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Gene list

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COG category: Replication, recombination and repair
Organism: Proteus vulgaris, UR-75
Gene type: CDS

Number of genes found: 29

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# Proteus vulgaris, UR-75

>gid:876932  orf116  single-strand DNA binding protein
MASRGVNKVILVGNVGQDPEVRYMPNGGAVANLTLATSETWRDKQTGESK
EKTEWHRVVLFGKLAEITGEFVKKGSQIYIEGALQTRKWTDQAGVEKYTT
EVVVNVGGTMQMLGGRQGGNDNQNNNAGSNQGWGQPQQPQPNNNQTPAQQ
LNQRSQGQNQPQGHGNSSQPIDFNDDIPFAGLGASFGKHTIHAIC
>gid:876944  orf128  DNA helicase
MSKPKPATSEIIAKAYQSFLDKKGVTARMGQKRMMNLCYGLVNSIKVDDS
GNRTSAPAVCVIEAGTGTGKTLGYSIPLIPLAQAKEKTLILSTATVALQE
QVVHKDLPDIRASAGLDFTFAMAKGRGRYFCKLRAAREAEKEMELFGFQD
ETIKILTDEFDDDLWNGDRDTYPVEITDKIWQKANAVAGQCPAHHCPHFK
SCPFYKARDEMDSVDVIIANHDIVMADLSLGGGVVLPEPKNCIYVFDEGH
HLTSKAISHFSSTCSLDAAIKWSDEIFDMVIPLVDSYDDNMERYATTLNS
LASELKKELVLTKEFLLRNLPFKGEYDNRQTCIFPRGETPHEVIHYAKTV
GKVLEELKNTNGKMTAIIEDKAKGPEGGEHKMIVGELDNKLSTLVTAWAQ
FVNVNKRDKQGIPFARWVDVNRDKKNEIVINSSPVHAGEMLKSIVWKDAH
AAIITSATIRSLGKFDAYLDQAGLPADTPTLLAQSPFDYENNGVLFIPKM
KFSPKDSAAHTTEVGSLLPTLVLRKRGCLVLFASKKQMTEVFEMMPDDIQ
DKILMQGSIPKSEIVSRHKLRIDRGDDSIIFGMSSFSEGVDLPGDYCNNV
IIAKLPFMVPTDPVSLTLAEWMESVGRNTFEEISVPDACIKLIQSVGRLI
RTEQDTGAVTILDNRLVTKRYGAGILDSLPPFKRVIRR
>gid:876825  orf13  resolvase
MFIRAYLRASTEDQFADRAKEMLEQFVQERGHKIASYYRENISGTKLDRP
ELGRLLMDSHRNDILLVEQIDRLTRLSNSDWMTLKKQIEQHELRIVSLDV
PTSWQALSDKGPSQADPITRAVITAINNMLIDLMAAMSHKDWLSRRHRQK
QGIERAHTLGKYRGKQADQERHKKVLYYRQVKKLSIRETAEATGYSTSQV
CRIQALFRPEN
>gid:876947  orf131  Dam methylase
MRSVLKWVGGKSTLMGSINRILPEGNRLIEPFTGSCAVTMNTSYDSYIVA
DINQDLIGMYRMVRDAPDTLVAIVRDFFSHANSADEYYRLRDIFNQRTSD
KPTQAALFLYLNRHGYRGLCRYSKKKGTFNVPYGHYKAPLFPEKEIYHLS
EKLQKATLLCASFQETLLLAQPGDVVYCDPPYVEKGRFTDYHSSGFNMSH
LRELVGILESMLEKGVSVVASSHNEKAIRDIYARFSQTELTAYRSIGVKG
GKGKRADELLLSRIAFPLALPFREA
>gid:876949  orf133  DNA recombination protein
MHTPFSVKNLAIYRISRDIDFSKLAELAVNYKFTPCGSQDMAKTGWISPL
GDEFENLTHEASGVILLCQKSEKKNIPASVIKEKLDEKVTKMQAEQGRKL
KRTEIASLKDEILHTLLPVTLPKTTRTYIWIDKQAGLLIVDASSARRAED
VNALLRKTLGSLPVVPLTMEKPVELTLTEWVRSGELPAGMVLGSDITLKA
ILEDGGIVTARNQDLICDEIANHIESGKVVTKVSFDWQERISFVLKDDCT
IGRIRFSDVLKEQNDDIDREDVAARFDADFVLYTGEVMALINTLISSLGG
EADRTAHEDVNQDKKEGVAA
>gid:876970  orf153  transposase
MVKRIRRLFSAEFKLEAAQLVLDQNYSVVEAANAMGVGKSTMDKWVRQLK
LERKGISPKASPMTPEQVEIRELKKKIAQLEEHNEILKKATALVMSDSLN
NSR
>gid:876971  orf154  transposase
MFSVHRSSYQYWRHRAKTPSAEQIRLRALVREAHESSHGSAGARTIADIV
SRTKQVPLTRYRATQIMKSLGLVSCQMRKHRYTKSTQEHVEIPNHLGRQF
AVTEPNQVWVGDVTYIWSGNRWIYLAVVMDLFARKPVGWAVSFSPDSQLT
GKALSMAFESRGKPRNMLFHSDQGSHYTSRQYRQLLWRYQIKQSLSRRGN
CWDNAPMERFFRSLKTEWVPILGYRNFIEAQQEITRYIIGYYSQIRPHQY
NGGLTPNESERLYWESSKTVTNFC
>gid:876974  orf156  transposase
MVKRIRRLFSAEFKLEAAQLVLDQNYSVVEAANAMGVGKSTMDKWVRQLK
LERKGISPKASPMTPEQVEIRELKKKIAQLEEHNEILKKATALVMSDSLN
NSR
>gid:876975  orf157  transposase
MFSVHRSSYQYWRHRAKTPSAEQIRLRALVREAHESSHGSAGARTIADIV
SRTKQVPLTRYRATQIMKSLGLVSCQMRKHRYTKSTQEHVEIPNHLGRQF
AVTEPNQVWVGDVTYIWSGNRWIYLAVVMDLFARKPVGWAVSFSPDSQLT
GKALSMAFESRGKPRNMLFHSDQGSHYTSRQYRQLLWRYQIKQSLSRRGN
CWDNAPMERFFRSLKTEWVPILGYRNFIEAQQEITRYIIGYYSQIRPHQY
NGGLTPNESERLYWESSKTVTNFC
>gid:876985  orf165  transposase
MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRW
VQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGR
TVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALL
KREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIK
GIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
>gid:876993  orf172  transposase
MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRW
VQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGR
TVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALL
KREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIK
GIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
>gid:877010  orf189  DNA restriction
MSRKNQVAAKPVSAEKAMKQRFFGMSGLIIVLNIVFADNIRVQLLTLGLM
IIIQLLFTPAGRVLVGTWAKKEKWRTLNVPQKTTFFKFYVAIPVIALALL
IHTATFARDLADVVMGFVFPPSEDISDSAMLTKLNSKMDAALPNVIASLA
LYFAYLFGVGSVVKNMQIGMSGKMIKRIKNSADAKRVLEQMTWDQFEKIL
RKFFETKGYVATLTNTGADGGVDIALSKNGRREMVQAKHWKVNRVGVAVV
REIYGVVQAEGMHKGFIVTSGLFSEDAREFADKVGGKIVLIDGNLLIEII
KGDSNFEKQTSDGISSAVPLDSNSCSICGGTMLLRTGNKKTFWGCSNFPE
CRNTREV
>gid:876832  orf19  transposase
MKLSRSTYYAWQKRPVKPLDEYALELHQKVNNLFRESRESLGYRMLGAQL
RQEGYVISDYRTRKLMKQLGLVVKQRKRYRGASKGKAIATADNLLNQNFN
PVTANEIWAGDITYLKTPDGWLYLAIVMDLYSRRIVGWHMSPKIDTALIS
KALMMAYNLRSPSKGCVFHSDRGSQYTSGHYQALLKSYDMRSSQGDVGAC
WDNAVVERFFGSLKHDWLFKKSHANRMEMRQDVLDYLRYYNLTRLHTANN
YLSPVAYENSFRKVS
>gid:877014  orf193  helicase
MLLVALTDEQEKLASFTGQLLCGKAYAGTGKTFTLIQFSIRNADKRILYI
VFNKAIREEAETKFPKNVHCATSHAMAFSRFKEYADKTRMNISVKEYRDI
LGEDNWQVVKLAVGGVNNFMNSADRVITMEHIKKDVQDEDKISSTRFDTA
LRAAKRLWEGMIDINSDVPCTGNTLLKLFQLSNPSLHTLYDIILFDEGQD
ANPVTLDIVLNNNCRKVVVGDDHQMINRWRGAENALAVVEEQGAVILRLT
KSFRFGPMIAGLANLILSMKGETHPLIGLGQLDYISSPQEVMAQGFHAII
SRTFMGVVQSAHEAIMMGKRVMWNGGIAKYNLDELLDIHSLKLMKYDQIK
NKKILKDYGSWANYEDIAEKTKDTNMNRAIRIMDEYIDIPGMISTMRNNE
AKSEAEADLIVTTAHTSKGLEWNNVVLNDDFGSVLEAIDMKKPKASIIDE
MNLIYVAITRAKDYLSINSTIIELMREFSVRQENGKSIVII
>gid:876833  orf20  transposase
MKRKSPKQYTEDFKKEAINLVAEQGYTVSQAANALGITTKLLYAWRKHRE
AENKPNALTFLERQELLTLRKEVKQLKMEKEILKKASAFFAKELL
>gid:877043  orf222  single-strand DNA binding protein
MFSKATLIGVVGLEPKYKRAANGKKSVIAFRIGCDVLTTSKKITEWYSVK
AFGSVADDLIKHIKEGSNVYLEASIRSRRWIAGGVERHGMEFHAFVARVM
PEPVVTHHSQAETLSAPHSDASLTLALPFPEDEAIVNAPVPAQSIQPAHS
EKPKQPSSPKPKELTADEARQAGSRFRQIFESHKQRIADLATAAPATDDP
APLNQSKAIGLSVQPPAPANTRKLLIKHCKSPSSTEFLSTGNPHTDALLN
ARNALIRPVDNNVNEMAGYAHIRGD
>gid:877052  orf230  transposase
MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWR
KQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEA
VEYGRAKKWIAHAPLLPGDGE
>gid:877053  orf231  transposase
MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDT
DVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNA
LLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFAL
DCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNG
SCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPK
PDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE
I
>gid:876844  orf31  Single-strand DNA binding protein
MAQRGVNKVIIVGKLGQDPEVHAMANGGSVANISVATSETWRDKQTGEQR
EKTEWHRVVFFGKLADVVGEYLRKGSQIYIEGQLSTRKWQDQSGADRYTT
EVVVNPASGGTMQMLGSASQQNQQNNRQGSQQPNNAQSGQQGGWGAPNSD
DPPF
>gid:876850  orf36  transposase
MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMV
EVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMR
LFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQ
GTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSG
LTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVD
WLIAERPGKVRTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGF
VKARYKGLLKNDNQLAMLFTLANLFRADQMIRQWERSH
>gid:876857  orf42  transposase
MFSVHRSSYQYWRHRAKTPSAEQIRLRALVREAHESSHGSAGARTIADIV
SRTKQVPLTRYRATQIMKSLGLVSCQMRKHRYTKSTQEHVEIPNHLGRQF
AVTEPNQVWVGDVTYIWSGNRWIYLAVVMDLFARKPVGWAVSFSPDSQLT
GKALSMAFESRGKPRNMLFHSDQGSHYTSRQYRQLLWRYQIKQSLSRRGN
CWDNAPMERFFRSLKTEWVPILGYRNFIEAQQEITRYIIGYYSQIRPHQY
NGGLTPNESERLYWESSKTVTNFC
>gid:876858  orf43  transposase
MVKRIRRLFSAEFKLEAAQLVLDQNYSVVEAANAMGVGKSTMDKWVRQLK
LERKGISPKASPMTPEQVEIRELKKKIAQLEEHNEILKKATALVMSDSLN
NSR
>gid:876863  orf48  hypothetical protein
MNLKSILNQTRETLKEKGISADNLRKVTAPSELITQLVSTLATMSGDYKG
SYSPAPDYQGLLRQFNALQQLNVSFGKQLTFYREKAKQEDDGPAELKRLQ
DEVNSERGANEQLTVENDRLRTERLEADVETERLKALVLKLGGNPECNDD
LG
>gid:876865  orf50  DNA polymerase III beta chain
MTTTLNQQAAPKKRTFKDLPGFDISANDMLSIIDAPCMIIKRGNVQFKVL
EMLTLTLVGDNLSALGVDYNTGQVISRGVVHKANGDMVASVPATHISTLF
RNMKGEETVNVRCDQERNRLIIRTGKNAYNIPLCMDAIPVVDESDLTAKY
SITFPANMLHRTLQRVMHSAGKNDVRHYMNGVFLSLDKNVFNAVATDGHR
MSVMTEDVLFTDEPQEDITSPVAPVSLSGTSSGVILPIEVCPILMKLLAA
NKGSFRMDYSESYLTFNLGDVTVVSNLINGRYPDWRRVAGVVKHNTEKFS
VNALVLREALSRALPLINAGAVNKNSNSTGVFVFKSNALMIKSPSQNLIE
CKEVLDIEKVAGEQEDKIEIGMNCEYLLRSLNSLVSHSGEEADITFALKD
TLTGMEIGFGDDCCDIIMPVRF
>gid:876868  orf53  dam methylase
MNTVLKWVGGKQGVMAQLKLALPKGTRLIEPFCGSGAVMMNTAYSNYVLA
DINADVINTYDTIRNAAESVIAALTELYETCRTREHYDAIRKEFNARTAD
PVRMAAMFIYMNRHGYRGLCRYNKRKGEFNVPWGDYRKPYLPEKEIRYMA
DRLENADLLCAGFEETLKLAGEGDVVYCDPPYVNPGKFTGYHSSGFSEAQ
QRALVDILNTLPEKGVHVVASSHDAENIRQMYAGFTVKGFSAPRSVYNGT
GEGKKAKEIIAIRQAVFSGKTAA
>gid:876870  orf55  DNA recombination protein
MPLFRPKSVVVYRITRQIDFSNIAEQLKTFVFQPCGPQDMARTGWVSPLG
EEYEELTHQANGLILLTQRNESKIIPPATVKELVRQRVTKLEKEQHRRLK
RTEISALNDLVLGELLPKALSKYANMNMWIDPKSRLIIVDTTSFKRAEDA
AALLRKTLGSLPIIPFTLETPVELKLTEWVRSSELPPGLALCDEATLEAI
LEDGGVVTTKRQDLVCDEIANHIEAGKLVTKLSMSWMEQLNFVINDSFVI
SRLNFADALIEQNDDIDREDEVQRFDADFVLFTGVIMELLDQLIAAFGGE
AKSSAEGAEGTEDSGEGGAGGESDDEDAQGGDE
>gid:876819  orf8  UV protection and mutation protein
MYGLIDINSCYCACEQAFRPDLAGKPVVVLSNNDASCIARNKQAKALGIK
MGEPFFKIKDLIERNNVAVFSSNYALYSAFSSRFASVIESLTPRSSVYSI
DELWFDATNITGLMTLDAYGRMLREEVQRQTTLTCGVGIAPTKTLAKLCS
HASKTYPATGGVVALDDVTRLEKLMRLVPVEDVWGVGPRLGKRLRFMGVE
TAFQLSCLDPVRVRKQFNVVLERTVRELRGEPCMALDENDVMKQQIVVSR
SFGERVTNLHEMQQAITDYAARAAEKLRQEKGYVSVIGVFIRTSPYAVND
VPYSNQATEMLVTPSNDSRDIINAAQRALRGQFGYRKLLYVRLIF
>gid:876895  orf80  UV protection and mutation protein
MMLCLADINSFYCSCEAAFNPRLAGLPIVVLANNDHIVISRSKEAKALGI
KMGALYFENINFFKYHNVQVFSSNYSLYQNVSDRVMSVLAGFSIGMEVYS
IDEAFLTVPDRIPNSSLEDFGRAIQQDILQITHVPVGVGFGPTKTLAKLA
NHAAKSWSKTGGVVDLSQKTRQRKLMALLPVGDVWGVGRRIAAKLKVMGI
HTILDLADADIAMIRKTFGVVVERTVRELNGDACIELEEVRKVKEQIISS
KSFGKKVERYDDMHQAVCSYAERASMKLREEDQLCSVVSVFVSTSHYSPG
SMYSNRAIERLVYPSADTRDIINAAVRALNAIWRDGHQYHKAGIMLSDFT
DSKITQFDLFNEVQPFKRSEELMRMLDDMNRSGKFNIGFAGKGCDPTWQM
RRGMLSPEYTTNVNEIPIAKVR
>gid:876902  orf86  resolvase
MKFAEGMGLQIACWFEENESGAQLHRPELFRLLNVAMPGDIILVEQVDRI
SRLNTDDWEKLKYLIGHKGLKVVSLDLPTSYQFMSRTDEFTERMLAALNS
MMLDMLAAVARKDYEDRRRRQAQGVQKAKQEGKYKGRPVNKILHQKIEGL
LMEKKSYSQIENLIGCSRHTISKVSKLMKIVQ