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# Chlamydophila pneumoniae TW-183, TW-183

>CpB0282 DNA gyrase subunit B
MDPKEKNYDASAITVLEGLQAVRERPGMYIGDTGITGLHHLVYEVVDNSI
DEAMAGYCSRIDVRILEDGGIVIVDNGRGIPIEVHERESAKQGREVSALE
VVLTVLHAGGKFDKDSYKVSGGLHGVGVSCVNALSEKLVATVFKDKKCYQ
MEFSRGIPVTPLQYVSVSDRQGTEIVFYPDPKIFSTCTFDRSILMKRLRE
LAFLNRGITIVFEDDRDVSFDKVTFFYEGGIQSFVSYLNQNKESLFSEPI
YICGTRVGDDGEIEFEAALQWNSGYSELVYSYANNIPTRQGGTHLTGFST
ALTRVINTYIKAHNLAKNNKLALTGEDIREGLTAVISVKVPNPQFEGQTK
QKLGNSDVSSVAQQVVGEALTIFFEENPQIARMIVDKVFVAAQAREAAKK
ARELTLRKSALDSARLPGKLIDCLEKDPEKCEMYIVEGDSAGGSAKQGRD
RRFQAILPIRGKILNVEKARLQKIFQNQEIGTIIAALGCGIGADNFNLSK
LRYRRIIIMTDADVDGSHIRTLLLTFFYRHMTALIENECVYIAQPPLYKV
SKKKDFRYILSEKEMDSYLLMLGTNESSILFKSTERELRGEALESFINVI
LDVESFINTLEKKAIPFSEFLEMYKEGIGYPLYYLAPATGMQGGRYLYSD
EEKEEALAQEETHKFKIIELYKVAVFVDIQNQLKEYGLDISSYLIPQKNE
IVIGNEDSPSCNYSCYTLEEVINYLKNLGRKGIEIQRYKGLGEMNADQLW
DTTMNPEQRTLIHVSLKDAVEADHIFTMLMGEEVPPRREFIESHALSIRI
NNLDI
>CpB0830 excinuclease ABC chain B
MTFQLHAPFAPCGDQPEAIARLSAGVRNQVKSQVLLGTTGSGKTFTIANV
VANVNLPTLVLAHNKTLAAQLYQEFREFFPNNAVEYFISYYDYYQPEAYI
ARSDTYIEKSLLINDEIDKLRLSATRSILERRDTLIVSSVSCIYGIGSPE
NYTSMALVLEVGKEYPRNILTAQLVKMHYQASPIPQRSAFRERGSVIDIF
PAYESELALRLEFLNDTLTSIEYSDPLTMIPKESVPSATLYPGSHYVIPE
AIREQAIRTIQEELEERMAFFDDRPIEKDRIFHRTTHDIEMIKEIGFCKG
IENYSRHFTGAPPGAPPTCLLDYFPEDFLLIIDESHQTLPQIRAMYRGDQ
SRKQSLVEYGFRLPSAFDNRPLTYEEAQKYFRKVIYVSATPGDTEVQESS
GHIVQQIIRPTGIPDPMPEIRPATGQVDDLLEEIRLRLSQKHEKILVISI
TKKLAEDMAGFLSELEIPAAYLHSGIETAERTQILTDLRSGVIDVLIGVN
LLREGLDLPEVSLVAILDADKEGFLRSTSSLIQFCGRAARNINGKVIFYA
DQKTRSIEETLRETERRRQIQLDYNKEHNIVPKPIIKAIFANPILQTSKD
SESPKESQRPLSKEDLEEQIKKYEALMQRAAKEFRFNEAAKYRDAMQACK
EQLLYLF
>CpB0008 HB1 protein
MRKLRILAIVLIALSIILIAGGVVLLTVAIPGLSSVISSPAGMGACALGC
VMLALGIDVLLKKREVPIVLASVTTTPGTGSPRSGISISGADSTIRSLPT
YLLDEGHPQSMRKLRILAIVLIVFSIILIASGVVLLTVAIPGLSSVISSP
AGMGACALGCVMLALGIDVLLKKREVPIVLASVTTTPGTGSPRSGISISG
ADSTIRSLPTYPLDEGHPQSMRKLRILAIVLIVFSIILIASGVVLLTVAI
PGLSSIISSPAEMGACALGCVMLALGIDVLLKKREVPIVVPAPIPEEVVI
DDIDEESIRLQQEAEAALARLPEEMSAFEGYIKVVESHLENMKSLPYDGH
GLEEKTKHQIRVVRSSLKAMVPEFLDIRRIFEEEEFFFLSARKRLIDLAT
TLVERKILTEQLERNNLRKAFSYLYQDSIFKKIIDNFEKLAWKFMILSKS
ICRFTIIFENHEHGVAKSLLHKNAVLLEKVIYRSLQKSYRDIGMSSAKMK
ILHGNPFFSLEDNKKTIMKEHAEMLESLSSYRKVFLALSDENVVDTPSDP
KKWDLSGIPCRDALSEISRDEQWQKKAHLKHQESLYTQARDRLTDQSSKE
NQKELEKAEQEYISSWERVKKFEIERVQERIQAIQKLYPNILEREEETTG
QETVTPTVQGTTASSDLTDILGRIEVSSREDNQNQESCVKVLRSHEVEMS
WEVKQEYGPKKKEFQDQMGSLERFFTEHIEELEVLQKDYSKHLSYFKKVN
NKKEVQYAKFRLKVLESDLEGILAQTESAESLLTQEELPILATRGALEKA
VFKGSLCCALASKAKPYFEEDPRFQDSDTQLRALTLRLQEAKASLEEEIK
RFSNLENDIAEERRLLKESKQTFERAGLGVLREIAVESTYDLRSLTNTWE
GTPESEKVYFSMYLNYYNEEKRRAKTRLVEMTQRYRDFKMALEAMQFNEE
ALLQEELSIQAPSE
>CpB0149 protein kinase
MESEKDIGAKFLGDYRILYRKGQSLWSEDLLAEHRFIKKRYLIRLLLPDL
GSSQPFMEAFHDVVVKLAKLNHPGILSIENVSESEGRCFLVTQEQDIPIL
SLTQYLKSIPRKLTELEIVDIVSQLASLLDYVHSEGLAQEEWNLDSVYIH
ILNGVPKVILPDLGFASLIKERILDGFISDEENRESKIKERVLLHTSEGK
QGREDTYAFGAITYYLLFGFLPQGIFPMPSKVFSDFIYDWDFLISSCLSC
FMEERAKELFPLIRKKTLGEELQNVVTNCIESSLREVPDPLESSQNLPQA
VLKVGETKVSHQQKESAEHLEFVLVEACSIDEAMDTAIESESSSGVEEEG
YSLALQSLLVREPVVSRYVEAEKEEPKPQPILTEMVLIEGGEFSRGSVEG
QRDELPVHKVILHSFFLDVHPVTNEQFIRYLECCGSEQDKYYNELIRLRD
SRIQRRSGRLVIEPGYAKHPVVGVTWYGASGYAEWIGKRLPTEAEWEIAA
SGGVAALRYPCGEEVEKSRANFFTADTTTVMSYPPNPYGLYDMAGNVYEW
CQDWYGYDFYEISAQEPESPQGPAQGVYRVLRGGCWKSLKDDLRCAHRHR
NNPGAVNSTYGFRCAKNIN
>CpB0629 putative methylase
MRILAGKYKGKSLKTFSNPHIRPTSGLVKEAFFSICREDIEGAAFLDLFA
GMGAIGFEALSRGAASVVFVDISIKAIQLIHTNSALLGEQLPVVIFRQDA
QSAIQRLIKQKRSFDLIYIDPPYELCNCYVETLLQKIVSGNILNPEGTLF
LENASDEEIACEGLTLRRRRKLGKTYLAEYIVEKDP
>CpB0700 hypothetical protein
MSIALNREEVWDNPRHLMFILMQFQQFSGEQDRFGSFLEATIRDRVSFLV
LQEKIATLK
>CpB0491 hypothetical protein
MAVGGVGGSRSPSPIPPNRRNSEDGKVSPKDNLGEHTVSSSDSSLASQGP
TIEERKAQLGGTDKIPLPSVKEPGDSQTSGRSGVLQRIWKGVKGVFKKTP
QARPEVSSPRLPSHVQHGQRLPGLEGFRDRIQKRSENPEADLGKMKRSYS
DGDLDRVGHDSNEDSTEDSRSEGGEPSSKSSSFLSGVRGATSTVQGALGD
AKEKVSAFGEQAAGAIRSAPGNIRTRFQRSSSEGDLSNVNKAAKHLRKAL
ENLEKVAPEQVSPEVASRVQSLLARMEQLTHQEPPTVEDLITFVESNVGS
DSVEYASIVPQDGSQAPAETAEAPETGGVEGSAAQGAWKALRDFVVSIFQ
AVASFFRAIASRLSSARRESAVDDLASESNTQWFVEQEGVSNPSAAPSLS
FAEEIARRAAEMSNRNAQSLEKLESGNVTDPVIQQGLGLARSFAPEGQ
>CpB0922 transcription-repair coupling factor
MAMDFNPVNLDFSISKEFKEETLPLLLENIHPGATAFLAAKMFHDCRASV
IMITTPARLDDLFENLRTFLDQAPVEFPSSEIDLSPKLVNIDAVGKRDHL
LYSLNQHRAPIFCVTTLKALLEKTRSPQATSQQHLDLAVGDVLDPEATTE
LCKSLGYSQVMLTSEKGEFSCRGGIVDIFPLSSPEPFRIEFWGEKIISIR
SYNPSDQLSTGKVSKISISPAYTEEASGGNYSHSLLDYFSTPPLYLFDNL
EILEDDFADISGTLSSLPDRFFSIGTLYDRISTSNQVYFSETPFPNVKNL
KENRVIIEAFHRNMEASRQAIPILYPEQIIQNDENPLLAFLQHLQEYMPP
HGKPLKLAIYSTKTKSLKEARALAETVARGDVEIYEKTGNLTSSFALVNE
AFAAISLSEFASTKVLRRQKQRTHFSVTTEEVFVPIPGETVVHIHNGIGK
FLGIEKKPNHLNIETDYLVLEYADKARLYVPSNQAYLISRYVGTSDKAAD
LHHLNSSKWKRSRDLTEKSLIVYAEKLLQLEAQRSTTPAFVYPPHGESVI
KFAETFPYEETPDQLKTIDQIYNDMMSPKLMDRLICGDAGFGKTEVIMRA
AVKAVCDGHRQVIVMVPTTILATQHYETFKERMAGLPIEIAVLSRFSQAK
VQKLICEQVASGQIDIIIGTHKLINKSLEFKNPGLLIIDEEQRFGVKVKD
NLKERYPMIDCLTVSATPIPRTLHMSLSGARDLSVIAMPPLDRLPVSTFV
MEHNTETLTAALRHELLRGGQAYVIHNRIESIYTLAETIRNLIPEARIGV
AHGQMGAEDLSNIFTKFKNQKTDILVATALIENGIDIPNANTILIDHADK
FGMADLYQMKGRVGRWNKKAYCYFLVPHLDRLSGPAAKRLAALNKQEYGG
GMKIALHDLEIRGAGNILGTDQSGHIGTIGFNLYCKLLKKAVSALKKHTS
PLLFNDDVKIEFPYNSRIPDTYIETGSMRIEFYQKIGNAESSEELTAIQE
EMRDRFGPLPQEICWLFALAEIRLFALQHGISSIKGTANALYVQKCLSKS
EQTKKTLPYALSPTPELLVKEVIESIERGFLINAS
>CpB0281 DNA topoisomerase IV subunit A
MFNKDEIIVPKNLEEEMKESYLRYSMSVIISRALPDIRDGLKPSQRRVLY
AMKQLSLSPGAKHRKCAKICGDTSGDYHPHGESVIYPTLVRMAQNWAMRY
PLVDGQGNFGSIDGDPPAAMRYTEARLTHSAMYLMEDLDKDTVDIVPNYD
ETKHEPVVFPSKFPNLLCNGSSGIAVGMATNIPPHNLGELIEATLLLLAN
PQASVDEILQVMPGPDFPTGGIICGSEGIRSTYTTGRGKIKVRARLHVEE
NEDKHRESIIITEMPYNVNKSRLIEQIANLVNEKTLAGISDVRDESDKDG
IRVVLEIKKGESSEIIINRLYKFTDVQVTFGANMLALDKNLPRTMSIHRM
ISAWIRHRKEVIRRRTRYELNKAETRAHVLEGYLKALSCLDALVKTIRES
GNKEHAKERIIESFGFTEPQALAILELRLYQLTGLEAEKIQKEYEELLNK
IAYYKQVLSDEGLVKDIIRNELQDLLKHHKVARRTTIEFDADDIRDIEDI
ITNESVIITISGDDYVKRMPVKVFKEQRRGGHGVTGFDMKKGAGFLKAVY
SAFTKDYLLIFTNFGQCYWLKVWQLPEGERRAKGKPIINFLEGIRPGEEL
AAILNIKNFDNAGFLFLATKRGVVKKVSLDAFSNPRKKGIRALEIDEGDE
LIAACHIVSDEEKVMLFTHLGMAVRFPHEKVRPMGRTARGVRGVSLKNEE
DKVVSCQIVTENQSVLIVCDQGFGKRSLVEDFRETNRGGVGVRSILINER
NGNVLGAIPVTDHDSILLMSSQGQAIRINMQDVRVMGRSTQGVRLVHLKE
GDALVSMEKLSSNENDDEVLSGSEEECSDTVSLR
>CpB0743 DNA gyrase subunit B
MAAYTEASILSLASLDHIRLRAGMYIGRLGNGSQKEDGIYTLFKEVVDNG
IDEFIMGHGKSLKISASDKQISIQDQGRGIPLGKLIDCVSKINTGAKYTQ
DVFHFSVGLNGVGLKAVNALSEIFSVRSVRKKKYHLATFHRGVLQESKQG
STKDPDGTFVSFTPDPSIFPEFTFNHDFLKDKIRQYTYLHSGLEIRFNDE
VFISHNGLKDLFDAEITEPPLYSPLFFQNEDLTFIFSHLEGNTERYFSFV
NGQETLDGGTHLTAFKEAIVKGVNEFFGKTFVSNDIREGIVGCIAIKIAS
PIFESQTKNKLGNTQIRSSLIKDVKEAIVQALRKDKVAPELLLEKIKFNE
KTRKNIQFIKQDLKSKQKKVHYKIPKLRDCKFHYNDRSLYGEASSIFLTE
GESASASILASRNPLTQAVFSLRGKPMNVFSLEETKMYKNDELFYLATAL
GITQNEIQHLRYNKVILATDADVDGMHIRNLLITFFLKTLLPLVENNHLF
ILETPLFKVRNKTTTLYYYSEQEKMQALQQFGKKDSSLEITRFKGLGEIS
PKEFAAFIGPEIRLTPVTITSLESISSILQFYMGKNTKERKQFIMDNLIT
DF
>CpB0620 methylated-DNA-protein-cysteineS-methyltransferase
MADDTLIPKLMKNSLSQACSEGLLIAKYPPLQVIVHFDNNLVVKTHLSVA
PVFSCLFLGPAAHKAMQEIVLWCSRYANKEHPPFSSHFAKDLIPSQYLEI
LNCVAEIPFGEQQTYAEIAKKTDTHPRTVGAACKQNPFLLFFPCHRVVGS
HGERNYVLGPVIHEILLKFENSY
>CpB0243 hypothetical protein
MSKPSSCKAYLGIDYGKKRIGLAYAAEPLLLTLPIGNIEAGKNLKLSAEA
LHKIILSRNITCVVLGNPLPMQKGLYSSLQEEVSLLAEELKKLSTVEIIL
WDERLSSVQAERMLKQDCGLSRKDRKGKTDSLAATLILTSFLDSLPKKLT
L
>CpB0128 HB7 protein
MVFSYYCMGLFFFSGAISSCGLLVSLGVGLGLSVLGVLLLLLAGLLLFKI
QSMLREVPKAPDLLDLEDASERLRVKASRSLASLPKEISQLESYIRSAAN
DLNTIKTWPHKDQRLVETVSRKLERLAAAQNYMISELCEISEILEEEEHH
LILAQESLEWIGKSLFSTFLDMESFLNLSHLSEVRPYLAVNDPRLLEITE
ESWEVVSHFINVTSAFKKAQILFKNNEHSRMKKKLESVQELLETFIYKSL
KRSYRELGCLSEKMRIIHDNPLFPWVQDQQKYAHAKNEFGEIARCLEEFE
KTFFWLDEECAISYMDCWDFLNESIQNKKSRVDRDYISTKKIALKDRART
YAKVLLEENPTTEGKIDLQDAQRAFERQSQEFYTLEHTETKVRLEALQQC
FSDLREATNVRQVRFTNSENANDLKESFEKIDKERVRYQKEQRLYWETID
RNEQELREEIGESLRLQNRRKGYRAGYDAGRLKGLLRQWKKNLRDVEAHL
EDATMDFEHEVSKSELCSVRARLEVLEEELMDMSPKVADIEELLSYEERC
ILPIRENLERAYLQYNKCSEILSKAKFFFPEDEQLLVSEANLREVGAQLK
QVQGKCQERAQKFAIFEKHIQEQKSLIKEQVRSFDLAGVGFLKSELLSIA
CNLYIKAVVKESIPVDVPCMQLYYSYYEDNEAVVRNRLLNMTERYQNFKR
SLNSIQFNGDVLLRDPVYQPEGHETRLKERELQETTLSCKKLKVAQDRLS
ELESGLSRR
>CpB0765 putative exodeoxyribonuclease V gamma
MNATKHCRASFSNSPRHLLAQLAEDITSTHQKPFTKRWILVANATTGHWI
KNQLVHVLSDHIFMGSTIFTASDSIVKHLFLGSGCSQPNIPDYLTLPLLI
NNILEEISKASKFENGREFLSPPTYETTKKLAAAFKQFHTFSQRPTKNAS
HYQELFQILESHFSSYEEMFTTILNNRTQEEDCSLHIFGYAHLPKHLAEF
FINLSTYFPVYFYCFSPCREYFGDLLSDRAIDFFWNQLPDSPIKNAWEHY
VLSDRQALLANLAHKSQSSQNFFLDREIDYQEMFLPSKHDSSLGVIQNSI
LDLKPTSPQDFSQTKQTICIYRALNIPREVQEVFCKVTELLHRGVSPEEI
FILSSHIESYKVHLNAIFNPHVPIYFTDEVDPRAEDLRNKILLLSSILQT
QGDLHYILQLLTHPQLQQPIDQNKVPYLIKKLSSEWGKISSKDRASGQQM
KALGDLILEEYPFHQEGGRVSQVEVWETTVPLIYFIQERINLYLSSSQHS
YEDLFQNVFSCLEKIFVLSPEETSFITTLRNSLFPTFATSSCSLLFFTDF
CLDFLLHFHKPSPLYDKPGPYIGSLSSLSLIPKGYVFILGANKTTSSDIF
DLLNRTTTHEELAFSSTEDEENFHFLQILVSTKHELHISYISSAAQFNLP
SPFLNHIKETLDLPVETLPTQPYLSAFFKNKACLHTSQEYNYSLAHAFYS
KKALLPSLFIPTVKQVNLPQHLSLNEIIKGIFSPLDLFLKTNYNLRISYP
EHLKKQQKLFPTKHQIEDFWNECFVDKEHDLIPSISPHAEELFTYYREKT
ILLRNGLDKDPKHSPYTVTFSSSIFEERPYHESYLFPPLSLSFQGNPVQI
HGTIHGVCNEGLYLCSIDPRDSLKKTTRTLGSLPETSSEQKQLLERYVAL
AVLQMSQHLSSDSALIKLTSFNTKENHHPPFSDPEGYLRKVLEVYHLMSS
QPIPLLSPLCWKTLDDEEKFHQAVLSAISEEAKNPSLPIFWQFHNRNIEE
ILNHVGASERLKILSLFRGPCEAV
>CpB0744 DNA topoisomerase IV subunit A
MRDVSELFRTHFMHYASYVILERAIPHILDGLKPVQRRLLWTLFLMDDGK
MHKVANIAGRTMALHPHGDAPIVEALVVLANKGYLIDTQGNFGNPLTGDP
HAAARYIEARLSPLARETLFNTDLIAFHDSYDGREKEPDILPAKLPVLLL
HGVDGIAVGMTTKIFPHNFAELLKAQIAILNDKKFTVFPDFPSGGLMDPS
EYQDGLGSITLRASIDIINDKTLVVKQICPQSTTETLIRSIENAAKRGTI
KIDTIQDFSTDVPHIEIKLPKGSRAKEMLPLLFEHTECQVILYSKPTVIY
ENKPVECSISEILKLHTTALQGYLEKELLLLQEQLTLDHYHKTLEYIFIK
HKLYDSVREVLAINKKISADDLHQAVLHALEPWLHELATPVTKQDTSQLA
SLTIKKILCFNEEACTKELLAIEKKQAAIQKDLGRIKEVTVKYLKGLLER
HGHLGERKTQITNFKTAKTSILKQQTLI
>CpB0432 integration host factor beta chain
MATMTKKKLISTISQDHKIHPNHVRTVIQNFLDKMTDALVKGDRLEFRDF
GVLQVVERKPKVGRNPKNAAVPIHIPARRAVKFTPGKRMKRLIETPNKHS
>CpB0347 DNA-directed DNA polymerase III beta chain
MKFVVSRNELGNLIKKIQSVVPQNTPIPVLTHVLIETYNDELVFTATDLT
VSTRCVTKAKVYEKGAISIPSKRFFQLVKELTEANLEISSSAGEMAQITS
GSSCFRLLSMEKEDFPMLPDIQNALRFSLPAEQLKTMLQRTSFAVSREES
RYVLTGVLLAIANGVATIVGTDGKRLAKIDAEVTLDKSFSGEYIIPIKAV
EEIIKMCSDEGEATIFLDQDKIAVECDNTLLITKLLSGEFPDFSPVISTE
SNVKLDLHREELITLLKQVALFTNESSHSVKFSFLPGELTLTANCTKVGE
GKVSMAVNYSGELLEIAFNPFFFLDILKHSKDELVSLGISDSYNPGIITD
SASGLFVIMPMRLHDD
>CpB0864 SNF protein
MVLEALAIFRQDAMQHLLKHRKEIVVDFCEDSYTIRIPDEEAPEGYWLST
LKLQDIDRLTFASCSCPDGECCLHLMTAYFAVYDALGLHPLHDKFRHSFW
YAVFSHFFLDSIPLQAQGEMVYTLESPHITLTIECLSEEVFQDWLRTIHA
SEEPTVFTNKTFLKSALYRTAKKFFFLNEEGAELTIGENSQGFPSHFSLQ
WQGLVFKAEILDFPTLEDIFPKLELAHTSLENVSHDISITNVTVCAEEAK
VNFTLSPVIHKKDRENHPKTRIGSVEYVAKTHEMITGPKAIALPIYAIPL
LADKFKDQLLSLLCYDSLEYRLRYDIRLLRDASFSFSAYLVTPGDLDNGS
LIYPNYCYSPTKGLMQVVGMLSPKQAFIVKSEQVEDFLNERGHLIQEPGF
QTFINERPEGHLTYNVTEQGVLLFHYDVGDPSSTEIRFGTWTYYTNQGFF
LEKKNDLPIQDGLIVEPQDIPAFIVKNDAALRRLPNFFSSPPNLKDLLIE
VHRQSRGKGLDLKPILVGLGESRCWLFGVFLYREDIGFSLIPTPLQGLCF
LPRVIPPENVPQFLTQYAQHERILFPNPQTRPPESYELVIQSIHRPHPAS
PLHLQLELKTNLGSVPIGIALQGLKSKHTFLFTQAGFLDLKQNLFQFLKQ
FLSTQKCVIAENTVIANITDVFKLDALAPLSVTDDTIANPEDLQFFSQLK
AACLPPIPQNLFSSDHQLRPYQNSGLLWMWFLYNHRLSGLLCDEMGLGKT
HQATALLDIVFQSSQPSARPKFLIVCPTSVLPHWEHILSNHLPGVSIFSF
HGPNKPSELPPADILLTSYGTLRQNYDKFYKIAFTIVVFDEIHMAKNKSS
QIHKILCRIDAQMKLGLTGTPIENNLLEFKGLLDIILPNYLPSDALFKKL
FTKRCSSEELEEIIPSQDLLLKLTRPFILRRTKKLVLPELPDKVESIIAC
SLSPDQEKLYMATLQREKSHIQKLETPEEPATNFLHIFALLNHLKQICDH
PAVFFKDPDQYKNYESGKWNAFVKLLKESLNAGYKVVVFSQYIHMIRIIT
LYLEEIGIKYASIQGKSLNRKEEIETFTTDPNCQVFVGSLLAAGTGINLT
AGNVVIMYDRWWNPAKENQALDRVHRIGQKNTVFIYKLITEDTLEERIHY
LIEKKIRLLDKVIASQDSNILHMLNREDLLTILSYKDEHGTSDSEESPVD
APVEDDTGVLPPEDS
>CpB1100 hypothetical protein
MKLYQTLRGIVLVSTGCIFLGMHGGYAAEVPVTSSGYENLLESKEQDPSG
LAIHDRILFKVDEENVVTALDVIHKLNLLFYNSYPHLIDSFPARSQYYTA
MWPVVLESVIDEFLMVADAKAKRIATDPTAVNQEIEEMFGRDLSPLYAHF
EMSPNDIFNVIDRTLTAQRVMGMMVRSKVMLKVTPGKIREYYRKLEEEAS
RKVIWKYRVLTIKANTESLASQIADKVRARLNEAKTWDKDRLTALVISQG
GQLVCSEEFSRENSELSQSHKQELDLIGYPKELCGLPKAHKSGYKLYMLL
DKTSGSIEPLDVMESKIKQHLFALEAESVEKQYKDRLRKRYGYDASMIAK
LLSEEAPPLFSLL
>CpB0800 UvrD
MTCISELNEAQRKAVTAPLNPVLVLAGAGAGKTRVVTYRILHLINQGIAP
REILAVTFTNKAARELKERIVNQCASTNEFDVPMVCTFHSLGVFILRRSI
NLLNRENNFTIYDQSDAEKLIKHALQQHNLKPNLASKIQAHVSQAKNRLL
FPEDLDPNDYIDPVVSIYQEYQKKLIEANALDFDDLLFLTVRLLRESPEA
QELYNQLWKALLIDEYQDTNHAQYTLMQLLSKQHRNVFAVGDPDQSIYSW
RGANIHNILNFENDYPNAKVLCLEENYRSYGNILNAANALIKNNASRLEK
ELRSVKGPGEKIRLFLGSTDREEADFVAAEILQLHRVGNIKLRDICIFYR
TNSQSRTFEDALLRRRIPYEIIGGLSFYKRKEIQDILAFLRIFISKSDIV
AFDRTVNLPKRGIGSTTIFALTQYAIAQGLPILKACQQALDTKDVKLSKK
QQEGLQEYLALFPQIEHAYNTLSLRDFIESVVRITGYLEILKEDADTFKD
RKSNLEELYHKALESEQQNPKTHLELFLDDLALKGSDDDLNLTADRVNLM
TLHNGKGLEFRVSFLVGLEEQLLPHANSLGGTYENIEEERRLCYVGITRA
QDLLYLTTAQVRSLWGTVRMMKPSRFLKEIPKDYMIQVR
>CpB0878 swf/snf helicase
MLNFRKLRRDFSANILQDGKKLFEQGAVIDAKILSMNGETVCISAQVRGL
YDNIYECEIEVDRSESDTVDSNCDCSYNYDCQHIVALLFYLEQYFNEMVV
AYARSADLETDHEINEEVKKELKETFVAAATKEEERKDREHQKEILREYV
HAANALSANPFFLPLEYLEKDSAELAVLFVSVNEDTFAPANQPIEFQLVL
RLPCRSKPFYISNIRTFLEGVLYQEPIVLNGRRFFFTMQSFNASDRKLID
LLIRYVRYPNHTTEEKLLKSAYLMPPALGVILAKMFEHQLADRGGGSLGE
KESFSGLFCGNLEEPLCWSLTPAKMKFNLDFFDMPYKALLMTPVILVDDD
EVQPEQTMLLESDAPGIIHHFVYHRFSPQIKRAHLRSFSRLRDIAIPEAL
FGSFRENALPVFQEYAEIANVHLLNSFVTLPYVDEVRAICDMSYLDGELE
AKLHFLYGSLRVPAASLALQYQDVRAFISDEGILARNLVEERKMLEEVFS
GFIYDERDGAFRVKSEKKIVEFMTETIPANQHRITFNCPENLSGQFIYDE
TIFELSFREGSDINYYEADLKVHGLLKGVPLDLLWDCISAKKRFLELPKA
GQQSKGTRRGKVNSGKLPCILVLDLEKIAPVVQIFNEIGFKVLDDLVQKC
PLWSLTGISLDQFEALPVNFSMSERLIEIQKQIRGEIEFDFQDVPQQIQA
TLRSYQTEGVHWLERLRKMHLNGILADDMGLGKTLQAIIAVTQSKLEKGS
GCSLIVCPTSLVYNWKEEFRKFNPEFRTLVIDGVPSQRRKQLTALADRDV
AITSYNLLQKDVELYKSFRFDYVVLDEAHHIKNRTTRNAKSVKMIQSDHR
LILTGTPIENSLEELWSLFDFLMPGLLSSYDRFVGKYIRTGNYMGNKADN
MVALKKKVSPFILRRMKEDVLKDLPPVSEILYHCHLTESQKELYQSYAAS
AKQELSRLVKQEGFERIHIHVLATLTRLKQICCHPAIFAKDAPEPGDSAK
YDMLMDLLSSLVDSGHKTVVFSQYTKMLGIIKKDLESRGIPFVYLDGSTK
NRLDLVNQFNEDPSLLVFLISLKAGGTGLNLVGADTVIHYDMWWNPAVEN
QATDRVHRIGQSRSVSSYKLVTLNTIEEKILTLQNRKKSLVKKVINSDDE
VVSKLTWEEVLELLQI
>CpB0358 hypothetical protein
MAVEQSHIKEEIEKLIGKAIKRVCGNKENDLCRYLPGPSGGYMHHFTLKK
MKSAAPEQLLKMLKTFILESETPRTINPKPRAPRGSKKRRDFINFTKTDI
ERVLELARQVGDKDLLARFSPKKPLTSLKRELIRSIRNGIVSVELWNAYV
EAVKAVSSPNLEVTSPFV
>CpB1098 pHB5 protein
MMLRVIELPLLPIKQALEKAFVQYNSYKAKLTKVEPCFRESPAYITSEER
LQSLDQTLERAYKEYQKRFQEPSRLESEVSGCREHLREQVKQFETQGLDL
IKEELIFVSDVLFRKMVSCLVSTVHVPFMEFYYEYFELHRLRLRAQWMAN
AEIYSKVRKAFPEMLKETLEKAKAPREEEYWLLCEERKSKEKRLILNKIE
AAQQRVKDLEPPPIKETGKQKRKKEYSFFIRLKS
>CpB0866 endonuclease III
MKQFILRTLNALFPNPKPSLEGWSSPFQLLIAILLSGNSTDKAVNSVTPQ
LFAKAPDAQSILDLPPGKLYQLIAPCGLGERKSAYIYQLSQILVRDFHGE
PPNDMALLTQLPGVGRKTASVFLGIAYGKPTFPVDTHILRLAQRWKISEK
KSPSAAEKDLARFFGHENTPKLHLQLIYYARQYCPALHHKIDNCPICSYL
AKEANSTRT
>CpB0730 serine/threonine-protein kinase
MDCRGGIPLPEPQVIGGYHVKKILSKKLRSRVVHGLHPETRHSTVIKVFS
PSPSFTSRSVYNFLKEAQSLHQITHPNIVKFHRYGKWQDCLYIAMEYIEG
ISLREYILAQFISLPQAIDIIFDIAQALEHLHSRNILHKDIKPENILITP
QGKIKLIDFGLADWDTEIQRAHPSVIGTPYYMSPEQRQGESHSPASDIYA
LGLLAYELILGHLSLGRVFLSLVPERISKILAKALQPSPNNRYSSTREFI
QDIHHYRMSGDMQEDLRIKDHTVALYEQLQTQRFWLAPETLRFPDFISGV
LYHQGYPLYPHAYDTLLEGDVFNLWLGYSPISNATIALSVVKSLVCQQDL
QRPLLDRVCEINECLIRMKIPIDEMGISILCLEISKENKELSWVACGKTV
FWIKRQGRVVQDFESFSPGLGKITSLQIRETKVAWEIGDEAVVCTLELEE
SVASLKTLSLAELQDRRQKAIFCPIESIHGGIQSRQHGSNSPSTLISLKR
IR
>CpB0096 excinuclease ABC chain A
MKSLPVYVSGIKVRNLKNVSIHFNSEEIVLLTGVSGSGKSSIAFDTLYAA
GRKRYISTLPTFFATTITTLPNPKVEEIHGLSPTIAIKQNHFSHYSHATV
GSTTELFSHLALLFTLEGQARDPKTKEVLDLYSKEKVLSTIMELSEGVQI
SILAPLLRKDIAAIHEYAQQGFTKVRCNGTIHPIYSFLTSGIPEDCSVDI
VIDTLIKSENNIARLKVSLFTALEFGEGHCSVLSDEELMTFSTKQQIDDV
TYTPLTQQLFSPHALESRCSLCQGSGIFISIDNPLLIDENLSIKENCCSF
AGNCSSYLYHTIYQALADALNFNLETPWKDLSPEIQNIFLRGKNNLVLPV
RLFDQTLGKKNLTYKVWRGVLNDIGDKVRYTTKPSRYLSKGMSAHSCSLC
KGTGLGDYASVATWEGKTFTEFQQMSLNNWHVFFSKVKSPSLSIQEILQG
LKQRLSFLIDLGLGYLTPNRALATLSGGEQERTAIAKHLGGELFGITYIL
DEPSIGLHPQDTEKLIGVIKKLRDQGNTVILVEHEERMISLADRIIDIGP
GAGIFGGEVLFNGKPEDFLMNSSSLTAKYLRQELTIPIPESREAPTSWLL
LTEATIHNLKNLSIRLPLARLIGVTGVSGSGKSSLINNTLVPAIESFLKQ
ENPKNLHFEWGCIGRLIHITRDLPGRSQRSIPLTYIKAFDDIRELFASQP
RSLRQGLTKAHFSFNQPQGACIQCQGLGTMTISDDDTPIPCSECQGKRYH
SEVLEILYEGKNIADILDMTAYEAEKFFISHPKIHEKIHALCSLRLDYLP
LGRPLSTLSGGEIQRLKLAHELLFASPKQTLYVLDEPTTGLHTHDIQALI
EVLLSLTYLGHTVLVIEHNMHVVKVCDYVLELGPEGGDLGGYLLASCTPK
DLIQLNTPTAKALAPYIEGSLDIPVVKSEPPSSPKSCDILIKDAYQNNLK
HIDLALPRNSLIAIAGPGASGKHSLVFDILYASGNIAYAELFPPYIRQGL
LKETPLPSVGEVKGLSPVISVRKCSSSNRSYHTIASALGLSNGLEKLFAI
LGEPFSPLTEEKLSKTTPQTIIDSLLKSYKDDYVTITSPIPLGSDLEIFL
QEKQKEGFIKLYSEGNLYDLDERLPLNLIEPAIVIQHTKVSPKNSSSLLS
AISVAFSLSSEIWIYISQKKQRKLSYSLGWKDKKGRLYPEITHQLLSSDH
PEGRCLTCGGRGEILKISLEEHKEKIAHYTPLEFFSLFFPKSYMKPVQKL
LKDENASQPLKLLTTKEFLNFCRGSSEFPGMNALLMEQLDTESDSPLIKP
LLALTSCPACKGSGLNDYANYVRINNTSLLDIYQEDATFLESFLNTIGTD
DTRSIIQDLMNRLTFISKVGLSYITLGQRQDTLSDGENYRLHLAKKISIN
LTNIVYLFEEPLSGLHPQDLPTIVQLLKELVANNNTVIATDRSCSLIPHA
DHAIFLGPGSGPQGGFLMDSDTEVCPSVDLHANVPQTEVCPKAPLSISKA
NHTRGSDRTLKVNLSIHHIQNLKVSAPLHALVAIGGVSGSGKTSLLLEGF
KKQAELLIAKGTTTFSDLVVIDSHPIASSQRSDISTYFDIAPSLRAFYAS
LTQAKALNISSTMFSTNTKQGQCSDCQGLGYQWIDRAFYALEKRPCPTCS
GFRIQPLAQEVLYEGKHFGELLHTPIETVALRFPFIKKIQKPLKALLDIG
LGYLPIGQKLSSLSVSEKTALKTAYFLYQTPETPTLFLIDELFSSLDPIK
KQHLPEKLRSLINSGHSVIYIDHDVKLLKSADYLIEIGPGSGKQGGKLLF
SGSPKDIYASKDSLLKKYICNEELDS
>CpB0150 DNA ligase (NAD+)
MKEENSQAHYLALCRELEDHDYSYYVLHRPRISDYEYDMKLRKLLEIERS
HPEWKVLWSPSTRLGDRPSGTFSVVSHKEPMLSIANSYSKEELSEFFSRV
EKSLGTSPRYTVELKIDGIAVAIRYEDRVLVQALSRGNGKQGEDITSNIR
TIRSLPLRLPEDAPEFIEVRGEVFFSYSTFQIINEKQQQLEKTIFANPRN
AAGGTLKLLSPQEVAKRKLEISIYNLIAPGDNDSHYENLQRCLEWGFPVS
GKPRLCSTPEEVISVLKTIETERASLPMEIDGAVIKVDSLASQRVLGATG
KHYRWALAYKYAPEEAETLLEDILVQVGRTGVLTPVAKLTPVLLSGSLVS
RASLYNEDEIHRKDIRIGDTVCVAKGGEVIPKVVRVCREKRPEGSEVWNM
PEFCPVCHSHVVREEDRVSVRCVNPECVAGAIEKIRFFVGRGALNIDHLG
VKVITKLFELGLVHTCADLFQLTTEDLMQIPGIRERSARNILESIEQAKH
VDLDRFLVALGIPLIGIGVATVLAGHFETLDRVISATFEELLSLEGIGEK
VAHAIAEYFSDSTHLNEIKKMQDLGVCISPYHKSGSTCFGKAFVITGTLE
GMSRLDAETAIRNCGGKVGSSVSKQTDYVVMGNNPGSKLEKARKLGVSIL
DQEAFTNLIHLE
>CpB0949 diadenosine tetraphosphatase
MMKTKYEYSFGVIPIKFFGTPDKNTLKACFICHTRGKHWGFPKGHSEDKE
GPQEAAERELVEETGLSVVNFFPKVLIEQYSFNNEEQVFVRKEVTYFLAE
VRGDIHADPMEICDSQWLSLQEGLRLLSFPELRDLTVEADKFINNYLFSS
>CpB0733 hypothetical protein
MAKYPLEPVLAIKKDRVDRAEKVVKEKRRLLEIEQEKLREKEAERDKVKN
HYMQKIQQLRDLLDEGTTSDAVLQIKSYIKVVAVQLSEEEEKVNKQKEVV
LAASKELEKAEVNLAKRRKEEEKTRLHKEEWMKEALKEEARAEEKEQDEM
GQLLFQLRQKKKRESGGS
>CpB0801 uracil DNA glycosylase
MQNATIDQLPVSWQEQLPLCWREQLKEEWSKPYMQQLLIFLKQEYKEHTV
YPEENCVFSALRSTPFDQVRVVILGQDPYPGKGQAHGLSFSVPEGQRLPP
SLINIFRELKTDLGIENHKGCLQSWANQGILLLNTVLTVRAGEPFSHAGK
GWELFTDAIVTKLIQERTHIIFVLWGAAARKKCELLFNSKHQHAVLSSPH
PSPLAAHRGFFGCSHFSKINYLLNKLNKPMINWKLP
>CpB1097 Hb4
MLFLISGALFLTLGISGLSAAISFGLGIGLSALGGVLVVSGLLCLLAKRE
VPTVRPEEIPEGVSVAPSEEPALQATQKTLAQLPKELDQLDRYIQEVVSC
LGKLKDLRCEDQGLLKDAKEKLQVFDFVWKDMMTEFVELQQIMDQEGWYL
KCLIQEMRDIGSTLFMSQVSLFKLWEWLGYLPSGDVRGERLKKSAREVVD
RFMRRICDTRKVAMTFDRNAYGVAKTAFEKAFGALETCVYKSMTESYREA
FCEYKKTKILRDEEKILRICYLELRR
>CpB0219 mammalian coiled coil synaptonemal complex protein
MSSAIARDCFPSPSPQPSSTLGVHPPKYKSLILSVSLIVLGVLLLCVGML
LLVNAIFSFSVLTVGLGGAGVFLGSLLLILGLIFFVSYHRKLSEATRSLE
QKITLEYQPWADLRKELNEVQEWSNFLLDEWEDFKEVVAQHKSQFATFEG
DLLLFGREVEKYETIWKELDGRDVALLTELKNIWGPLEFLRKKGDRLQCE
IDKLRKEVMKVGKSGLKLACELTKFKSALKDVKIEQECYRDKRKVEKLEV
FPEGYRRELLEVLKTRLSVEKEIQLFEEVVSAFEEKLASLHRTVFSEEEL
QEALDKAKAELLDIQVRKSVVEDLSCEPTLIQYHLLRLYEVQCRIVEQFL
TQTFSSEQEKVLEEYEALKARIRKTLRVKLDQVRANVAFVASTTDLLSES
ESLDGNDSVFEDAHDDFLD
>CpB0395 hypothetical protein
MTLPMQKSLTSFDDFSQAYAEKVPAIALIGSALEDDKDALIELLVSESFK
ELGGQGLMPATLMSWTETFALFQEHETLGIIHAEKFPLATKEFLSRYARN
PQPHLTILIFTTKQECFRELSKALPSALSLSLFGEWPADRQKRIIRLLLQ
RAERVGISCSQSLASLFLRALASTSLPDILSEFDKLLCSVGKKTSLDHSD
IKELVVKKEKASLWKFRDSLLKRDPVEGHQQLHFLLEDGEDPLGIITFLR
TQCLYGLRSIEEGSKENKHRMFVLYGKERLHQALNSLFYAETLIKNNVQD
PIVAVETLVIRMVNL
>CpB0977 DNA primase
MYTEESLDNLRHSIDIVDVLSEHIHLKRSGATYKACCPFHTEKTPSFIVN
PAGAHYHCFGCGAHGDAIGFLMQHLGYSFTEAILVLSKKFQVDLVLQPKD
SGYTPPQGLKEELRHINSEAETFFRYCLYHLPEARHALQYLYHRGFSPDT
IDRFHLGYGPEQSLFLQAMEERKISQEQLHTAGFFGNKWFLFARRIIFPV
HDALGHTIGFSARKFLENSQGGKYVNTPETPIFKKSRILFGLNFSRRRIA
KEKKVILVEGQADCLQMIDSGFNCTVAAQGTAFTEEHVKELSKLGVLKVF
LLFDSDEAGNKAALRVGDLCQTAQMSVFVCKLPQGHDPDSFLMQRGSSGL
IALLEQSQDYLTFLISEKMSSYPKFGPREKALLVEEAIRQIKHWGSPILV
YEHLKQLASLMMVPEDMVLSLANPQVTAEPQNIPIKQKVPKIHPHIVMET
DILRCMLFCGSNTKILYTAQFYFVPEDFKHPECRKLFAFMISYYEKYRKN
VPFDEACQVLSDSQILQLLTKRRLNTEALDTIFVQSLQKMADRRWREQCK
PLSLNQNIQDKKLEILEDYVQLRKDRTIITLLDPESELIP
>CpB0613 hypothetical protein
MQICVTGVVLRSRPLGKNHTLTTLFTPEGLFTFFAKQGQTLQCDYRETLV
PISLGKYTLHRNGSRLPKLTHGDILNAFEAIKQTYALLEASGKMIQALLA
SQWKEKPSHKLFSLFLNFLHRIPESSNPEFFAAIFVLKLLQYEGILDLTP
ACSLCKASLPYACYRYQGHKLCKKHQHKQAISIEKEEEQILQAIIHAKQF
SELLAIAEFPIAIAEKIFYLFDSLQEEKKSERNSSEDPYHEILRLSKVVH
PY
>CpB0692 DNA-directed DNA polymerase III alpha chain
MTWIPLHCHSQYSVLDAMSSIKDFVAKGQEFGIPALALTDHGNLYGAVDF
YKECTQKGIQPIIGCECYIAPGSRFDKKKEKRSRAAHHLILLCKNEQGYR
NLCILTSLAFTEGFYYFPRIDKDLLRQYSEGLICLSGCLSSSVSDAALKS
PEALLLELQWFQDLFKDDYFTEVQLHKMSEESIAGFKEEWLKQEYYSLIE
KQIKVNTAVLEASKRLGIPTVATNDIHYINANDWQAHEILLNVQSGETVR
IAKQNTHIPNPKRKVYRSREYYFKSPAQMAELFKDIPEVISNTLEVAKRC
DFTFDFSKKHYPIYVPESLKTLNSYTEEDRYQASAVFLKQLAEEALPKKY
SSEVLAHIAKKFPHRDPIDIVKERMDMEMAIIIPKGMCDYLLIVWDIIHW
AKANGIPVGPGRGSGAGSVLLFLLGITEIEPIRFDLFFERFINPERLSYP
DIDIDICMAGRERVINYAIERHGKDNVAQIITFGTMKAKMAVKDVGRTLD
MALSKVNHIAKHIPDLNTTLSKALETDPDLHQLYINDAESAQVIDMALCL
EGSIRNTGVHAAGVIICGDQLTNHIPICISKDSTMITTQYSMKPVESVGM
LKVDLLGLKTLTSINIAMSAIEKKTGQSLAMATLPLDDATTFSLLHQGKT
MGIFQMESKGMQELAKNLRPDLFEEIIAMGALYRPGPMDMIPSFINRKHG
KEIIEYDHPLMESILKETYGIMVYQEQVMQIAGALASYSLGEGDVLRRAM
GKKDFQQMEQEREKFCKRACNNGIDPELATVIFDKMEKFAAYGFNKSHAA
AYGLITYTTAYLKANYPKEWLAALLTCDSDDIEKIGKLIREAQSMGIPIL
PPHINVSSNHFVATDEGIRFAMGAIKGIGRGLIESIVEERDHHGPYESIR
DFIQRSDLKKVSKKSIESLIDAGCFDCFDSNRDLLLASVEPLYEAIAKDK
KEAASGVMTFFTLGAMDRKNEVPICLPKDIPTRSKKELLKKEKELLGIYL
TEHPMDTVRDHLSRLSVVLAGEFENLPHGSVVRTVFIIDKVTTKISSKAQ
KKFAVLRVSDGIDSYELPIWPDMYEEQQELLEEDRLIYAILVLDKRSDSL
RISCRWMKDLSIVNENIIYECDQAFDRIKNQVQKMSFTMSTSGKETKAKG
NKPNENGHTQALAPVTLSLDLNELRHSHLCILKKIVQKHPGSRTLVLVFT
QDNERVASMSPDDAYFVCEDIEELRQELVTADLPVRVITV
>CpB0440 replication initiation protein dnaA
MLTCNECTTWEQFLNYVKTRCSKTAFENWISPIQVLEETQEKIRLEVPNI
FVQNYLLDNYKRDLCSFVPLDVHGEPALEFVVAEHKKPSAPVASQKESNE
GISEVFEETKDFELKLNLSYRFDNFIEGPSNQFVKSAAVGIAGKPGRSYN
PLFIHGGVGLGKTHLLHAVGHYVREHHKNLRIHCITTEAFINDLVYHLKS
KSVDKMKNFYRSLDLLLVDDIQFLQNRQNFEEEFCNTFETLINLSKQIVI
TSDKPPSQLKLSERIIARMEWGLVAHVGIPDLETRVAILQHKAEQKGLLI
PNEMAFYIADHIYGNVRQLEGAINKLTAYCRLFGKSLTETTVRETLKELF
RSPTKQKISVETILKSVATVFQVKLNDLKGNSRSKDLVLARQIAMYLAKT
LITDSLVAIGAAFGKTHSTVLYACKTIEHKLQNDETLKRQVNLCKNHIVG
>CpB0124 exodeoxyribonuclease V 67K chain
MEKICGYLEQILVENKDSGDITAYIKIPNKTTPILIKGKLPQPLELGSPI
QIYGVWSHSPSNTKYFQIHSYDSPLLYEYRGVFHYLTSKLIKGIGPKIAE
KIIEKFQEKTCYVLDITPERLSEVSGISETRCVSICKQLCEQKILRKTLL
FLQEYNIPIHYGVRIFKKYQEKSIEKICEDPFLLAREMEGIGFKTADFIA
MKLGVPRNSESRLCAGIQHSLEELQEEGHTCYPIELLIDVVAKLLNQDVF
DTPITLEEIDTQILNMQKRKLLHIQDISGTLHVWTRYLHLAEKTIVSDLK
RILFSSRRIRSIDGEKAIAWVEENLSIDLAEQQREAIKACFSEKLLIITG
GPGTGKSTITQAILKIFEQVTHKIILAAPTGKAAKRMTEITQKHSVTIHA
LLQYDFKTKSFRKNHDNPIDCDLIIVDESGMMDTHLLHHFLKALPDYTTL
VFIGDIHQLPSVGPGNILKDLITSNKMTVIRLNKIFRQVHDSGIVTNAHR
VNEGELPILYSETGRRDFLFFQKDDQEEALNHIIHLVTKFVPQKYHIYPQ
DIQVLAPMKKGTLGIYNLNKALKHALNPKKANLHGRFQSYAVGDKVMQIR
NNYNKEVFNGDIGYVSTINFEDKAVVVRMEGKHVGYSFSELDDLVLAYAT
SVHKYQGSESPCIIIPIHTSHFMMLYRNLLYTAITRGKKLVILVGTKKAI
AIATRNNRVQHRCTGLAEVLKELDTKKNYADL
>CpB0767 exodeoxyribonuclease V 135K chain
MKPFNIFDSNSSIQGKFFLEASAGTGKTFTIEQIVLRALIEGSLTHVEHA
LAITFTNASTNELKVRIKDNLAQTLRELKAVLNSQPASLPTYLDINCNVK
QIYMQVRNALATLDQMSLFTIHGFCNFVLEQYFPKTRLIHKNPALTHSQL
VLHHITNYLKQDLWKNVLFQEQFHLLAVRYNVTSKHTSSLVDKLLASYTQ
PISSYFSSRVERLEQISLWHQQIYNSLLEIPKQVFLDQLTAHISGFKKQP
FSILDDLHHFVDLLYTSETHSSLFSFFKIAETFNFKHRLARYKPCAAFTV
LENMSWVERTLEFCNLDRIFNTLLVDLQEYLKQNYTPWLSPDESVFALEK
LLSSSEAQPVVQALREQYQLVLIDEFQDTDKQQWSIFSNLFISPKFTGSL
FLIGDPKQSIYEWRSADLPTYLTAKSSFSEDKQLQLVNNYRSTPKLMEAI
NQIFGKISPFLEIPGYLPIEYHALNPQSSETFENPPHAPIHFFFYETIKD
QALWIFSEALRLQKEQKIPLGNMVVLVSDSNQAFELISYATIPVSFSKNK
SIFHLTETHILTTALLEAILHPENYEKISKILFSSLFGLSLDEVTTKKED
FTIYFQSLHSYISHHGLLATFYRVMTTQGNVLFSSPRGDLIFQEMEKLCG
YLDTISSYPYHQLLHLKNFSETGRWEEELAISSYSEDLETLKITTIHSSK
GLEYDIVFCPGIEKSKKNKSSSELLREMYVACTRAKKQLYLPISTQPPSL
QRSSALTNYVKLEGTQSSAYDLAIHLHQEHPDLFSYSLPKDHGHATTVLN
LPLLETFALKVTPPKTIFSFSSTKFLLDTHKDSQSIPYSKLPISKQQLPL
GEKTGILIHKILESIQFSLLQDTEYLMSTIMRFIKHTHLEGFEETILKLL
SKTFFSPLTFSSQTFSLSQVLPNKIFRETSFLFLENQELWQGVIDLFFEH
EGKYYIIDWKTSFLGETNSDYSKSNLSIYIKQEKLDYQGRIYVKAVRKFL
NQFEIDDDVELGVIFIRGIDTQGNGFFALNSSEDIPNFNPKAIQKCQAYH
>CpB0044 DNA polymerase III (gamma and tau subunits) dnaX
MTLQPYQASSRKYRPQIFREILGQSSVVAVLKNALVFNRAAHAYLFSGIR
GTGKTTLARILAKALNCVHLSEDGEPCNQCFSCKEIASGSSLDVLEIDGA
SHRGIEDIRQINETVLFTPVKAKFKIYIIDEVHMLTKEAFNALLKTLEEP
PQHVKFFFATTEIHKIPGTILSRCQKMHLQRIPEKTILEKLSLMAQDDHI
EASQEALAPIARAAQGSLRDAESLYDYVISLFPKSLSPDTVAQALGFASQ
DSLRTLDNAILQRDYATALGIVTDFLNSGVAPVTFLHDLTLFYRNLLLTN
STTSKFSSQYKTEQLLEIIDFLGESAKHLQNTIFEQTFLETVIIHIIRIY
QRPVLSELISSIKSRQFEGLRNIKEPTLTQQVSAPQPQPTYKEQSFLEKK
NQPAAEGKIISVEVKSSASIKSAAVDTLLQFAVVEFSGILRQ
>CpB0526 N-methylpurine-DNA glycosylase
MLQEHFFLSEDVITLAQQLLGHKLITTHEGLITSGYIVETEAYRGPDDKA
CHAYNYRKTQRNRAMYLKGGSAYLYRCYGMHHLLNVVTGPEDIPHAVLIR
AILPDQGKELMIQRRQWRDKPPHLLTNGPGKVCQALGISLENNRQRLNTP
ALYISKEKISGTLTATARIGIDYAQEYRDVPWRFLLSPEDSGKVLS
>CpB1105 exodeoxyribonuclease VII large chain
MSSPPQAVASLTERIKTLLESNFCQIIVKGELSNVSLQPSGHLYFGIKDS
QAFLNGAFFHFKSKYYDRKPKDGDAVIIHGKLAVYAPRGQYQIVAHALVY
AGEGDLLQKFEETKRRLTAEGYFATEKKKPLPFAPQCIGVITSPTGAVIQ
DILRVLSRRARNYKILVYPVTVQGNSAAHEISKAIEVMNAENLADVLIIA
RGGGSIEDLWAFNEEILVKAIHASTIPIVSAVGHETDYTLCDFASDVRAP
TPSAAAEIVCKSSEEQVQVFEGYLRHLLSHSRQLLTSKKQQLLPWRRFLD
RAEFYTTAQQQLDSIEIAIQKGVQGKIHESKQRYDNISRWLQGDLVSRMT
CRLQSLKKMLSQALSHKALSLQVRCHQLKKSLTYPRQIQQASQKLSPWRQ
QLDTLISRRLHYQKEEYFHKHTRLKHAHNVLEQQLRSHVQKLELLGRRLS
RGCELNLQNQKIAYANVKETLATILERRYENSVARYSALKEQLHSLNPKN
VLKRGYAMLFDFNENSAMISVDSLQENARVRIQLQDGEAILTVTNIEICK
LIKG
>CpB1033 hypothetical protein
MKRSRRNFEQALENLEKLKEISLATSNDSYLNNPARFNQRKQTGSSVMEM
KEALKNVENYLLEISCVSKSHADKALKESDFLIAGVQNVFSFLENQEDLY
KSLLDEYSEVTKAYDEVKKNLKEVPTYDLSTDEETEEHKEPECFLNNLVE
VKRDRSYELFYMLDEQDKRFYNDALVQIIYKQNKLHETVNEGDPLTKTLL
WNSEEVKNIASSLVIVNDMPLRLFYQRALSHLDIEAVVKVHNAVMALFFS
RYEATMVFKSPKKHNIWYFNDFLLFLREAWKDLNNNVIDSQERKQTKLLA
SALSLGIFESKLVFEEASRYLYFNIQTKLENANGKKPLSPGQYLTDAYEE
LHRLISKYPNGPLFKAMDRVLEHESRPYDPMILGILPSLEGTLKLHGKSI
DIIRSPSPVTQSSILYANCNEEFLGFLNAKAHRSEVTLVLNIQNRISRKE
RARSRVIEEALEQEEHAPYVHAFSFPEPEELLQNLESIHGDIETFADFFS
ILQEEFHKPLLASSFFLTKELKEFVGSFLKEKLTALKDIFFAKKKILFRN
DKLLLLHLLSYLIVFKLIERTNPNSIVVVSKDGLDYVSVFIAGFAFFSRE
AFWDEHSLKLLLTNVLSPTLVARDRLVFVSHIELLSKFVNCLKKNRQGFS
SLKSFFKDDIEGWEFTGYLHELTEVSHKHNL
>CpB0760 endonuclease IV
MKVLPPPSIPLLGAHTSTAGGLKNAIYEGRDIGASTVQIFTANQRQWQRR
ALKEEVIEDFKAALKETDLSYIMSHAGYLINPGAPDPVILEKSRIGIYQE
ILDCITLGISFVNFHPGAALKSSKEDCMNKIVSSFSQSAPLFDSSPPLVV
LLETTAGQGTLIGSNFEELGYLVQNLKNQIPIGVCVDTCHIFAAGYDITS
PQGWEDVLNEFDEYVGLSYLRAFHLNDSMFPLGANKDRHAPLGEGYIGKE
SFKFLMTDERTRKIPKYLETPGGPENWQKEIGELLKFSKNRDS
>CpB0120 ribonuclease H II
MNTSISEIQRFLSMIAFEKELVSEDFSVVAGIDEAGRGPLAGPVVASACI
LPKGKVFPGVNDSKKLSPKQRAQVRDALMQDPEVCFGIGVISVERIDQVN
ILEATKEAMLQAISSLPISPDILLVDGLYLPHDIPCKKIIQGDAKSASIA
AASILAKEHRDDLMLQLHRLYPEYGFDRHKGYGTSLHVEAIRRYGPSPCH
RKSFSPIKQMCAIV
>CpB0636 DNA-directed DNA polymerase I
MKKLFVLDASGFIFRAYFALPEMKNHQGQATQAVFGFIRSLNKLIKEFSP
EYMISVFDGPNNKQSRQAIYADYKSNRQKKFEDIPPQIALVKEYCSLIGL
AYLEKESVEADDVIASIAKKAREENYKVYVCTADKDLLQLVNDHVVAWNP
WADQGVVGISEVIERYGIPPGNIPDYLALVGDSSDNIPGLPGCGPKKAAA
LLKQFGSVEGLLENLDAVKGLSQTMLSERQETLKLSKRLALLDSNIPIPV
PIESLTFPQHPVDEEKLIHFYIQQGFKTLVPSKQTEAATVDVQIIKDAES
LTNILNLVQGGDIAFAVAYTGNHLLSLKLEGLALTQGSGVFFIALEEEGT
KILPILKDFFLREDLTFYGYNLKRDCHALLNAGIVIREISYDLALAEHLT
NGGGKISFQSLLVNHGFTETAHRFAKEWGNSGLPIGRLPEQPEQYFGEFV
AYLPIIKDAILEEINRKNLNHILSDIEMPLEKVLFSMERAGVPLDVEELA
ILEALFETELAVLTEEIYDLSGGPFNIKSPKQLSDILYNELGLRPIDKAK
STRAEVLEALRSEHPIIEKLLAFRTIEKLLSTYVKALPKQVDSHTQRIHP
SFDQTGAVTGRLACRDPNLQNIPIRSERGILLRKAFRLSEKNSYFLSADY
SQIELRFLAHLSQDKSLKFAFESGEDIHAFTASQVFHVPLEQVSKEQRMQ
AKTVNFGIVYGQQAFGLAKVLKISIGEAQELIQAYFSRYPEIAHFVEETI
QQAAKDLRVTTMLGRERIIDSWNEFPGSRAASGRFAVNTRIQGSAAELIK
LAMLDISQAIKQQQMKSRMLLQIHDELLFEVPEEEIEEMQRLVREKMESA
MTLSVPIVVNILIGKNWAEC
>CpB0010 HB3 protein
MWLDRYADKFILREKEEKMERHELFHATMVRKASGHAYAKAKAAFEKERS
NENQRKVKDVEKWLSKGLAEFRNQESRRARERLRELQTLYPEVSVEERVL
ERQRTKKVNLENLYADIEKKYHHCVREQEHYWKEVENKEAEYRENGEKVL
SAEEVSECLQRLEDCLETWSKKLTKAEESVFEMKFDATEKLGNKVLSDVT
NRLEILCEDAEEMIFRIEEIEMTLRMVELPLLFMKNTFEKASLQYNSCKE
MLAKVEPQCKESPTYRSSQERLERLNQDLQTAYTNCQERLQGFSDLESKV
RTCRDHLREQMKHFEVQGLNFINEELLWVGAELFTQARLDLVATVPYMEF
YLQYHNIKREKVRSQWMAKTERYREIRQAFQGVMKEDLLAEDTILKEEDY
WLLRDDWLLRDERKNRQRRLICNKIAAAQQRVKGF
>CpB1112 ribonuclease HII
MPPPFVVTLTTSAQNNLRDQLKEKNFIFSQPQNTVFQARSNTVTCTLYPS
GKLVIQGKGSEEFIEFFLEPEILHTFTHARVEQDLRPRLGVDESGKGDFF
GPLCIAAVYASNAEILKKLYENKVQDSKNLKDTKIASLARIIRSLCVCDV
IILYPEKYNELYGKFQNLNTLLAWAHATVINNLAPKPAGDVFAISDQFAA
SEYTLLKALQKKETDITLIQKPRAEQDVVVAAASILARDAFVQSIQKLEE
QYQVQLPKGAGFNVKAAGREIAKQRGKELLAKISKTHFKTFDEICSGK
>CpB0681 DNA polymerase III
MSLLKDTVFTCLDCEMTGLDVKKDRIIEIAAVRFTFDSVISSIEFLINPE
RVVSAESQRVHHISNAMLRDQPKIAEVFPQIKAFFKEGDYIVGHSVGFDL
QVLAQEMERIGETFLSKYTIIDTLRLAKEYGDSPNNSLESLAVHFNVPYD
GNHRAMKDVEININIFKHLCKRFRTLEQLKQVLAKPIKMKYMPLGKHKGR
CFSEIPLAYLQWASKMDFDSDLLFSIRHEIKHRQKGTGFSQVNNPFMEL
>CpB1104 exodeoxyribonuclease VII small chain
MEEVPFENAMQRLEEIVDLMNQPTTSLDASLALYEEADALMRICESRIRQ
VEQRVRELAEKRHESSLFEEQAVVR
>CpB0398 putative ssDNA binding protein
MMFGHFAGYLGADPEERMTSKGKRVITLRLGVKTRVGMKDETVWCKCNIW
HNRYDKMLPYLKKGSGVIVAGDISVESYMSKDGSPQSSLVISVDSLKFSP
FGRNEGSRSPSLEDNHQQVGYESVSVGFEGEALDAEAIKDKDMYAGYGQE
QQYVCEDVPF
>CpB0415 A/G-specific adenine glycosylase
MTKIAFSEKAKNFPVEALKKWFEKNKRSLPWRDNPTPYSVWVSEVMLQQT
RAEVVIDYFNQWMERFPTIESLAAAKEEDVIKLWEGLGYYSRARHLLEGA
RMVMEEFHGKIPDDAISLAQIRGVGPYTVHAILAFAFKRRAAAVDGNVLR
VLSRIFLIETSIDLESTRTWVSRIAQALLPHKSPEVIAEALIELGACICK
KVPQCHRCPVRQACGAWRENKQFVLPVRHARKKVIFLHRLVAIVLYDGSL
VVEKRRPKEMMAGLYEFPYIEVEPEEGLQDIEGFTKKMELSLESPLEFLG
NLKEQRHAFTNHKVHLCPIIFKATSLPQFGELHLLSDIDHLAFSSGHKKI
KDALLIYLGDVRSRESIGV
>CpB0426 DNA-directed DNA polymerase III alpha chain
MDVLIFYDTETTGTQIERDRIIEIAAYNSVTDESFLTYVNPEIPIPDEAS
KIHGITTDAVLSAPKFPEAYEGFRKFCGEDSILVAHNNDGFDFPLLGKEC
RRHSLEPLTNRTIDSLKWAQKYRPDLPKHNLQYLRQVYGFAENQAHRALD
DVVILHKVFTSLIGDLPPQQVLDLLQQSYHPKVFKMPFGKYKGQPLVDIP
KSYFEWLENQGALDKPENKDIKAAIALLHQPT
>CpB0045 HB2 protein
MLLLISGALFLTLGIPGLTAGVSFGLGIGLSALGGVLVVSGLLCLLVKRE
VSKVCPEEIPAVQPEETPEGVPVTPFEKPALDEAQKEQKTQKILDQLPQE
LDQLDRYIQEVFACLGPLKDLKYEDQGFLQDVKEEFQVFDFVQKDMIAEF
VELQQILCQEGRLLEFVINQTRYIGRDLFKREDSLYKLWEWLGYLPSGDV
RGERLKKSAREVVDRFMRTTCNIRKIAMTFDRHVYSVAKTAFEKAFGALE
TCVYESMRESYREAFCEYEKAKLLGDEEKSAHAEQRFQDIKNRWEDVKDA
FFWVKEDGKIEIDDAIGNSCKWSERYEEHRITRARWYKVAEHQLFNATMR
VKDSLREHNEARVAFEKERSKENQRQVQKKKEKRLRDLKELHDQELPRAQ
ERLRELQALYPEIAVSVVEARREVASDLEKAHESIDKHYQSCVREQELY
>CpB0974 exinuclease ABC subunit C
MRIEDFSLKLIPSSPGVYLMKDVHDQVLYIGKAKNLKNRLASYFHEKGDS
RERIPFLMKKTASIETIVVSNETEALLLENNLIKQHHPKYNVLLKDDKTF
FCLAISLSHSWPKVEAIRTKAITSSQRQLIFGPYVSAEACHTLLEVISQW
FPLRTCSDREFALRKRPCILYDMKRCLAPCVGYCTPEEYQGTLDKAILFL
KGKIEEVVKDLEKVIQKASDNLEFEQAANYYRTLSLIKQAMAKQQVEKFH
FQNIDALGLYRHKQRTILTLLTVRSGKLLGARHFSFFENAQEDQDLLSSF
ILQYYVSQPYIPKEILTPLPLEFPTLSYVLNAESPPRLRSPKTGYGKELL
DLAYRNAKAYAATTLPSSTLPYQDFQNILRMSQYPYRIECYDNAHMQGAH
ATGVYIVFENNGFDPKQYRTFSIDSEKTQNDLALLEEVLLRRFHSLTTAL
PDMIVVDGGKTHYNKTKKIIQTLNLTGIQVVTIAKEKSNHSRGLNKEKIF
CETFPEGFSLPPTSNLLQFFQILRDEAHRFAISKHRKKRGKALFEQEKIP
GIGEVKRKRLLQKFKSWKQVMLSSQEELEAIPGLTKKDIAVLLARQKDFN
KSD
>CpB0317 dnaA, replication initiation protein
MRAWEEFLLLQEKEIGTNTVDKWLRSLKVLCFDACNLYLEAQDSFQITWF
EEHIRHKVKSGLVNNNNKPIRVHVTSVDKAAPFYKEKQMQQEKTAYFTMH
YGSVNPEMTFSNFLVTPENDLPFRVLQEFTKSPDENGGVTFNPIYLFGPE
GSGKTHLMQSAISVLRESGGKILYVSSDLFTEHLVSAIRSGEMQKFRSFY
RNIDALFIEDIEVFSGKSATQEEFFHTFNSLHSEGKLIVVSSSYAPVDLV
AVEDRLISRFEWGVAIPIHPLVQEGLRSFLMRQVERLSIRIQETALDFLI
YALSSNVKTLLHALNLLAKRVMYKKLSHQLLYEDDVKTLLKDVLEAAGSV
RLTPLKIIRNVAQYYGVSQESILGRSQSREYVLPRQVAMYFCRQKLSLSY
VRIGDVFSRDHSTVISSIRLIEQKIEENSHDIHMAIQDISKNLNSLHKSL
EFFPSEEMII
>CpB0641 dnaB, replicative DNA helicase
MDKSTGVPLPSPPHSKESEMIVLGCMLTGVHYLNLAANQLYEEDFYYLEH
KIIFRVLQDAFKQDKPIDVHLAGEELKRHNQITVIGGPSYLITLAEFAGT
AAYLEEYVDIIRSKSILRKMISTAKEIEKRALEQPKNVAEALDEAQNSFF
KISQSTSVSQYTLVADKLRGLTTTTDKPYLVQLQERQELFLQNAQGDNKS
FFTGIPTHFIDLDQLIHGFSPSNLMILAARPAMGKTALALNIAENLCFQN
RLPIGIFSLEMTVDQLIHRMICSRSEVDSKKISIGDLSGHDFQRIVSVIN
EMQEHTLLIDDQPGLKVSDLRARARRMKESYDIQFLIIDYLQLLSGSGTL
RATESRQTEISEISRMLKTLARELNIPILCLSQLSRKVEDRANHRPMMSD
LRESGSIEQDSDLVMFLLRREYYDPNDKPGTAELIIAKNRHGSIGSVPLV
FEKELARFRNYSAFECIS
>CpB0278 dnaX, DNA-directed DNA polymerase III chain
MLSSSPGSEHKVSQKIHPDIYQFFPEGKGRLHSIDLPRGIKKQIYISPFE
ANYKIYIIHEADRMTLAAISAFLKVFEEPPKHAVIILTTAKVQRLPKTII
SRSLSIFIERGEKILCSKETFSYLFRYAQCEIPVTEVSQIIKESSETDKQ
VLRDKVQRFMEVLLELYRDRYTLNLGLKASALNYPEHVKEILQLPLLPLD
KVLLIVESACRSLNNSSSAASVLEWVAIQLVSLQYKEKELVSVSPGQDLS
N
>CpB0815 mttC, MttC
MDLADAHVHLSDDAFEEDINSVLQRAQDSGVSLVVNVTTTEKELNRSFAY
AERFPKIRFCHVGGTPPQDVDQDIEEDYRNFHAAAHSKKLAAIGEVGLDY
CFATEEGIARQKEVLQRYLALSLECELPLVVHCRGAFNDFFRMLDQYYHN
DPRSRPGMLHCFTGTLEEAQELISRGWFISISGIVTFKNAQDLRDLVVEL
PLEHLLIETDAPFLAPVPYRGKKNEPAHVLHTINAVANVKGMFPQELAAL
AYKNVLRFLHG
>CpB0841 mutL, MutL
MSTRRPIQLLDPLTINQIAAGEVIENSVSVVKELIENSLDAGADEIEIET
LGGGQGAIIIRDNGCGFRAEDIPIALQRHATSKIREFSDIFSLNSFGFRG
EALPSIASISKMEIQSSIEGDEGVRTVIHGGDIVSCEPCARQLGTTVIVN
SLFYNVPVRRGFQKSMQSDRLGIRKLIENRILSTANIGWSWISEGHHEIQ
IAKQQGFQERVAYVMGDHFMQDALTIDKEANGVRIVGVLGSPSFHRPTRQ
GQKIFINDRPIESLFISKKVGDAYALLLPLHRYPVFVLKLYLPSSWCDFN
VHPQKIEARILKEELVGDCIKEAIVETLACPPGILCRTHQEIEESDSVPL
PMFRMLETSDVQEEESVEFDQNLFAYSSEDVSLEKQEYTSRGPKSQMDWI
YSSDVRFLTSLGRVVLAEDLEGVHIIFTAAARKHLFFLSLMQENSRMYQS
QALLIPLRLQVTPEEAFFFSHHGRTLCDLGIEISQVGPCVFSIESTPTVI
GEEELKEWLLLLAARGSTDINSEALTALMKETLTQATFSKHQHVFDVSWL
KLLWSVGKPEKGFDGARIRRLILDSDFMEG
>CpB0975 mutS, MutS
MTEKKPTPMMEQWHQCKEKAGDSVLLFRMGDFYEAFYDDAVLLSQHLELT
LTQRQGIPMSGIPVSTVDTYVDRLIGKGFKVAVAEQFGEPAKEKESKKIG
PMARDIQRFVTPGTLLSSTLLQEKFNNYIVAINRIGSLFGFACLDLSTGS
FFIEECENTKELVDEICRLAPSEVLSCNKFYNKETAIVMQLQQHLKLTLS
TYADWAFEHKFASQKLTTHFQVASLDGFGLKGLVPAINAAGGLLSYIQDK
LLLPTKHIAIPQTRGKQQKLLIDTASQVNLELLAPLNDPQGKNSLLRIMD
HTSTPMGGRLLRQILISPFYNPKEILVRQDAVEFFLRQVTLRKNIKTYLC
QVRDIERLMTKVTTGLAGPRDIGTLRDSFSAGAQIYEQLASATLPEFFID
KCSLDTKLASLIALLSKSLNGDLPLRVSDGNIFVDEFHNDLKRLRHNQEH
SQEWIWEYQERIRKETGIKKLKICFAQALGYYIEVSSEFAPQLPKDFIRR
QSRLHAERFTTIELQQFQDDMSNISEKLQTLETQFFKDLCSHILQLRTEI
LALSQSLADLDYIISLADLAHAQGYCRPRVDMSDTLCIYRGCHPVAKTLV
DTGKFIPNDTEMRGSQTRMILLTGPNMAGKSTYIRQIALLVIMAQMGSYI
PAKSAHIGVIDKIFTRIGAGDNLSKGMSTFMVEMAETANILHNATDRSLV
ILDEVGRGTSTYDGLAIAQAVVEYLLFTDKKKAKTLFATHYKELTTLEDH
CPHVENFHAGVKDKAGQPVFLYEILKGHSQKSFGIHVARLAGFPLCVVSR
AQQILRQLEGPESITRPAQDKMQQLTLF
>CpB0095 pkn1, Pkn1
MERYDIVRIIGKGGMGEVYLAYDPVCSRKVALKKIREDLAENPLLKRRFL
REARIAADLIHPGVVPVYTIYSEKDPVYYTMPYIEGYTLKTLLKSVWQKE
SLSKELAEKTSVGAFLSIFHKICCTIEYVHSRGILHRDLKPDNILLGLFS
EAVILDWGAAVACGEEEDLLDIDVSKEEVLSSRMTIPGRIVGTPDYMAPE
RLLGHPASKSTDIYALGVVLYQMLTLSFPYRRKKGKKIVLDGQRIPSPQE
VAPYREIPPFLSAVVMRMLAVDPQERYSSVTELKEDIESHLKGSPKWTLT
TALPPKKSSSWKLNEPILLSKYFPMLEVSPASWYSLAISNIESFSEMRLE
YTLSKKGLNEGFGILLPTSENALGGDFYQGYGFWLHIKERTLSVSLVKNS
LEIQRCSQDLESDKETFLIALEQHNHSLSLFVDGTTWLIHMNYLPSRSGR
VAIIVRDMEDILEDIGIFESSGSLRVSCLAVPDAFLAEKLYDRALVLYRR
IAESFPGRKEGYEARFRAGITVLEKASTDNNEQEFALAIEEFSKLHDGVA
APLEYLGKALVYQRLQEYNEEIKSLLLALKRYSQHPEIFRLKDHVVYRLH
ESFYKRDRLALVFMILVLEIAPQAITPGQEEKILVWLKDKSRATLFCLLD
PTVLELRSSKMELFLSYWSGFIPHLNSLFHRAWDQSDVRALIEIFYVACD
LHKWQFLSSCIDIFKESLEDQKATEEIVEFSFEDLGAFLFAIQSIFNKED
AEKIFVSNDQLSPILLVYIFDLFANRALLESQGEAIFQALDLIRSKVPEN
FYHDYLRNHEIRAHLWCRNEKALSTIFENYTEKQLKDEQHELFVLYGCYL
ALIQGAEAAKQHFDVCREDRIFPASLLARNYNRLGLPKDALSYQERRLLL
RQKFLYFHCLGNHDERDLCQTMYHLLTEEFQL
>CpB0955 priA, primosomal replication factor Y
MGYIESSTFRLYAEVIVGSNINKVLDYGVPENLEHITKGTAVTISLRGGK
KVGVIYQIKTTTQCKKILPILGLSDSEIVLPQDLLDLLFWISQYYFAPLG
KTLKLFLPAISSNVIQPKQHYRVVLKQSKAKTKEILAKLEVLHPSQGAVL
KILLQHASPPGLSSLMETAKVSQSPIHSLEKLGILDIVDAAQLELQEDLL
TFFPPAPKDLHPEQQSAIDKIFSSLKTSQFHTHLLFGITGSGKTEIYLRA
TSEALKQGKSTILLVPEIALTVQTVSLFKARFGKDVGVLHHKLSDSDKSR
TWRQASEGSLRILIGPRSALFCPMKNLGLIIVDEEHDPAYKQTESPPCYH
ARDVAVMRGKLAHATVVLGSATPSLESYTNALSGKYVLSRLSSRAAAAHP
AKISLINMNLEREKSKTKILFSQPVLKKIAERLEVGEQVLIFFNRRGYHT
NVSCTVCKHTLKCPHCDMVLTFHKYANVLLCHLCNSSPKDLPQSCPKCLG
TMTLQYRGSGTEKIEKILQQIFPQIRTIRIDSDTTKFKGSHETLLRQFAT
GKADVLIGTQMIAKGMNFSAVTLAVILNGDSGLYIPDFRASEQVFQLITQ
VAGRSGRSHLPGEILIQSFLPDHPTIHSAMRQDYSAFYSQEITGRELCEY
PPFIRLIRCIFMGKCPKQTWEEAHRVHNILKEQLESTNPLMPVTPCGHFK
IKDTFRYQFLIKSAYVIPVNKKLHHALMLAKLSPKVKFMIDVDPMTTFF
>CpB0790 recA, RecA
MNLPDRKKALEAAVAYIEKQFGAGSIMSLGRHSATHEISTIKTGALSLDL
ALGIHGVPKGRVIEIFGPESSGKTTLATHIVANAQKMGGVAAYIDAEHAL
DPSYASLIGVNIDDLMISQPDCGEDALSIAELLARSGAVDVIVIDSVAAL
VPKSELEGDIGDVHVGLQARMMSQALRKLTATLSRSQTCAVFINQIREKI
GVSFGNPETTTGGRALKFYSSIRLDIRRIGSIKGSDNSDIGNRIKVKVAK
NKLAPPFRIAEFDILFNEGISSAGCILDLAVEYNIIEKKGSWFNYQEKKL
GQGREFVREELKRNRKLFKEIEKRIYDVIAANKTPSVHANETPQEVPAQT
VEA
>CpB0780 recD, exonuclease V alpha-subunit
MHTEFAPFLEDLVHQQVISPLDIAFASKHISSDFEESFVFLAVSSALWRY
GHPFLSLEENRIRPSLGGISETDLYRGFHNLPKEVRDKLFVVVSGRLYLR
SLYTIRSKLLDKLSLLCSATPNYFPPSIDSSILSEEQNFIFNKITQGCFS
IVSGGPGTGKTFLAAQLILSLVKQQPKLRIAIVSPTGKATSHIRQILMKY
NIFDDMVLMQTVHHFLQEYAYRRYNSIDVLLVDEGSMVTFDLLYSLVQTL
QGYEKDKKLYTSSLIILGDTNQLPPIGIGVGNPLQDLIGYFHENTFFLKT
SHRAKTGVVDQLTQSVLRGEMISFSPLPSISSAIEVLKNRFVKSLRQSEA
RLCVLTPMRHGPWGVLNLNTMIHQRLARSDPDLRIPIMVTSRYETWGLFN
GDTGLLCLKTQKLHFPQHEPIDSRALSQYVYNYVMSVHKSQGSEYDEVIV
IIPKGSEVFGVSILYTAITRAKYRVSVWGDPETLHKIIKKSNY
>CpB0585 recJ, ssDNA-specific exonuclease
MTNSDNASAAGLLWAHPKEDPAFLGMIIKEFHLPPTVAQIFISRGFQTIQ
EIHKFLYSHLSSLYDPGLFLDMSKAVERLLLARDRKEHVMIYGDSDVDGM
TGVALLVEFLRDIDVHVSYFFLGAILKQHGETSTLIAKLKEEGITLLITV
DCGITAGKEVSDITRQGIDVIITDHHMPTGKIPHCVATLNPKLRDHTYPN
RELTGVGVAFKLARGVLNALISRNLVPKSQGSLKKLLDLVTLGTITDVGV
LLGENRVMVRYGIKEIARGARPGLNKLCALCGVEKSEVTSTDIVLKIAPK
LNSLGRLDDPAKGVELLLTQDDERVDALIMELDNINRERQRIEAEVFQDV
QEILNSNPEILKQAAIVLSSTAWHARVIPIISARLAKTYNKPVVIIAIQR
GIGKGSARTIGSFPLLGVLKKCSSLLLSYGGHDFAAGVIMKEDKVEDFKK
KFVHLVNSSLKKGDTLPHLEIDAYADFDAIDYDLLASMELFEPFGKGNLM
PIFYSKVRQVRYPKVLPGNHLKLYLSQKERNLEGVAFGLGRHADALKASW
HYPLEIAYTPRLSQTSGSGVIHLLVRDFRISSEPRFSD
>CpB0308 recR, RecR
MTRYPDYLSKLIFFLRKLPGIGFKTAEKLAFELISWDSEQLKILGNAFHN
VASERSHCPLCFTLKESKEADCHFCREERDNQSLCIVASPKDVFFLERSK
VFKGRYHVLGSLLSPITGKHIENERLSILKSRIETLCPKEIILAIDATLE
GDATALFLKQELQHFSVNISRLALGLPIGLSFDYVDSGTLARAFSGRHSY
>CpB0646 ruvA, RuvA
MYDYIRGTLTYVHTGAIVIECQGIGYHIAITERWAIECIRALHQDFLVFT
HVIFRETEHLLYGFHSREERECFRILISFSGIGPKLALAILNALPLKVLC
SVVRSEDIRALASVSGIGKKTAEKLMVELKQKLPDLLPLDSRVETSQTHT
TSSCLEEGIQALAALGYSKIAAERMIAEAIKDLPEGSSLTDILPIALKKN
FSGVNKD
>CpB0402 ruvB, Holliday junction DNA helicase
MTHQVAVLHQDKKFDVSLRPKGLEEFYGQHHLKERLDLFLCAALQRGEVP
GHCLFFGPPGLGKTSLAHIVAYTVGKGLVLASGPQLIKPSDLLGLLTSLQ
EGDVFFIDEIHRMGKVAEEYLYSAMEDFKVDITIDSGPGARSVRVDLAPF
TLVGATTRSGMLSEPLRARFAFSARLSYYSDQDLKEILVRSSHLLGIEAD
SSALLEIAKRSRGTPRLANHLLRWVRDFAQIREGNCINGDVAEKALAMLL
IDDWGLNEIDIKLLTTIIDYYQGGPVGIKTLSVAVGEDIKTLEDVYEPFL
ILKGFIKKTPRGRMVTQLAYDHLKRHAKNLLSLGEGQ
>CpB0647 ruvC, RuvC
MSELIIGVDPGTIVAGYAIIAVEQRYQLRPYSYGAIRLSSDMPLPMRYKT
LFEQLSGVLDDTQPNAMVLETQFVNKNPQSTMKLAMARGIVLLAAAQRDI
LIFEYAPNVAKKAVVGKGHASKRQVQVMVSKILNVPEVLHPSNEDIADAF
ALAICHTHVARSPLCGVR
>CpB0028 xerC, site-specific integrase/recombinase
MIASIYSFLDYLKMVKSASPHTLRNYCLDLNGLKIFLEERGNLAPSSPLQ
LATEKRKVSELPFSLFTKEHVRMYIAKLIENGKAKRTIKRCLSSIKSFAH
YCVIQKILLENPAETIHGPRLPKELPSPMTYAQVEVLMATPDISKYHGLR
DRCLMELFYSSGLRISEIVAVNKQDFDLSTHLIRIRGKGKKERIIPVTSN
AIQWIQIYLNHPDRKRLEKDPQAIFLNRFGRRISTRSIDRSFQEYLRRSG
LSGHITPHTIRHTIATHWLESGMDLKTIQALLGHSSLETTTVYTQVSVKL
KKQTHQEAHPHA
>CpB1063 xerD, tyrosine recombinase
MPSTQFHTTILEQFSLFLSVDRGLCQQSIAAYRQDISSFLTISAISSPQD
ISQNSVYIFAEELYRRKEAETTLARRLIALKVFFLFLKDQQLLPYPPIIE
HPKIWKRLPSVLTPQEVDALLAVPLQMEKNPRHLAFRDTAILHTLYSTGV
RVSELCDLRLGHVSDDCIRVTGKGSKTRLVPLGSRAREAIDAYLCPFRDQ
YQKKNPHEDHLFLSTRGHKLERSCVWRRIHNYAKQVTSKPVSPHSLRHAF
ATHLLDNKADLRVIQEMLGHARIASTEVYTHVAADSLIEKFLAHHPRNL