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COG category: Replication, recombination and repair
Organism: Escherichia coli CFT073, CFT073

Number of genes found: 315

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Escherichia coli CFT073, CFT073
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA c5378 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS5123325 3279 - 0.522415
NA c5177 Hypothetical protein in ISSubName: Full=Uncharacterized protein; chromosome CDS4939432 327 + 0.53211
NA c5383 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS5128919 672 - 0.433036
NA c5213 Putative Transposase for IS629SubName: Full=Putative Transposase for IS629; chromosome CDS4966657 891 - 0.539843
NA c5371 Prophage P4 integraseSubName: Full=Prophage P4 integrase; chromosome CDS5115549 1152 + 0.491319
NA c5176 Putative Transposase within prophageSubName: Full=Putative Transposase within prophage; chromosome CDS4938378 783 - 0.510856
NA c5384 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS5129587 393 - 0.445293
NA c5196 Transposase insC for insertion element IS2A/D/F/H/I/KSubName: Full=Transposase insC for insertion element IS2A/D/F/H/I/K; chromosome CDS4952414 291 + 0.498282
NA c5175 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4938218 132 - 0.439394
NA c5197 Transposase insD for insertion element IS2A/D/F/H/I/KSubName: Full=Transposase insD for insertion element IS2A/D/F/H/I/K; chromosome CDS4952728 648 + 0.529321
NA c5166 Partial TransposaseSubName: Full=Partial Transposase; chromosome CDS4931923 219 - 0.511416
NA c5145 Hypothetical proteinSubName: Full=Insertion sequence ATP-binding protein; SubName: Full=Uncharacterized protein; chromosome CDS4921500 756 + 0.537037
NA c5172 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4934476 741 + 0.520918
NA c5167 Putative Transposase for IS629SubName: Full=Putative Transposase for IS629; chromosome CDS4932138 678 - 0.551622
NA c5152 Putative radC-like protein yeeSSubName: Full=Putative radC-like protein yeeS; chromosome CDS4924822 477 - 0.587002
NA c5178 Putative Transposase for IS629SubName: Full=Putative Transposase for IS629; chromosome CDS4939758 888 + 0.545045
NA c5214 Unknown protein of IS629 encoded within prophageSubName: Full=Uncharacterized protein; chromosome CDS4967544 327 - 0.535168
NA c5215 Conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4967922 1764 - 0.477891
NA c5382 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS5128222 714 + 0.378151
NA c5373 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS5120028 2013 - 0.464481
NA c5144 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4920004 1500 + 0.539333
NA c5216 Prophage P4 integraseSubName: Full=Prophage P4 integrase; chromosome CDS4970125 1263 - 0.490103
NA c5198 Hypothetical protein chromosome CDS4953372 171 + 0.479532
NA c5375 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS5122185 159 - 0.578616
NA c5168 Unknown protein of IS629 encoded within prophageSubName: Full=Uncharacterized protein; chromosome CDS4932812 327 - 0.535168
ada ADA Regulatory proteinSubName: Full=ADA Regulatory protein; EC=2.1.1.63; chromosome CDS2596284 1065 - 0.569014
alkA DNA-3-methyladenine glycosylase IISubName: Full=DNA-3-methyladenine glycosylase II; EC=3.2.2.21; chromosome CDS2434020 849 - 0.547703
alkB Alkylated DNA repair protein alkBSubName: Full=Alkylated DNA repair protein alkB; chromosome CDS2595634 651 - 0.53149
c0002 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS534 378 + 0.460317
c0072 TransposaseSubName: Full=Transposase; SubName: Full=Uncharacterized protein; chromosome CDS67723 510 + 0.460784
c0086 TransposaseSubName: Full=Transposase; SubName: Full=Uncharacterized protein; chromosome CDS82026 510 + 0.462745
c0118 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS115372 522 + 0.463602
c0119 Putative Transposase insK for insertion sequence element IS150SubName: Full=Putative Transposase insK for insertion sequence element IS150; chromosome CDS115993 723 + 0.489627
c0138 Unknown protein of IS629 encoded within prophageSubName: Full=Uncharacterized protein; chromosome CDS131044 327 + 0.535168
c0139 Putative Transposase for IS629SubName: Full=Putative Transposase for IS629; chromosome CDS131367 891 + 0.542088
c0198 TransposaseSubName: Full=Transposase; SubName: Full=Uncharacterized protein; chromosome CDS192782 510 + 0.462745
c0232 Putative Transposase insK for insertion sequence element IS150SubName: Full=Putative Transposase insK for insertion sequence element IS150; chromosome CDS226161 723 - 0.489627
c0233 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS226983 531 - 0.463277
c0256 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS249923 222 + 0.441441
c0257 Unknown in ISEc8SubName: Full=Uncharacterized protein; chromosome CDS250214 351 + 0.532764
c0258 Unknown in ISEc8SubName: Full=Uncharacterized protein; chromosome CDS250595 648 + 0.54784
c0259 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS251193 951 + 0.521556
c0261 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS252253 1134 - 0.461199
c0262 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS253450 186 + 0.564516
c0263 Putative TransposaseSubName: Full=Putative Transposase; chromosome CDS253783 687 + 0.54294
c0264 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS254517 255 + 0.490196
c0268 Hypothetical proteinSubName: Full=Insertion sequence ATP-binding protein; SubName: Full=Uncharacterized protein; chromosome CDS256927 756 + 0.537037
c0273 Putative radC-like protein yeeSSubName: Full=Putative radC-like protein yeeS; chromosome CDS259552 492 - 0.577236
c0291 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS271030 609 + 0.428571
c0349 Putative Transposase within prophageSubName: Full=Putative Transposase within prophage; chromosome CDS324082 1125 + 0.507556
c0352 Partial TransposaseSubName: Full=Partial Transposase; chromosome CDS331417 207 - 0.502415
c0354 Unknown protein of IS629 encoded within prophageSubName: Full=Uncharacterized protein; chromosome CDS332304 327 - 0.535168
c0355 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS333750 297 + 0.521886
c0357 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS334492 384 + 0.479167
c0364 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS345925 483 + 0.283644
c0366 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS346889 270 - 0.388889
c0367 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS347299 477 - 0.433962
c0391 CP4-like integraseSubName: Full=CP4-like integrase; chromosome CDS370454 339 + 0.457227
c0396 Insertion element IS1 1/2/3/5/6 protein insASubName: Full=Insertion element IS1 1/2/3/5/6 protein insA; chromosome CDS376600 216 + 0.472222
c0397 InsB protein chromosome CDS377117 177 + 0.474576
c0430 Type 1 fimbriae Regulatory protein fimBSubName: Full=Type 1 fimbriae Regulatory protein fimB; chromosome CDS414420 603 - 0.422886
c0563 Hypothetical proteinSubName: Full=Transposase; SubName: Full=Uncharacterized protein; chromosome CDS542302 510 + 0.460784
c0767 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS749807 459 + 0.457516
c0941 DNA adenine methylaseSubName: Full=DNA adenine methylase; EC=2.1.1.72; chromosome CDS914250 858 + 0.4662
c1165 Putative P4-family integraseSubName: Full=Putative P4-family integrase; chromosome CDS1127702 1203 + 0.487116
c1168 Unknown in IS1NSubName: Full=Uncharacterized protein; chromosome CDS1131407 393 + 0.470738
c1213 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1167823 564 + 0.558511
c1218 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1170358 504 - 0.496032
c1219 Putative TransposaseSubName: Full=Putative Transposase; chromosome CDS1170833 750 - 0.534667
c1224 Transposase insF for insertion sequence IS3A/B/C/D/E/fASubName: Full=Transposase insF for insertion sequence IS3A/B/C/D/E/fA; chromosome CDS1174628 753 - 0.568393
c1225 Transposase insE for insertion sequence IS3A/B/C/D/E/fA/fBSubName: Full=Transposase insE for insertion sequence IS3A/B/C/D/E/fA/fB; chromosome CDS1175364 225 - 0.506667
c1248 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1196895 1038 - 0.442197
c1256 Hypothetical proteinSubName: Full=Transposase; SubName: Full=Uncharacterized protein; chromosome CDS1208636 510 + 0.460784
c1262 Putative Transposase for IS629SubName: Full=Putative Transposase for IS629; chromosome CDS1212504 891 - 0.542088
c1263 Unknown protein of IS629 encoded within prophageSubName: Full=Uncharacterized protein; chromosome CDS1213391 327 - 0.535168
c1268 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1218879 183 - 0.557377
c1282 Putative radC-like protein yeeSSubName: Full=Putative radC-like protein yeeS; chromosome CDS1233881 477 + 0.580713
c1291 Hypothetical proteinSubName: Full=Transposase; SubName: Full=Uncharacterized protein; chromosome CDS1239426 510 + 0.462745
c1384 Hypothetical proteinSubName: Full=Transposase; SubName: Full=Uncharacterized protein; chromosome CDS1311803 510 + 0.462745
c1400 Prophage lambda integraseSubName: Full=Prophage lambda integrase; chromosome CDS1328014 1119 - 0.452189
c1425 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1340428 186 + 0.510753
c1427 Hypothetical proteinSubName: Full=Transposase; SubName: Full=Uncharacterized protein; chromosome CDS1341649 510 + 0.460784
c1444 Prophage Qin DNA packaging protein NU1 homologSubName: Full=Prophage Qin DNA packaging protein NU1 homolog; chromosome CDS1348728 510 + 0.468627
c1452 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1355885 432 + 0.560185
c1483 Putative integrase of prophageSubName: Full=Putative integrase of prophage; chromosome CDS1378215 945 + 0.508995
c1497 Putative single stranded DNA-binding protein of prophageRecName: Full=Single-stranded DNA-binding protein; chromosome CDS1384538 411 + 0.574209
c1513 Putative Nudix hydrolase ymfBRecName: Full=Phosphatase NudJ; EC=3.6.1.-; chromosome CDS1394721 462 - 0.512987
c1519 Prophage lambda integraseSubName: Full=Prophage lambda integrase; chromosome CDS1397370 1143 - 0.433946
c1520 Unknown protein of IS629 encoded within prophageSubName: Full=Uncharacterized protein; chromosome CDS1398656 327 + 0.535168
c1521 Putative Transposase for IS629SubName: Full=Putative Transposase for IS629; chromosome CDS1398979 891 + 0.542088
c1529 Hypothetical proteinSubName: Full=Insertion sequence ATP-binding protein; SubName: Full=Uncharacterized protein; chromosome CDS1402870 756 - 0.537037
c1530 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1403622 1500 - 0.539333
c1552 Unknown protein of IS629 encoded within prophageSubName: Full=Uncharacterized protein; chromosome CDS1415867 327 + 0.535168
c1553 Putative Transposase for IS629SubName: Full=Putative Transposase for IS629; chromosome CDS1416190 891 + 0.542088
c1593 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1445744 291 + 0.395189
c1738 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1574161 459 + 0.459695
c1819 Putative conserved proteinSubName: Full=Putative conserved protein; chromosome CDS1650652 309 - 0.508091
c1893 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1727294 144 + 0.354167
c2160 CTP pyrophosphohydrolaseSubName: Full=CTP pyrophosphohydrolase; EC=3.6.1.-; chromosome CDS1995334 408 + 0.54902
c2212 Probable ATP-dependent helicase yoaASubName: Full=Probable ATP-dependent helicase yoaA; chromosome CDS2042997 1911 - 0.55573
c2254 Exodeoxyribonuclease XRecName: Full=Exodeoxyribonuclease 10; EC=3.1.11.-; AltName: Full=Exodeoxyribonuclease X; Short=Exo X; Short=Exonuclease X; chromosome CDS2077743 717 + 0.516039
c2257 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2080602 603 + 0.515755
c2334 TransposaseSubName: Full=Transposase; SubName: Full=Uncharacterized protein; chromosome CDS2148324 510 - 0.460784
c2392 Putative P4-family integraseSubName: Full=Putative P4-family integrase; chromosome CDS2194512 1221 + 0.487305
c2405 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2207572 1182 - 0.334179
c2418 Prophage P4 integraseSubName: Full=Prophage P4 integrase; chromosome CDS2218378 1044 + 0.528736
c2425 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2231467 378 - 0.460317
c2449 Prophage P4 integraseSubName: Full=Prophage P4 integrase; chromosome CDS2262986 1272 + 0.513365
c2472 TransposaseSubName: Full=Transposase; chromosome CDS2315404 267 + 0.47191
c2473 TransposaseSubName: Full=Transposase; chromosome CDS2315775 480 + 0.475
c2474 TransposaseSubName: Full=Transposase; chromosome CDS2316245 228 + 0.45614
c2496 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2336398 162 - 0.506173
c2497 TransposaseSubName: Full=Transposase; chromosome CDS2336638 858 - 0.505827
c2503 TransposaseSubName: Full=Transposase; chromosome CDS2341416 1197 + 0.577277
c2509 Insertion sequence ATP-binding proteinSubName: Full=Insertion sequence ATP-binding protein; SubName: Full=Uncharacterized protein; chromosome CDS2344917 756 + 0.537037
c2511 Insertion sequence ATP-binding proteinSubName: Full=Insertion sequence ATP-binding protein; chromosome CDS2347151 783 - 0.500639
c2512 TransposaseSubName: Full=Transposase; chromosome CDS2347930 1023 - 0.527859
c2529 Putative radC-like protein yeeSSubName: Full=Putative radC-like protein yeeS; chromosome CDS2365806 447 + 0.579418
c2622 TransposaseSubName: Full=Transposase; SubName: Full=Uncharacterized protein; chromosome CDS2467471 510 - 0.462745
c2639 TransposaseSubName: Full=Transposase; SubName: Full=Uncharacterized protein; chromosome CDS2483231 510 - 0.460784
c2897 Type 1 fimbriae Regulatory protein fimBSubName: Full=Type 1 fimbriae Regulatory protein fimB; chromosome CDS2756729 630 - 0.349206
c2898 Type 1 fimbriae Regulatory protein fimBSubName: Full=Type 1 fimbriae Regulatory protein fimB; chromosome CDS2758106 570 + 0.331579
c3146 Putative DNA-invertase from lambdoid prophage RacRecName: Full=Putative DNA-invertase from lambdoid prophage Rac; chromosome CDS3021386 591 + 0.446701
c3152 Hypothetical proteinSubName: Full=Transposase; SubName: Full=Uncharacterized protein; chromosome CDS3026388 510 - 0.462745
c3189 Hypothetical proteinRecName: Full=Crossover junction endodeoxyribonuclease rusA; EC=3.1.22.4; chromosome CDS3055857 390 - 0.566667
c3204 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3064143 1173 + 0.436488
c3206 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3065702 816 - 0.393382
c3432 TransposaseSubName: Full=Transposase; chromosome CDS3283735 339 - 0.466077
c3468 Hypothetical proteinSubName: Full=Transposase; SubName: Full=Uncharacterized protein; chromosome CDS3329981 510 - 0.460784
c3556 Prophage P4 integraseSubName: Full=Prophage P4 integrase; chromosome CDS3406498 1266 + 0.485782
c3560 Unknown protein encoded by ISEc8 within prophageSubName: Full=Uncharacterized protein; chromosome CDS3410473 405 + 0.493827
c3561 Unknown protein encoded by ISEc8SubName: Full=Uncharacterized protein; chromosome CDS3410874 348 + 0.568965
c3562 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3411270 408 + 0.588235
c3563 Unknown protein encoded by ISEc8 within prophageSubName: Full=Uncharacterized protein; chromosome CDS3411690 1119 + 0.602324
c3575 Transposase insF for insertion sequence IS3A/B/C/D/E/fASubName: Full=Transposase insF for insertion sequence IS3A/B/C/D/E/fA; chromosome CDS3425931 819 - 0.507937
c3576 Unknown in ISSubName: Full=Uncharacterized protein; chromosome CDS3426785 303 - 0.462046
c3577 Unknown protein encoded by ISEc8 within prophageSubName: Full=Uncharacterized protein; chromosome CDS3427169 402 + 0.517413
c3578 Unknown protein encoded by ISEc8 within prophageSubName: Full=Uncharacterized protein; chromosome CDS3427567 348 + 0.586207
c3580 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3427964 393 + 0.56743
c3594 Putative TransposaseSubName: Full=Putative Transposase; chromosome CDS3439254 519 - 0.522158
c3595 TransposaseSubName: Full=Transposase; chromosome CDS3439784 357 - 0.54902
c3596 Hypothetical protein in ISSubName: Full=Uncharacterized protein; chromosome CDS3440140 327 - 0.529052
c3597 TransposaseSubName: Full=Transposase; chromosome CDS3441312 591 - 0.529611
c3607 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3445858 1500 + 0.539333
c3608 Hypothetical proteinSubName: Full=Insertion sequence ATP-binding protein; SubName: Full=Uncharacterized protein; chromosome CDS3447354 756 + 0.537037
c3611 Transposase insD for insertion element IS2A/D/F/H/I/KSubName: Full=Transposase insD for insertion element IS2A/D/F/H/I/K; chromosome CDS3451366 906 - 0.550773
c3612 Transposase insC for insertion element IS2A/D/F/H/I/KSubName: Full=Transposase insC for insertion element IS2A/D/F/H/I/K; chromosome CDS3452264 375 - 0.482667
c3613 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3452810 159 + 0.509434
c3614 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3452972 186 - 0.548387
c3615 Unknown in ISEc8SubName: Full=Uncharacterized protein; chromosome CDS3453103 1482 - 0.549933
c3616 Unknown in ISEc8SubName: Full=Uncharacterized protein; chromosome CDS3454615 351 - 0.524217
c3617 Unknown in putative ISEc8SubName: Full=Uncharacterized protein; chromosome CDS3454962 438 - 0.490868
c3640 Unknown in ISEc8SubName: Full=Uncharacterized protein; chromosome CDS3480253 363 + 0.512397
c3641 Unknown in ISEc8SubName: Full=Uncharacterized protein; chromosome CDS3480612 351 + 0.529915
c3643 Unknown in ISEc8SubName: Full=Uncharacterized protein; chromosome CDS3480993 1101 + 0.552225
c3645 Unknown protein encoded by ISEc8 within prophageSubName: Full=Uncharacterized protein; chromosome CDS3482090 1539 + 0.595192
c3657 Unknown in ISEc8SubName: Full=Uncharacterized protein; chromosome CDS3495431 393 + 0.531807
c3658 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3495830 1602 + 0.548065
c3659 Unknown protein encoded by ISEc8SubName: Full=Uncharacterized protein; chromosome CDS3497824 648 + 0.540123
c3660 Unknown protein encoded by ISEc8SubName: Full=Uncharacterized protein; chromosome CDS3498471 348 + 0.551724
c3662 Unknown protein encoded by ISEc8SubName: Full=Uncharacterized protein; chromosome CDS3498838 1104 + 0.57337
c3663 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3500024 381 + 0.530184
c3671 Putative radC-like protein yeeSSubName: Full=Putative radC-like protein yeeS; chromosome CDS3505352 492 + 0.583333
c3684 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3511126 156 + 0.480769
c3703 Transposase insG for insertion sequence element IS4SubName: Full=Transposase insG for insertion sequence element IS4; chromosome CDS3532771 1350 - 0.536296
c3803 Putative TransposaseSubName: Full=Putative Transposase; chromosome CDS3639888 453 - 0.461369
c4010 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3827694 165 + 0.406061
c4222 Putative DNA processing proteinSubName: Full=Putative DNA processing protein; chromosome CDS4011694 1296 - 0.506173
c4223 Putative conserved proteinSubName: Full=Putative conserved protein; chromosome CDS4012896 2100 - 0.493333
c4503 Insertion element IS1 1/2/3/5/6 protein insASubName: Full=Insertion element IS1 1/2/3/5/6 protein insA; chromosome CDS4289968 273 + 0.479853
c4507 Transposase insF for insertion sequence IS3A/B/C/D/E/fASubName: Full=Transposase insF for insertion sequence IS3A/B/C/D/E/fA; chromosome CDS4293266 813 + 0.504305
c4508 Conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4294099 186 + 0.553763
c4511 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4296883 726 - 0.431129
c4513 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4298906 753 - 0.466135
c4540 Putative maturase-related proteinSubName: Full=Putative maturase-related protein; chromosome CDS4320543 540 + 0.585185
c4541 Putative maturase-related proteinSubName: Full=Putative maturase-related protein; chromosome CDS4321110 522 + 0.55364
c4552 Transposase insC for insertion element IS2A/D/F/H/I/KSubName: Full=Transposase insC for insertion element IS2A/D/F/H/I/K; chromosome CDS4329034 336 + 0.514881
c4573 Putative radC-like protein yeeSSubName: Full=Putative radC-like protein yeeS; chromosome CDS4338795 447 + 0.583893
c5469 TransposaseSubName: Full=Transposase; SubName: Full=Uncharacterized protein; chromosome CDS5210429 510 + 0.460784
dam DNA adenine methylaseSubName: Full=DNA adenine methylase; EC=2.1.1.72; chromosome CDS3941130 837 - 0.491039
dbpA ATP-independent RNA helicase dbpARecName: Full=ATP-dependent RNA helicase DbpA; EC=3.6.4.13; chromosome CDS1648163 1374 + 0.517467
dcm DNA-cytosine methyltransferaseRecName: Full=Cytosine-specific methyltransferase; EC=2.1.1.37; chromosome CDS2182668 1419 - 0.51797
deaD Cold-shock DEAD-box protein ARecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; chromosome CDS3739604 1956 - 0.551125
dinG Probable ATP-dependent helicase dinGRecName: Full=Probable ATP-dependent helicase DinG; EC=3.6.4.12; AltName: Full=DNA-damage-inducible protein G; chromosome CDS855392 2151 + 0.543933
dinP DNA polymerase IVRecName: Full=DNA polymerase IV; Short=Pol IV; EC=2.7.7.7; chromosome CDS358886 1056 + 0.535985
dnaB c5026 Replicative DNA helicaseRecName: Full=Replicative DNA helicase; EC=3.6.4.12; chromosome CDS4802013 1452 + 0.527548
dnaC DNA replication protein dnaCRecName: Full=DNA replication protein DnaC; chromosome CDS5189225 738 - 0.50271
dnaE DNA polymerase III alpha subunitRecName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7; chromosome CDS215161 3483 + 0.549239
dnaG DNA primaseRecName: Full=DNA primase; EC=2.7.7.-; chromosome CDS3651701 1746 + 0.523482
dnaN DNA polymerase III, beta chainRecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; chromosome CDS4382957 1101 - 0.5495
dnaQ DNA polymerase III, epsilon chainSubName: Full=DNA polymerase III, epsilon chain; EC=2.7.7.7; chromosome CDS247681 741 + 0.507422
dnaX DNA polymerase III subunit tauSubName: Full=DNA polymerase III subunit tau; EC=2.7.7.7; chromosome CDS566742 1932 + 0.569876
endA Endonuclease I precursorSubName: Full=Endonuclease I; EC=3.1.21.1; chromosome CDS3386299 711 + 0.534459
exo Exodeoxyribonuclease IXRecName: Full=Flap endonuclease Xni; Short=FEN; EC=3.1.-.-; chromosome CDS3205782 846 + 0.523641
fimB c5391 Type 1 fimbriae Regulatory protein fimBSubName: Full=Type 1 fimbriae Regulatory protein fimB; chromosome CDS5135689 603 + 0.427861
fimE c5392 Type 1 fimbriae Regulatory protein fimERecName: Full=Type 1 fimbriae regulatory protein FimE; chromosome CDS5136769 597 + 0.472362
fis DNA-binding protein fisRecName: Full=DNA-binding protein Fis; chromosome CDS3843039 297 + 0.468013
gipA Peyer's patch-specific virulence factor GipASubName: Full=Peyers patch-specific virulence factor GipA; chromosome CDS829502 1131 + 0.5084
gyrA DNA gyrase subunit ARecName: Full=DNA gyrase subunit A; EC=5.99.1.3; chromosome CDS2623646 2628 - 0.539954
gyrB DNA gyrase subunit BRecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome CDS4379441 2418 - 0.547974
helD Helicase IVSubName: Full=Helicase IV; EC=3.6.1.-; chromosome CDS1068166 2148 + 0.522346
hepA RNA polymerase associated proteinRecName: Full=RNA polymerase-associated protein RapA; EC=3.6.4.-; AltName: Full=ATP-dependent helicase HepA; chromosome CDS62160 2907 - 0.55074
himA Integration host factor alpha-subunitRecName: Full=Integration host factor subunit alpha; Short=IHF-alpha; chromosome CDS1951220 300 - 0.5
himD Integration host factor beta-subunitRecName: Full=Integration host factor subunit beta; Short=IHF-beta; chromosome CDS1014789 285 + 0.491228
holA DNA polymerase III, delta subunitSubName: Full=DNA polymerase III, delta subunit; EC=2.7.7.7; chromosome CDS710565 1032 - 0.526163
holB DNA polymerase III, delta' subunitSubName: Full=DNA polymerase III, delta subunit; EC=2.7.7.7; chromosome CDS1299263 1005 + 0.540299
holC c5359 DNA polymerase III, chi subunitSubName: Full=DNA polymerase III, chi subunit; EC=2.7.7.7; chromosome CDS5102673 444 - 0.533784
holD DNA polymerase III, psi subunitRecName: Full=DNA polymerase III subunit psi; chromosome CDS5196724 414 + 0.584541
hrpA ATP-dependent helicase hrpASubName: Full=ATP-dependent helicase hrpA; chromosome CDS1677178 3903 + 0.537279
hrpB ATP-dependent helicase hrpBSubName: Full=ATP-dependent helicase hrpB; chromosome CDS172609 2475 + 0.564444
hupA c4957 DNA-binding protein HU-alphaRecName: Full=DNA-binding protein HU-alpha; AltName: Full=HU-2; AltName: Full=NS2; chromosome CDS4731488 273 + 0.483516
hupB DNA-binding protein HU-betaRecName: Full=DNA-binding protein HU-beta; AltName: Full=HU-1; AltName: Full=NS1; chromosome CDS535378 273 + 0.490842
insB Insertion element IS1 1/5/6 protein insBSubName: Full=Insertion element IS1 1/5/6 protein insB; chromosome CDS4290267 360 + 0.527778
insI Transposase insI for insertion sequence element IS30B/C/DSubName: Full=Transposase insI for insertion sequence element IS30B/C/D; chromosome CDS4291966 1152 - 0.458333
intC Putative prophage integraseSubName: Full=Putative prophage integrase; chromosome CDS4274702 1185 + 0.454008
intT Integrase for prophageSubName: Full=Integrase for prophage; chromosome CDS909332 1032 - 0.472868
lig DNA ligaseRecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; chromosome CDS2809040 2016 - 0.543651
mfd Transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS1315400 2856 - 0.545518
mutH DNA mismatch repair protein mutHRecName: Full=DNA mismatch repair protein MutH; AltName: Full=Methyl-directed mismatch repair protein; chromosome CDS3276983 690 + 0.536232
mutL c5254 DNA mismatch repair protein mutLRecName: Full=DNA mismatch repair protein MutL; chromosome CDS5005569 1851 + 0.559157
mutM Formamidopyrimidine-DNA glycosylaseRecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase MutM; Short=AP lyase MutM; EC=4.2.99.18; chromosome CDS4241341 810 - 0.541975
mutS DNA mismatch repair protein mutSRecName: Full=DNA mismatch repair protein MutS; chromosome CDS3138250 2562 + 0.555035
mutT Mutator mutT proteinSubName: Full=Mutator mutT protein; chromosome CDS114871 399 + 0.493734
mutY A/G-specific adenine glycosylaseSubName: Full=A/G-specific adenine glycosylase; EC=3.2.2.-; chromosome CDS3398842 1083 + 0.554017
nei Endonuclease VIIIRecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; EC=3.2.2.-; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII; chromosome CDS777002 792 + 0.526515
nfi c4955 Endonuclease VRecName: Full=Endonuclease V; EC=3.1.21.7; AltName: Full=Deoxyinosine 3endonuclease; AltName: Full=Deoxyribonuclease V; Short=DNase V; chromosome CDS4729997 672 + 0.589286
nfo Endonuclease IVRecName: Full=Probable endonuclease 4; EC=3.1.21.2; AltName: Full=Endodeoxyribonuclease IV; AltName: Full=Endonuclease IV; chromosome CDS2542533 858 + 0.522144
nohA Prophage Qin DNA packaging protein NU1 homologRecName: Full=P21 prophage-derived terminase small subunit; AltName: Full=Gp1; chromosome CDS1424932 549 + 0.499089
nohB Prophage QSR' DNA packaging protein NU1 homologSubName: Full=Prophage QSR DNA packaging protein NU1 homolog; chromosome CDS3045954 546 - 0.514652
nth Endonuclease IIIRecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; chromosome CDS1872052 636 + 0.481132
ntpA dATP pyrophosphohydrolaseSubName: Full=dATP pyrophosphohydrolase; EC=3.6.1.-; chromosome CDS2099858 444 - 0.527027
ogt Methylated-DNA--protein-cysteinemethyltransferaseRecName: Full=Methylated-DNA--protein-cysteine methyltransferase; EC=2.1.1.63; AltName: Full=6-O-methylguanine-DNA methyltransferase; AltName: Full=O-6-methylguanine-DNA-alkyltransferase; chromosome CDS1641808 516 - 0.52907
parC Topoisomerase IV subunit ARecName: Full=DNA topoisomerase 4 subunit A; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit A; chromosome CDS3593045 2259 - 0.54803
parE Topoisomerase IV subunit BRecName: Full=DNA topoisomerase 4 subunit B; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit B; chromosome CDS3610295 1893 - 0.536186
phrB Deoxyribodipyrimidine photolyaseSubName: Full=Deoxyribodipyrimidine photolyase; EC=4.1.99.3; chromosome CDS770682 1419 + 0.538407
polB DNA polymerase IIRecName: Full=DNA polymerase; EC=2.7.7.7; chromosome CDS65231 2352 - 0.554422
priA c4888 Primosomal protein N'SubName: Full=Primosomal protein N; chromosome CDS4644306 2271 - 0.566711
priC Primosomal replication protein NSubName: Full=Primosomal replication protein N; chromosome CDS564935 528 - 0.590909
radC DNA repair protein radCRecName: Full=UPF0758 protein YicR; chromosome CDS4242889 675 - 0.485926
rdgC Recombination associated protein rdgCRecName: Full=Recombination-associated protein RdgC; chromosome CDS483153 984 - 0.514228
recA RecA proteinRecName: Full=Protein RecA; AltName: Full=Recombinase A; chromosome CDS3105176 1062 - 0.538606
recB Exodeoxyribonuclease V beta chainSubName: Full=Exodeoxyribonuclease V beta chain; EC=3.1.11.5; chromosome CDS3259781 3552 - 0.540541
recC Exodeoxyribonuclease V gamma chainSubName: Full=Exodeoxyribonuclease V gamma chain; EC=3.1.11.5; chromosome CDS3266380 3369 - 0.533096
recD Exodeoxyribonuclease V alpha chainSubName: Full=Exodeoxyribonuclease V alpha chain; EC=3.1.11.5; chromosome CDS3257955 1827 - 0.551177
recF DNA replication and repair protein recFRecName: Full=DNA replication and repair protein RecF; chromosome CDS4381884 1074 - 0.549348
recG ATP-dependent DNA helicase recGSubName: Full=ATP-dependent DNA helicase recG; EC=3.6.1.-; chromosome CDS4256179 2115 + 0.569267
recJ Single-stranded-DNA-specific exonuclease recJSubName: Full=Single-stranded-DNA-specific exonuclease recJ; EC=3.1.-.-; chromosome CDS3333346 1734 - 0.563437
recN DNA repair protein recNRecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; chromosome CDS3014381 1662 + 0.519856
recO DNA repair protein recORecName: Full=DNA repair protein RecO; AltName: Full=Recombination protein O; chromosome CDS2964608 729 - 0.540466
recQ ATP-dependent DNA helicase recQSubName: Full=ATP-dependent DNA helicase recQ; EC=3.6.1.-; chromosome CDS4510278 1836 + 0.543573
recR Recombination protein recRRecName: Full=Recombination protein RecR; chromosome CDS569055 606 + 0.569307
rep ATP-dependent DNA helicase repSubName: Full=ATP-dependent DNA helicase rep; EC=3.6.1.-; chromosome CDS4460841 2022 + 0.543027
rfaP Lipopolysaccharide core biosynthesis protein rfaPSubName: Full=Lipopolysaccharide core biosynthesis protein rfaP; chromosome CDS4236156 807 - 0.478315
rhlB Putative ATP-dependent RNA helicase rhlBRecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; chromosome CDS4464529 1266 - 0.522117
rhlE Putative ATP-dependent RNA helicase rhlERecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; chromosome CDS853494 1362 + 0.563142
rnhA Ribonuclease HIRecName: Full=Ribonuclease HI; Short=RNase HI; EC=3.1.26.4; chromosome CDS247158 579 - 0.48532
rnhB Ribonuclease HIIRecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; chromosome CDS214528 597 + 0.562814
rnt Ribonuclease TRecName: Full=Ribonuclease T; EC=3.1.13.-; AltName: Full=Exoribonuclease T; Short=RNase T; chromosome CDS1888876 648 + 0.54321
rus Crossover junction endodeoxyribonuclease rusARecName: Full=Crossover junction endodeoxyribonuclease RusA; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RusA; AltName: Full=Holliday junction resolvase; chromosome CDS1418850 363 + 0.53168
ruvA Holliday junction DNA helicase ruvARecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; chromosome CDS2097042 612 - 0.534314
ruvB Holliday junction DNA helicase ruvBRecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; chromosome CDS2096023 1011 - 0.524233
ruvC Crossover junction endodeoxyribonuclease ruvCRecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; chromosome CDS2098533 525 - 0.55619
sbcB Exodeoxyribonuclease IRecName: Full=Exodeoxyribonuclease I; EC=3.1.11.1; chromosome CDS2372212 1476 + 0.501355
sbcC Exonuclease sbcCSubName: Full=Exonuclease sbcC; chromosome CDS486676 3144 - 0.538168
sbcD Nuclease sbcCD subunit DSubName: Full=Nuclease sbcCD subunit D; chromosome CDS489816 1203 - 0.528678
sbmC DNA gyrase inhibitory proteinRecName: Full=DNA gyrase inhibitor; chromosome CDS2370293 474 - 0.474684
seqA SeqA proteinRecName: Full=Negative modulator of initiation of replication; chromosome CDS755248 681 + 0.490455
smf Unknown protein fragment 1SubName: Full=Uncharacterized protein; chromosome CDS3863803 1125 - 0.506667
srmB ATP-dependent RNA helicase srmBRecName: Full=ATP-dependent RNA helicase SrmB; EC=3.6.4.13; chromosome CDS2975763 1335 + 0.546816
ssb c5049 Single-strand binding proteinRecName: Full=Single-stranded DNA-binding protein; Short=SSB; chromosome CDS4826685 537 + 0.581006
tag DNA-3-methyladenine glycosylase ISubName: Full=DNA-3-methyladenine glycosylase I; EC=3.2.2.20; chromosome CDS4151964 729 + 0.477366
topA DNA topoisomerase IRecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; chromosome CDS1575317 2640 + 0.516667
topB DNA topoisomerase IIIRecName: Full=DNA topoisomerase 3; EC=5.99.1.2; AltName: Full=DNA topoisomerase III; chromosome CDS2002243 2004 - 0.542415
umuC UmuC proteinSubName: Full=UmuC protein; chromosome CDS1468502 1269 + 0.509062
ung Uracil-DNA glycosylaseRecName: Full=Uracil-DNA glycosylase; Short=UDG; EC=3.2.2.27; chromosome CDS2979445 690 + 0.517391
uvrA c5048 Excinuclease ABC subunit ARecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; chromosome CDS4823608 2823 - 0.555438
uvrB Excinuclease ABC subunit BRecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; chromosome CDS836301 2022 + 0.530663
uvrC Excinuclease ABC subunit CRecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; chromosome CDS2141550 1833 - 0.516094
uvrD DNA helicase IISubName: Full=DNA helicase II; EC=3.6.1.-; chromosome CDS4500688 2217 + 0.572395
vsr Very short patch repair proteinSubName: Full=Very short patch repair protein; EC=3.1.-.-; chromosome CDS2182217 471 - 0.564756
wcaH GDP-mannose mannosyl hydrolaseRecName: Full=GDP-mannose mannosyl hydrolase; Short=GDPMH; EC=3.6.1.-; chromosome CDS2413279 483 - 0.550725
xerC Integrase/recombinase xerCRecName: Full=Tyrosine recombinase XerC; chromosome CDS4499046 897 + 0.540691
xerD Integrase/recombinase xerDRecName: Full=Tyrosine recombinase XerD; chromosome CDS3335820 897 - 0.532887
xseA Exodeoxyribonuclease VII large subunitRecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit; chromosome CDS2891197 1377 + 0.535948
xseB Exodeoxyribonuclease VII small subunitRecName: Full=Exodeoxyribonuclease 7 small subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit; chromosome CDS515029 243 - 0.54321
xthA Exodeoxyribonuclease IIISubName: Full=Exodeoxyribonuclease III; EC=3.1.11.2; chromosome CDS1986261 819 + 0.534799
ybaV Hypothetical protein ybaV precursorSubName: Full=Uncharacterized protein; chromosome CDS537864 372 + 0.540323
ybaZ Hypothetical protein ybaZSubName: Full=Uncharacterized protein; chromosome CDS550632 411 - 0.547445
ybjD Hypothetical protein ybjDSubName: Full=Uncharacterized protein; chromosome CDS970601 1659 + 0.532248
ycaJ Hypothetical protein ycaJRecName: Full=Replication-associated recombination protein A; chromosome CDS992176 1344 + 0.535714
ycfH Putative deoxyribonuclease ycfHRecName: Full=Uncharacterized deoxyribonuclease YcfH; EC=3.1.21.-; chromosome CDS1300218 858 + 0.512821
ydcM Hypothetical protein ydcMSubName: Full=Uncharacterized protein; chromosome CDS3640353 1206 + 0.505804
ydfP Hypothetical protein ydfP precursorSubName: Full=Uncharacterized protein; chromosome CDS3049260 498 - 0.463855
ydjQ Hypothetical protein ydjQRecName: Full=Excinuclease cho; EC=3.1.25.-; AltName: Full=Endonuclease cho; AltName: Full=UvrC homolog protein; chromosome CDS1977360 888 + 0.504505
yeaB Hypothetical protein yeaBRecName: Full=Uncharacterized Nudix hydrolase NudL; EC=3.6.1.-; chromosome CDS2047842 579 + 0.549223
yejH Hypothetical protein yejHSubName: Full=Uncharacterized protein; chromosome CDS2571169 1761 + 0.533788
yfaO Putative Nudix hydrolase yfaORecName: Full=Nucleoside triphosphatase NudI; EC=3.6.1.-; chromosome CDS2650936 426 + 0.474178
yfcD Hypothetical protein yfcDRecName: Full=Uncharacterized Nudix hydrolase YfcD; EC=3.6.-.-; chromosome CDS2701137 543 - 0.53407
yffH Hypothetical protein yffHRecName: Full=GDP-mannose pyrophosphatase NudK; EC=3.6.1.-; chromosome CDS2853669 603 - 0.487562
yfgE Hypothetical protein yfgERecName: Full=DnaA regulatory inactivator Hda; chromosome CDS2875039 747 - 0.534137
ygdP (Di)nucleoside polyphosphate hydrolaseRecName: Full=RNA pyrophosphohydrolase; EC=3.6.1.-; AltName: Full=(Di)nucleoside polyphosphate hydrolase; chromosome CDS3275768 531 - 0.491525
ygiV Hypothetical protein ygiVSubName: Full=Uncharacterized protein; chromosome CDS3597157 483 - 0.530021
ygjF G/U mismatch-specific DNA glycosylaseRecName: Full=G/U mismatch-specific DNA glycosylase; EC=3.2.2.28; AltName: Full=Double-strand-specific uracil glycosylase; AltName: Full=Mismatch-specific uracil DNA-glycosylase; Short=MUG; chromosome CDS3655562 507 - 0.536489
yhbQ Hypothetical protein yhbQRecName: Full=UPF0213 protein YhbQ; chromosome CDS3733598 303 + 0.541254
yhdJ Hypothetical adenine-specific methylase yhdJSubName: Full=Hypothetical adenine-specific methylase yhdJ; EC=2.1.1.72; chromosome CDS3843415 891 + 0.481481
yhhF Putative methylase yhhFRecName: Full=Ribosomal RNA small subunit methyltransferase D; EC=2.1.1.171; AltName: Full=16S rRNA m2G966 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase; chromosome CDS4042889 597 + 0.541039
yicF Hypothetical DNA ligase-like protein yicFRecName: Full=DNA ligase B; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)] B; chromosome CDS4250490 1689 - 0.523979
yigW c4788 Conserved hypothetical proteinRecName: Full=Tat-linked quality control protein TatD; AltName: Full=Deoxyribonuclease TatD; chromosome CDS4549394 795 + 0.545912
yjaD c4953 NADH pyrophosphataseRecName: Full=NADH pyrophosphatase; EC=3.6.1.22; chromosome CDS4728110 774 + 0.529716
yjjV Putative deoxyribonuclease yjjVSubName: Full=Putative deoxyribonuclease yjjV; EC=3.1.21.-; chromosome CDS5202402 780 + 0.544872
yqgF Hypothetical protein yqgFRecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; chromosome CDS3389455 417 + 0.53717
yqiE ADP-ribose pyrophosphataseRecName: Full=ADP-ribose pyrophosphatase; EC=3.6.1.13; AltName: Full=ADP-ribose diphosphatase; AltName: Full=ADP-ribose phosphohydrolase; Short=ASPPase; AltName: Full=Adenosine diphosphoribose pyrophosphatase; Short=ADPR-PPase; chromosome CDS3614072 630 - 0.507937
yraN Hypothetical protein yraNRecName: Full=UPF0102 protein YraN; chromosome CDS3729632 396 + 0.54798
yrdD Hypothetical protein yrdDSubName: Full=Uncharacterized protein; chromosome CDS3862787 543 - 0.497238
yrfE ADP compounds hydrolase nudESubName: Full=ADP compounds hydrolase nudE; EC=3.6.1.-; chromosome CDS3951642 561 - 0.508021