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2024-05-06 14:04:06

Gene list

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COG category: Replication, recombination and repair
Organism: Streptococcus mutans UA159, UA159

Number of genes found: 139

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Streptococcus mutans UA159, UA159
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SMU.766 conserved hypothetical proteinchromosome CDS715085 519 + 0.348748
NA SMU.767 putative transposase, ISSmu1chromosome CDS715597 837 + 0.366786
SMU.1024c putative transposase fragmentchromosome CDS976530 162 - 0.296296
SMU.1034c putative integrase/recombinase; XerC-likechromosome CDS982973 1071 - 0.352007
SMU.1209c hypothetical proteinchromosome CDS1149743 1341 - 0.313945
SMU.123 DNA polymerase III, alpha subunitchromosome CDS122905 4398 + 0.402683
SMU.1238c conserved hypothetical proteinchromosome CDS1176737 588 - 0.391156
SMU.1257c conserved hypothetical proteinchromosome CDS1190156 672 - 0.373512
SMU.1259 conserved hypothetical protein; possible restriction endonucleasechromosome CDS1191675 327 + 0.321101
SMU.1313c putative ATP-dependent DNA helicase; DNA polymerase III, epsilon subunit (3'-5' exonuclease)chromosome CDS1237890 2463 - 0.369468
SMU.1329c putative transposasechromosome CDS1252672 474 - 0.421941
SMU.1330c putative transposasechromosome CDS1253191 141 - 0.375887
SMU.1331c putative transposasechromosome CDS1253406 546 - 0.404762
SMU.1332c putative transposasechromosome CDS1254039 264 - 0.420455
SMU.1351 putative transposase fragmentchromosome CDS1292444 369 + 0.382114
SMU.1352 putative transposasechromosome CDS1292790 324 + 0.361111
SMU.1353 putative transposasechromosome CDS1293138 156 + 0.371795
SMU.1354c putative transposase fragmentchromosome CDS1293679 261 - 0.40613
SMU.1355c putative transposase fregmentchromosome CDS1293954 294 - 0.387755
SMU.1363c putative transposasechromosome CDS1296600 282 - 0.351064
SMU.1370c putative transposase, IS150-likechromosome CDS1302181 618 - 0.37055
SMU.1372c hypothetical proteinchromosome CDS1303560 243 - 0.407407
SMU.1373c hypothetical proteinchromosome CDS1303978 183 - 0.36612
SMU.1379 conserved hypothetical proteinchromosome CDS1307343 519 + 0.348748
SMU.1380 chromosome misc_feature1307855 837 + 0.366786
SMU.1388 putative RNA helicasechromosome CDS1315663 1083 + 0.365651
SMU.1404c conserved hypothetical proteinchromosome CDS1330076 867 - 0.364475
SMU.1407c putative transposase, ISSmu1chromosome CDS1336342 837 - 0.366786
SMU.1408c conserved hypothetical proteinchromosome CDS1337172 519 - 0.348748
SMU.1465c conserved hypothetical protein; replication protein DnaD-likechromosome CDS1393355 696 - 0.389368
SMU.149 putative transposasechromosome CDS152999 303 + 0.379538
SMU.1616c conserved hypothetical proteinchromosome CDS1544728 471 - 0.433121
SMU.1634c conserved hypothetical proteinchromosome CDS1558411 552 - 0.355072
SMU.1714c hypothetical proteinchromosome CDS1623515 738 - 0.317073
SMU.1733c putative SNF helicasechromosome CDS1638005 3093 - 0.346912
SMU.175 hypothetical proteinchromosome CDS172710 129 + 0.387597
SMU.1753c conserved hypothetical proteinchromosome CDS1662432 294 - 0.411565
SMU.1754c conserved hypothetical proteinchromosome CDS1662736 396 - 0.371212
SMU.1755c conserved hypothetical proteinchromosome CDS1663207 300 - 0.403333
SMU.1757c conserved hypothetical proteinchromosome CDS1663475 285 - 0.392982
SMU.1758c conserved hypothetical proteinchromosome CDS1663756 645 - 0.387597
SMU.176 hypothetical proteinchromosome CDS172926 156 + 0.416667
SMU.1760c conserved hypothetical proteinchromosome CDS1664429 876 - 0.378995
SMU.1776c conserved hypothetical proteinchromosome CDS1678998 246 - 0.308943
SMU.1812 putative transposase, ISSmu2chromosome CDS1710468 1251 + 0.383693
SMU.1816c putative maturase-related proteinchromosome CDS1714504 234 - 0.423077
SMU.1817c putative maturase-related proteinchromosome CDS1715071 207 - 0.400966
SMU.1855 hypothetical proteinchromosome CDS1753859 687 + 0.323144
SMU.1875 putative exodeoxyribonuclease V, similar to conjugation transfer proteinchromosome CDS1766522 2364 + 0.36802
SMU.1888 hypothetical protein; possible transposase fragmentchromosome CDS1780765 207 + 0.362319
SMU.1893c putative transposase, ISSmu1chromosome CDS1781999 837 - 0.366786
SMU.1894c conserved hypothetical proteinchromosome CDS1782829 519 - 0.348748
SMU.191c putative integrasechromosome CDS192029 1164 - 0.283505
SMU.1979c conserved hypothetical proteinchromosome CDS1851492 954 - 0.334382
SMU.197c hypothetical proteinchromosome CDS195072 2427 - 0.360939
SMU.2056 putative ATPasechromosome CDS1926593 1284 + 0.440031
SMU.2078c conserved hypothetical proteinchromosome CDS1951220 420 - 0.388095
SMU.2091c DNA mismatch repair proteinchromosome CDS1960922 2550 - 0.377647
SMU.2120c putative 3-methyladenine DNA glycosylasechromosome CDS1987822 579 - 0.385147
SMU.221c putative integrasechromosome CDS212568 546 - 0.331502
SMU.222c hypothetical protein; possible integrase fragmentchromosome CDS213510 195 - 0.302564
SMU.226c putative transposasechromosome CDS214544 549 - 0.433515
SMU.31 hypothetical proteinchromosome CDS36331 621 + 0.305958
SMU.341 putative deoxyribonucleasechromosome CDS322265 900 + 0.44
SMU.342 conserved hypothetical proteinchromosome CDS323332 636 + 0.419811
SMU.403 putative DNA-damage-inducible protein Pchromosome CDS378579 1113 + 0.384546
SMU.436c putative transposase, ISSmu1chromosome CDS406250 837 - 0.366786
SMU.458 putative ATP-dependent RNA helicasechromosome CDS426390 1344 + 0.366071
SMU.472 conserved hypothetical protein; possible N6-adenine-specific DNA methylasechromosome CDS440234 1155 + 0.380952
SMU.505 putative adenine-specific DNA methylasechromosome CDS474477 810 + 0.335802
SMU.516 conserved hypothetical proteinchromosome CDS484636 540 + 0.396296
SMU.561c putative hydrolase (MutT family)chromosome CDS524568 516 - 0.368217
SMU.565c putative transposase, ISSmu1chromosome CDS529007 837 - 0.365591
SMU.566c conserved hypothetical proteinchromosome CDS529837 519 - 0.348748
SMU.580 putative exodeoxyribonuclease VII, large subunitchromosome CDS541399 1344 + 0.400298
SMU.581 putative exodeoxyribonuclease VII, small subunitchromosome CDS542717 222 + 0.382883
SMU.589 putative DNA-binding proteinchromosome CDS549332 276 + 0.398551
SMU.590c putative transposase, fragmentchromosome CDS549699 201 - 0.353234
SMU.60 DNA alkylation repair enzymechromosome CDS60562 687 + 0.414847
SMU.611 putative ATP-dependent RNA helicase, DEAD-box familychromosome CDS574295 1554 + 0.421493
SMU.628 conserved hypothetical proteinchromosome CDS587081 1041 + 0.336215
SMU.851 conserved hypothetical proteinchromosome CDS799021 492 + 0.367886
SMU.875c putative transposase, IS150-likechromosome CDS825849 618 - 0.37055
SMU.893 putative anticodon nucleasechromosome CDS848735 1146 + 0.314136
SMU.895 possible DNA-damage-inducible proteinchromosome CDS849954 273 + 0.32967
comEA putative competence proteinchromosome CDS583200 678 + 0.376106
comF putative late competence proteinchromosome CDS467118 1302 + 0.384025
dam putative site-specific DNA-methyltransferasechromosome CDS473630 858 + 0.294872
dnaA chromosomal replication initiator protein, DnaAchromosome CDS194 1359 + 0.334805
dnaB putative chromosome replication proteinchromosome CDS1801445 1170 - 0.335897
dnaC putative replicative DNA helicase (DNA polymerase III delta prime subunit)chromosome CDS2000433 1365 - 0.383883
dnaE DNA polymerase III, alpha chainchromosome CDS1133433 3105 - 0.352013
dnaG putative DNA primasechromosome CDS765772 1779 + 0.356942
dnaI putative DNA replication protein; primosome component (helicase loader)chromosome CDS1800545 900 - 0.372222
dnaN putative DNA polymerase III, beta subunitchromosome CDS1708 1137 + 0.328056
dnaX DNA polymerase III, gamma/tau subunitchromosome CDS1510427 1677 - 0.410853
dnlJ DNA ligasechromosome CDS1471417 1959 - 0.408882
end3 putative endonuclease III (DNA repair)chromosome CDS1570286 624 - 0.392628
exoA putative exodeoxyribonuclease IIIchromosome CDS1569394 828 + 0.427536
fpg putative formamidopyrimidine-DNA glycosylasechromosome CDS1543232 822 - 0.418491
gyrA DNA gyrase A subunitchromosome CDS1053761 2478 - 0.394673
gyrB putative DNA gyrase subunit Bchromosome CDS1205637 1953 - 0.402458
hexB putative mismatch repair protein HexBchromosome CDS1958469 1956 - 0.351738
holB putative DNA polymerase III, delta subunitchromosome CDS1579385 876 - 0.353881
mutS2 putative DNA mismatch repair protein MutS2chromosome CDS1761476 2331 - 0.383955
mutT putative MutT-like proteinchromosome CDS759399 465 + 0.412903
mutX mutator protein, pyrophosphohydrolasechromosome CDS1386767 480 - 0.352083
mutY putative A/G-specific DNA glycosylasechromosome CDS1758607 1146 + 0.390925
ogt putative methylated-DNA--protein-cysteine S-methyltransferasechromosome CDS1571364 495 - 0.412121
parC topoisomerase IV, subunit Achromosome CDS1144147 2457 - 0.410663
parE putative DNA topoisomerase IV, subunit Bchromosome CDS1151099 1950 - 0.428205
pcrA ATP-dependent DNA helicasechromosome CDS1113511 2202 - 0.41099
polI DNA polymerase I (POL I)chromosome CDS284102 2637 + 0.40273
priA primosomal replication factor Y (primosomal protein N')chromosome CDS446901 2385 + 0.367296
radC putative DNA repair protein RadCchromosome CDS1000418 630 - 0.342857
recA recombination protein RecAchromosome CDS1954455 1152 - 0.391493
recF putative RecF protein, ATPase involved in DNA repairchromosome CDS2017396 1092 + 0.320513
recG putative ATP-dependent DNA helicase, RecGchromosome CDS1728295 2016 - 0.386409
recJ putative single-strand DNA-specific exonuclease RecJchromosome CDS1398203 2205 - 0.385941
recM putative recombination protein RecMchromosome CDS556993 600 + 0.391667
recN DNA repair protein RecNchromosome CDS545092 1659 + 0.38698
recO putative DNA repair protein RecOchromosome CDS28724 756 + 0.320106
rexA putative exonuclease RexAchromosome CDS1421898 3639 - 0.383072
rexB putative exonuclease RexBchromosome CDS1425526 3243 - 0.388221
rnh putative ribonuclease HIIchromosome CDS940639 783 + 0.395913
rnh3 putative ribonucleasechromosome CDS1764918 912 + 0.347588
ruvA putative Holliday junction DNA helicase RuvAchromosome CDS1957693 594 - 0.326599
ruvB Holliday junction DNA helicase RuvBchromosome CDS65217 1035 + 0.415459
smf putative DNA processing Smf proteinchromosome CDS945912 843 + 0.359431
ssb putative single-stranded DNA-binding proteinchromosome CDS1755859 495 - 0.391919
ssb2 putative single-stranded DNA-binding proteinchromosome CDS1843662 396 - 0.40404
tagI putative 3-methyl-adenine DNA glycosylase Ichromosome CDS1957051 561 - 0.336898
tnr5 putative transposon integrase; Tn916 ORF3-likechromosome CDS981357 1167 + 0.39503
topA putative DNA topoisomerase Ichromosome CDS946849 2118 + 0.372521
trcF putative transcription-repair coupling factorchromosome CDS5234 3489 + 0.318143
ung putative uracil DNA glycosylasechromosome CDS1157564 654 - 0.399083
uvrA putative excinuclease ABC (subunit A)chromosome CDS1747977 2832 - 0.400424
uvrB excinuclease ABC (subunit B); helicase subunit of the DNA excision repair complexchromosome CDS755492 1992 + 0.439257
uvrC putative excinuclease ABC (subunit C)chromosome CDS1179573 1788 - 0.409396