Gene list
Applied filters:
COG category: Replication, recombination and repair
Organism: Escherichia coli CFT073, CFT073
Number of genes found: 315
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Escherichia coli CFT073, CFT073 | ||||||||
---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | c5176 | Putative Transposase within prophage | chromosome | CDS | 4938378 | 783 | - | 0.510856 |
NA | c5144 | Hypothetical protein | chromosome | CDS | 4920004 | 1500 | + | 0.539333 |
NA | c5216 | Prophage P4 integrase | chromosome | CDS | 4970125 | 1263 | - | 0.490103 |
NA | c5172 | Hypothetical protein | chromosome | CDS | 4934476 | 741 | + | 0.520918 |
NA | c5178 | Putative Transposase for IS629 | chromosome | CDS | 4939758 | 888 | + | 0.545045 |
NA | c5373 | Hypothetical protein | chromosome | CDS | 5120028 | 2013 | - | 0.464481 |
NA | c5145 | Hypothetical protein | chromosome | CDS | 4921500 | 756 | + | 0.537037 |
NA | c5152 | Putative radC-like protein yeeS | chromosome | CDS | 4924822 | 477 | - | 0.587002 |
NA | c5382 | Hypothetical protein | chromosome | CDS | 5128222 | 714 | + | 0.378151 |
NA | c5383 | Hypothetical protein | chromosome | CDS | 5128919 | 672 | - | 0.433036 |
NA | c5214 | Unknown protein of IS629 encoded within prophage | chromosome | CDS | 4967544 | 327 | - | 0.535168 |
NA | c5168 | Unknown protein of IS629 encoded within prophage | chromosome | CDS | 4932812 | 327 | - | 0.535168 |
NA | c5177 | Hypothetical protein in IS | chromosome | CDS | 4939432 | 327 | + | 0.53211 |
NA | c5215 | Conserved hypothetical protein | chromosome | CDS | 4967922 | 1764 | - | 0.477891 |
NA | c5198 | Hypothetical protein | chromosome | CDS | 4953372 | 171 | + | 0.479532 |
NA | c5197 | Transposase insD for insertion element IS2A/D/F/H/I/K | chromosome | CDS | 4952728 | 648 | + | 0.529321 |
NA | c5167 | Putative Transposase for IS629 | chromosome | CDS | 4932138 | 678 | - | 0.551622 |
NA | c5175 | Hypothetical protein | chromosome | CDS | 4938218 | 132 | - | 0.439394 |
NA | c5378 | Hypothetical protein | chromosome | CDS | 5123325 | 3279 | - | 0.522415 |
NA | c5213 | Putative Transposase for IS629 | chromosome | CDS | 4966657 | 891 | - | 0.539843 |
NA | c5371 | Prophage P4 integrase | chromosome | CDS | 5115549 | 1152 | + | 0.491319 |
NA | c5384 | Hypothetical protein | chromosome | CDS | 5129587 | 393 | - | 0.445293 |
NA | c5196 | Transposase insC for insertion element IS2A/D/F/H/I/K | chromosome | CDS | 4952414 | 291 | + | 0.498282 |
NA | c5375 | Hypothetical protein | chromosome | CDS | 5122185 | 159 | - | 0.578616 |
NA | c5166 | Partial Transposase | chromosome | CDS | 4931923 | 219 | - | 0.511416 |
ada | ADA Regulatory protein | chromosome | CDS | 2596284 | 1065 | - | 0.569014 | |
alkA | DNA-3-methyladenine glycosylase II | chromosome | CDS | 2434020 | 849 | - | 0.547703 | |
alkB | Alkylated DNA repair protein alkB | chromosome | CDS | 2595634 | 651 | - | 0.53149 | |
c0002 | Hypothetical protein | chromosome | CDS | 534 | 378 | + | 0.460317 | |
c0072 | Transposase | chromosome | CDS | 67723 | 510 | + | 0.460784 | |
c0086 | Transposase | chromosome | CDS | 82026 | 510 | + | 0.462745 | |
c0118 | Hypothetical protein | chromosome | CDS | 115372 | 522 | + | 0.463602 | |
c0119 | Putative Transposase insK for insertion sequence element IS150 | chromosome | CDS | 115993 | 723 | + | 0.489627 | |
c0138 | Unknown protein of IS629 encoded within prophage | chromosome | CDS | 131044 | 327 | + | 0.535168 | |
c0139 | Putative Transposase for IS629 | chromosome | CDS | 131367 | 891 | + | 0.542088 | |
c0198 | Transposase | chromosome | CDS | 192782 | 510 | + | 0.462745 | |
c0232 | Putative Transposase insK for insertion sequence element IS150 | chromosome | CDS | 226161 | 723 | - | 0.489627 | |
c0233 | Hypothetical protein | chromosome | CDS | 226983 | 531 | - | 0.463277 | |
c0256 | Hypothetical protein | chromosome | CDS | 249923 | 222 | + | 0.441441 | |
c0257 | Unknown in ISEc8 | chromosome | CDS | 250214 | 351 | + | 0.532764 | |
c0258 | Unknown in ISEc8 | chromosome | CDS | 250595 | 648 | + | 0.54784 | |
c0259 | Hypothetical protein | chromosome | CDS | 251193 | 951 | + | 0.521556 | |
c0261 | Hypothetical protein | chromosome | CDS | 252253 | 1134 | - | 0.461199 | |
c0262 | Hypothetical protein | chromosome | CDS | 253450 | 186 | + | 0.564516 | |
c0263 | Putative Transposase | chromosome | CDS | 253783 | 687 | + | 0.54294 | |
c0264 | Hypothetical protein | chromosome | CDS | 254517 | 255 | + | 0.490196 | |
c0268 | Hypothetical protein | chromosome | CDS | 256927 | 756 | + | 0.537037 | |
c0273 | Putative radC-like protein yeeS | chromosome | CDS | 259552 | 492 | - | 0.577236 | |
c0291 | Hypothetical protein | chromosome | CDS | 271030 | 609 | + | 0.428571 | |
c0349 | Putative Transposase within prophage | chromosome | CDS | 324082 | 1125 | + | 0.507556 | |
c0352 | Partial Transposase | chromosome | CDS | 331417 | 207 | - | 0.502415 | |
c0354 | Unknown protein of IS629 encoded within prophage | chromosome | CDS | 332304 | 327 | - | 0.535168 | |
c0355 | Hypothetical protein | chromosome | CDS | 333750 | 297 | + | 0.521886 | |
c0357 | Hypothetical protein | chromosome | CDS | 334492 | 384 | + | 0.479167 | |
c0364 | Hypothetical protein | chromosome | CDS | 345925 | 483 | + | 0.283644 | |
c0366 | Hypothetical protein | chromosome | CDS | 346889 | 270 | - | 0.388889 | |
c0367 | Hypothetical protein | chromosome | CDS | 347299 | 477 | - | 0.433962 | |
c0391 | CP4-like integrase | chromosome | CDS | 370454 | 339 | + | 0.457227 | |
c0396 | Insertion element IS1 1/2/3/5/6 protein insA | chromosome | CDS | 376600 | 216 | + | 0.472222 | |
c0397 | InsB protein | chromosome | CDS | 377117 | 177 | + | 0.474576 | |
c0430 | Type 1 fimbriae Regulatory protein fimB | chromosome | CDS | 414420 | 603 | - | 0.422886 | |
c0563 | Hypothetical protein | chromosome | CDS | 542302 | 510 | + | 0.460784 | |
c0767 | Hypothetical protein | chromosome | CDS | 749807 | 459 | + | 0.457516 | |
c0941 | DNA adenine methylase | chromosome | CDS | 914250 | 858 | + | 0.4662 | |
c1165 | Putative P4-family integrase | chromosome | CDS | 1127702 | 1203 | + | 0.487116 | |
c1168 | Unknown in IS1N | chromosome | CDS | 1131407 | 393 | + | 0.470738 | |
c1213 | Hypothetical protein | chromosome | CDS | 1167823 | 564 | + | 0.558511 | |
c1218 | Hypothetical protein | chromosome | CDS | 1170358 | 504 | - | 0.496032 | |
c1219 | Putative Transposase | chromosome | CDS | 1170833 | 750 | - | 0.534667 | |
c1224 | Transposase insF for insertion sequence IS3A/B/C/D/E/fA | chromosome | CDS | 1174628 | 753 | - | 0.568393 | |
c1225 | Transposase insE for insertion sequence IS3A/B/C/D/E/fA/fB | chromosome | CDS | 1175364 | 225 | - | 0.506667 | |
c1248 | Hypothetical protein | chromosome | CDS | 1196895 | 1038 | - | 0.442197 | |
c1256 | Hypothetical protein | chromosome | CDS | 1208636 | 510 | + | 0.460784 | |
c1262 | Putative Transposase for IS629 | chromosome | CDS | 1212504 | 891 | - | 0.542088 | |
c1263 | Unknown protein of IS629 encoded within prophage | chromosome | CDS | 1213391 | 327 | - | 0.535168 | |
c1268 | Hypothetical protein | chromosome | CDS | 1218879 | 183 | - | 0.557377 | |
c1282 | Putative radC-like protein yeeS | chromosome | CDS | 1233881 | 477 | + | 0.580713 | |
c1291 | Hypothetical protein | chromosome | CDS | 1239426 | 510 | + | 0.462745 | |
c1384 | Hypothetical protein | chromosome | CDS | 1311803 | 510 | + | 0.462745 | |
c1400 | Prophage lambda integrase | chromosome | CDS | 1328014 | 1119 | - | 0.452189 | |
c1425 | Hypothetical protein | chromosome | CDS | 1340428 | 186 | + | 0.510753 | |
c1427 | Hypothetical protein | chromosome | CDS | 1341649 | 510 | + | 0.460784 | |
c1444 | Prophage Qin DNA packaging protein NU1 homolog | chromosome | CDS | 1348728 | 510 | + | 0.468627 | |
c1452 | Hypothetical protein | chromosome | CDS | 1355885 | 432 | + | 0.560185 | |
c1483 | Putative integrase of prophage | chromosome | CDS | 1378215 | 945 | + | 0.508995 | |
c1497 | Putative single stranded DNA-binding protein of prophage | chromosome | CDS | 1384538 | 411 | + | 0.574209 | |
c1513 | Putative Nudix hydrolase ymfB | chromosome | CDS | 1394721 | 462 | - | 0.512987 | |
c1519 | Prophage lambda integrase | chromosome | CDS | 1397370 | 1143 | - | 0.433946 | |
c1520 | Unknown protein of IS629 encoded within prophage | chromosome | CDS | 1398656 | 327 | + | 0.535168 | |
c1521 | Putative Transposase for IS629 | chromosome | CDS | 1398979 | 891 | + | 0.542088 | |
c1529 | Hypothetical protein | chromosome | CDS | 1402870 | 756 | - | 0.537037 | |
c1530 | Hypothetical protein | chromosome | CDS | 1403622 | 1500 | - | 0.539333 | |
c1552 | Unknown protein of IS629 encoded within prophage | chromosome | CDS | 1415867 | 327 | + | 0.535168 | |
c1553 | Putative Transposase for IS629 | chromosome | CDS | 1416190 | 891 | + | 0.542088 | |
c1593 | Hypothetical protein | chromosome | CDS | 1445744 | 291 | + | 0.395189 | |
c1738 | Hypothetical protein | chromosome | CDS | 1574161 | 459 | + | 0.459695 | |
c1819 | Putative conserved protein | chromosome | CDS | 1650652 | 309 | - | 0.508091 | |
c1893 | Hypothetical protein | chromosome | CDS | 1727294 | 144 | + | 0.354167 | |
c2160 | CTP pyrophosphohydrolase | chromosome | CDS | 1995334 | 408 | + | 0.54902 | |
c2212 | Probable ATP-dependent helicase yoaA | chromosome | CDS | 2042997 | 1911 | - | 0.55573 | |
c2254 | Exodeoxyribonuclease X | chromosome | CDS | 2077743 | 717 | + | 0.516039 | |
c2257 | Hypothetical protein | chromosome | CDS | 2080602 | 603 | + | 0.515755 | |
c2334 | Transposase | chromosome | CDS | 2148324 | 510 | - | 0.460784 | |
c2392 | Putative P4-family integrase | chromosome | CDS | 2194512 | 1221 | + | 0.487305 | |
c2405 | Hypothetical protein | chromosome | CDS | 2207572 | 1182 | - | 0.334179 | |
c2418 | Prophage P4 integrase | chromosome | CDS | 2218378 | 1044 | + | 0.528736 | |
c2425 | Hypothetical protein | chromosome | CDS | 2231467 | 378 | - | 0.460317 | |
c2449 | Prophage P4 integrase | chromosome | CDS | 2262986 | 1272 | + | 0.513365 | |
c2472 | Transposase | chromosome | CDS | 2315404 | 267 | + | 0.47191 | |
c2473 | Transposase | chromosome | CDS | 2315775 | 480 | + | 0.475 | |
c2474 | Transposase | chromosome | CDS | 2316245 | 228 | + | 0.45614 | |
c2496 | Hypothetical protein | chromosome | CDS | 2336398 | 162 | - | 0.506173 | |
c2497 | Transposase | chromosome | CDS | 2336638 | 858 | - | 0.505827 | |
c2503 | Transposase | chromosome | CDS | 2341416 | 1197 | + | 0.577277 | |
c2509 | Insertion sequence ATP-binding protein | chromosome | CDS | 2344917 | 756 | + | 0.537037 | |
c2511 | Insertion sequence ATP-binding protein | chromosome | CDS | 2347151 | 783 | - | 0.500639 | |
c2512 | Transposase | chromosome | CDS | 2347930 | 1023 | - | 0.527859 | |
c2529 | Putative radC-like protein yeeS | chromosome | CDS | 2365806 | 447 | + | 0.579418 | |
c2622 | Transposase | chromosome | CDS | 2467471 | 510 | - | 0.462745 | |
c2639 | Transposase | chromosome | CDS | 2483231 | 510 | - | 0.460784 | |
c2897 | Type 1 fimbriae Regulatory protein fimB | chromosome | CDS | 2756729 | 630 | - | 0.349206 | |
c2898 | Type 1 fimbriae Regulatory protein fimB | chromosome | CDS | 2758106 | 570 | + | 0.331579 | |
c3146 | Putative DNA-invertase from lambdoid prophage Rac | chromosome | CDS | 3021386 | 591 | + | 0.446701 | |
c3152 | Hypothetical protein | chromosome | CDS | 3026388 | 510 | - | 0.462745 | |
c3189 | Hypothetical protein | chromosome | CDS | 3055857 | 390 | - | 0.566667 | |
c3204 | Hypothetical protein | chromosome | CDS | 3064143 | 1173 | + | 0.436488 | |
c3206 | Hypothetical protein | chromosome | CDS | 3065702 | 816 | - | 0.393382 | |
c3432 | Transposase | chromosome | CDS | 3283735 | 339 | - | 0.466077 | |
c3468 | Hypothetical protein | chromosome | CDS | 3329981 | 510 | - | 0.460784 | |
c3556 | Prophage P4 integrase | chromosome | CDS | 3406498 | 1266 | + | 0.485782 | |
c3560 | Unknown protein encoded by ISEc8 within prophage | chromosome | CDS | 3410473 | 405 | + | 0.493827 | |
c3561 | Unknown protein encoded by ISEc8 | chromosome | CDS | 3410874 | 348 | + | 0.568965 | |
c3562 | Hypothetical protein | chromosome | CDS | 3411270 | 408 | + | 0.588235 | |
c3563 | Unknown protein encoded by ISEc8 within prophage | chromosome | CDS | 3411690 | 1119 | + | 0.602324 | |
c3575 | Transposase insF for insertion sequence IS3A/B/C/D/E/fA | chromosome | CDS | 3425931 | 819 | - | 0.507937 | |
c3576 | Unknown in IS | chromosome | CDS | 3426785 | 303 | - | 0.462046 | |
c3577 | Unknown protein encoded by ISEc8 within prophage | chromosome | CDS | 3427169 | 402 | + | 0.517413 | |
c3578 | Unknown protein encoded by ISEc8 within prophage | chromosome | CDS | 3427567 | 348 | + | 0.586207 | |
c3580 | Hypothetical protein | chromosome | CDS | 3427964 | 393 | + | 0.56743 | |
c3594 | Putative Transposase | chromosome | CDS | 3439254 | 519 | - | 0.522158 | |
c3595 | Transposase | chromosome | CDS | 3439784 | 357 | - | 0.54902 | |
c3596 | Hypothetical protein in IS | chromosome | CDS | 3440140 | 327 | - | 0.529052 | |
c3597 | Transposase | chromosome | CDS | 3441312 | 591 | - | 0.529611 | |
c3607 | Hypothetical protein | chromosome | CDS | 3445858 | 1500 | + | 0.539333 | |
c3608 | Hypothetical protein | chromosome | CDS | 3447354 | 756 | + | 0.537037 | |
c3611 | Transposase insD for insertion element IS2A/D/F/H/I/K | chromosome | CDS | 3451366 | 906 | - | 0.550773 | |
c3612 | Transposase insC for insertion element IS2A/D/F/H/I/K | chromosome | CDS | 3452264 | 375 | - | 0.482667 | |
c3613 | Hypothetical protein | chromosome | CDS | 3452810 | 159 | + | 0.509434 | |
c3614 | Hypothetical protein | chromosome | CDS | 3452972 | 186 | - | 0.548387 | |
c3615 | Unknown in ISEc8 | chromosome | CDS | 3453103 | 1482 | - | 0.549933 | |
c3616 | Unknown in ISEc8 | chromosome | CDS | 3454615 | 351 | - | 0.524217 | |
c3617 | Unknown in putative ISEc8 | chromosome | CDS | 3454962 | 438 | - | 0.490868 | |
c3640 | Unknown in ISEc8 | chromosome | CDS | 3480253 | 363 | + | 0.512397 | |
c3641 | Unknown in ISEc8 | chromosome | CDS | 3480612 | 351 | + | 0.529915 | |
c3643 | Unknown in ISEc8 | chromosome | CDS | 3480993 | 1101 | + | 0.552225 | |
c3645 | Unknown protein encoded by ISEc8 within prophage | chromosome | CDS | 3482090 | 1539 | + | 0.595192 | |
c3657 | Unknown in ISEc8 | chromosome | CDS | 3495431 | 393 | + | 0.531807 | |
c3658 | Hypothetical protein | chromosome | CDS | 3495830 | 1602 | + | 0.548065 | |
c3659 | Unknown protein encoded by ISEc8 | chromosome | CDS | 3497824 | 648 | + | 0.540123 | |
c3660 | Unknown protein encoded by ISEc8 | chromosome | CDS | 3498471 | 348 | + | 0.551724 | |
c3662 | Unknown protein encoded by ISEc8 | chromosome | CDS | 3498838 | 1104 | + | 0.57337 | |
c3663 | Hypothetical protein | chromosome | CDS | 3500024 | 381 | + | 0.530184 | |
c3671 | Putative radC-like protein yeeS | chromosome | CDS | 3505352 | 492 | + | 0.583333 | |
c3684 | Hypothetical protein | chromosome | CDS | 3511126 | 156 | + | 0.480769 | |
c3703 | Transposase insG for insertion sequence element IS4 | chromosome | CDS | 3532771 | 1350 | - | 0.536296 | |
c3803 | Putative Transposase | chromosome | CDS | 3639888 | 453 | - | 0.461369 | |
c4010 | Hypothetical protein | chromosome | CDS | 3827694 | 165 | + | 0.406061 | |
c4222 | Putative DNA processing protein | chromosome | CDS | 4011694 | 1296 | - | 0.506173 | |
c4223 | Putative conserved protein | chromosome | CDS | 4012896 | 2100 | - | 0.493333 | |
c4503 | Insertion element IS1 1/2/3/5/6 protein insA | chromosome | CDS | 4289968 | 273 | + | 0.479853 | |
c4507 | Transposase insF for insertion sequence IS3A/B/C/D/E/fA | chromosome | CDS | 4293266 | 813 | + | 0.504305 | |
c4508 | Conserved hypothetical protein | chromosome | CDS | 4294099 | 186 | + | 0.553763 | |
c4511 | Hypothetical protein | chromosome | CDS | 4296883 | 726 | - | 0.431129 | |
c4513 | Hypothetical protein | chromosome | CDS | 4298906 | 753 | - | 0.466135 | |
c4540 | Putative maturase-related protein | chromosome | CDS | 4320543 | 540 | + | 0.585185 | |
c4541 | Putative maturase-related protein | chromosome | CDS | 4321110 | 522 | + | 0.55364 | |
c4552 | Transposase insC for insertion element IS2A/D/F/H/I/K | chromosome | CDS | 4329034 | 336 | + | 0.514881 | |
c4573 | Putative radC-like protein yeeS | chromosome | CDS | 4338795 | 447 | + | 0.583893 | |
c5469 | Transposase | chromosome | CDS | 5210429 | 510 | + | 0.460784 | |
dam | DNA adenine methylase | chromosome | CDS | 3941130 | 837 | - | 0.491039 | |
dbpA | ATP-independent RNA helicase dbpA | chromosome | CDS | 1648163 | 1374 | + | 0.517467 | |
dcm | DNA-cytosine methyltransferase | chromosome | CDS | 2182668 | 1419 | - | 0.51797 | |
deaD | Cold-shock DEAD-box protein A | chromosome | CDS | 3739604 | 1956 | - | 0.551125 | |
dinG | Probable ATP-dependent helicase dinG | chromosome | CDS | 855392 | 2151 | + | 0.543933 | |
dinP | DNA polymerase IV | chromosome | CDS | 358886 | 1056 | + | 0.535985 | |
dnaB | c5026 | Replicative DNA helicase | chromosome | CDS | 4802013 | 1452 | + | 0.527548 |
dnaC | DNA replication protein dnaC | chromosome | CDS | 5189225 | 738 | - | 0.50271 | |
dnaE | DNA polymerase III alpha subunit | chromosome | CDS | 215161 | 3483 | + | 0.549239 | |
dnaG | DNA primase | chromosome | CDS | 3651701 | 1746 | + | 0.523482 | |
dnaN | DNA polymerase III, beta chain | chromosome | CDS | 4382957 | 1101 | - | 0.5495 | |
dnaQ | DNA polymerase III, epsilon chain | chromosome | CDS | 247681 | 741 | + | 0.507422 | |
dnaX | DNA polymerase III subunit tau | chromosome | CDS | 566742 | 1932 | + | 0.569876 | |
endA | Endonuclease I precursor | chromosome | CDS | 3386299 | 711 | + | 0.534459 | |
exo | Exodeoxyribonuclease IX | chromosome | CDS | 3205782 | 846 | + | 0.523641 | |
fimB | c5391 | Type 1 fimbriae Regulatory protein fimB | chromosome | CDS | 5135689 | 603 | + | 0.427861 |
fimE | c5392 | Type 1 fimbriae Regulatory protein fimE | chromosome | CDS | 5136769 | 597 | + | 0.472362 |
fis | DNA-binding protein fis | chromosome | CDS | 3843039 | 297 | + | 0.468013 | |
gipA | Peyer's patch-specific virulence factor GipA | chromosome | CDS | 829502 | 1131 | + | 0.5084 | |
gyrA | DNA gyrase subunit A | chromosome | CDS | 2623646 | 2628 | - | 0.539954 | |
gyrB | DNA gyrase subunit B | chromosome | CDS | 4379441 | 2418 | - | 0.547974 | |
helD | Helicase IV | chromosome | CDS | 1068166 | 2148 | + | 0.522346 | |
hepA | RNA polymerase associated protein | chromosome | CDS | 62160 | 2907 | - | 0.55074 | |
himA | Integration host factor alpha-subunit | chromosome | CDS | 1951220 | 300 | - | 0.5 | |
himD | Integration host factor beta-subunit | chromosome | CDS | 1014789 | 285 | + | 0.491228 | |
holA | DNA polymerase III, delta subunit | chromosome | CDS | 710565 | 1032 | - | 0.526163 | |
holB | DNA polymerase III, delta' subunit | chromosome | CDS | 1299263 | 1005 | + | 0.540299 | |
holC | c5359 | DNA polymerase III, chi subunit | chromosome | CDS | 5102673 | 444 | - | 0.533784 |
holD | DNA polymerase III, psi subunit | chromosome | CDS | 5196724 | 414 | + | 0.584541 | |
hrpA | ATP-dependent helicase hrpA | chromosome | CDS | 1677178 | 3903 | + | 0.537279 | |
hrpB | ATP-dependent helicase hrpB | chromosome | CDS | 172609 | 2475 | + | 0.564444 | |
hupA | c4957 | DNA-binding protein HU-alpha | chromosome | CDS | 4731488 | 273 | + | 0.483516 |
hupB | DNA-binding protein HU-beta | chromosome | CDS | 535378 | 273 | + | 0.490842 | |
insB | Insertion element IS1 1/5/6 protein insB | chromosome | CDS | 4290267 | 360 | + | 0.527778 | |
insI | Transposase insI for insertion sequence element IS30B/C/D | chromosome | CDS | 4291966 | 1152 | - | 0.458333 | |
intC | Putative prophage integrase | chromosome | CDS | 4274702 | 1185 | + | 0.454008 | |
intT | Integrase for prophage | chromosome | CDS | 909332 | 1032 | - | 0.472868 | |
lig | DNA ligase | chromosome | CDS | 2809040 | 2016 | - | 0.543651 | |
mfd | Transcription-repair coupling factor | chromosome | CDS | 1315400 | 2856 | - | 0.545518 | |
mutH | DNA mismatch repair protein mutH | chromosome | CDS | 3276983 | 690 | + | 0.536232 | |
mutL | c5254 | DNA mismatch repair protein mutL | chromosome | CDS | 5005569 | 1851 | + | 0.559157 |
mutM | Formamidopyrimidine-DNA glycosylase | chromosome | CDS | 4241341 | 810 | - | 0.541975 | |
mutS | DNA mismatch repair protein mutS | chromosome | CDS | 3138250 | 2562 | + | 0.555035 | |
mutT | Mutator mutT protein | chromosome | CDS | 114871 | 399 | + | 0.493734 | |
mutY | A/G-specific adenine glycosylase | chromosome | CDS | 3398842 | 1083 | + | 0.554017 | |
nei | Endonuclease VIII | chromosome | CDS | 777002 | 792 | + | 0.526515 | |
nfi | c4955 | Endonuclease V | chromosome | CDS | 4729997 | 672 | + | 0.589286 |
nfo | Endonuclease IV | chromosome | CDS | 2542533 | 858 | + | 0.522144 | |
nohA | Prophage Qin DNA packaging protein NU1 homolog | chromosome | CDS | 1424932 | 549 | + | 0.499089 | |
nohB | Prophage QSR' DNA packaging protein NU1 homolog | chromosome | CDS | 3045954 | 546 | - | 0.514652 | |
nth | Endonuclease III | chromosome | CDS | 1872052 | 636 | + | 0.481132 | |
ntpA | dATP pyrophosphohydrolase | chromosome | CDS | 2099858 | 444 | - | 0.527027 | |
ogt | Methylated-DNA--protein-cysteinemethyltransferase | chromosome | CDS | 1641808 | 516 | - | 0.52907 | |
parC | Topoisomerase IV subunit A | chromosome | CDS | 3593045 | 2259 | - | 0.54803 | |
parE | Topoisomerase IV subunit B | chromosome | CDS | 3610295 | 1893 | - | 0.536186 | |
phrB | Deoxyribodipyrimidine photolyase | chromosome | CDS | 770682 | 1419 | + | 0.538407 | |
polB | DNA polymerase II | chromosome | CDS | 65231 | 2352 | - | 0.554422 | |
priA | c4888 | Primosomal protein N' | chromosome | CDS | 4644306 | 2271 | - | 0.566711 |
priC | Primosomal replication protein N | chromosome | CDS | 564935 | 528 | - | 0.590909 | |
radC | DNA repair protein radC | chromosome | CDS | 4242889 | 675 | - | 0.485926 | |
rdgC | Recombination associated protein rdgC | chromosome | CDS | 483153 | 984 | - | 0.514228 | |
recA | RecA protein | chromosome | CDS | 3105176 | 1062 | - | 0.538606 | |
recB | Exodeoxyribonuclease V beta chain | chromosome | CDS | 3259781 | 3552 | - | 0.540541 | |
recC | Exodeoxyribonuclease V gamma chain | chromosome | CDS | 3266380 | 3369 | - | 0.533096 | |
recD | Exodeoxyribonuclease V alpha chain | chromosome | CDS | 3257955 | 1827 | - | 0.551177 | |
recF | DNA replication and repair protein recF | chromosome | CDS | 4381884 | 1074 | - | 0.549348 | |
recG | ATP-dependent DNA helicase recG | chromosome | CDS | 4256179 | 2115 | + | 0.569267 | |
recJ | Single-stranded-DNA-specific exonuclease recJ | chromosome | CDS | 3333346 | 1734 | - | 0.563437 | |
recN | DNA repair protein recN | chromosome | CDS | 3014381 | 1662 | + | 0.519856 | |
recO | DNA repair protein recO | chromosome | CDS | 2964608 | 729 | - | 0.540466 | |
recQ | ATP-dependent DNA helicase recQ | chromosome | CDS | 4510278 | 1836 | + | 0.543573 | |
recR | Recombination protein recR | chromosome | CDS | 569055 | 606 | + | 0.569307 | |
rep | ATP-dependent DNA helicase rep | chromosome | CDS | 4460841 | 2022 | + | 0.543027 | |
rfaP | Lipopolysaccharide core biosynthesis protein rfaP | chromosome | CDS | 4236156 | 807 | - | 0.478315 | |
rhlB | Putative ATP-dependent RNA helicase rhlB | chromosome | CDS | 4464529 | 1266 | - | 0.522117 | |
rhlE | Putative ATP-dependent RNA helicase rhlE | chromosome | CDS | 853494 | 1362 | + | 0.563142 | |
rnhA | Ribonuclease HI | chromosome | CDS | 247158 | 579 | - | 0.48532 | |
rnhB | Ribonuclease HII | chromosome | CDS | 214528 | 597 | + | 0.562814 | |
rnt | Ribonuclease T | chromosome | CDS | 1888876 | 648 | + | 0.54321 | |
rus | Crossover junction endodeoxyribonuclease rusA | chromosome | CDS | 1418850 | 363 | + | 0.53168 | |
ruvA | Holliday junction DNA helicase ruvA | chromosome | CDS | 2097042 | 612 | - | 0.534314 | |
ruvB | Holliday junction DNA helicase ruvB | chromosome | CDS | 2096023 | 1011 | - | 0.524233 | |
ruvC | Crossover junction endodeoxyribonuclease ruvC | chromosome | CDS | 2098533 | 525 | - | 0.55619 | |
sbcB | Exodeoxyribonuclease I | chromosome | CDS | 2372212 | 1476 | + | 0.501355 | |
sbcC | Exonuclease sbcC | chromosome | CDS | 486676 | 3144 | - | 0.538168 | |
sbcD | Nuclease sbcCD subunit D | chromosome | CDS | 489816 | 1203 | - | 0.528678 | |
sbmC | DNA gyrase inhibitory protein | chromosome | CDS | 2370293 | 474 | - | 0.474684 | |
seqA | SeqA protein | chromosome | CDS | 755248 | 681 | + | 0.490455 | |
smf | Unknown protein fragment 1 | chromosome | CDS | 3863803 | 1125 | - | 0.506667 | |
srmB | ATP-dependent RNA helicase srmB | chromosome | CDS | 2975763 | 1335 | + | 0.546816 | |
ssb | c5049 | Single-strand binding protein | chromosome | CDS | 4826685 | 537 | + | 0.581006 |
tag | DNA-3-methyladenine glycosylase I | chromosome | CDS | 4151964 | 729 | + | 0.477366 | |
topA | DNA topoisomerase I | chromosome | CDS | 1575317 | 2640 | + | 0.516667 | |
topB | DNA topoisomerase III | chromosome | CDS | 2002243 | 2004 | - | 0.542415 | |
umuC | UmuC protein | chromosome | CDS | 1468502 | 1269 | + | 0.509062 | |
ung | Uracil-DNA glycosylase | chromosome | CDS | 2979445 | 690 | + | 0.517391 | |
uvrA | c5048 | Excinuclease ABC subunit A | chromosome | CDS | 4823608 | 2823 | - | 0.555438 |
uvrB | Excinuclease ABC subunit B | chromosome | CDS | 836301 | 2022 | + | 0.530663 | |
uvrC | Excinuclease ABC subunit C | chromosome | CDS | 2141550 | 1833 | - | 0.516094 | |
uvrD | DNA helicase II | chromosome | CDS | 4500688 | 2217 | + | 0.572395 | |
vsr | Very short patch repair protein | chromosome | CDS | 2182217 | 471 | - | 0.564756 | |
wcaH | GDP-mannose mannosyl hydrolase | chromosome | CDS | 2413279 | 483 | - | 0.550725 | |
xerC | Integrase/recombinase xerC | chromosome | CDS | 4499046 | 897 | + | 0.540691 | |
xerD | Integrase/recombinase xerD | chromosome | CDS | 3335820 | 897 | - | 0.532887 | |
xseA | Exodeoxyribonuclease VII large subunit | chromosome | CDS | 2891197 | 1377 | + | 0.535948 | |
xseB | Exodeoxyribonuclease VII small subunit | chromosome | CDS | 515029 | 243 | - | 0.54321 | |
xthA | Exodeoxyribonuclease III | chromosome | CDS | 1986261 | 819 | + | 0.534799 | |
ybaV | Hypothetical protein ybaV precursor | chromosome | CDS | 537864 | 372 | + | 0.540323 | |
ybaZ | Hypothetical protein ybaZ | chromosome | CDS | 550632 | 411 | - | 0.547445 | |
ybjD | Hypothetical protein ybjD | chromosome | CDS | 970601 | 1659 | + | 0.532248 | |
ycaJ | Hypothetical protein ycaJ | chromosome | CDS | 992176 | 1344 | + | 0.535714 | |
ycfH | Putative deoxyribonuclease ycfH | chromosome | CDS | 1300218 | 858 | + | 0.512821 | |
ydcM | Hypothetical protein ydcM | chromosome | CDS | 3640353 | 1206 | + | 0.505804 | |
ydfP | Hypothetical protein ydfP precursor | chromosome | CDS | 3049260 | 498 | - | 0.463855 | |
ydjQ | Hypothetical protein ydjQ | chromosome | CDS | 1977360 | 888 | + | 0.504505 | |
yeaB | Hypothetical protein yeaB | chromosome | CDS | 2047842 | 579 | + | 0.549223 | |
yejH | Hypothetical protein yejH | chromosome | CDS | 2571169 | 1761 | + | 0.533788 | |
yfaO | Putative Nudix hydrolase yfaO | chromosome | CDS | 2650936 | 426 | + | 0.474178 | |
yfcD | Hypothetical protein yfcD | chromosome | CDS | 2701137 | 543 | - | 0.53407 | |
yffH | Hypothetical protein yffH | chromosome | CDS | 2853669 | 603 | - | 0.487562 | |
yfgE | Hypothetical protein yfgE | chromosome | CDS | 2875039 | 747 | - | 0.534137 | |
ygdP | (Di)nucleoside polyphosphate hydrolase | chromosome | CDS | 3275768 | 531 | - | 0.491525 | |
ygiV | Hypothetical protein ygiV | chromosome | CDS | 3597157 | 483 | - | 0.530021 | |
ygjF | G/U mismatch-specific DNA glycosylase | chromosome | CDS | 3655562 | 507 | - | 0.536489 | |
yhbQ | Hypothetical protein yhbQ | chromosome | CDS | 3733598 | 303 | + | 0.541254 | |
yhdJ | Hypothetical adenine-specific methylase yhdJ | chromosome | CDS | 3843415 | 891 | + | 0.481481 | |
yhhF | Putative methylase yhhF | chromosome | CDS | 4042889 | 597 | + | 0.541039 | |
yicF | Hypothetical DNA ligase-like protein yicF | chromosome | CDS | 4250490 | 1689 | - | 0.523979 | |
yigW | c4788 | Conserved hypothetical protein | chromosome | CDS | 4549394 | 795 | + | 0.545912 |
yjaD | c4953 | NADH pyrophosphatase | chromosome | CDS | 4728110 | 774 | + | 0.529716 |
yjjV | Putative deoxyribonuclease yjjV | chromosome | CDS | 5202402 | 780 | + | 0.544872 | |
yqgF | Hypothetical protein yqgF | chromosome | CDS | 3389455 | 417 | + | 0.53717 | |
yqiE | ADP-ribose pyrophosphatase | chromosome | CDS | 3614072 | 630 | - | 0.507937 | |
yraN | Hypothetical protein yraN | chromosome | CDS | 3729632 | 396 | + | 0.54798 | |
yrdD | Hypothetical protein yrdD | chromosome | CDS | 3862787 | 543 | - | 0.497238 | |
yrfE | ADP compounds hydrolase nudE | chromosome | CDS | 3951642 | 561 | - | 0.508021 |