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COG category: Replication, recombination and repair
Organism: Serratia marcescens
Gene type: CDS

Number of genes found: 20

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# Serratia marcescens

>SMR0088 putative DNA helicase
MTKRLTWEQKSIVSHDTGHALVKAVPGSGKTTTLVKRVERLVKTGTDPRS
ILILMYNKSAQVSFTENLKTALMSSVIPEIRTFHSLALKIVGYGERQQII
KKKDLITPSDYRYEQLVKQAYRYGFDHEANYIDPNEIENFELFIARCRAA
AVTPVDAANDPTFSNIKREFIHAYGRYCELLEENSLRTFDDCLIEAVALL
RNDSSLGAHFKHIIVDEYQDVNLIQHDMTRLLSKSDTSVMAVGDVNQCIY
EWRGARPDFIGGLFERHYPNTKVFQLSCTFRFGHELSLMANSVIRRNSTK
LTKLCVSHPSTPKTEVRLHFDNCLSKVLSNLSVSSGTQAILSRTKANLAE
AEIALRLCGLPYRYLNGSSALHTRTEIGILVVGVLLSVYGDLRLLENHPN
KQAIVYGFLKEAGFRWQKGQFKAALSGLMAPHADLWSALGQLFEGAQYQK
DRLGRLATICQKDGEETPAIDVLRRLSMEGFIDSVGSEGVTRTGSNDQQR
GVVRIGELLDSSKIDSRTFLNLILNPGEAATDCDPFILSTLHGSKGLEWD
NVILIGLNEQEFPGGKPDDVYSVRTSMNTPPAEEEIEEERRLFYVGITRT
KQQLNLVVPLDEGLARWLKNRWDSTPKKSPIATRFVYEAGWTACAVTSDA
IYNSTVEKQKADFSKFHQWYLRDLQRLKV
>SMR0166 putative exported nuclease
MFFFTKLLLPIMIVVFPVASWGNSTTFEAKVVKIVDGDTITALDAQNTTI
KIRMYGIDAPESKQAFGQKAKQALTTAIATKIVTVIDHGTDIYGRMLGTI
WLDGYDINASMVDSGYAWVYRFEDNAIVPGYIKYESAAQKEAKGLWADTN
PVPPWQWRQANEKPRKVKEKK
>SMR0096B resolvase/recombinase (pseudogene)
MKIGYARKSTHLQDVAHQVDELTKAGCEQIYQDQTSRSGPKRDKKGALE
>SMR0272 modification methylase
MSTISTDLIARIYAASELPLSNDELYREVQRETGMSDAELHELKEFGSDK
TRTSGVKHKVRWFQQTLRQAGVIERVPEKRGVWRYSSKTKTNLHESWEKL
CVVGFSTSLGASVFGNAYAFFSNITEQIHLCLTSPPYLLRNSRDYGHGGG
RGEQVYIDWLLRILEPIVKQLVPGASVALNITQDSFNRGRPSRSLYLERL
TLALCDKLGLELMDRLQWVNRSKPPSPTHWACKQRVQLCSSYEPVLWFTN
DASKVRSNNLRVLQPHSEQHLKLQAAGGENRTTFYGDGAYQLKSGSFGNK
TEGTIPKNTLFYGNSCADTRFCHSIARELGFPLHGATSPTRLAAFLIEFL
TEPGDVVVDPFAGLHKVPIAAERLGRRWLATDKIMEWLAISRNLFTAAPG
YKSNPMLDELAELYRA
>SMR0139 ATP/GTP-binding protein
MRLRKLKLKNFRGYRNSTEIIIDESMTGIVGRNDFGKSTLLEALAIFFET
EGMKADKNDMNCFSLREGDGRFEIACEFDDLPDFIMIDDRVQTTLASEHL
LNEDGNFEIVKTFKATTSGKPEQTCIRCIHPDEEPLRNLLGMKISELKAV
GKEVEKNVADKRTASLWRQAIREAAAPYTCSEIMLDVDKEFGTDTKSLWG
KILDLLPTYAIFKADRESSDGDSEAKNPLQQAVKDAQAALQDKITALENE
IQDSVLDVAQRTLDKLREMAPELASELTPRFKEKPKWTFNFTLDGENGIP
INKRGSGIRRLILLNFFRAEAEKNVAGTPRNVIYAIEEPETSQHPNYQMM
LMKALLALAGQPHRQIIVTTHVPALAGLIPVEGVRYVTRNEAGEPVVKMP
DDAVLKEATESLGVLPETGMERAQGIVLVEGKSDVTFLRHAASSLKQSGA
LPASLEDVKIVPVLIGGCGSVKHWVTLNLAKDLGLPWCVFLDSDIGGDPA
QVLSIQKRKKEVEEAGKVFFATRKREIENYLCPDLIEEITGVAVTFTDTC
DAKKIIGRAVGMKPDNVLDKFWPQMTSERIISRSTYHDGTQERSELVEIL
SDIVSMTR
>SMR0228 Tn10L, Tn10 transposase for IS10 left
MCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTELGRNLPT
KARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSD
IREQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASIL
PSNTTPLIVSDAGFKVPWYKSVEKLGWYWLSRVRGKVQYADLGAENWKPI
SNLHDMSSSHSKTLGYKRLTKSNPISCQILLYKSRSKGRKNQRSTRTHCH
HPSPKIYSASAKEPWILATNLPVEIRTPKQLVNIYSKRMQIEETFRDLKS
PAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWLAGVHAQKQGWDKHFQA
NTVRNRNVLSTVRLGMEVLRHSGYTITREDSLVAATLLTQNLFTHGYVLG
KL
>SMR0219 Tn10R, Tn10 transposase for IS10 right
MCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTELGRNLPT
KARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSD
IREQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASIL
PSNTTPLIVSDAGFKVPWYKSVEKLGWYWLSRVRGKVQYADLGAENWKPI
SNLHDMSSSHSKTLGYKRLTKSNPISCQILLYKSRSKGRKNQRSTRTHCH
HPSPKIYSASAKEPWVLATNLPVEIRTPKQLVNIYSKRMQIEETFRDLKS
PAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWLAGVHAQKQGWDKHFQA
NTVRNRNVLSTVRLGMEVLRHSGYTITREDLLVAATLLAQNLFTHGYALG
KL
>SMR0300 dam, DNA adenine methylase
MTRHLRHMPIIKWAGGKTKLMPFISHHYPHDHSCRWVEPFIGGGAVFLNM
FAQNALLADSNPDLINLYRTIQRQKTNFINQVQNLADKTFVEKDYYEMRD
RFNKTCISGQPLQRAALFYSLNRLGYNGMCRYNSERIYSVPWGKHTELKL
DFNKIDYLSFRLSGIELITAGFEETLAATGEGDQIYCDPPYDKTSKTSFV
SYDGKPFSQSDHVLLANMLVDAHRKGAAVAISNSLTPFTLGLYEERGFVI
HRLSAYRSVGSKPNTRKTETEILAVLK
>SMR0165 dcm, DNA-cytosine methyltransferase
MKRYTHDLETDLNDVDKTPSLIHKTLLTASTIYDLKYLAQVLNDENGSNW
SRASLKRQVTCIPEHCDLSIADGRYLQTLIPSRPADYEDRHFSFIDLFAG
IGGLRSGFDAIGGKCLFTSEWNTYSSRTYRANWYCDENEHRFNSDIRDIT
LSNRPEVTDDEAYKFIDASIPDHDVLLAGFPCQPFSIAGVSKKNSMGRKH
GFECDTQGTLFFDVARIIRAKQPAIFVLENVKNLKSHDKGNTFNIIMKTL
DELGYDVANSESTGADDPKVIDGRHFRPQHRERIVLIGFRRDLRLKDGFT
LRDIKDFYPDKRPSLSDLLDPSVDSKYILSPKLWEYLYNYAKKHAAKGNG
FGFGLVDPSNVNSVTRTLSSRYMKDGSEILIDRGWSHELGETDFHNTYNM
DRRPRMLTPRECSRLMGFDKPGESVFRIPVSNTQAYRQFGNSVVVDVFAA
VAKLLKSRIEFAASQRLRQFYDEVS
>SMR0246 insJ, insertion element IS150 hypothetical protein
MSKPKYPFEKRLEVVNHYFTTDDGYRIISARFGVPRTQVRTWVALYEKHG
EKGLIPKPKGVSADPELRIKVVKAVIEQHMSLNQAAAHFMLAGSGSVARW
LKVYEERGEAGLRALKIGTKRNIAISVDPEKAASALELSKDRRIEDLERQ
VRFLETRLMYLKKLKALAHPTKK
>SMR0245 insK, putative transposase for insertion sequence element IS150
MKVLNELRQFYPLDELLRAAEIPRSTFYYHLKALSKPDKYADVKKRISEI
YHENRGRYGYRRVTLSLHREGKQINHKAVQRLMGTLSLKAAIKVKRYRSY
RGEVGQTAPNVLQRDFKATRPNEKWVTDVTEFAVNGRKLYLSPVIDLFNN
EVISYSLSERPVMNMVENMLDQAFKKLNPHEHPVLHSDQGWQYRMRRYQN
ILKEHGIKQSMSRKGNCLDNAVVECFFGTLKSECFYLDEFSNISELKDAV
TEYIEYYNSRRISLKLKGLTPIEYRNQTYMPRV
>SMR0243 insL, putative transposase for insertion sequence element is186a/b/c
MNYSHDNWSAILAHIGKPEELDTSARNAGALTRRREIRDAATLLRLGLAY
GPGGMSLREVTAWAQLHDVATLSDVALLKRLRNAADWFGILAAQTLAVRA
AVTGCTSGKRLRLVDGTAISAPGGGSAEWRLHMGYDPHTCQFTDFELTDS
RDAERLDRFAQTADEIRIADRGFGSRPECIRSLAFGEADYIVRVHWRGLR
WLTAEGMRFDMMGFLRGLDCGKNGETTVMIGNSGNKKAGAPFPARLIAVS
LPPEKALISKTRLLSENRRKGRVVQAETLEAAGHLLLLTSLPEDEYSAEQ
VADCYRLRWQIELAFKRLKSLLHLDALRAKEPELAKAWIFANLLAAFLID
DIIQPSLDFPPRSAGSEKKN
>SMR0193 mucB, putative UV protection and repair protein
MHVDINGAYAAFECAMDPKLSKKPLIIASNNDSSVIAMNKLAKSVGIKRG
TPIFKCRDLIQQHRIEVRSSNFTLYEDYSNRFHETLESFAPQSSRYSIDE
NFMLLKNMNKIIDYEDYGRLIRSTLLHNLSLTCGVGCSSTKTLAKLCTYA
SKRWAATGGVVVLTDQARIRKLLSLISTREIWGIGRKISERLSAFGIITA
GDFYNSDVRFLRKSFGVEIERTWRELHGEPCFRLHESPPVRQQIIVSRSF
GQRLNEIGKLHEAVSFFTARAAEQLRKDGSWTRQITVFIQSSNYAQGENR
YSNCGIEPLTATQDTRDLVDAAMTILNRIYRPGIAYAKAGVMLSAMTDGT
EQLSLFDTRPARPGSQALMKVMDRFNKEKRGALFLLGEGIQQDFRMKQAM
LSPRYTTRWDELLVVKA
>SMR0191 retA, putative reverse transcriptase/maturase
MMYGEEKSDSLIVAAKQANNPKGAESVERRSGAKGNAEQPHMRRTQSRES
MSQRLSRVREAAKQRKKERFTALFHLLTVEALEAAFLSLSRKAAAGVDGI
RWMDYAGNMKNNITDLHRRLHQGSYRAQPGRRHYIPKADGKQRPLGIASL
EDKIVQYALVKILNAVYENDFMGFSYGFRPGRSQHDALDALATGLVRTNV
NWVLDADISQFFDRVSHEWLIRFTEHRIGDRRVIRLIRKWLTAGTSEEGQ
WRATEEGTPQGAVISPLLANIYLHYVFDLWAHQWRRRYATGNVVMVRYAD
DIVIGFDKRYDARRFRIAMQRRLREFGLTVHPEKTRLMEFGRFAAENRAI
RGKGKPETFNFLGFTHISGKDRNGRFMLIRKTRRDRMTATLKAIKDGLRR
RWHYSIPEQGKWLRRVVQGYLNYHSVPGNFPTMQKFRTHVTNLWRRALRR
RSQKDDTTWTKANKLAAAWLPRVRVLHPWPVERFTARHPRQEPGA
>SMR0095 tnIS26, transposase for IS26
MELHMNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHST
IYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVD
SRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRA
LALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAY
ATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
>SMR0097 tnIS26, transposase for IS26
MELHMNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHST
IYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVD
SRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRA
LALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAY
ATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
>SMR0109 tnIS26, transposase for IS26
MELHMNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHST
IYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVD
SRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRA
LALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAY
ATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
>SMR0112 tnIS26, transposase for IS26
MELHMNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHST
IYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVD
SRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRA
LALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAY
ATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
>SMR0103 tnIS26, transposase for IS26
MELHMNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHST
IYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVD
SRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRA
LALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAY
ATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
>SMR0031 trhI, putative DNA helicase
MGKPTEEQRPVIENASANNMVIAAPGSGKSFTMIEAVISILKKYPYARIG
MVTFTRAATNALAAKLQKRLSKKDLDRVLVDTFHGLVKKQLDMIRWPGKM
LIGPAQRSVIHRALKESGVTMKFAEAEFVIDAIGREMDTDVISVRHNRQQ
IHLFNTYQALCQKDHVADLNALSKFVVGQMHSGKMRTLDLTHLIVDEVQD
TDSIQFSWIALHTRAGVYTSIVGDDDQAIYSFRSSGGVKIFQQFEKHFRP
NIFYLNTCFRCEPEILEVAGALIGKNVYRYAKELRSAKKGGGKVTFRSYV
DMEEQIQGILSLINQDPHGWAILSRNNAHLDELESLIEQPVIRYGGKSFW
DEKETSDVLSLMAFFRQSNDPRLMKRVLALFGEQESVLDEVALSMRGRKV
TFGDLAIPEDSSLETKTLHSNFVRFTQESSDKVEIAKRFANLTKWMESSS
IKMRSNKGTATLTKIALDTCKQWAEKTGWMNMINRAAAMSLGPRKKDEEY
SPEKVVLSTLHGSKGLEWNKVIIMSCNADQIPSKRSVGEEAIEEERRLLY
VGFTRAEKQLFVMWYGDPSFFLRECSEEKIKEAANIRISPLYTE