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COG category: Replication, recombination and repair
Organism: Plasmid R100
Gene type: CDS

Number of genes found: 15

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# Plasmid R100

>gid:875510  insA  IS1 transposition protein
MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQP
GTHQKIIDMAMNGVGCRATARIMGVGLNTIFRHLKNSGRSR
>gid:875384  insA  IS1 transposition protein
MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQP
GTHQKIIDMAMNGVGCRATARIMGVGLNTIFRHLKNSGRSR
>gid:875511  insB  IS1 transposition protein
MPGNRPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYV
GAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMT
DGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSV
ELHDKVIGHYLNIKHYQ
>gid:875385  insB  IS1 transposition protein
MPGNRPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYV
GAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMT
DGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSV
ELHDKVIGHYLNIKHYQ
>gid:875374  intR  integrase for In2
MKTATAPLPPLRSVKVLDQLRERIRYLHYSLRTEQAYVHWVRAFIRFHGV
RHPATLGSSEVEAFLSWLANERKVSVSTHRQALAALLFFYGKVLCTDLPW
LQEIGRPRPSRRLPVVLTPDEVVRILGFLEGEHRLFAQLLYGTGMRISEG
LQLRVKDLDFDHGTIIVREGKGSKDRALMLPESLAPSLREQLSRARAWWL
KDQAEGRSGVALPDALERKYPRAGHSWPWFWVFAQHTHSTDPRSGVVRRH
HMYDQTFQRAFKRAVEQAGITKPATPHTLRHSFATALLRSGYDIRTVQDL
LGHSDVSTTMIYTHVLKVGGAGVRSPLDALPPLTSER
>gid:875368  istB  NTP-binding protein
MMQHEGHVRILKSLKLFGMAHAIEELGNQNSPAFNQALPMLDSLIKAEVA
EREVRSVNYQLRVAKFPVYRDLVGFDFSQSLVNEATVKQLHRCDFMEQAQ
NVVLIGGPGTGKTHLATAIGTQAVMHLNRRVRFFSTVDLVNALEQEKSSG
RQGQIANRLLYADLVILDELGYLPFSQTGGALLFHLLSKLYEKTSVILTT
NLSFSEWSRVFGDEKMTTALLDRLTHHCHILETGNESYRFKHSSTQNKQE
EKQTRKLKIET
>gid:875415  ssb  single strand DNA binding protein
MMGAENINRRRHIMAVRGINKVILVGRLGKDPEVRYIPNGGAVANLQVAT
SETWRDKQTGEMKEQTEWHRVVLFGKLAEVAGEYLRKGAQVYIEGQLRTR
SWEDNGITRYVTEILVKTTGTMQMLGSAPQQNAQVQPQPQQNGQSQSADA
TKKGSAKTKGRGRKAAQPEPQPQPPEGEDYGFSDDIPF
>gid:875359  tniA  transposase of In21
MATDTPRIPEQGVATLPDEAWERARRRAEIISPLAQSETVGHEAADMAAQ
ALGLSRRQVYVLIRRARQGSGLVTDLVPGQSGGGKGKGRLPEPVERVIHE
LLQKRFLTKQKRSLAAFHREVTQVCKAQKLRVPARNTVALRIASLDPRKV
IRRREGQDAARDLQGVGGEPPAVTAPLEQVQIDHTVIDLIVVDDRDRQPI
GRPYLTLAIDVFTRCVLGMVVTLEAPSAVSVGLCLVHVACDKRPWLEGLN
VEMDWQMSGKPLLLYLDNAAEFKSEALRRGCEQHGIRLDYRPLGQPHYGG
IVERIIGTAMQMIHDELPGTTFSNPDQRGDYDSENKAALTLRELERWLTL
AVGTYHGSVHNGLLQPPAARWAEAVARVGVPAVVTRATSFLVDFLPILRR
TLTRTGFVIDHIHYYADALKPWIARRERWPSFLIRRDPRDISRIWVLEPE
GQHYLEIPYRTLSHPAVTLWEQRQALAKLRQQGREQVDESALFRMIGQMR
EIVTSAQKATRKARRDADRRQHLKTSARPDKPVPPDTDIADPQADNLPPA
KPFDQIEEW
>gid:875377  tnpR  resolvase for Tn21
MTGQRIGYIRVSTFDQNPERQLEGVKVDRAFSDKASGKDVKRPQLEALIS
FARTGDTVVVHSMDRLARNLDDLRRIVQTLTQRGVHIEFVKEHLSFTGED
SPMANLMLSVMGAFAEFERALIRERQREGIALAKQRGAYRGRKKSLSSER
IAELRQRVEAGEQKTKLAREFGISRETLYQYLRTDQ
>gid:875490  traI  DNA helicase I
MLSFSVVKSAGSAGNYYTDKDNYYVLGSMGERWAGQGAEQLGLQGSVDKD
VFTRLLEGRLPDGADLSRMQDGSNKHRPGYDLTFSAPKSVSMMAMLGGDK
RLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSR
DQDPQLHTHVVVANVTQHNGEWKTLSSDKVGKTGFSENVLANRIAFGKIY
QSELRQRVEALGYETEVVGKHGMWEMPGVPVEAFSSRSQAIREAVGEDAS
LKSRDVAALDTRKSKQHVDPEVRMAEWMQTLKETGFDIRAYRDAADQRAE
IRTQAPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPE
NGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIM
KQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVA
ELVMMAREQGREVQIIAADRRSQMNLKQDERLSGELITGRRQLQEGMVFT
PGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAM
KDAGVNTYRWQGGEQRPATIISEPDRNVRYDRLAGDFAASVKAGEESVAQ
VSGVREQAILTQAIRSELKTQGVLGHPEVTMTALSPVWLDSRSRYLRDMY
RPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDS
SWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVP
GRAEPATLPVADSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNA
TLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKARAGETSLE
TAISLQKTGLHTPAQQAIHLALPVLESKNLAFSMVDLLTEAKSFAAEGTG
FTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEG
KEAVTPLMERVPGELMETLTSGQRAATRMILETSDRFTVVQGYAGVGKTT
QFRAVMSAVNMLPASERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDT
QLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDT
DQLQAIAPGQPFRLQQTRSAADVVIMKEIVRQTPELREAVYSLINRDVER
ALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGET
FPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDAREK
AGELGKEQVMVPVLNTANIRDGELRRLSTWENNPDALALVDSVYHRIAGI
SKDDGLITLEDAEGNTRLISPREAVAEGVTLYTPDKIRVGTGDRMRFTKS
DRERGYVANSVWTVTAVSGDSVTLSDGQQTRVIRPGQERAEQHIDLAYAI
TAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNR
QGWTDAINNAVQKGTAHDVLEPKPDREVMNAQRLFSTARELRDVAAGRAV
LRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDD
GNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPD
SGVVVRIAGEGRPWNPGAITGGRVWGDIPDSSVQPGAGNGEPVTAEVLAQ
RQAEEAIRRETERRADEIVRKMAENKPDLPDGKTEQAVREIAGQERDRAD
ITEREAALPESVLRESQREQEAVREVARENLLQERLQQIERDMVRDLQKE
KTLGGD
>gid:875365  yahA  possible transposase of IS1353
MYSYEDRLRAVRLYLKLGRRMSATLRQLGYPTKNSLKAWLAEFERNQDLR
RGYQRIKRQYTDEQKQRAVDHYIEQGYCLSHTIRSLGYPSREALRAWIRD
LRPEFARTVVGSSAPTVARSRLEKQQAVIALNLRVGSAKDVADTVGVSRP
TLYNWQHRLLGKVPLKPMTKKKGDTSLEQRHEALLRELAELESQNQRLRM
ENAILEKASELIKKDMGINPLELTSREKTKVVDALRVTFPLANLLCGLKL
ARSTYFYQRLRQTRPDKYTQVREVIRTIFEDNYRCYGYRRIDSALRLGGM
RVSEKVVRRLMAQERLVVRTPRRRRFSAYAGDPTPAVPNLLNRDFHASAP
NTKWLTDLTEIHIPAGKVYVSPIVDCFDGLVVAWNIGTSPDANLVNTMLD
HAVRTLRPGEHPVIHSDRGSHYRWPAWIRRTENAQLTRSMSKKGCSPDNA
ACEGFFGRLKTELIYPRNWQHVTLKDLMTRIDAYIHWYNERRIKVSLGGR
SPIEYRHAVGLMSV
>gid:875401  ycgA  
MATFPGNAVDFILTDPPYLVGFRDRSGRTIAGDKTDEWLQPACNEMYRVL
KKDALMVSFYGWNRVDRFMAAWKNAGFSVVGHLVFTKNYTSKAAYVGYRH
ECAYILAKGRPRLPQNPLPDVLGWKYSGNRHHPTEKPVTSLQPLIESFTH
PNAIVLDPFAGSGSTCVAALQSGRRYIGIELLEQYHRAGQQRLAAVQRAM
QQGAANDDWFMPEAA
>gid:875420  ydgA  transposase of Tn10
MCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTELGRNLPT
KARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSD
IREQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASIL
PSNTTPLIVSDAGFKVPWYKSVEKLGWYWLSRVRGKVQYADLGAENWKPI
SNLHDMSSSHSKTLGYKRLTKSNPISCQILLYKSRSKGRKNQRSTRTHCH
HPSPKIYSASAKEPWILATNLPVEIRTPKQLVNIYSKRMQIEETFRDLKS
PAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWLAGVHAQKQGWDKHFQA
NTVRNRNVLSTVRLGMEVLRHSGYTITREDSLVAATLLTQNLFTHGYVLG
KL
>gid:875431  yedA  transposase of Tn10
MCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTELGRNLPT
KARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSD
IREQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASIL
PSNTTPLIVSDAGFKVPWYKSVEKLGWYWLSRVRGKVQYADLGAENWKPI
SNLHDMSSSHSKTLGYKRLTKSNPISCQILLYKSRSKGRKNQRSTRTHCH
HPSPKIYSASAKEPWVLATNLPVEIRTPKQLVNIYSKRMQIEETFRDLKS
PAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWLAGVHAQKQGWDKHFQA
NTVRNRNVLSTVRLGMEVLRHSGYTITREDLLVAATLLAQNLFTHGYALG
KL
>gid:875495  yigB  
MRKYIPLVLFIFSWPVLCADIHGRVVRVLDGDTIEVMDSRKAVRIRLVNI
DAPEKKQDYGRWSTDMMKSLVAGKTVTVTYFQRDRYGRILGQVYAPDGMN
VNQFMVRAGAAWVYEQYNTDPVLPVLQNEARQQKRGLWSDADPVPPWIWR
HRK