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2024-05-19 09:35:57

Gene list

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COG category: Replication, recombination and repair
Organism: Buchnera aphidicola str. Sg (Schizaphis graminum), Sg

Number of genes found: 36

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Buchnera aphidicola str. Sg (Schizaphis graminum), Sg
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
deaD ATP-dependent RNA helicase DEADRecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; chromosome CDS409915 1806 - 0.316722
dnaA chromosomal replication initiator proteinRecName: Full=Chromosomal replication initiator protein DnaA; chromosome CDS12397 1365 - 0.302564
dnaB replicative DNA helicaseRecName: Full=Replicative DNA helicase; EC=3.6.4.12; chromosome CDS583185 1398 + 0.307582
dnaC DNA replication protein DnaCRecName: Full=DNA replication protein DnaC; chromosome CDS22015 741 - 0.296896
dnaE DNA polymerase III alpha chainRecName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7; chromosome CDS264635 3486 + 0.255881
dnaG DNA primaseRecName: Full=DNA primase; EC=2.7.7.-; chromosome CDS61015 1740 - 0.235632
dnaN DNA polymerase III beta chainRecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; chromosome CDS11292 1101 - 0.216167
dnaQ DNA polymerase III epsilon chainRecName: Full=DNA polymerase III subunit epsilon; EC=2.7.7.7; chromosome CDS278600 705 + 0.214184
dnaX DNA polymerase III subunit tauRecName: Full=DNA polymerase III subunit gamma; EC=2.7.7.7; chromosome CDS532404 1092 + 0.25
fis factor-for-inversion stimulation proteinRecName: Full=DNA-binding protein Fis; chromosome CDS437843 300 - 0.276667
gyrA DNA gyrase subunit ARecName: Full=DNA gyrase subunit A; EC=5.99.1.3; chromosome CDS196355 2478 - 0.293382
gyrB DNA gyrase subunit BRecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome CDS8726 2412 - 0.261609
himA integration host factor Alpha-subunitRecName: Full=Integration host factor subunit alpha; Short=IHF-alpha; chromosome CDS137640 303 + 0.260726
himD integration host factor beta subunitRecName: Full=Integration host factor subunit beta; Short=IHF-beta; chromosome CDS341617 282 - 0.297872
holA DNA polymerase III delta subunitRecName: Full=DNA polymerase III subunit delta; EC=2.7.7.7; chromosome CDS487834 1017 + 0.181908
holB DNA polymerase III delta' subunitRecName: Full=DNA polymerase III subunit delta; EC=2.7.7.7; chromosome CDS387723 987 + 0.237082
hupA DNA-binding protein hu-alphaRecName: Full=DNA-binding protein HU; chromosome CDS35721 273 - 0.263736
mutL DNA mismatch repair protein MutLRecName: Full=DNA mismatch repair protein MutL; chromosome CDS603477 1749 - 0.212121
mutS DNA mismatch repair protein MutSRecName: Full=DNA mismatch repair protein MutS; chromosome CDS467567 2418 - 0.260546
mutT mutator MutTRecName: Full=8-oxo-dGTP diphosphatase; Short=8-oxo-dGTPase; EC=3.6.1.55; AltName: Full=7,8-dihydro-8-oxoguanine-triphosphatase; AltName: Full=Mutator protein MutT; AltName: Full=dGTP pyrophosphohydrolase; chromosome CDS222237 393 + 0.208651
mutY A/G-specific adenine glycosylaseRecName: Full=A/G-specific adenine glycosylase; EC=3.2.2.-; chromosome CDS588846 1044 + 0.224138
nfo endonuclease IVRecName: Full=Probable endonuclease 4; EC=3.1.21.2; AltName: Full=Endodeoxyribonuclease IV; AltName: Full=Endonuclease IV; chromosome CDS144620 840 + 0.260714
nth endonuclease IIIRecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; chromosome CDS123387 630 + 0.239683
pol DNA polymerase I 3'-5' exo domainRecName: Full=5-3 exonuclease; EC=3.1.11.-; chromosome CDS471064 864 + 0.238426
priA primosomal protein n'RecName: Full=Primosomal protein N; EC=3.6.4.-; AltName: Full=ATP-dependent helicase PriA; chromosome CDS124043 2163 + 0.182617
recB exodeoxyribonuclease V 135 kD polypeptideRecName: Full=RecBCD enzyme subunit RecB; EC=3.1.11.5; AltName: Full=Exonuclease V subunit RecB; Short=ExoV subunit RecB; AltName: Full=Helicase/nuclease RecBCD subunit RecB; chromosome CDS498483 3540 + 0.198305
recC exodeoxyribonuclease V 125 kD polypeptideRecName: Full=RecBCD enzyme subunit RecC; EC=3.1.11.5; AltName: Full=Exonuclease V subunit RecC; Short=ExoV subunit RecC; AltName: Full=Helicase/nuclease RecBCD subunit RecC; chromosome CDS495334 3186 + 0.190835
recD exodeoxyribonuclease V 67 kD polypeptideRecName: Full=RecBCD enzyme subunit RecD; EC=3.1.11.5; AltName: Full=Exonuclease V subunit RecD; Short=ExoV subunit RecD; AltName: Full=Helicase/nuclease RecBCD subunit RecD; chromosome CDS502034 1809 + 0.200111
rep ATP-dependent DNA helicase RepRecName: Full=ATP-dependent DNA helicase Rep; EC=3.6.4.12; chromosome CDS628697 1977 - 0.223571
rnhA ribonuclease HRecName: Full=Ribonuclease H; Short=RNase H; EC=3.1.26.4; chromosome CDS278071 486 - 0.265432
rnt ribonuclease TRecName: Full=Ribonuclease T; EC=3.1.13.-; AltName: Full=Exoribonuclease T; Short=RNase T; chromosome CDS204291 660 - 0.315152
sbcB exodeoxyribonuclease IRecName: Full=Exodeoxyribonuclease I; Short=Exonuclease I; EC=3.1.11.1; AltName: Full=DNA deoxyribophosphodiesterase; Short=dRPase; chromosome CDS590975 1449 - 0.20842
ssb single-strand binding proteinRecName: Full=Single-stranded DNA-binding protein; Short=SSB; chromosome CDS581833 489 - 0.292434
topA DNA topoisomerase IRecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; AltName: Full=Omega-protein; AltName: Full=Relaxing enzyme; AltName: Full=Swivelase; AltName: Full=Untwisting enzyme; chromosome CDS309636 2562 + 0.25566
ycfH hypothetical 29.8 kD protein in holB-ptsGRecName: Full=Uncharacterized deoxyribonuclease BUsg_343; EC=3.1.21.-; chromosome CDS388745 795 + 0.23522
yqgF hypothetical 15.2 kD protein in gshB-ansBRecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; chromosome CDS585718 414 + 0.2343