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2024-05-19 21:06:21

Gene list

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COG category: Replication, recombination and repair
Organism: Plasmid F

Number of genes found: 13

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Plasmid F
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
int RecName: Full=Probable site-specific recombinase; Plasmid F CDS35618 741 + 0.5722
resD resolvaseRecName: Full=Resolvase; AltName: Full=Protein D; Plasmid F CDS46866 807 + 0.57373
ssb single-strand DNA binding proteinRecName: Full=Plasmid-derived single-stranded DNA-binding protein; Short=SSB; AltName: Full=Helix-destabilizing protein; Plasmid F CDS58643 540 + 0.598148
tnpR RecName: Full=Transposon gamma-delta resolvase; AltName: Full=Transposon Tn1000 resolvase; Plasmid F CDS6415 552 - 0.445652
traI RecName: Full=Multifunctional conjugation protein TraI; Includes: RecName: Full=DNA relaxase TraI; EC=5.99.1.2; AltName: Full=DNA nickase TraI; AltName: Full=Transesterase TraI; Includes: RecName: Full=DNA helicase I; EC=3.6.4.12; Plasmid F CDS92673 5271 + 0.596282
yaaA RecName: Full=Transposase InsE for insertion sequence IS3fA; Plasmid F CDS66 300 + 0.5
yaaB RecName: Full=Transposase InsF for insertion sequence IS3fA; Plasmid F CDS362 867 + 0.551326
ybfA RecName: Full=Transposase InsE for insertion sequence IS3fB; Plasmid F CDS15158 300 + 0.503333
ybfB RecName: Full=Transposase InsF for insertion sequence IS3fB; Plasmid F CDS15454 867 + 0.546713
ybhB RecName: Full=Transposase InsD for insertion element IS2 on F plasmid; Plasmid F CDS17673 906 - 0.550773
ybiA RecName: Full=Transposase InsC for insertion element IS2 on F plasmid; Plasmid F CDS18536 411 - 0.508516
ybjA RecName: Full=Uncharacterized protein YuaL; Plasmid F CDS19245 210 + 0.395238
yfeA RecName: Full=Putative methylase YubD; EC=2.1.1.-; Plasmid F CDS54166 684 + 0.570175