWAFNEEIVVQAIFESHLPIISSVGHETDTTLADFAADRRAA
TPTAAAELATPVTKADLLAFLKERQMRSYQAVMRLIRQKDEQVKKLQRSV
IFRQPERLYDAYVQKLDHLRTHLLTKVRQVYDVYDSKEHLLRQRLLSFNL
SGCIQRYQAQLKQDQRLLLSHMSSQYDSKLARFEKAQDALLSLDTTRIVA
RGYAIVQKDNHIIQSTQQIKKGDRLHLEMKDGQVQVEVENVKQEENI
>gid:147132  SMU.581  putative exodeoxyribonuclease VII, small subunit
MSNKKKTFEENLQDLEEIVNQLETGEIPLEEAITQFQKGMALSKDLQKTL
ESAEKTLVKVMQADGSEAEMDEL
>gid:147140  SMU.589  putative DNA-binding protein
MANKQDLIAKVAEATELTKKDSAAAVDAVFSAVSSYLAKGEKVQLIGFGN
FEVRERAARKGRNPQTGEEIKIKASKVPAFKAGKALKDAVK
>gid:147141  SMU.590c  putative transposase, fragment
MHPKSWTENLTIGVFFDEINVYEKSFKSLDKLEKAITNYIFDYNKKRIKT
KLKGLSPVQYRTKSLQ
>gid:146638  SMU.60  DNA alkylation repair enzyme
MGCLLCYNQAMDKKTLIQTFYDHADQERAHAMAAYMRDQFPFLGLSTPLR
RQLEKDFVKESKASKAVDWVFVEELWELPEREFQYAACDYLRAMQIFLTE
ADLPRLKQLVVTKSWWDTTDSLDRTIGKINFPSSIVDATMLEWSSDDNFW
LRRVAIDHQLLRKDKMKTNLLEKILINNLNQSEFFINKAIGWILRDYSKT
NPDWVRTFIEKHKNQMANLSIKEASKYL
>gid:147161  SMU.611  putative ATP-dependent RNA helicase, DEAD-box family
MKFTELHLAEDILSAVAKVGFVEPSPIQELTIPLALEGKDVIGQAQTGTG
KTAAFGLPTLNKIDVTNNVVQALVIAPTRELAVQSQEELFRFGREKKVKV
RSVYGGSSIEKQIKALKSGAHIVVGTPGRLLDLIKRKALKLNHVETLILD
EADEMLNMGFLEDIEAIISRVPETRQTLLFSATMPDAIKRIGVKFMKEPE
HVKIAAKELTTDLVDQYYIRVKENEKFDTMTRLMDVEQPELSIVFGRTKR
RVDELTRGLKLRGYRAEGIHGDLDQGKRLRVLRDFKNDNLDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKHGQSITFVAPNEMGY
LQIIEKLTKKRMKGMKPATAQEAFQASKKVALKKIERDFADEKIRSNFDK
FTKDAEKLAAEFSPEELAQYILTLTVQDPEMLPKVEIAREKPLPFKFAGK
GKGGNRRREDRRGGRDSRRNHRDGGRREFKRTSNKNRKDFENKSNKRPHR
TSSEKKSGFTIRNKGDR
>gid:147174  SMU.628  conserved hypothetical protein
MIAIEMIEKLKKEELASITVLSGEDFGQYGQMKKLFFNKIGFESSDLNFS
YFDMSETSYQDAEMDLESLPFFADEKIVIFDNFADITTDKKTFLNNNELK
RFEAYLGNPLSSTKLVICASGKLDGKRRLVKLLKRDAQLFEAKVLKEAEL
RTYFQKRAHKDGLVFESGVFESLLIKSNFDFSEVAKNLTFLTSYKKDGHI
RAQDISEAIPKTLQDNIFDLTQFILTGQIDAARDLIRDLRLQGEDEIKLI
AVMLGQFRMFTQIKILSGQNKSETQIVTALSDYLGRKVNPYQVKFALRDS
RTLTLPFLKKAVTLLIETDYAIKSGTYDKDYLFDVALLKLAHENRG
>gid:147379  SMU.851  conserved hypothetical protein
MEFCQHCGMQLVEKMLEHEGQVPYCENCQAFRFPQHDLAVSMIVYDEQMQ
KILLIQQYHMRQYILVAGYVNKGEKLEEAVKREVLEETCLTVEIIAFNAS
SFYEKNQVLMVNFVCRAKKASDLKLNHEVEAANWFHPDQAKEAILSPSLA
KNFLLNWLDKKVH
>gid:147402  SMU.875c  putative transposase, IS150-like
MRILGHHSPIRKKTYHSCTQREITEKARHVHYNVLARNFKAERPLQKLTT
DVSYVYYNYGRMLLSVIKDCYDNSILDYTLSDFNDNKLVFDNIDLVFNNF
WDSTKVCILHSDQGFQYTNQQYLRKLDQYGVTISHSGKGNGYDNAACENF
FSHLKSESLRLFPPKDKRTLIRQIREYINWYNYHRPQEKLKGMTPMEFRK
PYLTK
>gid:147419  SMU.893  putative anticodon nuclease
MKELNRLEDVAVELRDSSKNIKLVYAFNGTGKTRLSMLFKNLIQPQIDIE
AGANFLKKILYYNAFTEDLFTWDNDLENGSERKLLINVNSEWIKKIITIE
GDSARIVEKFQDYVLEDKEDISEKIEAEFNADVTAVSFRRSYQGNLSENI
KISRGEESNFIWSVFYILMEFIIEQRSSEEDRRTHEYDELEYIFIDDPVS
SLDDRRIIDVALDLAYLLKESDKNDTGLKFIITTHHALFFNVLFNELKKS
SSKFLLKKTNQKYLLNSQDNDAPFAYHLMLVDELKKAIAEDRVEKYHFNL
LRNLLEKTATFLGYKNWGACVILRDEDGNLEEPAPYIRRINLHSHSAHSD
YETRALTTQEKKVLERVFNQFLQNFSFNNVE
>gid:147420  SMU.895  possible DNA-damage-inducible protein
MVVKNKANINIKIDLEDKAAADAIFAHMGLTTSAAVNMFIKRVIDDQALP
FTPRVKNTLDIALEQAKNDDVETFDSFDDWKSEMSAYAKD
>gid:147171  comEA  putative competence protein
MVDEFLDKLKEKKNVFALVGGLVVLLGLGVYFFFPSSNKQEDSLARLKEQ
SLQVTTKTGKESQKKTQTTAKSTITVDIKGAVKHEGVYTLPIDSRINDVI
EKAGGFSEKADRKSVNLAQKLQDEAVIYVAAIGENISVIRDSQEGKTSQA
DKANTKETSVKGKVNLNTATLADLQTISGIGEKKAQDILDYREANGGFKS
VDDLKNISGIGDKTFEKLKDLVSVD
>gid:147055  comF  putative late competence protein
MENLENYYGRLLTENQMNSDLKKQAKILPAMIKKPHYFICNRCGSQNNLG
NALPDGSIYCRACLVFGRLTNRDSLYYFEQKPFPKGQVLRWQGQLTPFQQ
EVSRGLKKSVCHKENMLIHAVTGAGKTEMIYETLASILNQGGAVALASPR
IDVCIELYKRLSRDFSCPISLLYGESEAYERSPLVIATTHQLLKFYRAFD
LLIIDEVDAFPFVDNKMLYYAVDHCLKSDGVKVFLTATSTDQLDKQVKQG
KLKKLHLARRFHANPLVVPKPIWLNLSLERLQRGKLPRSFLQQIRIQRQT
QFPLLIFFPNIEDGLTFAKSLQTYLPNEKIDFVSSLTTDRLEKVENFRKG
NTQILVSTTILERGVTFPCVDVFVMMSNHYLFTKSSLVQIAGRVGRSADR
PDGKLLFFHNGMNRAMKKAIMEIKTMNKKGGFA
>gid:147061  dam  putative site-specific DNA-methyltransferase
MSEQIKLANTTLQPFTKWTGGKRQLLPILRSYMPEKYNCYFEPFIGGGAL
FFDLVPEKAVINDFNEELMNTYRQIKNNPTALIELLTEHKEKNSKEYYLK
VRAADRNETITRMSDVERAARLMYMLRVDFNGLYRVNSKNQFNVPYGKYK
NPKIIDRELIYQISDYLNENDIQILNTNFEEAVSNAKKGDFVYFDPPYIP
LNETSSFTSYTHEGFTYEEQLRLRNVFEQLNRKGIYVMLSNSSSPLALDL
YQDYNIHFVDAVRTNGAKTESRKKIKEIIVTNYDE
>gid:146563  dnaA  chromosomal replication initiator protein, DnaA
MTENEQIFWNRVLELAQSQLKQATFDFFVSDAKLLKVEGNIATILLDDMK
KLFWEKNLQPVVLTAGFEVFNTEISIEYVFEETQSTSNSPQISQNKTAEL
ATETLPFVQNDLNPKYSFDNFVIGDENRWAFTASVSVADLPGTTYNPLFI
YGGPGLGKTHLLNAIGNSVLASNPKARIKYISAENFINEFVVHIRLQNMD
ELKKKFRNLDLLLIDDIQSLAKKSLAATQEEFFNTFNALHDNNKQIVLTS
DRTPDDLNDLEQRLVTRFKWGLTVNITPPDFETRVAILNNKIQEYNYSFL
SETIEYLAGQFDSNVRDLEGALKDISLVANFKKLDVITVEVAAEAIRARK
QDSSPKMIVIPIEDIQKQVGKFYGVTVKEIKSTKRTQNIVLARQVGMYLA
REMTDNSLPKIGKEFGGRDHSTVLHAYNKIKNMLAQDDSLKIEMETIKNK
IK
>gid:148374  dnaB  putative chromosome replication protein
MKPIDEFLYVKQNYLTSDTNSLMRLYFPIIGSDAAGLYQYFVSFFDNGEK
KHKFSEILNHTQFGMACFENALSVLTAMDLLVFYRQENLYYIKLKAPLNA
ETFLKNAVYRHLLEQKIGQVAVEHLDLHLPREAQDLSKQFSEVFTAAGQL
DLKTPKSKTDFDLDHFKDLMIRDNLQFTDEQTDVIALYILSEKYQLTWYE
TYLLAKETASNYRISLKRMQAKQEQRDHVDADNSFSKKEQIIIEEAKADK
VEVFLAKIKKTRHAAITKDERSLLAELAEMGFLDEVINIMLLYTLDKTNT
ANINKTYIMKIANDFAFQKIDSAEKAVLKLRSFAERKTKQNQKKIKESSK
NNVPEWSNQDYQNNTTADEQARLDEIKRKTLARLRRDGE
>gid:148577  dnaC  putative replicative DNA helicase (DNA polymerase III delta prime subunit)
MPETSELRVQPQDLIAEQSVLGSVFISPEKLIAVREYIDPEDFYKYAHRV
IFKAMISLSDQNDAIDATTVRAILDNQGDLQNIGGISYLVELVNSVPTSA
NAEYYAKIVAEKAMLRRIISRLTEAVNQAYEGAINSEDIISGAEKALIDV
NERSNRSGFRKISDVLAVNYENLEVRSQQITDVTGLATGFRDLDKITTGL
HPDQLIILAARPAVGKTAFVLNIAQNVGTKMNRPVAIFSLEMGAESLVDR
MLASEGMVDAHNLRTGQLTEQDWQNITLAQGTLADAPIYIDDTPGIKVTE
IRARARKLDQELEKGLGLIVIDYLQLITGTRPENRQQEVSDISRQLKILA
KELGVPVIALSQLSRGVEQRQDKRPVLSDIRESGSIEQDADIVAFLYRDD
YYDRGDKDEGQEQLVDNTIEVILEKNRAGARGTVKLMFQKEYNKFSSIAQ
FEER
>gid:147693  dnaE  DNA polymerase III, alpha chain
MFAQLDTKTVYSFMDSLIDLKSYIKKAKEMGYSHIGIMDGDNLYGAFHFI
KEAQKEKLVPILGLELDLFLSDDLTTVCFIAQNTIGYHNLLKISTAKMTG
QQLFSDIEEFMDGLAIIVPYFEGIDQMDFPFSFYIGVRKDTPQLDFKRDI
LPLHTVRYYDNDDTETLQILHAIRDNLPLREVPPVSKDQYLFSQEEMEQI
FEERFPQSLLNLEKLVANVSYQFDTDLKLPRFSRDKPAVVELKELAQKGL
VEKKLLSDDYQKRLSDELAVIHQMGFDDYFLIVWDLLRFGRSQHYYMGMG
RGSAAGSLVAYALDITGIDPVKNDLLFERFLNEERYSMPDIDIDLPDIYR
SQFLNYVRDRYGSTHSAQIVTFSTFGARQAIRDVFKRFGATEYELSQITK
KISFRDNLTSVYDKKIAFRQLINSKIEYQRAFEIAKKIEGNPRQTSIHAA
GIVMSDDNLTDHIPLKTGEEMMITQYDAPAVEANGLLKMDFLGLRNLTFI
QKMQEKVAQDYGHAIDIRAIDLEDKETLALFAAGDTKGIFQFEAAGAINL
LKRIKPSRFEEVVATTSLNRPGASDYTENFIRRKYGQEEVDLIDSSIASI
LKSTYGIMLYQEQVMQIAQIFAGFTLGKADLLRRAMSKKNTVEMQKMEKD
FLQGADQLGRDLKVAQNLFARMAKFAGYGFNRSHAYAYSALAFQMAYFKV
HYPAVFFDVMLNYSSGDYLSNALETHFKLGPLSINTIPYSDKISHGQIYL
GLKNIKGLNRDFAYWIIGNRPFSSIEDFLIRIPEKYQKTEIITPLIQVGL
FDQFDKNRQKIVVNLEHLFTFVNELGSLFADSSYNWIEAQDYTNAEKYQL
EQDIIGAGVSPHPLIEIAKHSSRHLIALTDLVEGNEATILAQIESIRIIR
TKSRGEQMAFLSVTDTKKKLNITLFPETYQKYKNFLTEKTIYYFTGKIQE
RDNQLQMILHQLDSASTEKCWIKLQNHDCDREISEILAAYPGNIPVVLHY
SNTKETFQSSRYFVAKDPELQEKLAYYALKTLFQ
>gid:147349  dnaG  putative DNA primase
MVVDKEKIKEIKDSINIVDVIGEVVSLSRSGRNYLGLCPFHKEKTPSFNV
IEDRQFFHCFGCGRSGDVFKFVEDYRNISFLESVQVLAERSGINVTLQDK
SQEVKKEHPHQKLFNINGDANKFYQAVLKTTKVGETARQYLYERGLTDEL
ITYFKIGLAPNEYDYLYQAMLKKYDEDTIINSGLFNLSDSNSIYDAFRNR
IMFPLTDEFGHIIGFSGRIWTEEDTSKKLAKYKNTRSTIIFNKSYELYHL
DKARTAAKKEHELYLMEGFMDVIAAYRAGIPNAVASMGTALTPEHVKHLR
KFTKKVILTYDGDKAGQNAIAKSLNLLSNMAVEIVRIPGQMDPDEFIKEN
SEEELEKLLKQARISSAEFWIEHLKPENIDNLQAEIDYVEKIAKVIAASP
SITAQNTYINKVAEFLPDFDYLQVEQAVNNERLQMRSQISEQESANQQVL
IDLPVTKQLTALTKAESQLFHRLLHHDYLLNEFRNRAHFKFTTPELQELY
QILKTNGEINAYDLSQLSNQLQETYYRVLEENLPEEIAEDEIRQIEDQID
KCLQRQEMRKQSKAIRESSNHGDVDTAVEGLAALIAQKRNME
>gid:148373  dnaI  putative DNA replication protein; primosome component (helicase loader)
METIGQTLAKKDNHKYDTEKMTQAILSDQEIANFIAAHHLSKEQIKISLP
KFNQYRLERTRFENHDQAYIAKGYQPLLVMNEGYADVAYKETKELIAAKK
TQAISDRINVVSLPRSYKNISFDDINLDDVKRLDVFKRVADFVEQYPNPE
QKGLYLYGDMGIGKSYLMAAMAHELSEQRGAATTLLHFPSFTIDVKNAIN
TGTVKKEIDAVKTADILILDDIGAEQSTSWIRDEVLQVILQYRMLEELPT
FFTSNYSFKDLEAKLANIKGSDETWQAKRVMERIRYLAKEIHLEGENRR
>gid:146564  dnaN  putative DNA polymerase III, beta subunit
MIKFSINKVFFLQALNATKRAISSKNAIPILSSLKIEVNSQSITLTGSNG
QISIENTISAEEENAGLLVTSSGAILLEANFFINIVSSLPDITLDFEEIE
QHQVVLNSGKSEITLKGKDVEQYPRLQEVGTNNPLILETKLLKTIISETA
FAASTQESRPILTGVHLVLTNHKEFKAVATDSHRMSQRKLTLDHSSDDFD
VVIPSRSLREFAAVFTDDIESVEVFFSNSQILFRSEYISFYTRLLEGNYP
DTDRLLGNNFETEVVFNTNALRYAMERAHLISNATQNGTVKLEIINNQVT
AHVNSPEVGKVNEELDIESLSGNDLTISFNPTYLIEALKALKSETVTIRF
ISPIRPFTLTPSDNSENFIQLITPVRTN
>gid:148042  dnaX  DNA polymerase III, gamma/tau subunit
MYQALYRKYRSQTFDEMVGQEVVAKTLKQAVASKKISHAYLFSGPRGTGK
TSAAKIFAKAMNCPHQADGEPCNNCDICHDITNGSLEDVIEIDAASNNGV
DEIREIRDKSTYAPSRATYKVYIIDEVHMLSTGAFNALLKTLEEPTENVV
FILATTELHKIPATILSRVQRFEFKAIKTKAIKEHLADILKKEGLSFDEE
ALSLIARRAEGGMRDALSILDQALSLTNDNDVSLEIAEEITGSISLRALD
QYVADLLAHETQQALSDLDTIFNNGKSMSRFATDLLNYLRDLLVVQAGGE
NTHHGEAFDKNLTLSQETIFQMIDVVTKSLPEIKNGTHPKIYAEMMTIRL
SENDQKVHSVQDLPDNVAQEIEALKSEIKELKKSLQSLEKGKPFKVTKVQ
KTSFRYKVDKDKVMTIMRETVADSQKSREYLEALKGSWNEILDSISPQDR
ALLMGSEPVLANSENAILAFDAAFNAEQAMKRSDLNAMFGNIMSQASGFS
PKIMAVPRAEFDAIRSEFAHSLKADKDDSQEETTEATKEFIPEGFDFLAD
KIVLEEEP
>gid:148009  dnlJ  DNA ligase
MKERMNELVQLLNQYAREYYTKDNPSVSDAEYDKLYRELVELEKEFPEDI
LPNSPTHRVGDLVLDGFEKYRHEYPLFSLQDAFSREELDAFDRRIKAEFP
QADYLAELKIDGLSISLTYVNGRLRVGATRGDGTVGENITENLKRVRDIP
LHLPENIDLTVRGECYLPKASFKTINAERRENGETEFANPRNAAAGTLRQ
LDTKVVAKRKLATFIYQEAGPTAASSQEAVLESFAKLGFTVNPRHIISSS
MDAIWQFIEDVAKERAELAYDIDGVVIKVNSLALQEALGFTVKAPRWAIA
YKFPAEEKTAEILSVDWTVGRTGVVTPTANLTPVQLAGTTVSRATLHNVD
YIAEKDIRIGDIVVVYKAGDIIPAVLHVVENKRDQQVPLPIPTVCPSCQS
ELIHFEDEVALRCVNPRCPAQLKEKLIHFASRDAMNIIGLGPAIVEKLFT
AELICDVADIYQLTPENLMQLEGIKEKSATKLYKAIQASKANSAEKLLFG
LGIRHVGSKASRLLMERFESLEQLAAADFDDIAAIDGLGIVIAESLKTYF
ATAGAQKLLIELKTAGLNLTYLGKKTASDAALTGMTIVLTGKLANLTRSQ
AKEKLQSLGANVAGSVSKKTSLVIAGSDAGSKLEKAKTLGIEIKDEAWLE
SL
>gid:148106  end3  putative endonuclease III (DNA repair)
MVLSKKHARKVLEEIIALYPDAVPSLNFKNHFELLIAVILSAQTTDAAVN
KVTPALFAAYPRPKDLAKADLKDLESYISQIGLYRNKAKFLKGCSQQLVE
HYNGQIPQTRKELESLSGVGRKTANVVMSVGFGLPAFAVDTHVSRICKHH
NIVKQTASPLEVEKRVTEVLPPEEWLPAHQALIYFGREVCHPKNPECQKY
PQLYEFD
>gid:148105  exoA  putative exodeoxyribonuclease III
MKLISWNIDSLNAALTSDSARALLSRAVLDTLMEQDADILAIQETKLSAK
GPTKKHLRILKDYFPDYDVVWRSSVEPARKGYAGTMFLYKSSLQPTITYP
EIGAPATMDDEGRIITLEFDDFFVTQVYTPNAGDGLKRLDDRQIWDEKYA
IYLAQLDKQKPVLATGDYNVAHKEIDLAHPSSNRRSPGFTDEERAGFTHL
LEQGFTDTFRYIHGDVPNVYSWWAQRSKTSKINNSGWRIDYWLISNRLSD
KILKSEMIDSGTRQDHTPILLKIDL
>gid:148072  fpg  putative formamidopyrimidine-DNA glycosylase
MPELPEVETVRRGLEHLIVGKKIVSVEVRVPKMVKTGVEDFQLDILGQTF
ESIGRRGKYLLLNLNRQTIISHLRMEGKYLLFEDEVPDNKHFHLFFGLDG
GSTLVYQDVRKFGTFELLPKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGL
AKSHKVIKTLLLDQHLVAGLGNIYVDEVLWAAKVDPERLASQLKKSEIKR
IHDETIRILQLAIEKGGSTIRSYKNSLGEDGSMQDCLQVYGKTDQPCARC
ATPIEKIKVGGRGTHFCPSCQKQ
>gid:147619  gyrA  DNA gyrase A subunit
MRHFLMQDRNLVDVNLTSEMKTSFIDYAMSVIVARALPDVRDGLKPVHRR
ILYGMNELGVTPDKPHKKSARITGDVMGKYHPHGDSSIYEAMVRMAQWWS
YRHMLVDGHGNFGSMDGDGAAAQRYTEARMSKIAMEMLRDINKNTVDFAD
NYDGSEREPLVLPSRFPNLLVNGATGIAVGMATNIPPHNLGETIDAVKLV
MDNPDVTTRDLMEVLPGPDFPTGALVMGKSGIHRAYDTGKGSIVLRARTE
IEQTKSGRERIVVTEFPYMVNKTKVHEHIVRLAQEKRIEGITAVRDESSR
EGVRFIIEVRRDASANVILNNLFKLTSLQTNFSFNMLAIEKGVPKILSLR
QILDNYIDHQKEVIVRRTKFDKAKAESRAHILEGLLIALDHLDEVITIIR
NSETDTIAQAELMSRFDLSERQSQAILDMRLRRLTGLERDKIQSEYNDLL
ALIADLADILAKPERVITIIKDELEDIKRKFADQRRTELMVGEVLSLEDE
DLIEEEDVLITLSNKGYIKRLGQDEFRTQKRGGRGVQGTGVNDDDFVREL
VSTSTHDAMLFFTNQGRVYRLKGYEIPEYGRTAKGLPIVNLLKLDDGETI
QTIINVKSDDFHDKYLFFTTRQGVVKRTSVSAFGNIRQNGLKALSLRDND
ELINVLLTNGQEDIIIGTHLGYSVRFQESAVRNMGRLATGVKGVNLRKND
YVIGADHIADSRNVLTITEKGYGKQTPASEYPTKGRGGKGIKTANITAKN
GPLAGLVTVNDDEDIMIITDTGVIIRTSVADISQTGRSAMGVKVMRLDEN
AKIVTFALVKSEVIEGTSLNNNENE
>gid:147772  gyrB  putative DNA gyrase subunit B
MTEENKNLDQLAQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVW
EIVDNSIDEALAGFASHIQVFIEEDNSITVIDDGRGIPVDIQQKTGRPAV
ETVFTVLHAGGKFGGGGYKVSGGLHGVGSSVVNALSTQLDVRVHKNGKIH
YQEYHRGVVAEDLKVIGDTDITGTIVHFTPDPEIFTETTEFDFDKLAKRI
QELAFLNKGLKISITDKRSGQERKEEFHYEGGIVSYVEFINENKEVIFDK
PIYTDGSLDGISVEVAMQYTTGFHENIMSFANNIHTHEGGTHEQGFRTAL
TRVINDYAKKNKILKENEDNLNGDDVREGLTAIISVKHPNPQFEGQTKTK
LGNSEVVKITNRLFSDALNRFLLENPQIAKKIVEKGILASKARIAAKRAR
EVTRKKSGLEISNLPGKLADCSSNDPIQNELFIVEGDSAGGSAKSGRNRE
FQAILPIRGKILNVEKATMDKILANEEIRSLFTAMGTGFGAEFDVSKSRY
QKLVIMTDADVDGAHIRTLLLTLIYRFMRPVLEAGYVYIAQPPIYGIKVG
SDIKEYIQPGNDQEEKLQEALEKYSQGRSKPTVQRYKGLGEMDDHQLWET
TMNPDNRLMARVSLDDAAEADKIFDMLMGDRVEPRRGFIEENAVYSTLDV
>gid:148532  hexB  putative mismatch repair protein HexB
MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEES
GLKKIQVTDNGQGIEQADVIMSLRRHATSKIKKQSDLFRIRTLGFRGEAL
PSIASISRLTLKTATKGEIYGTLLIANGGKIEKEEAISTPIGTKVSVENL
FFNTPARLKYMKSLQAELAHIIDVINRLSLAHPEIAFTLINDGRELTKTA
GKGDLRQALAGIYGVTIAKKMVEISNADLDFEVSGYISLPELTRANRNYI
TILINGRYIKNFLLNRAILDGYGSKLMVGRFPIAVIDIQIDPYLADVNVH
PTKQEVRISKEKELMNLVSSAIADSLREQELIPDALENLAKTSTNKKQKF
EQTQLPLKQSNLYYDKTQNDFFLKETTVSEASSEFTVVDKAVNITDNVSG
HSSVKYAQRQMRTCENKEHPSLTMTDKQQKRQLSRIVESLENEEKSTFPE
LEYFGQMHGTYLFAQGEGGLYIIDQHAAQERVKYEYYRDKIGEVDNSLQQ
LLVPYLFEFPANDFMTLQEKMSILNEVGIHLENYGENTFILREHPIWLQE
KEIESAVYEMCDMLLLTNEVSIKKYRAELAIMMSCKRSIKANHTLDDYSA
RNLLIQLSQCKNPYNCPHGRPVLVNFTKADMEKMFRRIQENHTSLRELGK
Y
>gid:148118  holB  putative DNA polymerase III, delta subunit
MELEKLQPKIFQEFQRILQSGKLSHAYLFSGDFASFEMAVLLAQSRFCDS
PIDALPCGQCRSCRLIAENDFSDVKVIEPEGQMIKTATIRDLLREFSSSG
FEGQSQVFIIRDADKMHTNAANSLLKFIEEPQSDTYMILLTQDESRILPT
IKSRTQIFYFPKNRAYLIQQLEQEGLLKSQAEILADLSKDPTQAKEFAQN
NKLLDLLKACERFTAILFDSKNLAYLEVSRLAQLASEKSEQEWVFQLLTF
FLSKNYDKRETLSYLEAIYQAKKMWFSNVSFQNALEYMVIT
>gid:148328  mutS2  putative DNA mismatch repair protein MutS2
MNTKILKALEFDKVKKQFTHFLQSEQGQMELNDLLPMTNQEKIERSFAEI
ADVAQIFQEYASFGFGHSQDISESLRRLELGADLNTQELLAVKRILQMSA
ELKDFYDNLENVDLQILDCLFEKIETFPDLQGSLQAINDGGFIEDFASPE
LTKIRHHIHQNEQQIRQILQEMLKKQGDLLAENLIASRSGRSVLPVKNTY
RHRIAGVIHDISASGNTVYIEPRAVVNLNEEMTQARADERHEMTRILHDL
SDRLRSQTDIIGNNAWLLGHIDFVRGKYLYMRENQASLPSLTTDQTIRLL
SVRHPLLSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQS
GLPILADEGSKVAVFKDIFADIGDEQSIEQSLSTFSSHMTHIVEILQKAN
KDSLVLFDELGAGTDPQEGAALAMSILEHLRLSDIKTMITTHYPELKAYG
IETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAFEIARRLGLSEIIVAE
AENLTNTDSDVNKIIERLENQTIESRRRLDNIREVEQENLKFNRAVKKLY
NEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKPHEIIEA
KGKLKKLVPEIELSKNKVLKKAKKKRAAKVGDDIIVSSYGQRGTLTKRFK
DGRWEAQVGLIKMTLQESEFDLVKSDKAQASQKRQAHLVKRTSQKAPSAR
LDLRGKRYEEAMQELDEFIDQALLNNMAQVDIIHGIGTGVIRDGVTKYLR
RNKQVKEFGYAPQNAGGSGATIVTFK
>gid:147342  mutT  putative MutT-like protein
MSRTSQVILTNMCLIEDGNGNIVMQIRDPKRYSWSGAALPGGHIEEHEGL
VESVIREVKEETGLTIHHPQLVGMKHWYTKEDVRYLVFLYRTSDFEGDLQ
SSAEGQVRWVARKELAELDLAYDMLNLLRVFEEKNLSELFYRERLADDFV
KEFW
>gid:147931  mutX  mutator protein, pyrophosphohydrolase
MTKLATICYIDNGCELLLMHRNKKPNDVHEGKWISVGGKLEKGESPDECA
RREIFEETHLIVKQMDFKGIITFPDFTPGHDWYTYVFKVRDFEGRLISDK
DSREGTLEWVPYNQVLTKPTWEGDYEIFKWILDDAPFFSAKFVYQEQKLV
DKHVIFYEK
>gid:148325  mutY  putative A/G-specific DNA glycosylase
MLNLSDYGIEMWNQDKIISFRKTLLTWYNQEKRDLPWRRTKNPYCIWVSE
IMLQQTQVQTVIPYYERFLDCFPTIEKLADAPEEKLLKAWEGLGYYSRVR
HMQKAAQQVMTDFDGKFPSTYETIAQLKGIGPYTAGAIASIAFDLPQPAV
DGNVMRVIARLFEVNYDIGEAKNRKIFQAIMKILIDPEHPGDFNQALMDL
GTDIESAKNPRPAESPIRSFNAAYLHGTYDKYPIKKPKKKPKPIQIQAFV
VRNAKDEFLLEKNTQGRLLSGFWSFPIMETDFIGQQLDLFDNHDVVLETL
SQKATFEQDYKLKPTWSDLAFTPVKHTFSHQKWTIQLKEGFVEMAELPSN
KEVRWVAMEDFANYPFATPQKKMLAEYLKNK
>gid:148108  ogt  putative methylated-DNA--protein-cysteine S-methyltransferase
MVLYKQIYHSPLGDLSLVANNQGLIGVWFLNQKYFEQGLEGETVIEQANT
ILDQAKQWLDTYFAGENPNMVKFPLNPRGTAFQKRVWQALSEIPWGQTRA
YGDIAQKINCPSARAIGGSVSRNPLSIIIPCHRVLGAAGQMTGYAAGIDK
KMWLLEHEGFKVDK
>gid:147705  parC  topoisomerase IV, subunit A
MSNIQIMSLEDIMGERFGRYSKYIIQERALPDIRDGLKPVQRRILYSMNK
DGNTYDKGYRKSAKSVGNVMGNFHPHGDSSIYDAMVRMSQDWKNRETLIE
MHGNNGSMDGDPPAAMRYTEARLSEIADYLLQDIDKNTVAWAWNFDDTEK
EPTVLPAAFPNLLVNGATGISAGYATDIPPHNLAEVIDTVVYLIDHPSAK
LDKLMEFLPGPDFPTGAIIQGKDEIRKAYETGKGRVVVRSRTEIENLKGG
KKQIVATEIPYEVNKAALVKKIDDVRLNNKVPGIAEVRDESDREGLRIAI
ELKKDADEQTILNYLFKYTDLQINYNFNMVAIDNYTPRQVGIIPMLTSYI
AHRKDIIVARSKFDKEKAEKRLHIVEGLIRVISILDEVIALIRASENKAD
AKENLKISYDFSEEQAEAIVTLQLYRLTNTDIVTLENEEAELRERITTLN
AIIGDERTMYNVMKRELREVKKKFGNPRLSELQAETQTIEIDTASLIVEE
ETYVSVTRGGYIKRTSPRSFNASTVEELGKRDDDDVIFIQNAKTTQELLI
FTNLGNVIYRPIHELADIRWKEIGEHLSQNITNFATDEEILYVDLVDHFE
EGTYYAATRLGQIKRFERRDLTPWRSYKSKAAKYAKLKGDDDQVIRISPI
KLDDVMLITARGYALRFNIEEVPIVGPKAAGIKAINLKEGDSLATAFIAN
TDSIYILTQRGSLKRMTTNLIPVTSRAKRGLQVLRELKSKPHRVFAAGPV
FSEAAGEIDLFTTVGEQGQEEILEIQSQSLEKYEVNLAELLLSERTSNGS
FISDTISDQGVYAAKIKI
>gid:147711  parE  putative DNA topoisomerase IV, subunit B
MAKKKININNYNDDAIQVLEGLDAVRKRPGMYIGSTDGTGLHHLVWEIVD
NAVDEALSGFGNQIDVIINKDGSITVADHGRGMPTGKHAMGIPTVEVIFT
VLHAGGKFGQGGYKTSGGLHGVGSSVVNALSSWLEVEITRDGIVYKQRFE
DGGKPATTLEKVGKAPKSKSGTKVTFMPDAGIFSTTNFVYNTIAERLNES
AFLLKNVTLTLTDERSEEIEHVAFHYENGVQDFVEYLNEDKEILTPVIYF
EGEEADFQVEVALQYNDGFSDNILSFVNNVRTKDGGTHETGLKSAITKAM
NDYARKTGLLKEKDKNLEGSDYREGLSAVLSILVPEEHLQFEGQTKDKLG
SPLARPIVDGLVLEQLTYFLMENGELASNLIRKAIKAREAREAARKARDD
SRNGKKNKKDKGLLSGKLTPAQSKNPKKNELYLVEGDSAGGSAKQGRDRK
FQAILPLRGKVLNTAKAKMDDIIKNEEINTMIYTIGAGAGPDFKVDDSNY
DKIIIMTDADTDGAHIQTLLLTFFYRYMRPLVETGHVYIALPPLYKMSKG
KGAKEVVEYAWTDGELEDLRKKFGKGAMLQRYKGLGEMNADQLWETTMNP
ENRTLIRVTIEDLARAERRVNVLMGDKVPPRRKWIEDNVKFTLEESGVF
>gid:147677  pcrA  ATP-dependent DNA helicase
MAGAGSGKTRVLTHRIAYLIDEKFINPWNILAITFTNKAAREMKERAFAL
NAATQETLIATFHSMCVRILRRDADHIGYNRNFTIVDPGEQRTLMKRIFK
NFNIDSKKWNERAVLAAISNAKNDLLDEIAYENRAGDSYTQLVAKCYKAY
QSELRQSEAMDFDDLIMLTLRLFDQNPDVLAYYQQRYQYIHVDEYQDTNH
AQYQLVKLLASRFKNICVVGDADQSIYGWRGADMQNILDFEKDYPEAKVV
LLEENYRSSKKILQAANDVIKNNRNRRDKKLWTQNDDGEQIVYYRADDEQ
DEAVFVASTIANIVREMGKNFKDFAVLYRTNAQSRTIEEALLKSNIPYTM
VGGTKFYSRKEIRDIIAYLNVIANTADNISFERIVNEPKRGVGPGTLEKI
RNFANLQGMSLLEASENIMLSSIKGKAVQAVYELANMIIDLRSKLDHYSI
TEVVEAVLDSSGYLEVLEIQKTLESQTRIENIEEFLSVTKNFDDTTDDVP
ENETGLERLSRFLNDLALIADTDEAESESAEVTLMTLHAAKGLEFPIVFL
IGLEEGVFPLSRSMEEESELEEERRLAYVGITRAEQMLFITNANSRTLYG
RTSYNRESRFIQEISEDLLVHQGLARPARASFKVSYQDSNETKFGQGMSL
AQALQARKVASQPKKSPFSNSKDDQKEHIDWQIGDTAHHKKWGDGTVLEV
SGSGSAQELKIKFPEIGLKKVLASVAPLEKKET
>gid:146869  polI  DNA polymerase I (POL I)
MTNKKKLLLIDGSSVAYRAFFALYNQIDRFKNPAGLHTNAIYGFHLMLDH
MMKRVEPTHVLVAFDAGKTTFRTEMFADYKAGRAKTPEEFREQLPYIREM
LTALGVSYYDLENYEADDIIGTLDKLAENEDEYDVTIVSGDKDLIQLTDS
NTTVEISKKGVAEFEEFTPDYLMEKMGLTPKQFIDLKALMGDKSDNIPGV
TKIGEKTGLKLLHEHGSLEAIYEHIDSFKTTKMKENLINDKEKAFLSKTL
ATIDTQAPITITLDDIDYSGPQLDALAKFYDEMDFRQFRSQLDSSPKTEN
FEVSYTEVTELKPDMFAPDQFFYFEILNDNYHTQEMIGLAWGDDQAIYAT
TDTSLLTHDLFKEALSKPIKTYDFKRGKVLLSHLGIDLPTASFDSRLAKY
LLSTVENNNISTIARLYTDLPLETDDDVYGKGAKRAIPEKNVLLSHLAKK
ISVLLASEEPMRQKLSANDQLDLLFEMELPLANVLAKMEIAGISVRKETL
QDMERANEIELQALTQEIYDLAGEAFNINSPKQLGVILFEKLGLPLSATK
KTKTGYSTAVDVLERLAHRSPIVAKILEYRQIAKLQSTYIIGLQDSISFD
GKIHTRYLQDLTQTGRLSSVDPNLQNIPVRLEQGRLIRKAFVPEWKESVL
LSSDYSQIELRVLAHISGDEHLIAAFKEGADIHTSTAMRVFGIERPEDVT
PNDRRNAKAVNFGVVYGISDFGLANNLGISRKAAKNYIETYFERYPGIKN
YMDRVVREARDKGYVETLFHRRRELPDINSRNFNIRSFAERTAINSPIQG
SAADILKVAMIHLDQALKKGDYQSRMLLQVHDEIVLEVPNAELEAIQKLV
KETMESAIELSVPLVADENAGQTWYEAK
>gid:147038  priA  primosomal replication factor Y (primosomal protein N')
MTKIAKVIVDVPLMQTDKPFSYKIPEALLSVITAGSRVHVPFGKGNRLLQ
GFVVSVDSGSAQHLKTIIDVLDVEPVLNQEQLELADQMRKTVFSYKISIL
KSMIPNLLNSNYDRLLKPKKGLSQEEKDLIFAGKKQINFSQLNQEIQTKS
LSLIQAGKIDIEYLAKDRKTIKTQKCYDVNLEKLSHLLINKRAKKRQELK
DYLANHPQSGPLSDLYRLFSREVVHYFIKEAVLNISQVEVNRTQSYFENI
IQSDFLDLNPEQQTAVEQITAAIGSSNKPYLLEGITGSGKTEVYLHVIDQ
TLKLGKTAIVLVPEISLTPQMTSRFISRFGSQVAIMHSGLSDGEKFDEWR
KMKSNQAKVVVGARSAIFSPLKNIGAIIIDEEHEATYKQESSPRYHAREV
ALLRAQYHQAVLVLGSATPSIESRARASRGVYNFLQLSQRANPQAHIPKV
KIVDFRDYIGQQKVSNLTPVLLDKIKDRLIKKEQVVLMLNRRGYSSFIMC
RDCGYVDNCPNCDISLTLHMDTKTMNCHYCGFLKGIPYNCPNCQSRQIRY
YGTGTQKAYDELKQVLPEARILRMDVDTTKRKGAHEKILTKFGRHEADIL
LGTQMIAKGLDFPNVTLVGVLNADTSLNLPDFRSSERTFQLLTQVAGRAG
RANKPGEVLIQTYNPNHYAIQLAREQDYEAFYRYEMRIRKALSYPPYYFT
VGLTLSHKDEQEVIKKSYEIVTLIKEGLTDKIKILGPTPKPVARTHNLYH
YQIIIKYRFEDQLEIVLNHILDLTQAKENKKLRLIIDHEPQSFM
>gid:147565  radC  putative DNA repair protein RadC
MTYGPESLSNQELLAILLRTGTKKEHVLNLSIKILNGLDSLADFRSLSLE
ELQEIEGIGQVRSVEIKAMLELSKRINQAEYNFKERILSSERLAKIMMSE
LGDKRQEHLIAIYLDTQNRVIKKQVIFIGSVRRSVAEPREILHYACKSMA
TSLIIVHNHPSGSTYPSENDLRFTEKIKRSCDDLGIVFLDHIIVGKKEYY
SFREETDLV
>gid:148528  recA  recombination protein RecA
MAKRIKKTEEITKKFGDERKKALDDALKNIEKDFGKGAVMRLGERAEQKV
QVMSSGSLALDIALGAGGYPKGRIVEIYGPESSGKTTVALHAVAQAQKDG
GIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGA
VDLVVVDSVAALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKT
IAIFINQLREKVGIMFGNPETTPGGRALKFYSSVRLDVRGNTQIKGTGEQ
KDSNIGKETKIKVVKNKVAPPFKEAFVEIIYGEGISRTGELVKIASDLGI
IQKAGAWYSYNGEKIGQGSENAKKFLADNPEIFDDIDHKVRVQYGLIEED
NTEEKQSSKEKETDEKADKNLVLELDDTIELED
>gid:148593  recF  putative RecF protein, ATPase involved in DNA repair
MWIEKINLKHYRNYTAIESEFSQSLNVFVGQNAQGKTNFLEAIYFLSLTR
SHRTRSDKELIQFGQKELNVSGLLNRVNGKIPLEINLSNKGRTTKINYLK
QPKLSDYIGTMTVVLFAPEDLQLIKGSPSLRRKFIDIDLGQIKPIYLSDL
SNYNHVLKQRNAYLKSEKKVDTDFLFVLDEQLVDYGSKVIEHRLDFIQNL
TKEADKYHFSISNQQEHLKISYLSSVKFDHKKNIRDNFLNLLQKNRQGDI
FKKNTSVGPHRDDLAFFINQMNASFGSQGQHRSLILSLKLAEIELTKTVT
GDYPILLLDDVMSELDNYRQIKLLEGIKDNVQTFITTTSLEHLQQLPKKL
KLFTINQGKVLSE
>gid:148297  recG  putative ATP-dependent DNA helicase, RecG
MDLQSSLAVLKGLGPKSAEKFHRLGIYTIEDLLLYYPFRYEDFKAKSVLD
LLDGEKAVVTGKVVTPANVQYYGFKRNRLSFKIKQDEAVIAVSFFNQPYL
QDKVELDQDIAIFGKWDQKKSALTGMKILAQVTDDMQPVYHVAQGISQSA
LIKAIQSAFEAGYLRFLSENLPQVLLNKYRLLDRQTATRAMHFPKDLEEY
KQALRRIKFEELFYFQLNLQVLKANNKSESNGLLITYDHDQVVAKIAALP
FALTNAQKRSLDEILADMKSGAHMNRLLQGDVGSGKTVIASLAMYAAYSA
GLQSALMVPTEILAEQHYESLRTLFPELSIALLTSGMKAAVRRSALAAIA
DGSVDMIVGTHALIQEGVDYHKLGLVITDEQHRFGVKQRRLFREKGENPD
VLMMTATPIPRTLAITAFGEMDVSLIDELPAGRKPIVTRWVKHEQLDKVL
PWVKEQLKKKEQVYVISPLIEESETLDLKNAVALEEDLKAYFASSANIAL
MHGRMKNDEKEAIMQAFKKGSIDILVSTTVIEVGVNVPNATIMIIMDADR
FGLSQLHQLRGRVGRGEKRSYAILVANPKTDTGKNRMRIMTKTTDGFVLA
EEDLKMRGSGEIFGVRQSGIPEFQVADIVEDYPILEEARKVASQIVAVKD
WCQDKRWAILVQNLKQKEILD
>gid:147945  recJ  putative single-strand DNA-specific exonuclease RecJ
MITSKYAWKINEKKPDDGFFELAKKENLNPTAAQILYERGFKTSKDIEAF
LRPDLSQLHDPFLLNDMDKAVTRIRRAIETNERILIYGDYDADGMTSSSI
AKEALEMLGAEVEAYLPNRFTDGYGPNLSVYKYFIEQQDISLILTVDNGI
AGHDAIAYAQGQGVDVIVTDHHSMPAELPSAYAVVHPEHPDANYPFKCLA
GCGVAFKLACALLESIPTEMLDLVAIGTIADMVSLTDENRVMVKYGLEIL
KQTERVGLQELIALAGVDFADINEETIGFKLAPQLNALGRLDDPNPAVEL
LTGFDDEEAKTIAAMINEKNEERKTIVQAIFEEAMTLVDENKSVQVLAKE
GWHAGVLGIVAGRIMEQINQPVIVLNIENGLAKGSARSLESVNIFNALDA
HRDLFMAFGGHAGAAGMTLEADKLEELSQVLNDYIQEHAIDLSQKSALVI
DEELYLPELSLDTLKGLETLAPFGMNNKKPIFLLRDFTVKQVRTMGQNGA
HLKLKVAQEQAVFDLLAFNYGSLVTEFQQAQHLELAVTLSVNRWNGNTSL
QLMLVDARVEGIQLLDIRARNSALPDGVPFLEDQTDSKAVVLFEIPEKEE
DLLALFENRDFEVIYFKNRIKHQYYLTGSGTREQFAKLYKTIYQFPEFDV
RHKLKELSQFLKIPDILLVKMIQIFDELDFVSIDDGIMTVNKDAQKREIS
DSHIYQDLKKLVKFQELMALGTPQEIYEFLKRDR
>gid:147149  recM  putative recombination protein RecM
MLYPTPIAKLIESFTKLPGIGIKTATRLAFYTIGMSDEDVNNFAKNLLAA
KRELTYCSVCGNLTDDDPCNICTDESRDRSTVLVVEDSKDVSAMEKIQEY
HGLYHVLHGLISPMNGIGPDDINLKSLLTRLRDNSDIHEVIIATNATADG
EATAMYISRVLKPAGITVTRLARGLAVGSDIEYADEVTLLRAIENRTEL
>gid:147136  recN  DNA repair protein RecN
MLLEIAIKNFAIIEEISLNFERGMTVLTGETGAGKSIVIDAMNMMLGSRA
SIDVIRHGSPKAEIEGFFSVDKNPSLEQLLADQGIAFSDELIIRREILQN
GRSISRINGQMVNLATLRAVGQYLVDIHGQHDQEELMRPQKHIQLLDEFG
DEVFQVSKQHYQDLFDHYRDLRKRVLNKRKNEQEHQARIEMLEYQIGEIE
AANLQSGEDTKLLKQRDKLMNHKLIVDTLTNAYVLLDNEDFSSLTNVRSA
MNDLQSLEEYDAEYKDLSNNLSESYYILEDVSKRLETILDHMDFDANTLV
KLEARLDVINTITRKYGGSVDDVLAYFDNISKEYNHLTVNDLAFDDMERE
LKVLERSLLEAAAQLSQKRHAIAETLSQEIKQELKDLYMDKADFKVVFTK
GKFNREGNETVAFHISTNPGEDFKPLVKVASGGELSRLMLAIKSAFSRRE
DKTSIVFDEVDTGVSGRVAQAIAQKIYKIGNHGQVLAISHIPQVIAISDY
QYFIEKQSSKATTVSTVRLLNQEERIEEIAKMLAGDNVTQAARQQAKELL
KK
>gid:146604  recO  putative DNA repair protein RecO
MQTKETRGLVLYNRPFREDDKLVKIFTETSGKHMFFVRHATNSKLSSVIQ
PLILANFILKINNHGLSYIEDYKGVSLFKEINADIYKLAYATYLVSLADA
AISDAVYDAPLFAFLIKTLELMDEGLDYEILTNIFEIQILDRFGVQLNFH
DCVFCHRVGLAFDFSHRYSGLLCPEHYEKDLYRSHLDPNVPYLLNQFQTL
HFDSLKTISVKPDMKQKLRKFIDEVYEDYIGLRLKSKKFIDDLDHWGQVM
K
>gid:147969  rexA  putative exonuclease RexA
MTFKPFLTDQEIASLQIQEAQSDKKQKRTPEQIEAIYTSGTNILVSASAG
SGKTFVMIERIMDKILRGVTIDQLFISTFTVKAAGELKERLEKKITEQLR
LTNDTALKQFLSEQLLGLQTADIGTMDAFTQKLVTQYGYTLGISPNFRIL
QDKSEQDLLKNDVFDDLFTDYRTGDQAELFTKLVRNFAGNRKDSSNFRQI
IYKIYDFSQATDNPQRWLLENFLKGANTYKDFSAIPEQEVKDFLNTLQET
ALALRDVTDLEDYKQVTAKGTPTAAYQRHLKMIEQLQDWVLHFDSLYGRD
GLGKLANDIATLIPSGNDVTVAGVKYPVFRSLHSRLRGLKHLETIFKYQD
QSLPLLQVLQSFTLDFSKQYLQAKMQENAFEFSDIAHFAIQILEENDAIR
QLYIDKYHEVMVDEYQDNNHTQERMLELLSNGRNRFMVGDIKQSIYRFRQ
ADPQIFNQKFKDFQEHPEHGKLILLKENFRSQSEVLDATNSVFTHLMDEA
VGEILYDDTHQLVAGSSAQKIPYPQNETQVLIYDTKDQQNQDLAVEDDSN
QISLGEVKLVAKEIIRLHNEEKVQFEDITLLVSSRTRNDGILQTFDDYGI
PLVTDGGEQNYLKSVEVMVMLDTLRSIDNPLNDYALVALLRSPMFAFDED
DLARLALQNLPDQHKQNLYEKMENARNGQGQQVQLITEALSAKLDAFFET
FLSWREFSLLNSLYDLIWKIYNDKFYYDYVGSLPKSEQRQANLYALALRA
DNFEKTGFKGLSRFIRMIDKILENQNDLADVEVALPKNAVTLMTIHKSKG
LEFKYVFILNIDKKFSIQDMTSPLILSRQNGVGIKYIADMKEELEEKLLP
TVKVSMDTLPYQLNKRELRLATLSEQMRLLYVAMTRSEKKLYLVGKGSQE
KLGDQYDGKSENNHLPVADREHYLTFQDWLLAIEAAYAADELHFKTSFIT
DEDLTEDKMGSLEAEQAYDADNLKDNRQSDDITRALDMLEAVEKLNQHYK
AAIHLPTVRTPSQIKKFYEPVMETEGVEVMQTSYQTKPKFELPQFSKKAK
QDPTALGSSVHELMQRLHLSEQVSLEDILTALAELSVEENVKKAIQVDKI
LHFFQTSQLGKLIQANADKVYREAPFAMLQADPASGEDYVVRGIIDGYIL
FDNRIVLFDYKTDKFTNSQAIKERYRGQMTLYAQALSQSYNIQQVDSYLI
LLGGEKLEVVEI
>gid:147970  rexB  putative exonuclease RexB
MKLLYTDIQYNMIDILAGEAQLAAKAGKRVFYIAPNSLSFEKERAVLETL
PERASFAITITRFEQMARYFVLNDIHQGETIDDNGLVMVFYRVLSSFSDQ
DLRVFGRLKQDAHFINQLVDLYKELKASNLTVLELNQLNSAEKQEDLIKI
FTEVETILSAGHFDNQSKIAFFAQQIKFGHLDTALQDLTIVIDGFTRFSA
EEENLIGLLHEKGVDIIIGTYISQKAYRSTFSNGNVYQASLDFIRGLAGK
FQTKPEYVVSKQEALPAFTKLSQLFESCHDFSDSQLVLTDKDKEHVTIWD
VINQKEEVEHVAKSIRRKLYEGHRYKDILVLLGDADAYKLQIGKIFDKYE
IPYYFGKAESMSSHPLVHFVDSLERVKRYNFRAEDVMNLLKSGLYGKIRQ
NQLDKLEQYVIYADIKGKTKFFKDFTLDNHGQFDLKALNKLRAEVMSPLQ
ELIKIQAQKGDSILQKLTNFLEAISLTNNFSKLIQGVSDTEQEKNEQVWK
TFTVILEQFHTIFGQEKMKLADFLALLRSGMLAADYRTVPASVDVVTVKS
YDLVEPHSNKFVFALGMTQSHFPKIVQNKSLISDEERAKINEATPDNRRF
DIVTKENLKKNHFTALSLFNAATQELVLTLPQILNEAEDNTSSYLLELQD
MGVPVVEKGGNRLAADPEDIGNYKALLSRVIELNRSAIDQELSKEEQTFW
SVAVRYLRQKLAKEGLTIPEVNDKMQTKQVAAEVMAARFPIDQPLNLSSS
ALTTFYNNQYLYFLQYILGLQELETIHPDARNHGTYLHRVFELVMQDQST
DDFDSKLNRAIDITNHEDSFHLVYNEDEESRYALGILEDIARSTATVLKG
DNPVQAESEEEAFELMLDQAVKIRGVIDRIDRLSDGSLGIVDYKSSKNTF
DLQKFYNGLSPQLVTYIEALRSCKNLNDTDKIFGAMYLHMQEPKTDLANM
KSIEKIPETVHKNLSYKGLFLEDEKAHLANGKYHLHDAVYSQKEVDLLLD
YNKRLYRSAAKQIRKGNFLINPYSQDGKSVQGEQLKAITHFEADRHMPYA
RKLYQLPRKEKRQGFLALMQSKKEEEGNDL
>gid:147507  rnh  putative ribonuclease HII
MATIKEIKEQLAAISDLLDPHWTEFEADARSGVQAAVRQRKKIIQADLDE
EVRLENMLRYEKDLYLQGYQAIAGIDEVGRGPLAGPVVAACVILPKNCKI
RHLNDSKKIPKKKHEEIYKQVVKVALAIGIGRISSEMIDQVNIYEATKMA
MLQAIDDLQGLVSRPDYLLIDAMNLGISIPQSSIIKGDAHSLSIAAASIV
AKVTRDRMMIGYDEIYPGYGFAQNVGYGTKQHLEGLETLGVTPIHRRTFE
PIKSMLKEKN
>gid:148331  rnh3  putative ribonuclease
MNTFVLQLDEETIQHLIQTLKEYQVQNANPYIRFAAKFKQATILIYASRK
VVFQGKNASAVAQELGYKPVVHKSNQDNIKNKQDCSLIGSDEVGNGSYFG
GLAVVASFVKQADHAFLKELGVDDSKNLTDVKIKQIAPLLEAKLPHKALL
LSPQKYNEVVGDNKLHNAVSVKVALHNQAIFLLLQEGWQPDKIVIDAFTS
PKNYQKYLKNENNRFSNPLTLEERAEGKYLAVAVSSIIARKLFLDNLDEL
SQKVGFNLPSGAGQQSDKIASQILKTYGELGLETTAKLHFKNTKKAYQLL
KKE
>gid:148531  ruvA  putative Holliday junction DNA helicase RuvA
MYDYIKGNLTKITAKYIVLETGGLGYVINVANPYSFSNQINQAIQIYIHH
VVREDAHLLYGFHTEDEKAVFLNLISVSGIGPTSALAIIAADDNEGLVKA
IDHSDVNYLMKFPKIGKKTAQQMVLDLAGKFVDINEVSTDKSKVSTINNN
QELEEAVEALLALGYKTNELKKIEKFFEGTTDTAENYIKSALKMLMK
>gid:146641  ruvB  Holliday junction DNA helicase RuvB
MLFCLLRFCYNSLMTRILDNELMGDEEFAERTLRPQYLQEYIGQDKVKDQ
LKIFIKAAKQRDEALDHVLLFGPPGLGKTTMAFVIANELGVNLKQTSGPA
IEKAGDLVAVLNDLEPGDVLFIDEIHRLPMAVEEVLYSAMEDFYIDIMIG
AGETSRSVHLDLPPFTLIGATTRAGMLSNPLRARFGITGHMEYYTDIDLT
EIVERTADIFEMTITHQAALELARRSRGTPRIANRLLKRVRDYAQIMGDG
LIDDKITDKALTMLDVDHEGLDYVDQKILKTMIEMYHGGPVGLGTLSVNI
AEERETVEDMYEPYLIQKGFIIRTRSGRVATAKAYEHLGYRYTE
>gid:147514  smf  putative DNA processing Smf protein
MDNFQLFKLKKAGLTNLNILNIIDYEERTQKSLSLRDMAVVSKNKKPLIF
MEHYKNLDSKALRKEFNRFPSLSILDKEYPLELKNIYNPPVLLFYQGDLD
LLARPKLAVVGSRNASQMGVAAVKKIIQDLSKQFVIISGLARGIDTAAHL
ASLKSGGATIAVIGTGLDVHYPKENRRLQDYIAKNHLLLSEYEAQSQPLK
YHFPERNRIIAGLSQGVMVAEAKIRSGSLITCERAMEEGRDVFVVPGNIL
DGQSEGCHHLIQEGAKCITSGFDILNEFNF
>gid:148321  ssb  putative single-stranded DNA-binding protein
MINNVVLVGRMTRDAELRYTPSNQAVATFTLAVNRNFKNQNGEREADFIN
IVIWRQQAENLANWAKKGTLLGITGRIQTRNYENQQGQRVYVTEVVADNF
QILESRATREGQSNSYNAGGNNNFGGNNFSSQGSSQSQTPNFARDESPFG
DSNPMDISDDDLPF
>gid:148413  ssb2  putative single-stranded DNA-binding protein
MYNKVILIGRLVATPEMVKTPKDKSVTRVTLAVNRRFKSQDGEKQADFVN
VVLWGRLAETIASYGSKGSLISLDGELRTRKYEKDGVTHFVTEVLGHSFQ
LLESRAQRAMRENNSENDLADLVLEEEELPF
>gid:148530  tagI  putative 3-methyl-adenine DNA glycosylase I
MKRCSWVKESNPLYVVYHDEEWGKPLHDEQRLFELLCLETYQAGLSWETI
LNKREAFKSVFHHYEIDKVAAMSDEVLEEILKNPKVVRNRRKVYATRHNA
QAFLAIQKTFGSFDHYLWSWVNFTPIDNFVKNCQSIPAQTNLSERLAKDL
KKKGFKFVGPVCIYSYLQAAGLINDHEVNCDFNPKK
>gid:147544  tnr5  putative transposon integrase; Tn916 ORF3-like
MSEKRRDHKDRILRTGESQRKDGRYLYKYVDSFGETQFIYSWKLVATDRV
PAGKRDCIALREKIAEIQKDVQDGIDVIGKKMTLCQLYAKQNAVRPNVKA
NTKSGRKYLMEILKNDRLGARSIDSIKPSDAKEWAIRMSENGFAYSTINN
YKRSLRASFYIAIQDDYVRKNPFDFQLNTVIDDDTIPKTVLTSEQEARLL
DFAKSDTVYHKNYDEILILLKTGLRISELCGLTVSDLDFENHLISVDHQL
LRNTELGYYIETPKTKSSERQIPMEATCQALKRTLAKRDDRKCVEIDGYS
HFLFLNRKGYPKTSGDFDRILRNLIKKYNKYHEEKLPHITPHTLRHTFCT
NCANAGMNPKALQYIMGHANITMTLNYYAHATYKFGYG
>gid:147515  topA  putative DNA topoisomerase I
MTSKTTTTVKKTSKKRATPKKNLVIVESPAKAKTIEKYLGRSYKVVASVG
HIRDLKKSSMSIDFDNNYEPQYINIRGKGPLINSLKKEAKNAKQIFLASD
PDREGEAISWHLAHILDLDLKGKNRVVFNEITKDAVKNAFVEPRQIDMDL
VDAQQARRVLDRIVGYSISPILWKKVKKGLSAGRVQSVALKLIIDRENEI
KAFKPEEYWSIDGFFKKGNKKFQANFYGLDNKKTKLKSNDDVKKVLTRIK
NDDFLVDKVEKKERKRNAPLPYTTSSLQQDAANKINFRTRKTMMVAQQLY
EGIRLGSNGQQGLITYMRTDSTRISPVAQNDAANYITEHFGAEYSKHGNH
VRNASGAQDAHEAIRPSNVNHTPESIAKYLDKDQLKLYTLIWNRFVASQM
TAAVFDTVKVNLTQNGVLFIANGSQIKFKGYMAVYNDSDKTKVLPEMIKG
ETVKKISANPEQHFTQPPARYSEASLIKTLEENGVGRPSTYAPTLETIQK
RYYVRLVSKRFEPTELGEIVNSLIIEFFPDIVDVKFTAEMESKLDEVEIG
KEEWQKVIDQFYKPFEKEVIKAEEQMEKIQIKDEPAGFDCDVCGHPMVIK
LGRYGKFYACSNFPDCHNTKAITKEIGVICPICQKGQVIERKTKRNRIFY
GCDRYPDCDFTSWNKPIGRDCPKSGDFLVEKKIRGGGKQVVCSNEECDYK
EKAVK
>gid:146568  trcF  putative transcription-repair coupling factor
MNLIDLFKQNQKIKEWTEHLSAPTRQLVMGFSSSSKALAIAAAYKQQKGK
IVIVTSTQNEAEKLATDLISLIGEEEVYQFFADDVAAAEFIFASQDRTNS
RVESLNFLLDKEKSGILMTSIVGIRILLPSPQNYQAAQFKLKVGEEYNLD
NIIKQLSNIGYQKVAQVYNPGEFSKRGDILDIYEINQPYPYRLEFFGDEI
DGIRTFDPDDQRSLSNLDSFILIPSDDIILTDSDFDQACYNLEKALITAN
DSLQPYLKEVLSVTKDHYRHQDVRKFLSFFYQKEWTLLNYLPEQTPLFFD
DFQRIIDRNSHFDLDIANLLTEDLQNSKAVSSLSYFANNYKDLRHYQPAT
FFSNFHKGLGNLKFDYLYNFTQYPMQEFFNQFPLLIDEIRRYQKSEMTVL
LQTDSQQSQGRLQKALQGYNFNLPISQVDNLLKKQAQLTIGNLSTGFYFA
DEKLVLITEREIFHKKVKHKRRRSYISNAERLKDYNELEKGDYVVHNVHG
IGRFLGIETIEVSGVHRDYLTIQYQNADRISIPIEQIELLSKYVASDGKE
PKINKLNDGRFQRIKQKVSKQVEDIADDLLKLYAERSQLKGFAFSPDDKN
QEEFDNDFAYVETEDQLRSIKEVKKDMEKDQPMDRLLVGDVGFGKTEVAM
RAAFKAVNDDKQVAVLVPTTVLAQQHYNTFKERFENFPVNVAMMSRFKTK
TEQSETLTKLAKGQVDIIIGTHRLLSKDVTFKDLGLLVIDEEQRFGVKHK
ETLKELKTKVDVLTLTATPIPRTLHMSMLGIRDLSVIETPPSNRYPVQTY
VMETNASVIREAIMREIDRGGQIFYIYNRVDTIDKKVAELRELIPEANIG
FVHGKMSEIQLENTLLDFISGEYDLLVTTTIIETGIDISNVNTLFIENAD
YMGLSTLYQLRGRVGRSNRIAYAYLMYHPDKILTEVSEKRLEAIKGFTEL
GSGFKIAMRDLSIRGAGNILGSSQSGFIDSVGFEMYSQLLEEAIAAKQGQ
RKTRSKGNAEINLQIDAYLPTNYISDERQKIEIYKRIREIESKTDYQALQ
DELIDRFGDYPDQVAYLIEIGLLKAYLDDAFVESLDRKQNSVVVCFEKIS
LKFYLTQDYFEALSKTNLKARISENKGKIEIVFDVRAKKEYEILEELIKF
GKILKKLKDKKK
>gid:147715  ung  putative uracil DNA glycosylase
MEHSAWHDLIKKELPEGYFAQINHFMNEVYAQGVIYPPRDKVFNAIQTTP
LDKVKVVIIGQDPYHGPNQAQGLSFSVPDQVPAPPSLQNILKELADDIGQ
KQSHDLTSWAKQGVLLLNASLTVPEHQANAHANGIWEPFTDAVIKVVNQK
ETPVVFILWGGFARKKKALITNSIHHIIESPHPSPLSAHRGFFGSKPFSQ
TNHFLVAQGLEPIDWLK
>gid:148314  uvrA  putative excinuclease ABC (subunit A)
MQDKLIIRGARAHNLKNIDVEIPRDKLIVMTGLSGSGKSSLAFDTIYAEG
QRRYVESLSAYARQFLGNMDKPDVDSIDGLSPAISIDQKTTSKNPRSTVG
TVTEINDYLRLLYARVGIPYCKNGHGAITASSVEQIVDQVLILPERTRMQ
ILAPVVRRKKGQHKAVFDRIQKDGYVRVRIDGDIMDVAEVPELSKNKMHN
IEVVVDRLVQKDGIRGRLFDSIEAALHLGDGYVIIDTMDDHELIFSEHYS
CPVCGFTVPELEPRLFSFNAPFGSCPTCDGLGIKLEVDLDLVIPDENKTL
REGTLAPWNPISSNYYPQLLEQAMNAFGVDMDKPWKDLSDEDKKLVLHGS
GDTAFHFHYQNDFGGVRDIDIPFEGIISNISRRYHETNSDFTRNVMRSYM
NELPCATCHGYRLNDQALSVRVGGKEGLNIGQVSELSIADHLSLLTHLEL
SENEKTIATPIVKEIKDRLTFLNNVGLNYLTLSRSAGTLSGGESQRIRLA
TQIGSNLSGVLYILDEPSIGLHQRDNDRLISSLKKMRDLGNTLIVVEHDE
DTMMAADWLVDVGPGAGALGGEIVASGTPRQVAKNKKSITGQYLSGKKKI
PVPLDRRKGSGRFIEIKGAAENNLQNINVKFPLGKFIAVTGVSGSGKSTL
VNSILKKVIAQKLNRNSEKPGKYKSISGIEHIDRLIDIDQSPIGRTPRSN
PATYTGVFDDIRDLFAQTNEAKIRGYKKGRFSFNVKGGRCEACSGDGIIK
IEMHFLPDVYVPCEVCHGTRYNSETLEVHYKDKNIAEILNMTVNDAAEFF
APIPKIARKIRTIKDVGLGYVTLGQPATTLSGGEAQRMKLASELHKRSTG
KSFYILDEPTTGLHTDDIARLLKVLERFVDDGNTVLVIEHNLDVIKTADH
IIDLGPEGGVGGGQVIATGTPEQVAEMTESYTGQYLKGRLNEK
>gid:147338  uvrB  excinuclease ABC (subunit B); helicase subunit of the DNA excision repair complex
MIDRKDNNQFHLVSKYEPSGDQPEAIEALVDNIEGGEKAQILKGATGTGK
TYTMSQVIQKVNKPTLVIAHNKTLAGQLYGEFKEFFPDNAVEYFVSYYDY
YQPEAYVPSSDTYIEKDSSVNDEIDKLRHSATSALLERNDVIVVASVSCI
YGLGSPKEYADSVVSLRPSQEISRDQLLNDLVDIQFERNDIDFQRGRFRV
RGDVVEIFPASRDEHAFRVEFFGDEIDRIREIESLTGRVLGEVDHLAIFP
ATHFMTNDEHMEVAIAKIQKEMKEQVRLFEAEGKLIEAQRIRQRTEYDVE
MLREMGYTSGVENYSRHMDGRSEGEPPYTLLDFFPEDFLIMIDESHMTMG
QIKGMYNGDRSRKEMLVNYGFRLPSALDNRPLRREEFESHVHQIVYVSAT
PGDYEMEQTDTVIEQIIRPTGLLDPEVEVRPTMGQMDDLLGEINTRADKG
ERTFITTLTKKMAEDLTDYLKEMGVKVKYMHSDIKTLERTEIIRDLRLGV
FDVLIGINLLREGIDVPEVSLVAILDADKEGFLRNERGLIQTIGRAARNS
QGHVIMYADTVTQSMRRAIDETHRRRQIQMAYNEEHGIIPQTIKKDIRDL
IAITKANDSEVAEEAVDYNAMTKSERQEAIKKLQKQMQEAAELLDFELAA
QIRDMVLELKAMD
>gid:147741  uvrC  putative excinuclease ABC (subunit C)
MNELIKHKLELLPDSPGCYIHKDKNGTIIYVGKAKNLKNRVRSYFHGSHN
TKTELLVSEIEDFEYIVTGSNTEALLLEINLIQENKPKYNIRLKDDKSYP
FIKITNEPYPRLLITRQVKKDGGLYFGPYPDSGAATEIKRLLDRLFPFKK
CTNPANKVCFYYHLGQCKAHTICQTDQTYWDSLKEDVKNFLNGRDDKIVN
ELRDKMTKASELMEFERAAEYRDLIEGIGLLRTKQRVMNQDMQDRDIFGY
YVDKGWMCVQVFFIRQGKLIQRDVNMFPYYNESEEDFLTYVGQFYQDNRH
FIPKEIFIPRNIDETLVKAVVNTKIIKPQRGEKKQLVNLATKNARVSLQQ
KFDLLEKDIRKTHGAIENIGDLLNIPKPVRIEAFDNSNIQGTSPVAAMVV
FVDGKPSKKDYRKFKIKTVIGPDDYASMREVIYRRYSRVMRDGLTPPDLI
IIDGGQGQVNVARDVIENKLGLDIPIAGLQKNDKHQTHELLFGDPLEVIP
LPRNSEEFFLLQRIQDEVHRFAITFHRQLRGKNTFSSKLNGIAGLGPKRK
QLLMKHFKNLPNIQKASLDDIINCGIPKNVAENIQESLREEREKG