TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-07 08:34:45

Gene list

Applied filters:

COG category: Replication, recombination and repair
Organism: Xylella fastidiosa Temecula1, Temecula1

Number of genes found: 131

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Xylella fastidiosa Temecula1, Temecula1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PD1730 phage-related proteinchromosome CDS2017510 1419 + 0.566596
NA PD0673 ATPasechromosome CDS826068 1362 + 0.544787
NA PD1649 DNA modification methylasechromosome CDS1908267 525 - 0.453333
NA PD0804 conserved hypothetical proteinchromosome CDS992100 588 - 0.530612
NA PD0382 phage-related proteinchromosome CDS464933 1419 + 0.568006
NA PD0801 conserved hypothetical proteinchromosome CDS989672 222 - 0.5
NA PD1014 phage-related proteinchromosome CDS1212782 1653 + 0.571688
NA PD1324 site-specific DNA-methyltransferasechromosome CDS1552066 732 - 0.579235
NA PD0225 conserved hypothetical proteinchromosome CDS288771 660 + 0.557576
NA PD0939 phage-related proteinchromosome CDS1139390 1176 - 0.477891
NA PD0857 histone-like proteinchromosome CDS1066798 393 - 0.473282
NA PD1213 KDO kinasechromosome CDS1414311 780 - 0.532051
NA PD1561 replication related proteinchromosome CDS1809886 702 - 0.564103
NA PD0923 phage-related proteinchromosome CDS1128417 1191 + 0.474391
NA PD0154 hydrolasechromosome CDS196155 558 - 0.541219
NA PD0274 conserved hypothetical proteinchromosome CDS351208 603 + 0.588723
NA PD1586 conserved hypothetical proteinchromosome CDS1834869 366 - 0.551913
NA PD1137 phage-related proteinchromosome CDS1328703 1419 + 0.561663
NA PD0910 phage-related proteinchromosome CDS1120075 1191 + 0.474391
NA PD2023 conserved hypothetical proteinchromosome CDS2380069 2208 - 0.581069
NA PD0712 transposasechromosome CDS874142 93 + 0.483871
NA PD1415 conserved hypothetical proteinchromosome CDS1650539 273 + 0.479853
NA PD1429 DNA helicasechromosome CDS1660432 3573 + 0.560313
NA PD1601 conserved hypothetical proteinchromosome CDS1853175 1056 - 0.635417
NA PD0835 conserved hypothetical proteinchromosome CDS1033883 2523 + 0.571145
NA PD1275 conserved hypothetical proteinchromosome CDS1487117 468 - 0.594017
NA PD1606 hypothetical proteinchromosome CDS1857865 795 + 0.642767
NA PD1194 phage-related proteinchromosome CDS1389925 1419 + 0.568006
NA PD0121 conserved hypothetical proteinchromosome CDS154621 573 - 0.509599
NA PD0789 resolvase/integrase-like proteinchromosome CDS976797 849 + 0.575972
NA PD1321 phage-related proteinchromosome CDS1550281 168 - 0.511905
alkA PD0572 DNA-3-methyladenine glycosidasechromosome CDS701692 651 + 0.546851
alkB PD0550 alkylated DNA repair proteinchromosome CDS675267 603 + 0.529022
comE PD1558 DNA transport competence proteinchromosome CDS1807111 330 - 0.469697
dcm PD0577 site-specific DNA-methyltransferasechromosome CDS708396 1068 - 0.572097
deaD PD0205 ATP-dependent RNA helicasechromosome CDS261295 1848 - 0.570887
dinJ PD1099 DNA-damage-inducible proteinchromosome CDS1298233 264 + 0.583333
dnaA PD0001 chromosomal replication initiatorchromosome CDS146 1320 + 0.412879
dnaB PD1701 replicative DNA helicasechromosome CDS1979353 1416 - 0.504237
dnaE PD0165 DNA polymerase III alpha chainchromosome CDS209003 3582 - 0.547739
dnaG PD1647 DNA primasechromosome CDS1905556 1734 + 0.55594
dnaN PD0002 DNA polymerase III beta chainchromosome CDS1747 1101 + 0.374205
dnaQ PD1217 DNA polymerase III epsilon chainchromosome CDS1418214 720 - 0.513889
dnaX PD1059 DNA polymerase III subunits gamma and tauchromosome CDS1261440 1632 - 0.515931
dpnA PD1339 DNA methylasechromosome CDS1565808 714 - 0.570028
dpoL PD1727 phage-related DNA polymerasechromosome CDS2014684 2181 + 0.627235
dpoL PD1134 phage-related DNA polymerasechromosome CDS1325715 2181 + 0.627235
dpoL PD1322 phage-related DNA polymerasechromosome CDS1550516 1134 + 0.620811
exoA PD0128 exodeoxyribonucleasechromosome CDS163969 801 + 0.481898
fis PD0811 DNA-binding proteinchromosome CDS999260 273 - 0.512821
gyrA PD1935 DNA gyrase subunit Achromosome CDS2273232 2682 - 0.556674
gyrB PD0005 DNA gyrase subunit Bchromosome CDS4743 2445 + 0.466667
himA PD1910 integration host factor, alpha subunitchromosome CDS2240030 300 - 0.46
himD PD1455 integration host factor, beta subunitchromosome CDS1695967 315 - 0.495238
holA PD1232 DNA polymerase III delta subunitchromosome CDS1435180 1032 + 0.546512
holB PD1498 DNA polymerase III delta subunitchromosome CDS1738698 972 - 0.549383
holC PD0104 DNA polymerase III holoenzyme chi subunitchromosome CDS133969 426 - 0.605634
hrpA PD0619 ATP-dependent helicasechromosome CDS759506 4437 + 0.571557
hrpB PD0505 ATP-dependent helicasechromosome CDS606429 2511 - 0.571087
hsdR PD2074 type I restriction-modification system endonucleasechromosome CDS2457629 3024 - 0.516865
hupB PD0475 histone-like proteinchromosome CDS569629 285 + 0.487719
int PD1495 phage-related integrasechromosome CDS1737843 411 + 0.527981
int PD1075 phage-related integrasechromosome CDS1276043 1194 - 0.538526
int PD1019 phage-related integrasechromosome CDS1216888 1020 + 0.553922
int PD0384 phage-related integrasechromosome CDS466592 1020 + 0.529412
int PD0764 phage-related integrasechromosome CDS946367 1020 - 0.544118
int PD0990 phage-related integrasechromosome CDS1194756 1233 - 0.589619
int PD1139 phage-related integrasechromosome CDS1330522 1020 + 0.52549
int PD1196 phage-related integrasechromosome CDS1391744 1020 + 0.536274
ligA PD1940 DNA ligasechromosome CDS2279626 2496 - 0.580128
mfd PD0033 transcription-repair coupling factorchromosome CDS39807 3588 + 0.544314
mod PD0833 methyltransferase, type III restriction-modification systemchromosome CDS1032056 1629 + 0.519337
mttC PD0878 type V secretory pathway proteinchromosome CDS1089690 807 + 0.51425
mutL PD1897 DNA mismatch repair protein MutLchromosome CDS2223787 1866 - 0.578778
mutM PD0053 formamidopyrimidine DNA glycosylasechromosome CDS71282 816 + 0.520833
mutM PD0138 formamidopyrimidine DNA glycosylasechromosome CDS176365 816 + 0.520833
mutS PD1081 DNA mismatch repair proteinchromosome CDS1280970 2607 - 0.547372
mutT PD0663 dNTP pyrophosphohydrolasechromosome CDS812697 459 - 0.535948
mutT PD0527 mutator MutT proteinchromosome CDS644399 489 + 0.527607
mutY PD0882 A/G-specific adenine glycosylasechromosome CDS1093959 1050 + 0.515238
nfi PD0899 endonuclease Vchromosome CDS1108645 720 + 0.515278
nohA PD1110 phage-related packaging proteinchromosome CDS1306975 576 - 0.546875
nth PD1523 endonuclease IIIchromosome CDS1769355 639 - 0.513302
nudh PD1674 (di)nucleoside polyphosphate hydrolasechromosome CDS1943770 573 - 0.513089
ogt PD1975 6-O-methylguanine-DNA methyltransferasechromosome CDS2323200 519 + 0.518304
parC PD0594 topoisomerase IV subunit Achromosome CDS727421 2250 - 0.541778
parE PD0539 topoisomerase IV subunit Bchromosome CDS662603 1890 - 0.52381
polA PD0396 DNA polymerase Ichromosome CDS480267 2772 + 0.528139
priA PD2047 primosomal protein N'chromosome CDS2411294 2202 + 0.54178
radC PD0117 DNA repair proteinchromosome CDS149595 675 - 0.568889
rdgC PD1574 recombination associated proteinchromosome CDS1824373 909 + 0.513751
recA PD0093 recombination protein RecAchromosome CDS117832 1044 + 0.512452
recB PD1652 exodeoxyribonuclease V beta chainchromosome CDS1914257 3732 - 0.608789
recC PD1653 exodeoxyribonuclease V gamma chainchromosome CDS1917985 3366 - 0.609031
recD PD1651 exodeoxyribonuclease V alpha chainchromosome CDS1912108 1920 - 0.629687
recF PD0003 DNA replication and repair RecF proteinchromosome CDS3153 1095 + 0.410046
recG PD1705 ATP-dependent DNA helicasechromosome CDS1987389 2157 - 0.562819
recJ PD0402 single-stranded DNA exonucleasechromosome CDS490532 1842 + 0.549946
recN PD1373 recombination protein Nchromosome CDS1596661 1674 + 0.544205
recO PD1292 DNA repair protein RecOchromosome CDS1510093 732 + 0.534153
recQ PD0617 ATP-dependent DNA helicasechromosome CDS756923 1803 - 0.566833
recR PD1057 recombination protein RecRchromosome CDS1260324 597 - 0.566164
rep PD2041 ATP-dependent DNA helicase/DNA helicase IIchromosome CDS2400524 1977 - 0.508852
rhlB PD2053 ATP-dependent RNA helicasechromosome CDS2419308 1632 - 0.515319
rhlE PD0157 ATP-dependent RNA helicasechromosome CDS200530 1341 + 0.515287
rnhA PD1218 ribonuclease Hchromosome CDS1418930 453 - 0.520971
rnhB PD0321 ribonuclease HIIchromosome CDS413390 705 - 0.533333
rnt PD1207 ribonuclease Tchromosome CDS1409027 636 + 0.506289
ruvA PD0887 holliday junction binding protein, DNA helicasechromosome CDS1097492 585 + 0.507692
ruvB PD0889 holliday junction binding protein, DNA helicasechromosome CDS1100096 1032 + 0.522287
ruvC PD0886 holliday junction resolvase, endodeoxyribonucleasechromosome CDS1096885 522 + 0.511494
sbcB PD0793 exodeoxyribonuclease Ichromosome CDS980327 1485 - 0.56229
smf PD1765 DNA processing chain Achromosome CDS2055662 1146 + 0.574171
ssb PD1603 single-stranded DNA binding proteinchromosome CDS1855136 447 + 0.541387
ssb PD0626 single-stranded DNA binding proteinchromosome CDS773381 495 + 0.533333
ssb PD1017 single-stranded DNA binding proteinchromosome CDS1216175 447 + 0.557047
sss PD0700 site-specific recombinasechromosome CDS856356 885 + 0.550282
tnp PD1333 IS1327 transposasechromosome CDS1560919 567 + 0.522046
topA PD1767 DNA topoisomerase Ichromosome CDS2058300 2448 + 0.51634
traE PD1023 truncated conjugal transfer proteinchromosome CDS1221401 948 + 0.518987
ung PD2049 uracil-DNA glycosylasechromosome CDS2415990 762 - 0.514436
uvrA PD1444 excinuclease ABC subunit Achromosome CDS1680575 2898 + 0.543823
uvrB PD1734 excinuclease ABC subunit Bchromosome CDS2020607 2010 - 0.498507
uvrC PD1325 excinuclease ABC subunit Cchromosome CDS1553486 1866 + 0.551983
uvrD PD0037 DNA helicase IIchromosome CDS46613 2187 - 0.546411
xerD PD0652 integrase/recombinasechromosome CDS799772 975 - 0.566154
xseA PD1901 exodeoxyribonuclease VII large subunitchromosome CDS2230006 1335 + 0.593258
xseB PD1513 exodeoxyribonuclease VII small subunitchromosome CDS1758646 267 - 0.550562
xthA PD0864 exodeoxyribonuclease IIIchromosome CDS1074703 789 - 0.538657
yjjV PD0145 deoxyribonucleasechromosome CDS186039 783 - 0.521073
yoaA PD1798 ATP-dependent helicasechromosome CDS2099787 2022 + 0.586548