Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View as list

# Xylella fastidiosa Temecula1, Temecula1

>PD0154 hydrolase
MSGMNRPLPMIHRIEEIGDSQFRRQQLDLEFSNGERRLYQRHVARGYGAV
VVVPLLDPQTVLLVREYAAGIHRYELGLVKGRIDANETPEQAADRELKEE
AGYGARDLRVLRAITLVPGYMNHQSWLVIASDLYPERLVGDEPEEIEVIP
WKLSKLHDLMLREDFSEGRSLAALFIVREWLEHQQ
>PD1649 DNA modification methylase
MPHDEYVRWQRDCLTEMMRLLRNDGAIFYNHKWRVQAGLLQDRTDIVTGF
PVRQIIIWQRNGGINFNSGYFLPTYEVIYLIAKPDFKLKPKANAIGDVWT
IPQESKNPHPAPFPVELAQRCIESVGAEPVLDPFMGSGTIAVAAEILGYD
WVGIEKSPKYVEMSLDRLKSLKGK
>PD1561 replication related protein
MSVSQLPLALRYSSDQRFETYLHAPSGLIAQLRALVDQCSREWIYLVGAS
GSGKTHLALALCAAAEQVGQSVAYLPLQVAVGRLRDALEALEGCVLVVLD
GLQAIVGMREDEIALFDFHNRARAAGITLLYTARAIPDGLGLTLPDLRSR
VAQCIRIALPTLDDVGRASVLRERAQRRGLMLDEAAIEWLLSRGDRDLGS
LVMLLERLDRESLATKRRVTIPFLRHVLAEGGG
>PD1601 conserved hypothetical protein
MTRVDTQALRARIDLVEVVGRYVTLQRTGAEYTGLCPFHDEHTPSFTVIP
HKGFVHCFGCGAHHDAIGFVMRYLNVDFREAVRQLDRGALPQAEQQAQRQ
RPEYVPDMVWVPLLPVPEDAPEVMGDAHWTVPIWNPKRGRAARLKVQRLD
AYRDAQGRLLGYVARAQIKDRDTGALKKWTPTLTWCVSPTGARQWCLQHF
PEPRPLFGLDTLAVKPDAPVLIVEGEKCCAAGARAWPQYAVVAWPGGANG
IRKVDWTPLAGRDVVLWPDADEVGRKAMLGNRTDAGDFRAGVAHYVSRVG
VRSIGMIDTHGCSKGWDLADAFEKDGWTPPQAAAWAAARRVDVNVVRGGG
R
>PD1275 conserved hypothetical protein
MPEASSPFPDGIVLGFDVGTRRIGVAVGSALGAGARAVAVIDVHGVAVDW
NALDRVKRNWLPVGLVVGDPLTLEGHDQPIRKQAHAFACQLRERYRLPVV
LVDERSSSVEAASRFAGARAAGYKRRRDADTLDAIAAAVILERWLADPMQ
ATSLP
>PD1194 phage-related protein
MNLRPYQHTIVDFILTHPRCNLFVPMGLGKTVATLTALDVLLVVEDIAPI
LVIAPLRVAATTWPDEVAKFPHLRHLRVSVVVGSAAARRHALEQEADIYC
INYDTLKWLVEFYKDRWPFRMVVADECSKLKGFRLRQGTRRARALATHVH
TKVERYVGLTGTPAPNGLQDLWALMWMVDRGARLGTHFKAFIDRWFRAMQ
IGSDPHAVRFAPTPHASQEIQDKIRDLCLSLDPQAYFDLRQPIVNTIRVA
LPAHAQRLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDD
TRQAWEVVHDAKLEALHDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRA
LDKHPDTIRDWNAGNIPVLFAHPASAGHGLNLQDGGNILAFFGHWWDLEQ
YQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDELVMARRESKREVQDL
LLEAVKRRETGKPLTSQGAMTR
>PD0673 ATPase
MTRQRFPTLQHDLLGVAPLLQPLAERMRPRTLHEMVGQKRLLDPDRALHR
AVASGHVHSMILWGPPGCGKTTLSLLLAHYIDAEFRSVSAVLSGLPEVRQ
ILADAAQRFSEGRRTVLFVDEVHRFNKMQQDAFLPHIERGSIIFVGATTE
NPSFELNSALLSRCRVHVLEAVSSQDIVVALQRALQDTERGLGGQKIEVS
QASLLEIAKAADGDVRRALTLLEIAAELAQDEQITADLLSQVLADRSRRF
DKRGEQFYDQISALHKSVRSSNPDAALYWLLRMLDGGCDPIYLARRLTRI
AIEDIGLADPRAQSMALEAWDIYERLGSPEGDLAFAQLVLYLASTAKSNA
GYVAFNVAKEDIRQTGTQDVPLHLRNAPTRLMKSLGYGIEYQYDHDAENG
VALEQTCFPDALGERIYYQPVSRGLEIKLKEKLDWLRAARAQIQADKPQP
PRA
>PD0923 phage-related protein
MWRYLVSRRSSSSDSAVYVNFSERERRADVEKAARLYETRRDRVEPSYVF
PAPSGEKGVGPNSNTGQKGVVGSYPVSIDYLTVVFSYARLAEAGYFDEPR
FLLYLLFGLSVDDVIVGSHTSVRWHFYNSSASIIDSNGDLVGKIGWDGNA
DSYCISLTGSACRYIHDWSKVKRSLASLDARITRCDVAYDDYDGILGTVR
HHEALAREHLAPAGGCLLFSSGGTPPRTRFLDDHGGGSGCTLYVGQRGHK
QLCIYEKGKQLGVAESPWVRYEVRLYAKHAVIPFDLLEEPMRYLRGSYDY
LCQLFSSVVVSPVSRIRTVVKHVEATGEALVRWLRRQVGPALGVLRQALG
CGFSDFIVDRVEREGLPSRFRRICRGGDLPAYLRETLVDCSVGVCV
>PD1014 phage-related protein
MNIIELTQGTPQWHTHRAKYLNASDAPAMMGCSPYKSRAELIRERATGIT
PDYDQATLQRFAEGHRVEELARPLAERIIGDDLYPCVGVDDMYSASFDGL
TLLEDTVWEHKQLNDTIRAAMTDGSTGQDLPLHYQIQMEHQSMVSGAQRV
LFMASAWNGEQLIEERHCWYTPNPELRTRIINGWQQLQADIAAYQPEPPP
PPAALGRSPEQLPALHIAVTGTVTTSNLPHFKACALAVLHNINRDLRTDE
DFANAEQTVKWCKGVETRLDATKQQVLGQTADIDAVFRTLDEIAEETRRV
RLELDRLVKTEKDHRRTEIVHTGLKTLRDYYASLNARLEEYALPIPADLP
AKIGDTIKGKKSMISMQEAVSAAVAHEKINITAHVERVRANITVMEACEA
AYRSLFPDRVSLCISKTPDDLRNLILARIADHQQQEQARIQAQRERQNTA
AAVPVHVPPSPHPSSELSSTTSSATAAPASSGDLIRLRQINEWIAPLAIN
SDGLASLGFVPVSTEYDVKWYAAAEFPVICHALKQVLSDASSRTAIKQAA
>PD0121 conserved hypothetical protein
MYCWHQNGQRVCSDTLPAEAVNDAREEFNAKNGMLKGEVQRALNENERAA
TASEEAQRRAGQDAQETRKRADQIMLASFQTEDDLRQVFLKRIATIDNNL
KIARYNATNLRQGLVNLLRNANERELAGQKVPEKLAADIEQRRQDLLSQQ
RLHTSFEQERATLSGEIEETLQRYRALKSSEANASPLAEP
>PD1321 phage-related protein
MIAPVFIHHIVAADTVDELVMVRRESKREVQDLLLEAVKRRETYKQLTSQ
GAMTR
>PD0910 phage-related protein
MWRYLVSRRSSSSDSAVYVNFSERERRADVEKAARLYETRRDRVEPSYVF
PAPSGEKGVGPNSNTGQKGVVGSYPVSIDYLTVVFSYARLAEAGYFDEPR
FLLYLLFGLSVDDVIVGSHTSVRWHFYNSSASIIDSNGDLVGKIGWDGNA
DSYCISLTGSACRYIHDWSKVKRSLASLDARITRCDVAYDDYDGILGTVR
HHEALAREHLAPAGGCLLFSSGGTPPRTRFLDDHGGGSGCTLYVGQRGHK
QLCIYEKGKQLGVAESPWVRYEVRLYAKHAVIPFDLLEEPMRYLRGSYDY
LCQLFSSVVVSPVSRIRTVVKHVEATGEALVRWLRRQVGPALGVLRQALG
CGFSDFIVDRVEREGLPSRFRRICRGGDLPAYLRETLVDCSVGVCV
>PD0225 conserved hypothetical protein
MSRPFSVSETLKADCFGRILLVNGKGEKFIRRDLGAVSWWLRGLAGWLAR
REVAALRQLNTLPAVPRLLNWDGVCLDRSFLSGQMMYQCPPRGDLAYFRA
ACRLLQQMHRCGVVHNDLAKEANWLVLEDGSPGVIDFQLAVRGDPRAPWM
RLLAREDLRHLLKHKRMYCPEALTPVERRLLKRPSWIRRLWFATGKPVYR
FVTRRVLHWEDNEGRGAKP
>PD1324 site-specific DNA-methyltransferase
MIVASSAAYRLHQGDALRLLCGIDSASVDAVITDPPYCSGAMRMADRFKP
TKRKYINNGTKHVAPDFDCDFRDHRGFLAWSSQWLSECRRVTRPGGVLLV
FTDWRMLPTLTDAVQSAGWAWQGIVVWDKTPACRPQLGRFRSQAEFIVWA
SCGLMNPKAHPVTPVGVFATGTAPREKRHQVGKPLALMEHLVKIVPPAST
VLDPFAGSGTTGVAALRAGHRFIGMELSPWYCDVTKQRLADST
>PD0801 conserved hypothetical protein
MDQPDALTELHSLAAQLERLIEYCQRLAEENHNLRCQHHQMMLERRELLA
KNEQARSRVEAMITRLKTLEQHT
>PD0857 histone-like protein
MAKIAKNVKAAPKKAVKKQTAKPATIKPIKETLSKSALVAHLAESSALAA
KDVRTLLGALENTIHASLHKKGVGSFTLPGLLKISTVNVPAKPKRKGINP
FTKEEQWFAAKPASVKIKTRPLKKLKDATL
>PD0382 phage-related protein
MNLRPYQHTIVDFILTHPRCNLFVPMGLGKTVATLTALDVLLVVEDIAPI
LVIAPLRVAATTWPDEVAKFPHLRHLRVSVVVGSAAARRHALEQEADIYC
INYDTLKWLVEFYKDRWPFRMVVADECSKLKGFRLRQGTRRARALATHVH
TKVERYVGLTGTPAPNGLQDLWALMWMVDRGARLGTHFKAFIDRWFRAMQ
IGSDPHAVRFAPTPHASQEIQDKIRDLCLSLDPQAYFDLRQPIVNTIRVA
LPAHAQRLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDD
TRQAWEVVHDAKLEALHDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRA
LDKHPDTIRDWNAGNIPVLFAHPASAGHGLNLQDGGNILAFFGHWWDLEQ
YQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDELVMARRESKREVQDL
LLEAVKRRETGKPLTSQGAMTR
>PD0804 conserved hypothetical protein
MLPFLTHQDFTAMNSSNNTPRVLFEGKYQRMIVNGTWEYSERVHPGGLAA
IILAVTPEDRIIFVEQFRIPIQQRTIEMPAGLVGDIDAGESIEQAAIREL
EEETGWTADHAEILLIGPVSSGASSERIAFVRATGLRKVSSGGGDIDENI
VVHEIPSTQAAAWLVEKMHADFAMDPKLWAALWLIDHALDGTPIK
>PD0789 resolvase/integrase-like protein
MSATRARPRLTRWPGLMPSSKNLKPLNARKCSRSKSPRWAVGKRAQLEAA
LEFLREGDVLVVTKLDRLARSVADLMQVIQTLDGKSVGLRVLNLGMDTHT
PTGKLMLTVLGGVVQFKREMMLERQREGVARAKDAGKYKGRKPISAAQKT
IHLSNDALLHFDRIHTPRALLRRSAAPPPLGWLLANAKPSTFLLLLVLPL
LPLLLSLLLNTFLMIIDSLANSRMYLPFNRFDTERTLSGKIIEIGEAFRI
IRLFTWREDWEERRTVYSTRCLLSLGPSWIVR
>PD0274 conserved hypothetical protein
MRVCGEGHVRIIGGRWRNTRLRVPELPGLRPTSSRVRETLFNWLMPVLPG
AHVLDLFAGSGALGLEAVSRGAARAVLVERHAELVVLLREQVARLGAQDQ
VEIVQADALQWLQRPAAARFDIIFLDPPFAAGVWETVVVRLAGHVAAAAW
LYMESSVDLEPVMLPGWELHRDGRTREVCYALYRYPAVTLPVGSKSVSSV
>PD1730 phage-related protein
MNLRPYQHTIVDFILTHPRCNLFVPMGLGKTVATLTALDVLLVVEDIAPI
LVIAPLRVAATTWPDEVAKFPHLRHLRVSVVVGSAAARRHALEQEADIYC
INYDTLKWLVEFYKDRWPFRMVVADECSKLKGFRLRQGTRRARALATHVH
TKVERYVGLTGTPAPNGLQDLWALMWMVDRGARLGTHFKAFIDRWFRAMQ
IGSDPHAVRFAPTPHASQEIQDKIRDLCLSLDPQAYFDLCQPIVNTIRVA
LPAHAQRLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDD
TRQAWEVVHDAKLEALHDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRA
LDKHPDTIRDWNAGNIPVLFAHPASAGHGLNLQDGGNILAFFGHWWDLEQ
YQQIIERIGPTRQAQAGHQRPVFIHHIVAAGTVDELVMARRESKREVQDL
LLEAVKRRETGKPLTSQGAMTR
>PD1137 phage-related protein
MNLRPYQHTIVDFILTHPRCNLFVPMGLGKTVATLTALDVLLVVEDIAPI
LVIAPLRVAATTWPDEVAKFPHLRHLRVSVVVGSAAARRHALEQEADIYC
INYDTLKWLVEFYKDRWPFRMVVADECSKLKGFRLRQGTRRARALATHVH
TKVERYVGLTGTPAPNGLQDLWALMWMVDRGARLGTHFKAFIDRWFRAMQ
IGSDPHAVRFVPTPHASQEIQDKIRDICLSLDPHAYFDLCQPIVNTIRVA
LPAHAQRLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDD
TRQAWEVVHDAKLEALHDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRA
LDKHPDTIRDWNAGNIPVLFAHPASAGHGLNLQDGGNILAFFGHWWDLEQ
YQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDELVMARRESKREVQDL
LLEAVKRRETGKPLTSQGAIAL
>PD1586 conserved hypothetical protein
MLNRRDCGAAVEVAARRHLERAGLRWLASNVCFRGGELDLVMYDVMSVVF
VEVRYRQQESHGSAAQSVDRRKRRKLVMAAQLFLQRHPFLAQVPCRFDVV
EGAGRPLQLHWIRDAFRLDDC
>PD1606 hypothetical protein
MGGHAQGKRPVARGDQGGVVGHRHRRPQAWRWPCPAEANARTALVGKIYS
FAVDAELIPYNSNPAVRLPRWKVPPRDRALQTGREFRVFWRMTDSDGYLT
QPRPEGRQRYAWRHPHMDPDMVQVLRLIAMTGCRIQEITALRWREVDLDE
AHIVLPSARVKNKREHMSSISGSTLAARIARQTGIGRGRVAATALYGSTP
GRLRLPLAGGDAGGCCHLCGAALVRNRQSRPIDSIEHAGFNRPFLIPEDE
RRIQFCGFNGTNAL
>PD1213 KDO kinase
MLHRIVTLERMVAFDANEILTPFCEGHREGAILFDCQRMRQVEYGLFVPA
WWGERAHPISEGGRGSAWFVEASFGNAVLRQYRRGGMIAMLNRDRYFWCG
GHRTRSVLEFRLMRELISRGLPVPTPLAACYVRHGVQYRAAILMERLEGV
SSLAMCVRGNSKEIHWEQIGRMISRFHREGLDHADLNAHNILLDQAGQCW
LIDFDRGALRIPATKWREHNLARLLRSLLKIRGERSVDAVYRDFERLCRA
YDLAWGRGC
>PD0939 phage-related protein
MSRRSSSSDSAVYVNFLERERRADVEKAARLYETRRDRVEPSYVFPAPSG
EKRVGPNSNTGQKGVVGSYPVSIDYLTVVFSYARLAEAGYFDEPRFLLYL
LFGLSVDDVIVGSHTSVRWHFYNSSASIIDSNGDLVGKIGWDGNADSYCI
SLTGSACRYIHDWSKVKRSLASLDARITRCDVAYDDYDGILGTVRHHEAL
AREHLAPAGGCLLFSSGGTPPRTRFLDDHGGGSGCTLYVGQRGHKQLCIY
EKGKQLGVAESPWVRYEVRLYAKHAVIPFDLLEEPMRYLRGSYDYLCQLF
SSVVVSPVSRIRTVVKHVEATGEALVRWLRRQVGPALGVLRQALGCGFSD
FIVDRVEREGLPSRFRRICRGGDLLAYLRETLIDCSVGVCV
>PD0835 conserved hypothetical protein
MPATLKEFQETLCAGIVARFNQVRRLYEQLAGAPPEQWTQARCNDAVTVL
CAPTGAGKTLIAVETMRRVSATGERVLWFWFAPFSGLVEQSRQVIAAQAP
ELDVFDLQSDRCWETVRSGGVFVVTWAAVAVRNTEGRRARTHGDSGMSLD
VLLALAREEGVRIGCVVDEAHHTALSGHQARLFFQSVLAPDYALLMTATP
RDADVMAFERATGYMVGQAAEWAMVSRFDAVQAGLLKYGVRMVRFIAQDG
DAAQLIDFEHLALRQCAETHRMIKRLLADAGVALTPLMLVQVPDGRAAQD
EARRFLTEQLHFDHEAVRIHTADEPDPALLSLANDPTVEVLIFKMAVALG
FDAPRAFTLAALRGARDPAFGIQVIGRIVRKHALLQGRVTLPESLDYGYV
FLSNAQSQEGLLDAGQQINTLTTQSPELGTQTVVTVIGEHSHVQVVRSGE
PLSLLVSPQGVALDAVERTSQMAPDALGDPLIEEGWEPWTRAAQGILEWV
GAQPGHPRKDAAASTTSTVNALLCMGQGVLKHYRRREDAPAMLRSERLPD
PPADFEAQLMDFIDFNDTVLASRFRVRERVMRVESALFSGVQHSEEECQT
DLWATLAPVAVAEKAEQIRLRLSEANDRELQLRLLEKFRQAIEQSGSEPP
EDEELLLQQLELVLIRHPGLLRVAYRRFRHAQVADVAVPLPAELHSDMPL
QRAQRGLYGVFPQGLNQDETAVAQQLDASPLVHWWHRNPVRRPESVALYR
WDDGEGFYPDFVVAMTQRNTHGQIALLEVKGAHLWGEPREVEKAAAVHPE
YGRVFIVGRQRGERVFHHLRVLEHRLETDGVFTLDRLRHV
>PD1429 DNA helicase
MQARSSAYARYWRHSLADSGTDRGVLRDAADSSFLEVSKQQLESGCVDRD
IVAACFNKEAEQVQTVEVVIRLKVYVLLLQHGTPQRAGHPKIVTPLVTQA
LLARDGRIYPLARTMIPRDILKPLVGGHFAIGTVSDQDAFLTRQPVPGIA
FTGTENNADSLGDSNNADFDRQWKQFLAGCDRLLAEVGGGWPGAQGDYLE
ADYGYLTKKAAFSSRHILALYDHLLLETTPQVPLFERYASGEMAPPELCL
PPHAGFSQRLAHGSDKRALSRTQRDALTHLLVARQGEILAVNGPPGTGKT
TLVLSVVASLWAHAALAGGEPPVIVAASTTNQAVTNIIDAFEKNFAKGEG
PFAGRWLPKIKSFGALLGSADKESKTADKYHTEDFFNAVESVGYIAEAEQ
HYLRAAAAAFPEIPQASFNVKGVTAALQEAIRKEAATLAAIEQAWSGLND
ARDALRAELGETPATTMTQRRTQRDAAQAEKQVIETLITQWERYGADESL
VYGLFSWLPAVAKKRMRLVRVFLNSIWPVHYPTQTWESIEQVDGWLSGMQ
RQCDDRLQEHSWAVTRGEKVLHEEQCHITTWQAALAKESALTGLMEAAGQ
VSLADCDALADTSIRFRIFLLTTHYWEGRWLSEMQAQLPADLDGEKKKTG
GTAVEPRWRRRMKLTPCIVSTLFMLPKKMQVARRDEKNFSRNYLYDFADL
LIVDEAGQVLPEVAGASFALGKQALVIGDQLQIEPIWSIPESIDIGNLHA
AELLGKEEDAYERLCQSGRSAASGSVMQIAQRLSRYHYDPEMARGMFLYE
HHRCFDEIVSYCNALCYQGKLIPKRGPKVAALKNAAGKETGDGLPALGYL
HVDGLCQKSSGGSRHNLYEAQTIAAWLAEHRESLQAQYGKPLHCIVGIVT
PFGAQVRAISQACRDVGIEVGHEKDGITVGTVHALQGAERPVVIFSAVYS
KHADGGFIDQRTSMLNVAVSRAKNTFLVFGDMDVFTAAPKSRPRGLLAHY
LFKDASNALCFQPLVRKDLQQVSTAVEVLQDAAEHDAFLLKALNKVQREI
HIVSPWINKDRIQDIGAFKAMQEAVKRQVQVTVYTDQDLNTDDKKDIKKI
TKVLQAARALRGVGIEVNFVDRVHSKMVIGDDEVFCVGSFNWFSANRSAM
YAKHETSLVYRGRGLADERQTRLNSLRQRITDDPQQIGQA
>PD2023 conserved hypothetical protein
MRCWFPVWVDDVRFFVSCAKGLEYLLVDEVLALGAAGATATVAGVNVEGG
LCDAQRLVLWSRLASRVLWPLAAFACADEDALYAGVAALPWVEHVLPGQT
LAVDAHVSGEAITHARYAAQRVKDAVVDTLRDAGVVRPSVDVEHPDVRLN
LSLRKGRATLSVDLGGRALHHRGWRQAPHAASLKEHLAAAVLLRAGWAKV
YAEGGGLLDPMCGSGTLLIEGALMVADVAPGLSRYADPDAMSHVSVAERP
VLLPSRWRGFDVVAWEALVVDAQQRARRGLAELRPVLHGSDIDPRALGAA
FANARAAGVQDAIEFVVAGIDVLPAVSEPHGVVVCNAPYDVRLAADPGLY
RHLGDALRRVVPRWRAALVCGSSTLAFATGLRADKKYQFFNGALECVLIV
CDPVVPLAREAGGAQALSEGAQMAANRLRKNVQRLKKWRIRAGVECYRVY
DADLPEYAAAIDVYQEVDGARRLFLHVQEYAAPASIPEGDVRRRRHELLA
AVRAVFDVSVAQVALKTRQRGKGGSQYGCFAQRGEFFHVCEHGALLRVNL
FDYLDTGLFLDHRPLRGRMAREAVGKRFLNVFCYTGVASVEAAVAGAAAT
TSVDLSSTYLHWCTDNFALNGQGGVRHRLVQADALAWLEAERGQYDVIFC
DPPTFSNSARADDFDVQRDHVRLLRAAVARLTPGGVLYFSNNFRRFRLDV
DAVAAFAQCEEISPVTIDLDFSRNTRIHRTWLLWR
>PD0712 transposase
MAESINRLYKTEVIHRRSWKNWTKVELATL
>PD1415 conserved hypothetical protein
MMTSLDFYFDQATLDRANTYRNAGNDWAMYHTLSDAVKAGGGDARLANGL
KNAGDIHYAQDRDAPSIRTVMDQVDHKVNKIKTQHHPAAV
>PD0572 alkA, DNA-3-methyladenine glycosidase
MAAYDYLYHCDPGLSGWMQRLGPLPALRRWRQPFNVVDALARAILFQQLS
GKAASTIVARIEAVIGSTCLYAETLACIDDACLRACGVSSNKILALRDLT
RREVAGELPSVWQMGSMHHNTIVEKLIPIRGIGRWTVEMMLIFRLGRPDV
LPVDDLGVRKGIQRVDSLAFVPTPKALCTRGECWAPYRTYAGLYLWRIAD
FHEGERAVISDRSQDE
>PD0550 alkB, alkylated DNA repair protein
MLGGFVMDLFPFLPGVRISLQSGWLPSGAADALLAGLLEGVPWEVHRIHI
FGREVNSPRLSCWVGDPQASYRYSGRCFQPRPWWPALAELRMCLEGETGA
VFNSVLLNRYRHGGDAIGWHSDDEAELGIDPLIASVSLGASRRFVFRHRR
ERHLRAECVLSHGDLLLMGGTTQRDYQHALPRTLRVVGERVNLTFRRILM
>PD1558 comE, DNA transport competence protein
MKSFAMRLKSLLLLFVLAFTVHAANKVDINTASAEEMDKVLVNIGPSKAS
AIVKYREENGPFKSVEELALVKGIGMKTVERNRDLIEIGTRMAPAKHAKG
TELKSVGKR
>PD0577 dcm, site-specific DNA-methyltransferase
MSRHPRRPKNIPNIVGVDLFCGVGGLTHGLARGGISVAAGIDIDPNCQFP
FEANNAALFLECDVARLKAAAVRGFYQAADITLLAGCAPCQPFSAYSRSR
RNNAYASQWPLVLAFARLVKQLKPDLVTMENVPQLVNHTVFQQFLKSLSG
YKTWWHIVECASIGVPQTRKRLVLLASRLGSQGLELSQQHVPRMTVREAI
GSLPPIHAGERDPQDALHTAASLSALNMSRIRASRPGGTWRDWPAALRAA
CHCKDTGATYPSVYGRMEWDQPAPTITTQCFGYGNGRFGHPEQDRAISLR
EAAILQTFPKSYRFAPPGAPITVNTMGRLIGNAVPVRLGEVIARSLVRHV
QGYMG
>PD0205 deaD, ATP-dependent RNA helicase
MLSGVLMSNPSSTPLLFADLGLSDAVMQAVTKIGYETPSPIQAATIPALL
AGRDVLGQAQTGTGKTAAFALPLLTRTVLNQVKPQVLVLAPTRELAIQVA
EAFQRYAASISGFRVLPVYGGQSYGQQLAALKRGVHVIVGTPGRVIDHLE
RGTLDLSELKTLVLDEADEMLRMGFIEDVEEVLRKLPASRQVALFSATMP
PQIRRIAQTYLQDPIEVTIATKTTTAANIRQRYWWVSGLHKLDALTRILE
VETFDAMIIFVRTKAATEELAEKLQARGLTAAAINGDMQQAQRERTIHQL
KDGKLDILVATDVAARGLDVERISHVLNYDIPYDVESYVHRIGRTGRAGR
SGEAILFVTPREKGMLRQIERATHQPIEAMQLPSVDAVNDTRVTKFFGRI
SNALVVGAEIDFYRKLLQRFESEHNVPAIEIAAALARLLQGDSPFLLSVP
TRPQRERSELASEHHVKRPSSFKQTERPNNTEHPKRPQRNAPARNVPEFG
MESYRIEVGRMHGVKPANIVGAIANEAGLESRYIGRIDIRDDHSVLDLPA
EMPHEILQHLKKVWVSGQQLQMRRIDTTETTAPAREFKSKPGGAGKFPPK
PHHNKSTKPKPPYSG
>PD1099 dinJ, DNA-damage-inducible protein
MSANAVVRARVDAHIKEEASTVLATMGLSVSDAFRMMLTRIAREKALPFE
PLVPNETTIAAMREARAGHLKSFDSIEALMADLHAED
>PD0001 dnaA, chromosomal replication initiator
MESWSRCLERLETEFPPEDVHTWLRPLQADQRGDSVILYAPNTFIIELVE
ERYLGRLRELLSYFSGIREVVLAIGSRPKTTELTVPVDTTGRLSQTVPFN
GNLDTHYNFDNFVEGRSNQLARAAAWQAAQKPGDRTHNPLLLYGGTGLGK
THLMFAAGNVMRQVNPTYKVMYLRSEQFFSAMIRALQDKSMDQFKRQFHQ
IDALLIDDIQFFAGKDRTQEEFFHTFNALFDGKQQIILTCDRYPREVNGL
EPRLKSRLAWGLSVAIDPPDFETRAAIVLAKARERGATIPDEVAFLIAKK
MHSNVRDLEGALNTLVARANFTGRAVTIEFSQETLRDLLRAQQQTIGIPN
IQKIVADYYGLQIKDLLSKRRTRSLARPRQLAMALAKELTEHSLPEIGDA
FAGRDHTTVLHACRQIKLLMETETKLREDWDKLMRKFSE
>PD1701 dnaB, replicative DNA helicase
MSARPGFHSNYQREPGDREALRVDPLRVPPHSVEAEQAVLGGLMLAPDAL
DKINDRLTENDFYRRDHRMIYRAICDLSRKMRPFDVVTLGEWFESQGMLE
VVDHGAYLIELASTTPSAANIVAYAEIVRDKAVLRQLIEVGTKIVNDGFQ
PEGRESIDLLAEAEKSVFGIAETGARGRIDFVAMPGALKDAFEQLRDRFE
NGSNVTGLPTGYNDFDAMSAGLQPTDLIVLAARPAMGKTTFALNIAEYVA
IKSKKTVAVFSMEMSAAQLAMRLISSNGRINAQRLRTGQLEDEDWARVTG
AIKMLKETKIFIDDTPGVSPEVLRSKCRRLKREHDLGLVVVDYLQLMSVP
GNSENRATEISEISRSLKGLAKELNVPVIALSQLNRSLETRTDKHPVMAD
LRESGAIEQDADMIVFIYRDEYYNKDSPDKGLAEIIIGKHRSGPTGSCKL
KFFGEYTRFDNLAHDSIGTFE
>PD0165 dnaE, DNA polymerase III alpha chain
MSTSSFVHLHIHTEFSLADSTIRVPEKPEQAHPKKAKQANLLSRAVELGL
PALAVTDLNNLFALIKFYKAAETVGIKPISGADLLIAEPEHPPWGMTLLC
RDHAGYLNLSQLISRGWLEGHRPEGGVAVHPDWVRDHHKNLFALIGRHSL
AGQLLAKGRADLAEQQLADWQHVFGDGLHLELTRTGRDGEEPFNQFALQV
AGIRGIPVIASNDVRFLVQSDFLAHEARVCIASGRMLDDPKRPRTYSEQQ
YLRSSEEMAALFADIPDALDNTRTLAQRCNIEMRLGTYFLPNYPVPNDET
LDSWIRKQSHEGLEARLLKHPLAPGQTREDYVTRLEFELDTIIKMGFSGY
FLIVADFIQWGKQQGIPIGPGRGSGAGSLVAWALLITDLDPLPYNLLFER
FLNPERVSMPDFDIDFCMERRDEVISYVARKYGRERVSQIITYGTMAAKA
VVRDVGRVLGFPYGLVDSVAKLIPSTLGITLKDAMGEGETNDNASAELIQ
RYQAEEDVQELLNLARQLEDLTRNAGKHAGGVVIAPNPLTEFCPLFAEHD
ENGRGKNPVTQFDKNDVEEVGLVKFDFLGLRTLTIIDWAVKAINKRHARA
CIDPVDITALPLDDIPTYKDVFASGNTSAVFQFESSGMRRLLKDARPDRF
EDLIALVSLYRPGPMDLIPEFTARKHGVQETIYPDPRTKNILKDTYGIMV
YQEQVMQMAQIVGGYSLGSADLLRRAMGKKVPAEMAKHREIFREGAAKGG
MDAVKADEIFDLMEKFAGYGFNKSHAAAYALVSYQTAWLKRHYPAEFMAA
TLSSDMDNTDKVVGFLDEARNLNLKVLRPNINHSAYMFEATHADTIQYGL
GAIKGVGQSVCEAIVKERLHYGPYTSLLDFCTRVTSAKLNRRALEAMIHA
GALDELGKNRASVMLQLPEVIKATEQMSRERESGQNSLFGNADPGTPVIQ
LDLPECEEWPLTRMLNGERETLGLYFSGHPFDPYRKQVKELVGCDLNTSA
LERILGSQQRGNGEKRTWQPEVNTILAGLVVSVRRKGDSQVFVQLEDGRG
RIECSAFSDALAEFGHLLTRDRILIVKGGLREDEFNGGYSLRIRQCWDYA
QLCTDYAQRLLLRVDLRTSHAWERIDAILARYRPGNTPLRLDLLLNSTHG
PVAGTLDLSGGQSVRIEQSLLDKLQKDPAVSKLKVKYTPPWVQ
>PD1647 dnaG, DNA primase
MARIPDAFIDELLARTDIVEVVGSRLPLKRQGKEYASRCPFHDERSASFY
VSPTKQFYHCFGCGAHGTAINFLMNYDRLEFLDAVDELAKRAGMEIPRET
QQKHAHQDDSRPLYAALEAASHFFQKHLENNPKVQAYLNERGVDINTRTR
FQIGYAPDGYSVLKDTLGTDERRITLLDRAGMLSKNDRDHVYDKFRDRVM
FPIFDRRGRVIAFGGRVLDKDKSPKYLNSPETTLFHKSRELYGLWQVRQA
HQNIERLIVVEGYMDVISLFQFGITQAVATLGTATTVEHAELLFRNTPDV
YFCFDGDNAGRKAGWRALESILPRMKEGRQAFFLFLPDGEDPDTIVRKEG
KNAFNERLKQAIPLSQFFFDTLSSDIALHTLDGKARLAERARPLLMKIPE
GAFNDLMRQRLAHLTGVNIAHPGPATAATSRPATRLTAQKRNLIHTTIAI
ILQQPSLAMTLNTPYPLAINDLKQPGIALLLELLDLIHQRPEITTGALLE
HFTEREEYVLLQTLATQTMPGDTATWTQELQGAMTQMQKQLLQQRLNALH
TKQLTQPLDDIDKYELRELLKNRTTLR
>PD0002 dnaN, DNA polymerase III beta chain
MRFRLQRETFLKPLAHVVNVVERRQTRSILANLLIKVNEDQLSLTGTDLE
VEMISKTKIEDPESGEITIPARKIYEIVRALPDASQLSVYQSDDKITLQA
GRSRFTLATLPANDFPSIDKIEVTERIIIAEVLLKELIERTAFAMAQQDV
RYYLNGLLFDLRDTKLRCVATDGHRLALCETELEQAKDLKRQIILPRKGV
MELQRLLEGSDRQIELEIARNHIRMKSFDVTFTSKLIDGSFPDYEGVIPI
GADREVKVAREVLRDALQRAAILSNEKYRGVRIEVSPGQLKINAHNPEQE
EAQEEIEAQTIVDGLAIGFNVNYLLDALSSLRGDFVNIQLRDSNSSALIR
ESNSEKSLQVVMPLRL
>PD1217 dnaQ, DNA polymerase III epsilon chain
MRNKKRQIVLDTETTGLEWSKGNRIVEIGAVELLDRRLSGDKFHRYLKPD
VSFESGAQEVTGLTMEFLADKPEFSMIADKFLAYINGAELIIHNAAFDLG
FLDYELSRLGSQYGKITDRASVLDTLVMARERYPGQRNSLDALCKRLGVD
NAHRQLHGALLDAQILADVYIALTSGQEEIGFALPESSRGGVDAASVAFM
PDVLLTRPCVVASQSELEAHEARLAKLRKIAGHVLWDAI
>PD1059 dnaX, DNA polymerase III subunits gamma and tau
MSYLVLARKWRPKRFAELVGQEHVVRALSNALESGRLHHAFLFTGTRGVG
KTTIARIFAKSLNCEQGTSADPCGRCTACLDIDVGRYIDLLEIDAASNTG
VDDVREMIENAQYMPSRGKFKVYLIDEVHMLSKAAFNALLKTLEEPPPHV
KFLLATTDPQKLPVTVLSRCLQFNLKRLDEEQIQRQIAKILTAEQITADD
TAIIELSKAADGSLRDGLSLLDQAIAYAGGTLREGAVRDMLGTVDRTQVE
VMLAALIAGDGDRLLRVIATLAEFSPDWGGVLEALAEALHRIQVQQLVPS
VVFAGDGLNVALLAEQTQPEVVQLWYQMAINGRHDLHLAPSPRVGFEMAV
LRMLAFRPVPVVVPGMVSTEGQGQSVNAPLMASVGRNAHGANGYTMSQSR
SDLQKVRVGSLDGKITDVGQWLALVERIELSGPSKQLAAHAAFVSHENNV
LSLALAPEFEYLQSTRSVADLTQGLTRLLGQAPEVKIEARNIQVETLHER
TYRQKSERQQLAEEAFMSDHVVQHLIYQQAAKVVTDSIRPYDE
>PD1339 dpnA, DNA methylase
MIVASSAAYRLHEGDALRLLCDIDSASVDAVITDPPYCSGAMRMADRFKP
TKRKYINNGTKHVAPDFDCDFRDHRGFLAWSSQWLSECRRVTRPGGVLLV
FTDWRMLPTLTDAVQSAGWAWQGIVVWDKTPACRPQLGRFRSQAEFIVWA
SCGLMNPKAHPVTPVGVFSTGTAAREKRHQVGKPLALMEHLVKIVPPAST
VLDPFAGSGTTGVAALRAGHRFIGMVIGMEMSRFKYV
>PD1727 dpoL, phage-related DNA polymerase
MATAQPPAPILWGDLETYSPVPIAHGVHAYAEQAQLLLFAYALGEGPVQV
WDCTATATMPEELSAALHNPAVLLYFHNSHFDRTVLRHCGISIPLERWRD
SMAQALAHALPGALGTLCELLRVPVEQAKAKDGKRLVALFCKPRPTHCTL
RRATRDTHPTEWAQFVEYARRDVTAMRDVVKRLPSHNYTGAELALWFLDQ
TINDRGVLVDTDLAQAAIGAVERAKQALAERTSDLTAGVVQAATQRDALL
HHLSTAHGVALPDMQQHTVERCLDDPLLPETVRELLSIRRQASTTSTAKY
QALLNCTSRDGRLRGTLQFNGASRTGRWAGRLFQPHNLPRPTLSQEAITV
GIDAMKAGCVDLVFDDVMALTSSALRSCLIAPTHKKLVVADLSNIEGRVL
AWLAGETPKLHAFGEFDTCQGVDGTWHSGEAITHGALRGAPIALQWNAEH
APIRKGDDIYKRAYAHSFGIAPQAVTKQQRQIGKVQELALGYGGGVGAFA
AFAAMYHIDLEAMAAQAALPPLLLQEATELLEWTKANHRPTFGLSDRAWL
ACDVFKRAWRNAHPAIAAFWQALQCAVTDAIGHPETAHTCCGITVQYSRA
WLRLRLPSGRVLYYAAPRVDEHGALSYMGTHPVTRKWTRITTYGGKLVEN
ITQAVSRDVLAACMPAIEAAGYSIVLTVHDEIITEADDNAAFNAAHLAAL
MATPPPWAQGLPLAAEGFETHRYRKQ
>PD1134 dpoL, phage-related DNA polymerase
MATAQPPAPILWGDLETYSPVPIAHGVHAYAEQAQLLLFAYALGEGPVQV
WDCTATATMPEELSAALHNPAVLLYFHNSHFDRTVLRHCGISIPLERWRD
SMAQALAHALPGALGTLCELLRVPVEQAKAKDGKRLVALFCKPRPTHCTL
RRATRDTHPTEWAQFVEYARRDVTAMRDVVKRLPSHNYTGAELALWFLDQ
TINDRGVLVDTDLAQAAIGAVERAKQALAERTSDLTAGVVQAATQRDALL
HHLSTAHGVALPDMQQHTVERCLDDPLLPETVRELLSIRRQASTTSTAKY
QALLNCTSRDGRLRGTLQFNGASRTGRWAGRLFQPHNLPRPTLSQEAITV
GIDAMKAGCVDLVFDDVMALTSSALRSCLIAPTHKKLVVADLSNIEGRVL
AWLAGETPKLHAFGEFDTCQGVDGTWHSGEAITHGALRGAPIALQWNAEH
APIRKGDDIYKRAYAHSFGIAPQAVTKQQRQIGKVQELALGYGGGVGAFA
AFAAMYHIDLEAMAAQAALPPLLLQEATELLEWTKANHRPTFGLSDRAWL
ACDVFKRAWRNAHPAIAAFWQALQCAVTDAIGHPETAHTCCGITVQYSRA
WLRLRLPSGRVLYYAAPRVDEHGALSYMGTHPVTRKWTRITTYGGKLVEN
ITQAVSRDVLAACMPAIEAAGYSIVLTVHDEIITEADDNAAFNAAHLAAL
MATPPPWAQGLPLAAEGFETHRYRKQ
>PD1322 dpoL, phage-related DNA polymerase
MDWAQFVDYARRDVAAMRDVVKRLPSHNYTGAELALWFLDQTINDRGVLV
DTDLAQAAIGAVERAKQALAERTSDLTAGVVQAATQRDALLHHLSTAHGV
ALPDMQQHTVERCLDDPLLPETVRELLSIRRQASTTSTAKYQALLNCTSR
DGRLRGTLQFNGASRTGRWAGRLFQPHNLPRPTLSQEAITVGIDAMKAGC
VDLVFDDVMALTSSALRSCLIAPTHKKLVVADLSNIEGRVLAWLAGETPK
LHAFGEFDTCQGVDGTWHSGEAITHGALRGAPITLQWNAEHAPIRKGDDI
YKRAYAHSFGIAPQAVTKQQRQIGKVQELALGYGGGVGAFAAFAAMYHID
LEAIAGYYPPPISTHETAPPHQPHHRH
>PD0128 exoA, exodeoxyribonuclease
MRISSFNANGLRSALSKGFFDWFSTQDIDVLCVQEIKAQRHQLVGPDFFP
AGYHVCFRDATIKKGYSGVAIYSRCEPDELRTTLGWAEFDEEGRYVEARF
GNLSVVSFYIPSGSSGEKRQHYKFEVMRWLRPILCEWLLSGRDYVLCGDW
NIVRSALDIRNWKSNQKNSGCLPLERDWLNGLCADSLHDVNSAQGRGWVD
TYRVLHPQGEDYTWWSNRGAARVNNVGWRIDYQFVSPGLRERVSRCAIYC
EQRFSDHAPYTVEYVL
>PD0811 fis, DNA-binding protein
MNVVPSRPEVSRGSPKSPLREHVAQVVRRYLRDLDGCDANDLYNMVLREM
EIPLLVEVLNHCEGNQSRAAALLGIHRATLRKKLKEYGLV
>PD1935 gyrA, DNA gyrase subunit A
MAETAKEIIKVNLEDEMRKSYLDYAMSVIVGRALPDARDGMKPVHRRVLY
AMHELGAHSDKSYFKSARIIGEVLGKYHPHGDQSVYDTLVRMAQPFSLRY
LLVEGQGNFGSVDGDPAAAMRYTESRMSRISHDLIADIDKETVDFQPNYD
EKETEPTVMPTRFPNLLVNGSSGIAVGMATNIPPHNLVESINACIALIDN
PELDIDGLMEYIPGPDFPTAGIINGTAGIVAGYRTGRGRVRMRAKADIEV
ADNGREAIVVTEIPYQVNKARLIEKIAELVKEKRIDGISELRDESDKDGM
RIYIEVKRGESAEVVLNNLYQQTQMESVFGINMVALVDGRPQLLNLKQIL
QAFIRHRREVVTRRTIFELRKARARAHVLEGLTVALANIDEMIHLIKTSP
SPQEAKERLLAKTWAPGLVGTLLSASGGEASRPEDLPQGVGLIGDSYQLT
EVQVRQILEMRLHRLTGLEQDKLAEEYQQLLEIIVGLIRILESPDVLLQV
IRDELLKIREEYGDVRRTEIRHSEEDLDILDLIAPEDVVVTLSHAGYAKR
QPVSAYRAQKRGGRGRAAVTTKEEDFIDHLWLVNTHDTLLTFTSTGKVFW
LSVYQLPEAGSNARGRPIINWIPLEPGEKVQAVLPVREYAENHYVFFATR
QGTVKKTPLSEFAFRLARGKIAINLDQGDALIGVALTDGERDVLLFASNG
KTVRFSENTVRSMGRTATGVRGIKLTEGEEVVSLIIAEPATGVDMLEEAE
ETADDDIQTANTAESVHIDPTQDDILCILTATENGYGKCTPLAHYPRKGR
GTQGVIGIQTTERNGRLVAAVLLGATDEVLLISDGGTLVRTRGSEISRVG
RNTQGVTLIRLSNGEKLQAVERLDASLSIPDETEDDPGTVHPA
>PD0005 gyrB, DNA gyrase subunit B
MTEKQNTSLLSNGGIYDSSKITVLRGLDAVRKRPGMYIGDVHDGTGLHHM
VFEVVDNSVDEALAGHADSILVKIHIDGSVSVSDNGRGIPVDIHKEEGVS
AAEVILTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSERLWLDIWRDGY
HYQQEYVLGEPQYPLKQLEVSAKRGTTLRFKPAKEIFSDVEFHYENLAKR
LRELSFLNSGLKVSLIDERGEGRRDDFHYEGGIRSFVEHLAQLKTPLHPN
VISVTGEHNGIVVDAALQWTDAYQETMYCFTNNIPQKDGGTHLAGFRAAL
TRTLGNYIEQNGVARQAKITFSGDDMREGMIAVLSVKVPEPSFSSQTKEK
LVSSDVKPAVEATFGLRLEEFLQENPNEARAIAGKIVDAARAREAARKAR
DLTRRKGVLDIAGLPGKLADCQEKDPAMSELFIVEGDSAGGSAKQGRNRK
NQAVLPLRGKILNVERARFDRMLSSAEVGTLITALGTGIGKDEYNPDKLR
YHRVIIMTDADVDGSHIRTLLLTFFYRQMPELIERGHIYIGLPPLYKLKQ
GKSELYLKDDIALNVYLANSAVEGAQLLPAEGEPPIEGLALEKLLITYIA
AKDTIVRHSHRYDSRLLEALLEFTPLDSTCFQSYSDSEHLQSLMALLNQS
SLGAPRYILKMQFPDEQHSAALLATRYHMGEELTQVLQLSALETGELRPL
YEAAKLLHGLIRNGAKIVRGTKSQSIECFGDAQAWLLEEAKKGRQIQRFK
GLGEMNPEQLWDTTVNPDTRRLLQVCIEDGIAADQIFSTLMGDVVEPRRG
FIENNALKVTRLDI
>PD1910 himA, integration host factor, alpha subunit
MALTKAEMVERLFDEVGLNKREAKEFVDAFFDLLRDALEQGKEIKLSGFG
NFELRCKNQRPGRNPKTGEEIPISARTVVTFRSGQKLKERVDAYVGSRQ
>PD1455 himD, integration host factor, beta subunit
MTKSELIEILTKRQAHLKSDDVDLAVKSLLEMMGGALSGGDRIEIRGFGS
FSLHYRPPRCGRNPKTGESVALPGKYVPHFKPGKELRERVASVVPLGECG
DITE
>PD1232 holA, DNA polymerase III delta subunit
MELRPEQLANLPANQPLEPAYLIAGPETLRLVEAADAIRTRARADGITER
EIFDVESRDFDWQQLASSFNAPSLFSSRRLIEIRLPGGKPGKEGSEVITR
FCATPSSDVILLITCNEWSKAHHGKWTDAIARIGKIAIAWSIKPHELPDW
ITRRLHSKGLRANTDVIHRLSTRLEGNLLAAAQEIDKLALLNQGPLLDLE
TMESFVADTARYDVFRLTEAMLSGQPTATIRMLGKLRAEGEAVAALLPIL
IKELIRTTTLSWVKHDNGNLAAEMKAQGIWETRQAPFKRALQRHTSPYKW
EHFVAEVGRIDRITKGRNDGNAWLSLERLMVAVAEADATRLLA
>PD1498 holB, DNA polymerase III delta subunit
MNGVDCLGNSWMMSALTPWQQRAYDQMVAALDAGHLGHGLLLCGPEGLGQ
RAVSLAFADTVLGKGLTEVARQRCRQLITAGTHPDLHLVSFIPTKTADKL
RTEIVIEQIRDLSEKLVLTPQYGQAQVVIIDPADAINPAACNALLKTLEE
PASGCYLWLISPQPARLPVTIRSRCQRLEFKLPPLHEALAWLVAQGITEK
VAVEALDAARGHPGLAMQWLCDEGMALRRRVAVELEQLASGQMSAVKLAQ
QWTADGKAEQRLYHAADLAFMQATSVLTDPSRLHKLATWFDAVNRTRDLL
RTTVRADLAVIELLLAWRTRWEC
>PD0104 holC, DNA polymerase III holoenzyme chi subunit
MARADFYLIAKPRFLEKPLQLVCELVRKAYDTHQPTLILARDQAQAEALD
DLLWAFDPDAYIPHQIAGSDEDDDITPVLIATPDSDTPSRPLVINLRDAP
WDGPCERVLEVVPADPAAREPLRERWKHYKARGLHMNKHDM
>PD0619 hrpA, ATP-dependent helicase
MYCHAIFCNLRLMSVIEQNILGQLRQHRRAIDDAMTRDRGRLLGLWSRWQ
SQPHDHEARANFQRVLSASRAQRQVRENNQPVVTVDTRLPIAQEAERIVA
LIRAHPVVIIAGETGSGKTTQLPKLCLSAGRGIAGTIGCTQPRRIAARAV
ATRVAEELQTPLGMVVGFQVRFTEKVSDASRIKFMTDGILLAEVASDRWL
SAYDTIIIDEAHERSLNIDFLLGYLKQLLKKRADLKVIVTSATIDTARFS
KHFDDAPVIHVAGRTYPVEVRYRPLDAMWASDDRLGEAYGGTESLAVNRW
AGGSEGDGALSKPIVALPQEDQRTVNDAIVAVIDEITREDPHGDVLVFLP
GEREIRELYRVLERRKYRETELLPLYARLSARDQDRVFNPGSGRRLVLTT
NVAETSLTVPRIRYVIDPGYARVKRYSARQKLDRLYIEPISQASANQRAG
RCGRIADGVCYRLYSEEDFLARSAFTDPEIRRSSLAGVILRMLQLGLGRI
GGSAASLSEPVSGPEQQRTSWIIESFSFLEPPDERAVADGWQQLVELGAV
DSQHVLTAIGREMARLPVDVKSARMLVAARQHGCVHEMTVIAAFLGVQDP
RERPPEAREAADNAHAKFADARSEFVGILRLWEAYRQIRGHMTQSKLRQW
CQRHFLGFLHMREWCELQLQLSLLCAGEQAEQPRKGRAAAAFPKEGCLPS
QRSKPGAEVGKGNELPSSATVLQALLAGQGTSTQSEHRGNTPSRGQLHRA
ARLARERSAVLKVTHNTQSVKAVAGQSVSHAGMQAQFAVPPNDAPHIGER
ERAAAYQALHRALLTGLPIQIGHRTEKGDFQAPRQRRFMLFPGSMLAKKP
PPWVLAANLLDTQKVWGLTNAAIEPDWVIAELPHLLMRKHFNPHWSRTQG
RVLVSEQISLFGLLLAPKKPMHYGRIDPVAAHDLFVRQGLVTGEINTRAG
FVADNLKVLEQAHEEEAKLRRAGIVADEDWQARWYFDRVPSDIHTADALD
SWWKGLPVEKRHGLYWSLIDLLPGEGGEEDRYPKYFALGDVRLPLHYSFD
PGAVDDGVTLEVPLHLLNALDPVRLSWLVPGFVADKAAALIRSLPKALRR
SYVPAPDFARAFAQAFQQPSADEMRGELARFLSRITGVRVAAIDFDEQTL
EPYLHLRVRLYDESGQVLAESRDFDALRARFGSYSGEAFVARAGRTLIME
ELREFPAVSIPLQLTGEAGVPMYPALVDDGEMAALRIFADPTEAAQVHPH
GVRRLLEIALANKIKQARKQLPVSSKSGLLYAAIESKECLRDDLVKAALN
AVLAHGLESIRDPVAFAQCRDVAAQQLFSEAMARLSLAEEILAAVAELKP
LLEAPLMGWARGNLDDMERQLAQLVYPGFLRQTPADVLTQYPRYLKAMMM
RSERAKRDPSRDQARMLELKPFLDALEVAMAQGVSDTPGWETLRWDVEEL
RVSLFAQELGVRSGISVKKLAQRLAALR
>PD0505 hrpB, ATP-dependent helicase
MCRMNHHALPIDALLPAITTSLSNHPRLILEAPPGAGKTTQVPLALLDAP
WLNGRSIILLEPRRVAARNAALFMARQCGEEVGGLVGYHIRFESKVSART
RIHVVTEGILTRIIQDDPLLDGIGALLFDEFHERHLASDLGLALALDVQT
QLREDLRIVVMSATLQGQRLAQFLDAPRLTSEGRAYPITITHFPARRDES
LETQASRAIQHALDTHQGDVLTFLPGQREIARLQAILEKTLSPELHVMPL
HGELPLQEQTRVLEPDQHGRRRIVLATNVAESSITLPGISVVIDSGLARE
PAYDPNTGFTRLDVVSITQASADQRAGRAGRLAPGWAYRLWPQSQRLEAQ
RRPEIIQTELSGLALELTAWGSSTLRFIDPPPSGALSAARELLQRLGAIS
NTSTLTPLGKRMLALGIHPRLAAMLLAPHDPQEQALACDLAALLDARDPL
RGSGDALISRWRALAELRSGCLPHDTKRSTLKAIDATTHQWRRRIRCDAT
PPDAIEAHTLGNLLTYAFPERIAARHSSDPLYYVLANGRRMRLLDNSALH
GEPWIIASELHHGIKDIQLLCGAPLDERKLHADFPERFIQHDVIRWETDK
RALVAQRESCFDRIVLDVRPAGRIDPVQAANVLTGAVRTLGLDTLSWTEH
LRQWQARAVALRHWIPELELPDLSNTTLLATLDTWLRPAFAGKTRLDALD
EAAFEQAVKSLLSWTQHALIDRHVPAHIIVPSGMGRHIDYGLADDGTPQP
PVLSVKLQELFGLPDTPRIAKNRIPLTLHLLSPGGRPLQVTQDLKSFWTN
TYPEVKKEMKGRYPKHPWPDDPWTATATHRTKSPGK
>PD2074 hsdR, type I restriction-modification system endonuclease
MSEPIPPFRYAPIVCSEQSTIVAEFVPEASGVREAGYQSEAELEAAFIKQ
LQGQAYEYLPITSEAALLANLRRQLEKLNKVTLSDAEWEGFFSTCIAGAH
DGIVEKTARIQENHVQVLKRDDGTIKNMCLLDKVNIHNNTLQVMNQYAVE
GARANRYDVTVLVNGLPMVHVELKRRGVDIREAFNQINRYQRDSFWAGSG
LLDYVQLFVISNGTLTKYYSNTVRAGHVEEQSNKRSKSKTSNSFSFAIWW
ADAKNQPITELTSFTKTFFAKHSLLNVLTKYCVFNAKRKLLVMRPYQIVA
AERILQRIVIATHQQQLGTVAAGGYIWHTTGSGKTLTSFKVAQLACGLGV
IDKVLFVVDRKDLDYQTMREYESFQKGAANSNTSTAVLQRQLEDSDVHII
ITTIQKLSRFVAKHKQHPVYGAHVVVIFDECHRSQFGDMHTKITRAFQRY
HLFGFTGTPIFAENAGSTQNPMRRTTQQTFGDTLHTYTIVDAINDKTVLP
FRIDYINTIKSQPNIKDKKVAAIDTERALLAPERIRQIVSYIREHFDQKT
KRASIYRHEGQRLAGFNSLLATASIDAAKRYYAELMAQQKELPEARRLKV
GLIYSVAANEGGGDGGLGEEEFETEGLDQESRNFLEAAIQDYNALFGTSF
DTSADKFQNYYKDVSERLKKRKLDILIVVNMFLTGFDATTLNTLWVDKPL
KAHGLIQAYSRTNRILNSVKSYGNIVSFRNLEQETNEALALFGNKDAKGI
VLLRPYAEYYKQYEERVGELMAAFPLGKAIVGEAAQKAFITLFGSILRLK
NILTAFDDFGGQEILTEREFQDYQSLYLNLYAEFRSASAAEKESINDDVV
FEIELIKQVEINVDFILLLVEQYVKKKGTGEDKDIRATIERAIHSSPSLR
NKKELIEQFVDAVSMKAKVDAQWQAFVAVKQSQELEGIIAEENLNAEAAR
EFIGNAFRDGGIPAMGTAITKVLPPVSRFSKNNGHAAKKQAVLDKFATFF
ERYFGLV
>PD0475 hupB, histone-like protein
MNKTELIDGVAAAANLSKVEAGRAIDAVVNEITEALKEGDSVTLVGFGTF
QVRQRAERPGRNPKTGEPIMIAASNNPSFKPGKALKDAVKSSAG
>PD1196 int, phage-related integrase
MGRKPIKAGAIPRFRVRPQKSGVVYYYYDHGGKPRKETPLGRDYGLAIKR
WAELEHAQITPAIAVTFRHVAERYRAEVIPTKAYNTQRMHHVYLNYLLQF
FDDPPAPFESIKPVNIRQYLDWRPFKVSANREVALFSHLWNWARSKGITD
LPNPCGGIRRNKERGRDVYIDDTTYRAVYQAADQTLRDAMDLAYLTGQRV
SDVVSMDERHIVNGALEICQAKTGVKLAIAITGELSVLIKRIFDRKRGMK
LRSTRLIVDAKGLELSRIGLRYRFDKARAAAGVAKEVFQFRDLRAKAATD
KADLAGDMRQAQAQLGHASVTMTEHYVRKRKGAKVTPTR
>PD1139 int, phage-related integrase
MGRKPIKAGAIPRFRVRPQKSGVVYYYYDHGGKPRKETPLGRDYGLAIKR
WAELEHAQITPAIAVTFRHVAERYRAEVIPTKAYNTQRMHHVYLNYLLQF
FDDPPAPFESIKPVNIRQYLDWRPFKVSANREVALFSHLWNWARSKGITD
LPNPCGGIRRNKERGRDVYIDDTTYRAVYQAADQTLRDAMDLAYLTGQRV
SDVVSMDERHIVNGALEICQAKTGVKLAIAITGELAVLIKRIFDRKRGMK
LRSTRLIVDEKGLGLNWKKLAYRFRKVRAAAGIAKEVFQFRDLRAKAATD
KADLAGDIRQAQAQLGHTSVVMTEHYVRKRKGAKVTPTR
>PD0384 int, phage-related integrase
MGRKPIKAGAIPRFRVRPQKSGVVYYYYDHGGKPRKETPLGRDYGLAIKR
WAELEHAQITPAIAVTFRHVAERYRAEVIPTKAYNTQRMHHVYLNYLLQF
FDDPPAPFESIKPVNIRQYLDWRPFKVSANREVALFSHLWNWARSKGITD
LPNPCGGIRRNKERGRDVYIDDTTYRAVYQAADQTLRDAMDLAYLTGQRV
SDVVSMDERHIVNGALEICQAKTGVKLAIAITGELAVLIKRIFDRKRGMK
LRSTRLIVDEKGLGLNWKKLAYRFRKVRAAAGIAKEVFQFRDLRAKAATD
KADLAGDMRQAQAQLGHASVTMTEHYVRKRKGAKVTPTR
>PD1075 int, phage-related integrase
MPRPRKYHPSIPPHIDQSKIPKGIYWGDGRWYTLIPHPEGGRHQKRTIAG
RAARLSDLHAIIEQQHTGNVKGTVGDVFNQFHHSSEFAGLAKATQKDYQW
CAQAIQSFLLKDNTTLGSKAVNRLNVPTWQRLVEVIAQGRPAQGDSEAIQ
PAPSKANHMLRYARRAFAWGIRHGHCTTNPAHGVKQAKERARYRMPDLKT
FAAIHAFAAERGQRQAHSIGSVAPYLAAAMTFAYGLRLRGIEVCTLTDAH
HKPEGILSNRRKGSRDNITRWNDELRSAWDWLVQYRAARWASHKRATPLR
PENRFLFVNQSGARLSKSSLDTAWQRMIVMAIMEGVITEEERFSLHGLKH
RGITDSEDKRSGGHRTEVMRERYDHEIPIVEPPKKPGFSRSLHRRYK
>PD1019 int, phage-related integrase
MGRKPIKAGAIPRFRVRPQKSGVVYYYYDHGGKPRKETPLGRDYGLAIKR
WAELEHAQITPAIAVTFRHVAERYRAEVTPTKAYNTQRVEHRCLAPLLKF
FDDPPAPFEAIKPVNIRQYLDWRTSKVIANREVSVFSHLWNWARSKGITD
LPNPCGGIRRNKATGRDVYVDDTTYRSVYQAADQTLRDAMDLAYLTGQRV
SDVVSMDERHIVNGALEICQAKTGAKLAITVTGELAVLIKRIFDRKRGMK
LRSTRLIVDAEGLELSRIGLRYRFDKARAAAGVAKEVFQFRDLRAKAATD
KADLAGDIRQAQAQLGHASVTMTEHYVRKRRGAKVTPTR
>PD1495 int, phage-related integrase
MNHWHAVMLKQCCGLNPNRDHVAIRKILMPTQLKETVPKVIRHTMATELR
SAGVAAQDIQGMLGHRAYGGTTDVYAKYRPDYMADAVRAIDAYMRRLRVS
CVSVNKPQIAQPIDSIGGRCRVRTCDPCRVKAMLYR
>PD0990 int, phage-related integrase
MPLTDTALKALKPRDRIYSVADERGLSVEVYPTGGIVWRFRYRLAGRYEK
LTLGKYPALSLRNARLKRDEAASLVAMGTSPARQKQLAKVTAADAMTVRD
FAERFFREIQSRDRKDSTMPRRYLDKDILPFVGDKPMREVTAEEIRSLIW
RKKEQGFDATAGQIRGVLKRLCDYAVTCGLMPTNPVLALPMRHVYKAVSR
DRALSPDEIRLFLRAVWASRIRRQFKLALHLILLTMVRKSELLLARWDHV
HLDQAQWHIPAEHSKTGKPHIVYLSRQAVVLFEALRVLAGGSALVMPGSG
TLTRPFAHNALNHALGKAMQWQGIHAFTIHDLRRTASTWLHEHGWASDVV
EKALNHSIGGVRGVYNRAEYADQRRQMLQCWADFIEKQLKTDHLLMVCHT
ELDGAKPGTP
>PD0764 int, phage-related integrase
MGRKPIKAGAIPRFRVRPQKSGVVYYYYDHGGKPRKETPLGRDYGLAIKR
WAELEHAQITPAIAVTFRHVAERYRAEVTPTKAYNTQRVEHRCLAPLLKF
FDDPPAPFEAIKPVNIRQYLDWRTSKVIANREVSVFSHLWNWARSKGITD
LPNPCGGIRRNKATGRDVYVDDTTYRAVYQAADQTLRDAMDLAYLTGQRV
SDVVSMDERHIVNGALEICQAKTGVKLAIAITGELAVLIKRIFDRKRGMK
LRSTRLIVDEKGLGLNWKKLAYRFRKVRAAAGIAKEVFQFRDLRAKAATD
KADLAGDIRQAQAQLGHASVTMTEHYVRKRRGAKVTPTR
>PD1940 ligA, DNA ligase
MIPLDPAQRAAELRRRLQEANYHYHVLDQPRIPDADYDRMLRELDALEAT
YPDLATPDSPTQRVGHTIATAFSEVRHTVPMLSLNNAFSDPEVLEFVRRI
TARLGETAPGFSAEPKLDGLAISLRYQNGIFIQGATRGDGVTGEDVTANL
RTLPTIPQRLQSDTWPTVLEVRGEVYMPRPDFEAYNTQARLRGWKVLANP
RNGAAGSLRQLDPHITAQRPLSFYAYGIGEVTDDVAFHRHSEILASLRAW
GFPVSPLVELVYGSEGLLNYYRRMETIRDTLPFDIDGIVYKLDDLSGQHE
MGFVARAPRWAIAHKFPAQEQTTTVEAIEIQIGRTGAATPVARLTPVQVA
GVTVTSVTLHNADQIARLDVRIGDTVIVRRAGDVIPEVVAVITDSRPPGA
TAWSMPMACPVCGSEIVRETGAAVWRCSGELACPAQRKEAIRHFVSRRAM
DVEGLGVKCIELLVDAAVVHGVADLYHLSLDQLLRLRLVTNAQTPTMLLR
EARDHVTGMRYQQLEEILRTVGVDLSGEGDVPKHWQIDVLRAQWPDFDWN
HKKIATKWAQNLIAAIDRSRQTTLERFLFALGMTHVGETTAKALAHSFGD
LAIIRQLPWPLFKCVPDIGGEVARAIGHFMDQPANQQAIDDLVERGVRIT
DAHPPTSTLRDQLTLASLLEHLEIPKITPLRAVQLATLAPTLPLLAEADL
DALLQAGVPQPAAQSLTEWFQSPDNISLARRLQHCCDVLLAQLLSPDRAH
TAPLNGQSVVLTGKLASLTREAAATRLESLGAKIVGSVSKKTSFLVAGED
PGSKLDKAHALHVDIWDEARLLAFLEQYSAQ
>PD0033 mfd, transcription-repair coupling factor
MSPSSFPSPLLPRAGQLRAFWRAPVSPTALAWHIACAAQAHRGPLLLVTH
DNHSAHQIEVDLQTLLAHCSGLPVIGFPDWETLPYDQFSPDPNIVSQRLA
TLHRLPSLARGIVVVPVQTLMQQLAPLSYIVGGSFDFKVGQRLILDAEKQ
RLERAGYRNVPQVMDPGDFTVRGGLLDVYPMGTDVPLRIELLDEEIDSIR
TFDPESQRSLNQVDVIHMLPGREVPLDPAVLERVLVRLRERFDLDTRRSA
LYQDLKAGLAPSGIEYYLPLFFESGRGGKHATATLFDYLSADLLVLTAPG
VSNAADAFWGQTMQRYEQRRHDIERPLLPPQELYQSPDALRERLNRLPRI
EVWSAEHAHIDKAEVLDEQPLPVATKDVSVGQALRTFLADYAGRVLIAAT
SPGRREVLLELLATADLQPEVLPDFRSFFLSAAEVSDLGEANRDSGNGVS
GSNDADAAAFHVIASQGGSLPTFAITVAPLEDGFSLSVPPIAVLTERQLF
PERVNPVRRSRRVGREPEAIIRDLGELSEGAPIVHEDHGVGRYRKLITMN
VSGMPGEFVEIEYAKGDRLYVPVAQLHLISRYSGASPETAPLHSLGGEQW
SKAKRKAAEKVRDVAAELLEIQARRQARAGLALRIDRTMYEPFAAGFPFE
ETPDQLAAIETTLRDLQSSQPMDRVVCGDVGFGKTEVAVRAAFAAASAGK
QVAVLVPTTLLAEQHYRNFRDRFADYPIRVEVLSRFKSTKEIKAELQKVS
EGTMDVIVGTHRLLQPDVKFKDLGLVIVDEEQRFGVRQKEALKSLRANVH
LLTLTATPIPRTLNMAMAGLRDLSIIATPPLNRLAVQTFITPWDNALLHE
AFQRELARGGQLYFLHNDVESIGRMQRDLAQLVPEARIGIAHGQMPEREL
ERVMLDFQKQHFNVLLSTTIIESGIDIPNANTIIINRADRFGLAQLHQLR
GRVGRSHHRAYAYLVVPDRRSMTADAEKRLEAIASMDELGAGFTLATHDL
EIRGAGELLGEDQSGQMAEVGFSLYTELLERAVRSIKQGKLPDLDAGQEE
RGAEVDLHIPTLIPEDYLPDVHTRLTLYKRISTARDSNALRELNVEMIDR
FGVLPETAKHLFAIAELKLQATALGISKLELGENGGRIIFGAKPIIDPMA
VIQLVQKQSKLYSMEGPSKLKLKLPLPEPADRFNAARGLLAALTP
>PD0833 mod, methyltransferase, type III restriction-modification system
MPSQYDHLDRDALIRLLQRRDAERQLGLVWERDEIEADAAVNDDYVALSL
DTSLSHGAAPWPNLIIEGDNFDALRALRMTHRGAIRCIYIDPPYNTGNRD
FVYNDCFIDKTHRYRHSLWLEFIYRRLQLAKELLADDGVIFVSIDDNELF
RLGMLMDRVFGHDHFIANVIWQKIFSPKNTAQHFSDDHEYILVFARNRTL
WRSNPLPRSETQDKAYKNPDNDPRGPWTSGDLSARNFYSLGTYPITCPSN
RVISGPPPGMYWRISKEKFAELDADNRIWWGKDGNNTPRLKRFLNEVKQG
IVPQTLWTYSNVGHTQDAKKQLLDVLQFESSSDVFSTPKPVQLMERILRI
ASNPGDTVLDFFAGSGTFGQAVAKLNAEDGGHRKFILISNTEATQAQPDK
NLCRDVCAERLRRVLGGYTNTKGQAVPGLGGGFAYLRARRIPRHRLTMKL
DHAEVWHALQLLHGKPLTPWPACGFTVDGESGDVLAYLADFRVSSITRLD
AWLAGATAGAMLYSWAPERLTERIGGLSCLPIPQYLRARFGR
>PD0878 mttC, type V secretory pathway protein
MQLIDIGANLTHESFDYDRDAVLQRAYEAGVVQMVVTGSNRTHSSLALLL
AQRHPGLLYATAGVHPHCAAEYTDECDAELRMLHTHKEVVAVGECGLDYF
RDFCPYRTQQHAFERQLQLASENGKPLFLHQREAHNDFMAIMRGFEGRLG
PVVVHCFTGTHEELFDYLDHDWYIGITGWLCDERRGMHLRELVRHIPEKR
LMIETDAPYLLPRTLRPLPKDRRNEPAFLPHIVTELARNRGEDVVTCAAR
STVAAREFFSLPEAGSGS
>PD1897 mutL, DNA mismatch repair protein MutL
MLMPIRQLPEILINQIAAGEVVERPASVVKELVENAIDAGATRVDIELEA
AGVRLIRIRDNGHGMAAQELPLAVLRHATSKIASLDDLEAVATLGFRGEA
LPSIASVSRFTLMSRRATDEHGAVLQIEGGTLGEVIPHAHAPGTTVEVRE
LFYNVPARRKFLRAERTELGHIEEWARSLALAHPDLELRLSHNGKLSRRY
KPGDWYSDVRLIEILGEDFAHQALRVDHSGAGLRLHGCIVQPHYSRLNAD
QQYLYVNGRPVRDRSVAHAVKQAYSDVLYQGRHPAYVLFLELDPARVDVN
VHPAKHEVRFRDARLIHDFVYRTVQGTLAQTRAGTPPLAVGVGDVEGEGA
RPPGRHAVSFSGRRGGASHVLGSYSASTAPLMQGVPSVSVADAPAAYAAL
YAAPPTQVMDAVPQMQTGLPLAAGAGDVPLLGYAIAQLHGIYILAECADG
LIVVDMHAAHERIGYERLKRAHDGIGLRTQPLLVPMTLMVAEREADVAEC
EAETLANLGFEVTRSGPGSLQVRSIPALLSQAEPEMLLRDVLSDLSEHGH
TRRVAEARDTLLATMACHGAVRAHRRLSISEMNALLRDMEATERSGQCNH
GRPTWARFSLAEIDRWFLRGR
>PD0053 mutM, formamidopyrimidine DNA glycosylase
MPELPEVETTLRGLLPYLTNQLIYSLTLRRRTLRWDIPSHIESRLPGHRI
TTVCRRAKYLLIDTNAGGSLIIHLGMSGTLRLLAPETPLRPHDHVDIMLN
NRRVLRFNDPRRFGCLLWQEDGQIHPLLQRLGCEPLSDSFNGDYLYQCSR
ARNVSVKTFLMDQRIVVGVGNIYAAESLFRAGISPLCEADKISLQRYRRL
AEVVKDILLYAINRGGTTLRDFLSPDGRPGYFKQELFVYGRQQQPCKQCG
SLLRQTTIRQRTTVWCGHCQG
>PD0138 mutM, formamidopyrimidine DNA glycosylase
MPELPEVETTLRGLLPYLTNQLIYSLTLRRRTLRWDIPSHIESRLPGHRI
TTVCRRAKYLLIDTNAGGSLIIHLGMSGTLRLLAPETPLRPHDHVDIMLN
NRRVLRFNDPRRFGCLLWQEDGQIHPLLQRLGCEPLSDSFNGDYLYQCSR
ARNVSVKTFLMDQRIVVGVGNIYAAESLFRAGISPLCEADKISLQRYRRL
AEVVKDILLYAINRGGTTLRDFLSPDGRPGYFKQELFVYGRQQQPCKQCG
SLLRQTTIRQRTTVWCGHCQG
>PD1081 mutS, DNA mismatch repair protein
MREKPEGGKGMAEHTPLMKQYFAAKAEYPDLLLFFRMGDFYELFHQDARK
AARLLDITLTQRGSSGGTPIPMAGVPVHAYEGYLARLIALGESVAICEQI
GDPGLAKGLVERKVVRIVTPGTITEEALLEERRDTLLMALSRTKNCYGLA
WADLAGGRFLVNEVDSEEALEAELARLEPAELLLPDEDAWPEYLQQRNGV
RRRPPWLFDADSGRRKLLAFFKLHDLSGFGIENNPQATAAAGALLGYIEE
TQKQRLPHLTSITMETVGEAITMNAATRRHLELDTRVDGESRHTLLGVLD
STVTPMGGRLLRRWLHRPLRLREVVRQRHAAVGSMIDSDLDNKLRETFRR
LGDMERILTRVALRSARPRDISTLRDSLSLLPRLRELLNASDSPRLRVLY
AELGEHDSTASLLVKAVAEQPPLKLTDGGVIAPEYDVELDELRKLSNNAD
QFLIDLETRERESSGISTLKVGYNRVHGYYIEISKGQADKAPVHYTRRQT
LTNAERYITEELKAFEDKVLSARDRALAREKLLYEQLLDTVGAQLEPLKR
CAAALSELDVLVCFAERAQTLDWVRPELEHTSCLHIEGGRHPVVEAVREQ
RFEPNDLYLHPERRMLVITGPNMGGKSTYMRQNALIVLLAYIGSYVPASR
ALIGPIDRIMTRIGAGDDLARGQSTFMLEMTETSYILHHATAQSLVLMDE
IGRGTSTYDGLALADAVARHLAHINRCYTLFATHYFELTALAEETYEGGL
SGIANVHFDAVEHSERLVFMHTVKDGPANRSFGLQVAALAGLPAATVAQA
RRRLAELEQRGRESHVSEITQLELDAPQQCNLFASAPSAAQEALVALHPD
ELTPKQALEALYRLKALL
>PD0527 mutT, mutator MutT protein
MAYTPIIATLGYVLSPDQCRVLMIHRNARSGDAHLGKYNGLGGKVEPGED
VLAGMRRELYEEAGIDCLSIRLRGTISWPGFGKQGDDWFGFVFVIDAFQG
EPKTHNAEGVLEWVERQRLFELPMWEGDAKFLPLVFDDDPRPFHGVMPYC
EGRMQSWSFSRL
>PD0663 mutT, dNTP pyrophosphohydrolase
MPLTQEHWQPNVTVATVVAHNQHLLLVEETINGILMLNQPAGHLEPGESL
LQAALRETLEETGWKVRLTSLIGSYLWTSATGYTYLRFAFSAEPLTYYPQ
HPLDVGIVRALWLTPSELQAATAPLRSPLVWQVIADYLSGQQAPLDLVRY
VP
>PD0882 mutY, A/G-specific adenine glycosylase
MIALYAQRLLTWFDQYGRHHLPWQHPRTPYRVWISEIMLQQTQVSVVIPY
FLRFLERFPTLPELAAADTDAVMAHWAGLGYYARARHLHVAAKRCVELHG
GDLPHDQNALQALPGIGRSTAAAILSQAWNDRAPILDGNIKRVLSRLHGI
VGWSGQSMIEKELWELAGAYVLQAPTGRLADYTQAQMDFGATVCTRLRPA
CLICPLQDGCVAWREGLTETLPTPKPSKVLPEREAVVLLLQNDDDAILLQ
RRPLNGIWAALWTLPQADTEAELRIWCAQHTNADYDLAKVLDPIVHTFSH
YRVYLKPRYMRKVALHRGLENTDGLRWVTRTSLPMFGLPAPIRKLLNEL
>PD0899 nfi, endonuclease V
MKISSIDSIFAAWDGSITEARRLQSDMAERIVLKDEPNLLSEPTLLAGFD
VGFEDEGRTTRAAAVLMNAGDLRLLETHVVRVPTSMPYVPGLLSFRELPA
LLQALTQLSRIPALVFVDGHGIAHPRRLGIAAHFGLVTNLPCIGVAKKRL
VGDFVEPGTAFGEHTPILLHGTQVGWALRSKMHCKPLIISPGHKVSLHSA
LTWTQRCLTGYRLPEPTRQADRLASRRGQKIVSDLPSLL
>PD1110 nohA, phage-related packaging protein
MRGVLILTCCLYRPMVLQKQQGKQVNRAGLSEIFGVALPTVDQWARNGCP
VVKRGGRGREWTFDTAVVARWLRDKAAEEAAGGAVADIEEWKRRKIAAEA
QREELHLADAKKQVAPLEQVEKTLARVFAEVRANLRTIPGRTVALLLGET
DERRYKRVLLQEIDQTLENLASLDLTQEDTDSDEDEETDDV
>PD1523 nth, endonuclease III
MTRAEIREAFVRLQEINPHPTTELKYTTAFELLIAVILSAQATDIGVNKA
TRRLYSLANTPQAILDLGEDALKRHISTIGLFNAKAKNVIATCRILVEQY
GGAVPRDRALLEALPGVGRKTANVVLNTAFGEPTIAVDTHIFRVANRTGL
AIGSNVRAVEDALLKRIPQEFLKDAHHWLILHGRYVCKARKPNCSQCVIA
DLCRYKDKTPAA
>PD1674 nudh, (di)nucleoside polyphosphate hydrolase
MIDPDGYRPNVGIVLIRRDGQVFWGRRVRRDGWQFPQGGMHSDETPVEAM
YRELNEETGLLPEHVQLVGATPGWLRYRLPSQAVRCNRSQMCIGQKQVWF
LLQLIGDESHVQLDQSENPEFDHWRWVSFWYPIEHVVMFKRSVYARALCQ
LASLAQQVVGLEVGTMPQYVQDICLLNVGYKHLPNWVSRY
>PD1975 ogt, 6-O-methylguanine-DNA methyltransferase
MSQLCYDIFDSPIGILTIVADTDALCRVMLPSNDHTTKEHECWHYAPSTT
LLKQARTQLLDYLHGELHTFSLPLRPQGTPFQCAVWKALAHISFGQTWSY
AKLAAHIGRPSASRAVGAANARNPLPIVLPCHRVIGSNGALTGFNGGLHI
KRSLLYLEGTKPTHTCKTIMTS
>PD0594 parC, topoisomerase IV subunit A
MTDLTRPFFHGFEQMPLREYAERAYLDYSMYVVLDRALPFIGDGLKPVQR
RIIYAMHELRLNPKAKPKKSVRAVGDVIGKYHPHGDLACYEALVLMAQPF
SYRYPLIEGQGNFGSSDDPKSFAAMRYTESKLTPISEILLSELSEGTVNW
ITNFDGTLEEPAWLPSRLPHLLLNGTTGIAVGMATDVPPHNLNEIASALI
HLLDNPNATIAALCQYIRGPDYPTAAEIITPPNDLQNLYETGNGSVRTRA
TYHKEDGNVVITSLPYQVSPSKVIEQIAQQIRSKKLPWLDGEGVRDESDH
KNPVRIVLFPRSQRIDVEQLMGHLFATTDLEKSHRVNLNVIGLDGRPQVK
PLKQLLSEWLSFRSDTVTRRLKYRLQKVESRLHLLEGLLIAFLNLDKVIH
IIRNEDEPKPVLIARFGLSDAQTEYILDTKLRQLARLEEMAIRSEQDALT
KERDEINVILDSDVQLKKLIKDELLADAKTFGDARRAPLVARQAAQAIDE
SELVASEPMTVVLSEKGWIRAAKGHDVDPSGMFYREGDRLLAAVRTRSTH
QVSFLDSEGRAYSTLVHTLPSARGNGEPLTGRFSPAPGASFQAMASADND
KLFVLASSHGYGFITRFENLTGRNKAGKAMIHLTPGAQVMGLAPLTNVQH
DRIVAVTSAGNLLAIAASELPELDKGKGNKLIDIPKTKLATERLVAVIAV
ASSHTLLLYSGERTMRLSFKDLEAYLDTRGSRGQLLPRGWHKIDTLDIQ
>PD0539 parE, topoisomerase IV subunit B
MNSRYNAADIEVLTGLDPVKRRPGMYTDTTRPNHLAQEVIDNSVDEALAG
YANRIEVTLYKDGSCEVADNGRGMPVDIHPEEKIPGVELILTRLHAGGKF
SNRNYTFSGGLHGVGVSVVNALSSKVDLFIKREGSEHHMEFREGFAVSKL
KVLGTVSKKNTGTRLRFWPDSKYFDTPKFNVRVLRHLLRAKAVLCPGLTV
ELLEEATGEINTWHFKDGLRDYLKGEMTESELLPAELFIGCLKKDTEVVD
WAVAWVPEGELTQESYVNLIPTPQHGTHVNGLRSGLTDALREFCDFRNLL
PRGIKLAPEDVWDRVTFVLSLKMSDPQFSGQTKERLSSRQAAGFIESTVH
DAFSLWLNQNVDIGEHIAQIAIERASARLKTEKQVTRKKITHGPALPGKL
ADCISLDLSRTELFLVEGDSAGGSAKQARDKDFQAILPLRGKILNTWEVA
SGSVLASDEVHNLAIAIGCDPGKDNLSGLRYGKIVILADADSDGLHIATL
LTALFLKHFPGLVAAGHVFVAMPPLFRVDVGKQVFYALDDEEKTILLEKI
QREKIKGQISVTRFKGLGEMNPQQLRESTIHPDTRRLVQLTMDDNTQTCS
LMDMLLAKKRASDRKQWLETKGNLASLDI
>PD0396 polA, DNA polymerase I
MSKLVLIDGSSYLYRAFHALPPLSNAAGEPTGALFGVVNMLRTTLKERPD
YAAFVIDAPGKTFRDALDSEYKMHRPPMPDDLRMQVEPMRGIVHALGIDI
LCIDGVEADDVIGTLALAAVADGIAVTISTGDKDFAQLVRPGVELVNTMT
GSRMDSAMAVINKFGVAPDQIIDFLALMGDSVDNVPGVDKCGPKTAAKWL
AEYGSLDAVIANADKIKGKIGDNLRVVLPRLLLNRALITIKTDVVLEKRP
QDLALRERDTEALRDFYQRYGFTQALKELDGGSVAVTVAEQEPGRGRNAG
FHVAPDASVAMEINPALSASGEYETIFTIEQLQDWIVRLRVAGQFALDTE
TDSLDPMQAVLIGLSFASEVGCAAYLPFGHDYPGAPVQLDRGQALALLQP
LLEDAAVRKVGQHGKYDMHVLRRYGIVLAGYADDTLLESFVLTSGHARHD
MDTLARRHLGYETMKYVDLVGKGAKQIPFSHVGVQEATQYAAEDADITLR
LHCVLAPKLLAEPRLERVYREIEMPLVAVLERIEANGVQIDAEELYKQSA
DLSRRMVIAQQKAMDLAGRHFNLDSPKQLQVLLFDELKLPVVVKTPKGQP
STNEEALEAIVDQHALPRVILEYRSLAKLRNTYTEKLPEMIHPHTGRVHT
NYHQAGAATGRLSSSDPNLQNIPIRTDDGRRIRRAFVAPSGRKLIACDYS
QIELRIMAHLSGDAGLVDAFESGVDVHCAIAAEVFGRGIDEVTPNERRAA
KAINFGLIYGMSAFGLARQLGISRGEAQDYIALYFDRFAGVRDFMENTRQ
QARDRGYVETVFGRRLYLNSIASGNQTQRAGAERAAINAPMQGTAADIIK
RAMVAVDGWLGVGGHRERALMILQVHDELVFEADEGFVPTLVHEVSARMA
AAAQLRVPLVVDVGVGHHWDEAH
>PD2047 priA, primosomal protein N'
MPPTILRVALPIPLPQCFDYLPPSGIPLPDSTLGCRVRVPFGKRELIGVV
VELPSAEMSVPLREAFAWIDRIPILDGELAQSLQWLSHYTHTPLGEILAT
ALPGLLRHGKPLPETWTCWAWRLTETGRTAAPKLRRNSRSAQMAELLTAS
DQTEDALNTRMNRWRAVAHNLTKRGYVERIKKPTTVPVIIQTTSNTVPVL
NTEQQKAVETLNANVGFKTYLLDGVTGSGKTEVYLQAIATCLAASKQALV
LVPEIGLTPQLLTNFHARLGIPVHALHSKLADSERARVWATARCGEARLV
LGTRSAVFTPLPNAGLIIVDEEHDTSYKQQDGIRYNARDFALVRGKALNV
PVILGSATPSLESLYNAHNGRYKHLRLSYRAGQAYAPQVRVLDVRKRPLK
DGLSPEVLTGINATLARDEQVLVFKNRCGYSPVLLCHDCGWTATCHQCST
SVHHTPMTVYSGGTYLQCHHCGARQPMPLSCPDCGSTALQPQGIGTERLE
ARLIEAFPKHPVVRIDRNTTKHRDGLKTQFTKLGNAAGILVGTQILAKGH
HLPRLTMVVVVGIDEGLFSADFRATEKLSQQLIQVAGRAGRAKHAGEVWL
QTHHPDHPLLQTLINGGYHTFANTELQQRQAAWLPPFAHLALLRAEAKDT
TSTQQFLTTIRKHMPTNNAVECYGPMSAPMPRRAGYERYQLLLSSSQRNA
LHRTLNVLIPAIHALPEARRVRWSLDVDPVDLY
>PD0117 radC, DNA repair protein
MHINNWPTHERPREKLLAHGAATLSDAELLAIFLGSGLRGHDAVQTARNL
LHTHGPLRELLDRPPGDLMRLPGLGLARACKLTAALELSTRHLAAALQRG
ASIHDPISAGRYFAQRLRANPNEVFAVLFLDNRHRAISFEELFHGTINGA
EVHPREVVRRALTLNAAAVIVGHNHPSGNREPSPADQMITQRLKNALDLI
DVRLVDHFVIGDGAPVSFAEHGWL
>PD1574 rdgC, recombination associated protein
MFFRNLTLFRFPTSLDFSQIDSILPNARLRPVGPLEMTSRGFISPFGREE
QEVLNQRQGDFLWLTVGSEDKILPASVVNDLLTRKCSEIEEKKGHPPGGR
ERKRIKDDLIHELLPRAFVKNSRIDAMLDLRYGYVAVDTASRKAAETVIS
EIRDLLGSFPALPLNAEISIRSMLTSWIAGEPLPEHLNLGDECEMKDATE
GGAIIKCQHQALRCEEIDKHLEVGKQVSKLALILDDHVSFVLGDDLVIRK
LKFLDGMLDQLEHSDTDGIRAELDARFALMSAEIRRLFLLLEVPLKLSKA
NN
>PD0093 recA, recombination protein RecA
MDENKKRALSVALSQIEKQFGKGSVMRMGDRVIEAVEAIPTGSLMLDLAL
GIGGLPKGRVVEIYGPESSGKTTLTLQAIAQCQKRGGTAAFIDAEHALDP
IYAGKLGVNVDDLLLSQPDTGEQALEIADMLVRSGSIDIMVIDSVAALTP
RAEIEGEMGDQLPGLQARLMSQALRKLTGNIKRSNTLVIFINQLRMKIGI
MMPGQSPETTTGGNALKFYASVRLDIRRIGAIKKGDEIIGNQTKIKVVKN
KLAPPFKQVVTEILYGEGISREGELIEMGVEAKLVEKAGAWYSYGGERIG
QGKDNARGYLRENPHFAAKLEADLREKFEPTELSREEGDEDTLEDAM
>PD1652 recB, exodeoxyribonuclease V beta chain
MNTPHDPYLTLPLHGVRLIEASAGTGKTFTMATLVTRLVVERGWRIGHIL
AVTFTEAATQELRTRIRERLILAARLVPQAAELPVPLPSAQPQMSHPTPH
PQDAPRITPGVTNSASPEPPDVVLTLQILRTHLAATDETPHALHSRLQQA
ADEIDLAAIFTIHGFCTRVLREHALHTGQSFIPPTLLASDRDLLHELAAD
IWRQEIADPEAIQDLIHLWPAGAPMLAQDLTDLLYQPHLSPAPSLAAPVV
LPDAALAVAETTLRHLWQTEGAALRSALHTALEEGVLNKKSYKADALNDL
WDWMERWSLAPNAYPEPHPKLQTLTVAALQAGTNKQGAGRSPNSPVSEAV
QHYLDALTSIETARAQHRLRRLHRLRAAARLRLTALKRQRRVQTYDDLIQ
RVAQALDGPHRLALVRSLRQQYRMALVDEFQDTDVAQWRIFHHVFGDTEH
AHTADLTPALFLIGDPKQAIYGFRGGDVHTYLAAAARAERAPPLERNFRS
RPLLLRAIEALYTQAGDAAFLTPGIAFHPVQPGTHCRDTDLSNAGVPAPA
LQVWQAPPPLDSTAKGKPKPWNADAARALCTDACVHAIHQWLADAQTGRA
LLDGRPVGAGDIAVLVRSHREATLMQQALARAGIPAVAAGKRSLLTTDEA
NEALALLLALLHSADEGRLRTALSTVLVGLTAETIATFDHDSVASRHWQR
QALHWRERLHSGGPLGLLTDLCALHAARLLSLFDGERRLSNYLQLGELLQ
QVHLRALGLHGLVDWLARRIAEAKNDDETQLLRLESDARRVQIVTLHKSK
GLEYPLVFLPYVAIGRSHAGPGRYCVVHDAQQGRCLHWCLDKQAPEWQRA
ETAWKQEQRAEEARLLYVGLTRAKHALWIATGTFYQTERTALWPLLGDPQ
AVPAQPGIVFDTAVPPAILPRLTPEQPHSVPPARTAQRGALLSDWWVYSF
TQLAHAKAEPAPDGGRRIAEPLTGGQDEPAWPQDAIQQPLPGSEVPADPR
FTGIRFGVALHEVFERTDFLAWSTWRANVPVPATERGVLLQALRGSGYVA
EDVEAGIALLTPLVGHTLTSVLPEGVRLCDVPTTERRPEIEFQFVIQATA
VDALLALLHDHGLLQQRQSFGMRRRLEGLMTGMIDLIYRHAGRWYVLDYK
SNRLPDYTPAHLSVAMTDSEYDLQALIYTVALHRWLRFRLRDAYDYARDM
GGIRYLFCRGMDATRPNAAGVYTQSFAPALIEAVDAMFSGVCP
>PD1653 recC, exodeoxyribonuclease V gamma chain
MSQMMVTTDFRLYHSNALDVLAGLLAETLRSPVPGQSLLVPDTILIPQAA
MRRWLQATLATTHGVVANLEFLTPGEFVARALDANLGAVPNALDTAVLHW
RLYAALRDPALLTQPELAELHAYLADGDLFKPWTLAEALSAAFEKYQAWR
CDWLLRWEAGADPDDPQAILWRHSVNGATHRARRIHDYLNRYGSGTAPPP
QGLPARLFIFATLNISPDVLRVLATQAQVGTLHFYLPTPTKEYWGDAQPF
TQRLHQPTDCVTQTGENRLLHTWGAAGRDFMTVLGNYEVVHPSGEITAYD
DPEQRPGTTLDEGGLRDSLLQRLHADLFHNRSAPVPAPLPAPRLEDPSLQ
FHACHTRLRELQVLHDRLRALLEPNSPEGQRFNPPLQPREIAVLAPDIDL
YIPYLEAVFGGHAHSDPLPYTLADASPLIDEPLAEVFLRLLDLPVSRFGL
HEILDLLASLPMATLAGFDTQTLEILRSWLTAAGARWGLDAAHRAEHQAP
ADDAYTWSFALDRLLLGHASGADADIAGVAAWPDLEGSMLTALDTLIRLL
RVLANTRQRLSEALLPTQWRERLLSLLDALLPDIPTVPSGIQRPLERLRR
LIDTFATDATRAGVALPVPAEVVRMHFAALLADTDTRAPLLTGGISIGRM
VPMRLLPFRVICLLGMNDGDFPRRDPAAGLNRLTAELGTAQRRPGDRSRR
DDDCLLLLQLFSAAQDVFYVSYLGVDPHDGSLREPSPLLTELLSTAATYH
ADPSTAAKTLLLRHSLQPFSPTAFGADGDPRRFSYHPLWQAAAASIEGQR
HPLAPWCPRRLPALPDPEPPLPLDSLRRFLSAPAEQFLQQRLGLRLPEPP
QTTDECDPLWLPSHGLERHRLDTLIFASLLHENDDTLYPQLRARALLPSG
PLGQQQLQERIEHLRPYAQAFAHWRGTALPQSQCLEVMIDGIRLHAHIQD
LYPHGIARLRLGPPNGPAVLRHGLDWLLASAAGHPWPLVRFEDAGVAGLG
PHLQPSLPSSQAQTALTLLLRLRTAGLRQPLPFAPYSAWEYYTQRDTPER
ALQTARARWRGNDHQWGESNHAAIQLALRNHDPFATPQTAAHFAQLATLI
FDLLTTGQADPEPLTWLQLHP
>PD1651 recD, exodeoxyribonuclease V alpha chain
MSLLAALNQAGVLRTLDDALARSLCRLDPKTPDKVAAAAALASMAVAHGH
AGVDLAHPGLLAGEMFDWPSAAEWVHLLRASRWVAEPSEGEAPAPTGQPL
VLEQGVLYLRRYREYERRLAIGLRRIAAARLPPAESAAVATVFAALFPQA
RAGQDRQALAAALALQRALLLVTGGPGTGKTTTIARLLLLRVAQARQQGQ
ASLRIALAAPTGRAAERMAESLRAAAGHVSAAGGDAALFAALPSGASTVH
RLLGVIPDTPRFRHCEDNPLPYDVIVVDEASMMDLPLMCKLVDAVADGTQ
LILLGDPDQLPSVEAGDVLAGILAAAGSGEVLDVADAQVLAPLLGAPSAA
VVAECHVVRGGLHGHRVHLQHSHRQGEDLALAPLAEAVRLGDATAVLGML
RRGTLRGVQFHEGVLDPCVGAGQVLLAHWRALAALSDPVQALAAAGRLRL
LTALREGPQGAAGINARIERLLGGGGVDGYFHGRLLLMTETSSRQRLFNG
DIGVCLRDDDGTMWAWFSGAGGEGVRAFAPAALPAHESAFAMTVHKAQGS
EFDTVWLQLPRQESRVLSRELIYTGLTRARHGLHVAGSESVLCAALARQA
VRVSGLAWRLGVTGCNTVPIGAGAGDAEVFGKGGQGVLF
>PD0003 recF, DNA replication and repair RecF protein
MHITQLVLRHFRCFDVVDFFPLPGLNFFIGENGSGKTSLLEAVHLMGYGR
SFRGRVRDGLIRHGSENLEIFVDWQETALINARRRRAGLSHYGQEWIGRL
DGQKIMHLASLCAALAVITFESSSYQLINSNAELRRRFLDWGLFHVEPDF
LDLWRRYTHVLKQRNSLLKQKEELAMLEAWDQKLSEVGEQLTFRRFQYLE
RLKQRVIPLISRITPNLKIHGFNFNHGWRRHELPLIDALFISRERDYQYG
YTSLGPHRSDWTPQFSSIPGVHFLSRGQGKLITLMCLLAQAQDFFDQRGE
WPILALDDLASELDQKHQWRVLEMLAEIPAQVLITGTEIPQGLKPFFSVG
AMFHVEHGAITRMF
>PD1705 recG, ATP-dependent DNA helicase
MPRARSHAIDLNVAGNAPLSVLPRVGPVLAGKCAARGIFTLQDLWLLLPL
RYEDRTRLTPIAELQDGVAVQIEARVEAVERSFRYRPLLRVVLSDDAHHI
LTMRFFHFRAAQIARFTVGTRVRAYGVPKLGQYGWEIVHPSYRILAPGEA
VSLNDCLDPVYPVIDGVGPAIVRQLIREALEHLPTDAALELLPDVWLSDL
GLPTLRTALLIMHRPPLDADIARLMVGTHPAQQRLSLEELLSHQLSLRRQ
RIALQRHSAPALPDGAALVASLLHALPFHLTAAQQRVFAQIAADVAKPVP
MLRLVQGDVGSGKTVVAALAALLAVEQNKQVALAAPTALLAEQHFINLRD
WLEPLGVRVYWLAAKVTGKARLQALNDVASGDAQVVVGTHALMQESVVFH
DLALTIVDEQHRFGVHQRLLLRDKGATDGIVPHQLVMTATPIPRTLAMAA
YADLDVSVIDEMPPGRTPVQTNVLSAERRPELVERIRLACAQGRQVYWVC
TLIDESQTEAEQAPPSSNDIGHRSEVQAAQATYEALSAQLPGVRVGLVHG
RMKAAEKQRTMRAFKCNEIDVLVATTVIEVGVDVPNASLMIIENAERLGL
AQLHQLRGRVGRGSVVSSCVLLYQPPLSMLARQRLQIMRQTNDGFAIAEK
DLELRGPGELLGTRQTGLAAFRVADLARDAHLLPRVYSLANMLLDESPQL
ADQVIARWIGSAVRYASA
>PD0402 recJ, single-stranded DNA exonuclease
MWCAYSAGRLSVPKIIRRLSLPLVVWPDNVPPLLRRVYTARGCADPVTAQ
PCLAQLLSPAMLSNMQAATVLLTEVIKANGRILVVGDFDCDGATACAVAV
RGLRLLGARNVMHAVPNRMVHGYGLSSALVEELAPLQPALLVTVDHGIAC
HAGIAAAKARGWKVLVTDHHLPGETLPAADVIVNPNLPGDLFPSKTLAGV
GVIFYVLLALRARLYPAARAECEGQETRIHSSISQKNRPDLTSLLDLVAV
GTVADLVPLDTNNRALVAAGLRRLRRGQGCLGLRALIEVSGRDESQLTAT
DIGFALSPRLNAAGRLEDMALGIELLLTEDWTRARAIAAMLEEINAARRV
VQQGMSDDAEQAVAQAMAQSGGVLPMAVCLFDPDWHPGVIGLVASKMKDK
MHRPVVALAPAEPGGTVLRGSARSIPGLHIRDVLVALDSGYPGMIQKFGG
HAMAAGLTLDAEVLPVFERVFRAQVEMMVDKNVLQAELYSDGELAADELD
ALHARALRLGGPWGQGFPEPLFDGEFEVLQWRVLKERHLKMEVRYSGRHD
ALNAIYFNGWQGDPPARRLRLAYRLVCDDYRGGDAIQLIVEYAEVIECDV
LGSQAISSGLLDP
>PD1373 recN, recombination protein N
MLRHLTIKDFAVVRNIELEFGPGMTVVSGETGAGKSLIIDALGFLSGLRA
DSSVVRHGAERAELSAEFDITIHHHARVWLRNVELDDGDQCQLRRIIRAD
GGSRAWINARPVTLSQLSDLATHLVEIHGQHEHQTLLSRQSQLVLLDTYA
QNETERDAVQQAATHWQALLDERDALQAQGDMSERINFIEHQLTELQREN
LDPATITALDASHRRQAHTAALIEACKNTTQTLHGDDTTSALHLLHAARH
TLSRVNEHDARLGEVETLLDNAMIQVDEALTLLDRIHNDLNIDPEQLEAI
ELRIGRLHSLARKHRCTPLDLAAQRDRMAAEVESMRNMDIHLQQLDHRIS
NAMTKWRQAAEKLSISRTRAAAALSTTTTNLINELGMGGGQLLIQLQPHE
NNRPHPNGAERTEFLIATNPGQPPRPLRKIASGGELSRVSLAIMVAALGL
DTVPTMVFDEVDTGIGGAIADIVGQKLRALGEQHQVLCVTHLPQVAAKGH
THYRVSKIPIDGITQSAICLLDSQARQEEIARMLGGVHISKEAHAAAGKL
LQELQEM
>PD1292 recO, DNA repair protein RecO
MLIEHEVAFVLHVRPWRETSLLVEVLTQAYGRLGLIARGVQGLKKQTLRA
ALQPLQWIRFSAIQRGELGQLRQAEALDTAPRLKGETMLASFYINELLLR
LVPRHAPVNELYLAYSQTRERLRTNDSLAWSLRLFELDILETLGVGFNLE
CDANGTPLDPAARYVLDPLEGPRLLLSEHNNAERRDTATGHVLLALAHKQ
IPNTNDLAGLRRSMRAVLLHHLGGRGLKSWEMIAAFRHQDTSP
>PD0617 recQ, ATP-dependent DNA helicase
MSTSSATQTVLQRVFGYDTFRGPQQAIIEHVAAGHDALVLMPTGGGKSLC
YQVPALLRKGIGVVISPLIALMQDQVETLRQLGVRAAYLNSTLDATQAQR
IEHALVTADLDLLYITPERLLTAHFLSLLERSQIALFAIDEAHCVSQWGH
DFRPEYRQLTVLHERWPHVPRIALTATADPPTQREIAERLDLSDAHHFIS
SFDRPNIRYTVVQKNNMRRQLQEFLSRHRNTAGIVYAMSRRKTEEIAAYL
CTQGYNALPYHAGLPAETRAKHQRCFLREEGIVMCATIAFGMGINKPDVR
FVAHIDLPKSLEGYYQETGRAGRDGEAAEAWMCYSLGDVVLLKQMIEQSE
ASEARKCVERAKLDHLLGYCESMQCRRQLLLSSFGETYPNPCGNCDNCLT
PATAWDATVLSQKALSCVYRTGQRFGVGHLIDILRGSKSQRILQLGHDQL
STYGIGRDVDERSWRSVFRQLVATHLLEVDNEGYGGLRLTPSSRPVLKGE
RQVMMRRDQFIRERDRTGQRHGLSVLPEDLGLFNALHRLRAQLAKEQNVP
AFVIFHDSTLRHIAEQRPTNINALSKINGIGSNKLTRYGHQLIELVLAQG
>PD1057 recR, recombination protein RecR
MSTHLLEQLIDAFRILPGVGQKTAQRMAYHMLEREREGGQRLADVLSRAI
EKIGHCTECRDFSETKICAICANSSRDRHQLCVVESPPDRLAIEQATGYR
GLYFILQGRLSPLDGIGPHELGLDHLGQRLAAGEVTELIIATNATVEGET
TAHYLALLARQHGIRPSRLAQGLPLGGELEYLDRGTLSHAFGTRTEVV
>PD2041 rep, ATP-dependent DNA helicase/DNA helicase II
MHGLNSPQRAAVLYREGPLLVLAGAGSGKTRVIVEKIAYLITSDCYPAKR
IAAITFTNKSAKEMRERVAKQIKSSRADGLTICTFHALGLKFLQIEHEAV
GLKPGFSVFDADDADAQINDLLHGAKQDVIDDTKRRISRAKNAGLSPEQA
LAAARTTRDMEVATLYARYQARLIAFNAVDFDDLIRLPVQILETSDQVAI
AWRERIGYLLVDECQDTNDAQYRLLKVLASPRGNFTCVGDDDQSIYAWRG
ANAENLMQLERDYPQLKVIKLEQNYRCPNRVLRAANALIAHNPHAHLKTL
WSDQKDGERIRIWECRDSEHEAEKIAAEISYLGDAKQVPWSDFCILFRGN
FQSRPLEKALQLLRIPYHLTGGTAFLERQEVKNLLSWLRLLVNPDDDAAF
LRAVQSPKREVGSTSLAKLAELAATKQMPMSRAAESLGALQQLPARAASG
LNKFTDILRELRQQVSRVSAAELVRRLAEVSGLLTELREQSNDEASYQRR
KRNVEELAEWFEGDPFGASVGDLVSQLALLSRNDKDDGGNQVRMMTLHAS
KGLEFRYVFIAGCEDGVLPHEVSLEEGNVQEERRLLYVGITRAKEQLWMS
YSKCARRFGERVRFKPSRFFDELPAEELQCDGADPAVDAERKQERAKAGL
AAIQALLD
>PD2053 rhlB, ATP-dependent RNA helicase
MSDKPLTNLNFSSFDLHPALLTGLTRAGFTLCTPIQALTLPVALAGRDIA
GQAQTGTGKTLAFLVVVVNRLLSSPGLVNRNPEDPRALILAPTRELAIQI
YNDAVKFGGNLGLRFALIYGGVDYDRQREMLRKGADVVIATPGRLIDYLK
QHEVVSLRVCEICVLDEADRMFDLGFIKDIRFILRRLPERCSRQTLLFSA
TLSHRVLELAYEYMNEPEKLVAETESVTTTRVRQRIYFPAEEEKIPLLLG
LLSRNEGMRTMVFVNTKVFVEGVARALDEAGYRVGVLSGDVPQRKRETLL
NRFQKGQLEILVATDVAARGLHIDGVNYVYNYDLPFDAEDYVHRIGRTAR
LGADGDAISFACERYAMSLPDIEAYIEQKIPVAAVTAELLAPLSRPGRAS
NGNGDTVGDISPHSRDVLVAQEWRRGKPRGSPGERDGRIRVCKGTRSDGG
GGRRRTKFRLETERDSSVDGAVTPVFGVSTGIVSAPGKEVGRNIGLRRRS
RSMDSGESGHVVATADQVAAKSGSQPSLLGRIGRRIRSLLSMF
>PD0157 rhlE, ATP-dependent RNA helicase
MNFETLGLLPSLLRALSEQGYEIPTPIQQQAIPLALAGHDLLAAAQTGTG
KTAAFGLPVLQRLMAASSNVGAGKPRALVLTPTRELATQVHDSLRGYAKY
QRVSSAVIYGGVGMGNQLDVLRRGVDLLIACPGRLIDHIERRSVDLSGVG
ILVLDEADRMLDMGFLPSIKRILGKLPRQNRQTLLFSATFAEPIKQLALE
FMCRPREVMVASHNTVAETITHRVHPVDVSRKRELLLYLLAQDSREQTLV
FVRTKHGSDKLATFLEKYGIKTAAIHGNKTQGQRLRALNSFKAGRVTVLV
ATDIAARGIDIDQLPKVINYDLPMVAEDYVHRIGRTGRNGVQGEAISLVT
QEDAKLLRQIVRLLDRDMDIRDVPDFEPQVPIRWGNSAPGKSKQPAGQHP
PRKSQHRRAFGKASVHTTPALKKQSGVQHSNGSRNRDGMLPVHQRG
>PD1218 rnhA, ribonuclease H
MKLINAYTDGSCLGNPGPGGWAVLLRYKNNEKELVGGELDTTNNRMELMA
AIMALERLSEPCQIKLHTDSQYVRQGITEWMSGWVRRGWKTAAGDPVKNR
DLWERLCAATQRHMIEWCWVKAHNGDSDNERVDVLARGQAMAQRSTVASR
>PD0321 rnhB, ribonuclease HII
MVSKFDTQHLLNSNTALVAGVDEAGRGPLAGPVVVAAVVFDPSQPHINGL
NDSKQLSPACRERLYAHIVERALAYKVVMIDSTQIDTLNIYQATMLGMRL
AVEGVAHVAKSARIDGNRLPKNLPCPAEALVGGDARDPTIMAASILAKVT
RDRHMVELHLQYPHYGFDKHKGYGTPAHLAALAEHGPCLEHRQSFAPVRR
MLTPKAIHARQSAHQHNENSPTKAAFNMLIERDD
>PD1207 rnt, ribonuclease T
MMNQSITPPTHPPMSQRFRGYLPVVVDVETGGFNWNHHALLEIACIPIEM
DDTGRLYPGEVTSTHVIPAPGTDIDPKSLEVTGIILDHPFRFAKEEKLAL
EHIFTPVRTTMKKYKCQRAILVGHNAHFDLNFLNAAVTRTAYKRNPFHQF
SVFDTVTLAGMAYGQTVLARAVQAAGLDWNAADAHSAVYDAEKTAHLFCT
ITNIWPLMVAG
>PD0887 ruvA, holliday junction binding protein, DNA helicase
MIGRLRGVLTSKTPPWLVVDVCGVGYELEVPMSTFCELPDVGYEVNLFTH
YTQKDDSAALYGFLSESERRLFRHLQRVSGIGTKIALAILSSVSVDTFAG
LIQAGDANALTVIPGVGKKTAERMLVELRDRAADFNNGISTSGKLNLDTV
SEAALALQQLGYKPAEAARMARDAGTESDDVAIVIKKALQTVLR
>PD0889 ruvB, holliday junction binding protein, DNA helicase
MDRIIDSAATREDEAIEVSIRPKRLADYLGQQPVREQMDIYIQATKARAE
ALDHVLIFGPPGLGKTTLSHVIAYELGVKLRVTSGPVIEKAGDLAALLTN
LQPYDVLFIDEIHRLSPVVEEVLYPAMEDFQIDIMIGEGPAARSIKIDLP
PFTLIGATTRTGLLTAPLRDRFGIVQRLEFYSPEDLARIVRRSAGILNID
CTTEGAAEIAQRARGTPRIANRLLRRVRDYAEVKADGQITIEVAQAAMQM
LKVDQGGFDELDRRLLHTIVEYFDGGPVGIESLAASLSEERGTLEDVVEP
YLIQQGFLVRTARGRMATDKAYQHLALQPRERVSAFTDPEDLF
>PD0886 ruvC, holliday junction resolvase, endodeoxyribonuclease
MTRILGIDPGSQRTGVGVIDVDEYGCSHHVYHAPLVLLGQSSFAGRLKQL
LLGLSAVIEEYSPKEVAIEKVFMSKNADSALKLGQARGVAISAVVLRDLP
VHEYAARQIKLAVVGRGGADKQQIQHMVGVMLNLQGRLQSDAADALAVAI
THAHVSATAQRLGVSTKQAWSRK
>PD0793 sbcB, exodeoxyribonuclease I
MQYHYSTHSSPQILRTMPPSFLFYDLETFGQDPRRTRIAQFAAVRTDTQL
NVIEEPISFLVKPADDLLPSPYATLITGITPQHAQREGINEAAAFAHIAM
QMTQPHTCSLGYNTLRFDDEFIRYGLFRHFYDPYEREWRNGNSRWDLLDM
LRLMHAVRPEGIHWPTREDGAPSFKLEHLALANHAREGTAHEALSDVYAT
ISMARKFRAAQPRLWNYALQLRDKRFCANLLDITSIQPVLHISQRYPATQ
HCAAAVLPLTTHPHINNRIIVFDLNGDIDTLLRLSAEDIADHLYTPALDL
PEGEQRIPLKEVHLNKVPALIAWNHLRASDFTRLGMDPSMLETKAAQLRA
CGPDLAEKVRNVFSHTYNTANDADASLYDGFLTEEDRRLLPQLRASSPDT
LVTFEQRLRDPRLIELLFRYRARNFPETLSCDEQTRWDTYRRRRLTTDTG
LSELTFDQYHAQIAELRITHSQDATKQTLLDQLAAWGSELSRTL
>PD1765 smf, DNA processing chain A
MASPSHSDSKDTDALLRLVLAGGRSAPRRQLLDYHGTPHAALAAGPNAWR
ASGCNTMQCTRLVAPDPNAMARIQHWLATPYHHLLGWHDPDYPPLLRHVP
SPPLALFIAGNPILLWHASIAIVGSRQPSAGGLDHSYGFAQALAARGLGI
ISGMAAGIDATAHEAALSIPSGHTVAVLGTGPDVPYPARHKKLHARITTD
GAVISEYPPGTQPRAAHFPQRNRIIAGLALGTLVVEAGARSGALITARLA
AEAGRAVFAVPGSLHNPMTRGCHQLIRQGATLVQDIDQILEDVATLAAPL
AHTLRERLDAPSWPVAPLLSTPNSKDPKYHTLWQALAHDPMSMDSLIDRT
GLTAATLSSMLLTLELEGKVVVEHGRYTRTA
>PD0626 ssb, single-stranded DNA binding protein
MARGINKVILVGNLGNDPDIKYTQGGMTITTISLATTSVRKDKDGNTQER
TEWHRVKFFGKLGEIAGEYLRKGSQCYIEGSIRYDKFTGQDGQERYVTEI
VADEMQMLGGRSDGGGMGGGGERPQRQTSQRQDYAPRRQTRQPSQSPQSS
PPPMDDFADDDIPF
>PD1017 ssb, single-stranded DNA binding protein
MARGINKVILVGNLGNEPDIKYTQSGMTITNISLATSSKRKDREGNTQER
TEWHRVKFFGKLGEIAAEYLHKGSQCYIEGAIRYDKFTGNDGQDRYVTEI
IADQMHMLGGRGEGSSGITPQRRPAKVRNNDKAYAYAGDDFHDDAPPF
>PD1603 ssb, single-stranded DNA binding protein
MARGINKVILVGNLGNEPDIKYTQSGMTITSISLATSSKRKDREGNTQER
TEWHRVKFFGKLGEIAAEYLHKGSQCYIEGTIRYDKFTGNDGQDRYVTEI
IADQMHMLGGRGEGSSGITPQRRPAKVRNNDKAYAYAGDDFHDDDIPF
>PD0700 sss, site-specific recombinase
MSRLVEDFFAFLHVERGMSSHTLDAYRRDIGALIAWGGQQAVGEVVALDR
AQLQAFVSAEHRRGLSAKSLQRRLSACRGFYTWLVKRGHIAVNPAAGLRA
PKALRKLPRILDADEAVSFVQIPTDTPLGLRDRALLELFYSSGLRLSELC
GLRWDGLDLDAGLVSVLGKGSRQRVVPVGSYALSALREWCASSGGGAQQP
VFPGRYGGPISARAVQVRIKQLAQRQGMAKHVHPHMLRHSFASHLLESSG
DLRGVQELLGHADITTTQIYTHLDFQYLSKVYDAAHPRARRKAR
>PD1333 tnp, IS1327 transposase
MQAPPGRTTPDDPIFLSASLRVLLLKSFCRLHYPADIIAQCVRWYLAYAL
SLRNVEEMMAERGIAVDHYTLHRWVIRLLPLLDMAFHRHKRPVGSHWRMD
ETYIKVKGQWKYLYRAVDTAEQTIDFLLTARQDAVVALRFFHKAIRHHGE
PEVVAIDKSGTNTSALAALNADKPDEEAIQLISGKAST
>PD1767 topA, DNA topoisomerase I
MPKHLLIVESPAKAKTINKYLGKDFTVLASYGHVRDLVPKEGAVDPENGF
AMRYDLIDKNEKHVEAITKAAKTADSIYLATDPDREGEAISWHISEILKE
RGLLKDKPMQRIVFTEITPRAIKEAIQKPRMIASDLVDAQQARRALDYLV
GFNLSPVLWRKVQRGLSAGRVQSPALRMIVEREEEIEAFITREYWSIHAE
CTHPAQHFSAKLIKLDGKKFEQFTITDSDTAAAAQRRIQQAAQGRLHITD
VTNKERKRRPAPPFITSTLQQEASRKLGFTTRKTMQIAQKLYEGIALGEE
GSVGLITYMRTDSVNLSLDALSEIRDIIARDYGTNALPDKPNVYTTKSKN
AQEAHEAVRPTSALRTPTQVAPYLSNEEHRLYELVWKRTVASQMIPAILN
TTSVDLAAGNEHVFRATGTTVVVQGFLAVYEEGKDNKNAEDDDEGRKLPV
MKTGENVPLERILTEQHFTQPPPRYTEAALVKALEEYGIGRPSTYASIIQ
TLLFRKYVDMEGRSFRPTDIGRAVSKFLSSHFTQYVDYDFTAHLEDELDA
ISRGEEEWIPLMKKFWVPFKELVEDKKDSLDKTDAGSVRLLGIDPTSGKE
VSARIGRFGPMVQIGTVDDEEKPRFASLRPNQSIYSISLEEAIELFKMPR
VLGEDQSQQVSVGIGRFGPFAKRGSTYVSLKSEDDPYTIDLARATLLINE
KEEIARNRIIKDFENSQIQVLNGRFGPYISDGKLNGKIPKDREPASLTLE
EAQQLLINTGKPARKNFSTKKTATKNETRKQTTKKRTTDAKATKKVSDKP
VKKQIKKRIAPNITQ
>PD1023 traE, truncated conjugal transfer protein
MTGKSEGYIECGHDTITWCFGHMLEQAEPDAYISEDVPLNPKTGKKIWRV
EELPIIPETWIMQPREDAKAQLEVIKRLLKKATEIVNAGDPDREGQLLVD
EVLEYFDCHKSVQRFWVSAQDSVSVQLDLAALRSNTEYQGFANAARARSR
ADWLIGINFSRAYTLRAQRGGSRALLTIGRVQTPTLALVVMRDRESEAFK
SIPYHTIRAAFKHEGGVFVAVWRAKEDQVGLDPEGRLVDTVIANTLVESI
TGHIGKVIKYKQEPKKKAQPRAYSLSEITLLASNKFGYSAADVLEVCQSL
YETHKLTSYPRTDCG
>PD2049 ung, uracil-DNA glycosylase
MNEQGKAINSSAESRIQLESSWKAHVGNWLLRPEMRDLSSFLRARKVAGV
SVYPPGSQIFAAFEATPFQRVKAVILGQDPYHGQGQAHGLCFSVRPGMPL
PPSLLNIYKELEEDLGLLRPDHGCLLPWAKRGVLLLNAVLTVEDGRAGAH
QGKGWEGFTDHVVDTLNREREGLVFMLWGSYAQAKGKAIDTRRHLVLKAP
HPSPLSAHRGFLGCRHFSLCNQYLSQHGLGMVDWSLPPCIALDGAILNGR
IAV
>PD1444 uvrA, excinuclease ABC subunit A
MTALIRIRGARTHNLKNLDLDLPRNTLIVITGLSGSGKSSLAFDTIYAEG
QRRYVESLSAYARQFLSVMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVG
TITEIYDYLRLLYARVGQPRCPEHHYPLEAQTVSQMVDHVLTLDPEQRYM
LLAPVVRERKGEHTQVFEQLRAQGFVRVRVDGELYEIDAVPTLTLRQKHT
IEAVIDRFRPREDIKQRLAESFETALKLGNGMASVQTLDTTTATPHLFSS
KYSCPVCDYSLPELEPRLFSFNAPMGACPACNGLGVTEFFDPAKVVIHPD
LSLSAGAVRGWDRRNAYYFQLIASLAKHYTFDIDASWESLPEEIRHTILF
GSGDEQINFTYLTEAGGRTKRKHRFEGIVPNLERRYRETESAAVREELAK
YVSTRTCPECGGTRLNRAARNVFVADRTLPELTVLPINDALEFFKTLRLS
GWRGEIAIKIVKEIGERLGFLVDVGLDYLTLERKADTLSGGEAQRIRLAS
QIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLTRLRDLGNTVIVVEHDED
AIRQADHILDIGPGAGVHGGEICAQGSLEQIMAAPRSLTGQYLSGRRRIE
IPKQRHPPNATKMLHLRGACGNNLKGVNLDIPEGLFTCITGVSGSGKSTL
INDTLFTLAANEINGASHPIAPYASVDGLELFDKVVDIDQSPIGRTPRSN
PATYTGMFTPLRELFAQVPEARARGYSPGRFSFNVRGGRCEACEGDGLIK
VEMHFLPDVYVPCDICHGKRYNRETLEIRYKGYNINDVLEMTVEDALKLF
EAVPAIARKLETLVDVGLSYLKLGQSATTLSGGEAQRVKLSKELSRRDTG
HTLYILDEPTTGLHFYDIEALLAVMHKLRDAGNTVIVIEHNLDVIKTADW
VIDLGPEGGGRGGEILVAGTPETVAAHPHSHTGHFLAKLLPPKDVSNCGH
RNPKEEVDIAKTVHR
>PD1734 uvrB, excinuclease ABC subunit B
MTGLFQLVSSYSPSGDQPAAVQKLVTNFHAGIAKQVLLGVTGSGKTYTIA
NVVEQIQKPTLVMAPNKTLAAQLYGEFKAFFPHNAVEYFVSYYDYYQPEA
YVPASDTFIEKDSSINEYIEQMRLAATKALLSRSDVLVVATVSAIYGLGA
PEDYLSLRLILSLGEHIEQRQLIRHLTELQYTRNELDLVRGSFRVRGEVV
DVFPAESEMEALRIELFDGEIESLSLFDPLTGQTVRKLQRFSVYPKTHYA
TTRERTLSAVDTIKDELKEYLELLYGRNKLVEAQRLAQRTQFDLEMMAEV
GYCNGIENYSRHLTGKAPGEPPPTLFDYLPPDALLVIDESHVTIPQIGAM
FKGDRSRKETLVEFGFRLPSALDNRPLRFEEWEVRSPRSIYVSATPGSYE
FRESAGEVIELLVRPTGLIDPEIEIRPVATQVDDLISQINACIKLGDRVL
VTTLTKRMAENLTEYLSEQGIRIRYLHSEIDTVERVEIIRDLRLGKFDVL
VGINLLREGLDMPEVSLVAILDADKEGFLRSTSSLIQTIGRAARSVRGRA
ILYADKVTRSMRAAIDETERRRQKQKEYNAENGIVPKSVVRPISDILEGA
RDGVEVKSKGKGRRVDEVPADYGALNQAEIAAQMKVLEQKMYQHARDLEF
EDAARIRDQIQRLREAGLG
>PD1325 uvrC, excinuclease ABC subunit C
MTDNAPITFDGKRFAAHLSTAPGVYRMYAADDTLLYVGKAGALRKRVASY
FNGTPKNTRLTAMLAQVVRMDVTITRNEAEALLLENQLIKSLTPRYNVLL
RDDKSYPYVLLTREAWPRIALHRGPQIVPGRYFGPYPGMTAVRDMLNLIH
KLFKLRSCEDSVFRNRSRPCLQYQIGRCSAPCVNVVTHDNYTEAVHRVTL
FLEGKSDLLAEELIQAMQVASEHLEFEQAARLRDLLTSLRSMQNRQYVDG
RAADLDVLACAALSGHACVLLLSFRDGRNLGTRMFFPKTNGEERTAEILS
AFVSQYYAEYPPPPEILLDQEIPDHTLLEAAFSRSSAHKISLRWNVRGER
AGYVELAVRNAQVALSTELTSQRAQRVRSEAVRQLLGLEGPIKRVECFDI
SHTMGEATVASCVVFDAVGPVRSQYRRYNITGITPGDDYAAMRQAIERRF
RRAVEEDKQGERPDVLFIDGGAGQLAQAKMALNAVGVESVLLVGVSKGEE
RRAGHETLIMLDGQELHPGAASPALQFIQQVRDEAHRFAITGHRARRQKT
RMTSKLEDIPGIGSRRRANLLKHFGGLAGVKAAGQTEIARVEGISTALAA
KIYASLHGLSKNDAANASRVS
>PD0037 uvrD, DNA helicase II
MNVSHVLYHLNQNQREAVAAAPGHYLILAGAGSGKTRVLTHRIVWLNEVN
GVPTHSMMAVTFTNKAAGEIQQRIDLQLRHGKRGMWIGTFHSLAHRLLRL
HWNDATLPENFQVIDSDDQLRLVKRVIQSLGLNDTLFPPKQAMWWINTQK
DEGRRPEHIQPESHDDWIETQRRIYTEYQERCNRAGLVDFSELLLRAHEL
LRDTPALLTHYRSRFREILIDEFQDTNAIQYAFVRVLANDTGHIFAVGDD
DQAIYGWRGAKVEHVQHFLKDFPNVQTIRLEQNYRSSANILDAANAIIAH
NPDRIGKRLWTESGVGESIDLYAAYNEIDEARYIVERARQWVRDGGSYGE
IAVLYRSNAQSRAFEEVLQSEHIPYRVYGGMRFFERAEIKDALAYLRLLA
NRSDDAAFERVVNTPVRGIGERTLDEVRHLARTQGLALWDAAMACTQSTT
LTARARNALASFLNLLQQLALETNQMDLAERIDHMLQRSELRQHWKKEAR
GSLDAESRQENLDELVSVASRFVLPQNDEDTPIMTELDAFLSYACLESGD
GQVQAGEEGVQLMTLHSAKGLEFPLVFLVGLENGLFPSARSLDEHGRLEE
ERRLAYVGITRARHKLILSYAQARRIHGKDNYNVPSRFLREIPQDLLHEV
RPTIQVSHQPPLGATQRPAHDERDAAPIKLGVNVIHPTFGCGVVVDYEGS
GVHTRVQIKFDDAGTKWLVMAYAKLSVV
>PD0652 xerD, integrase/recombinase
MTLRTTNQRRQLARQQPPLLPEDATTIAHCLDALWIKHGLSRHTLNSYRR
DLEGLARWNNGRAGPLATLTPPALLDYLTWRTQQHYSPLSNARLRSVLRT
FFSYAVECGWRNDNPSTLLAHPVLPHPLPKALTESQIEALLAAPSIETPE
GLRNRAMLELMYAAGLRVSELVTLPVAMLNQRQGVLRITGKGGKERLVPL
GEESQHWLQRYLEQARPSLAADKPIPADSDGDVPLFINTNLKRLSRQQFW
RWIKHYAALVGIAPNKVSPHVLRHSFATHLLNHGADLRALQMLLGHRSIS
TTQIYTLIARQHLQQLHAQHHPRG
>PD1901 xseA, exodeoxyribonuclease VII large subunit
MQHRDEILTPSQLNTLARDLLESAFPLVWIEGELGNVSRPSSGHLYVTLK
DAQAQVRCAMFKPKSQWLTFQPREGLRVLARGRLTLYEARGDYQIVLDHL
EESGEGALRRAFEQLRIRLEAEGLFDPARKQPLPVHPRRIAVITSPSGAV
IRDILSVLMRRFPLVEIELLPSLVQGDTAAAQITHLLGGADSSGRYDAIL
IARGGGSLEDLWAFNNEQLARTIAAAHTPVISAIGHETDFTLADFAADIR
APTPSVAAELLVPDQRALRQHLGQLQQRLLHLQQHRLDQAIQRADQLGLR
LQARNPEMHLRLLAQRQAEAGRRLQQCLHHVLDRAQGQLRNHHTRLYALN
PRQQIAGLQKHLKHLNPQQPLQRRLQQEQLRLHGLVRALEAVNPLATVAR
GYALVRRADNNTLVRDSAQVCVGDVLDTKLAHGQLRVRVEISST
>PD1513 xseB, exodeoxyribonuclease VII small subunit
MPKRSPPDTSPVARFEQSLQELEQLVQNMETGALSLEQSLGAYERGIALY
RECHQALEQAQLRVRILSDPMHPDDGEPFDPSLVSTSQ
>PD0864 xthA, exodeoxyribonuclease III
MRIASWNVNSLNVRLSQLQQWLVEAAPDVLGLQETKLEDHQFPEAALAAL
GYVSVYAGQKTYNGVALLARVALEDVQVGIPEFEDVQRRVIAATVDGIRV
VNLYVVNGQEVGTDKYAYKLSWLDAVYHWLAEELQRYPRLVVLGDFNIAP
DARDVYDPQVWNEDHILTSTTERAALDKLLGLGLHDGFRLHHQDAGIFSW
WDYRQASFRRNRGLRIDLTLVSEALRAQAVASGIDRVPRGWERPSDHAPA
WIELALAVSSSP
>PD0145 yjjV, deoxyribonuclease
MNVVLIDSHCHLDADTFDGDRAEIIARARAAGIIAQVIPAVTAAKWPKLR
TICTQTSGLYPAYGLHPMFLTEHHPTHLHALRDWLERERPCAIGECGLDF
YLEGLNREMQHTYFISQLMLAREYTLPVIVHARHAVEEVIASIKTVGTLR
GVVHSFSGSLEQARQLWKLGFMISLGGAMTYPRAHRLHRLAMETPLDCLL
LETDAPYQPDSEIRGKRNEPGRLLTILDYIATLRKQDRTEISKVTRANTE
QLFGLKVTST
>PD1798 yoaA, ATP-dependent helicase
MLSRASIEALSDGGLLARQLDNFVPRPGQQRLTAAIGEVFEQRNILLAEA
GTGTGKTFAYLVPTLLSGLKTIISTGTRALQEQLYHRDLPRVRAALGVDL
RSALLKGRTNYVCKYRLEQTCAAPHLGTAEQTTQLQRILTWSGRTQFGDM
AELDTLPDDSPLLPLVTSTLDNCLGKDCPFWNECFVVQARQRAQAADVVV
VNHHLLLADLALKQEGFGEILPGAQAFIIDEAHQLPALAANFFGESFGMR
PLQELGRDCMIEARSVAGAQAALQHSVWQLEQALRTLRAAMEGLPSRGTQ
SRLLAKPEVCEGFETLITALTSLHSLLVPLRSAAAGLDACAARAQEALSR
LLRWLGETAETSGLEGDTPSNNDVLWYELTQRGFRCQRTPLDVSAQLQAH
RETSMAAWVFTSATLAVDGRFEHIARRLGLNHPMTLLQPSTFDWARQALC
YLPPGLPNPAAHGFGATLIEALIPVLEASSGRAFLLFASHRALREAATAL
RGGPWPLFVQGDAPRATLLDRFRVSGNGLLLGSASFREGVDVAGEALSVV
VIDKLPFTAPDDPVFEARLEAIRQEGGNPFFDEQLPQAVIALKQGVGRLI
RSESDRGVLVLCDPRLLSKSYGRIFLDSLPSFPQTRDIAEVRAFFNGSNT
APTESRHDSPISHRQASGVDRIG