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2024-05-19 14:48:45

Gene list

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COG category: Replication, recombination and repair
Organism: Chlamydophila pneumoniae TW-183, TW-183

Number of genes found: 72

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Chlamydophila pneumoniae TW-183, TW-183
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA CpB1097 Hb4SubName: Full=Hb4; SubName: Full=Uncharacterized protein; chromosome CDS1205398 831 + 0.430806
NA CpB0010 HB3 proteinSubName: Full=HB3 protein; SubName: Full=Uncharacterized protein; chromosome CDS11815 1308 + 0.41208
NA CpB0120 ribonuclease H IIRecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; chromosome CDS148018 645 + 0.403101
NA CpB0949 diadenosine tetraphosphataseSubName: Full=Diadenosine tetraphosphatase; SubName: Full=Hydrolase/phosphatase homolog; SubName: Full=MutT/Nudix family protein; chromosome CDS1045440 453 + 0.368653
NA CpB1098 pHB5 proteinSubName: Full=PHB5 protein; SubName: Full=Uncharacterized protein; chromosome CDS1206231 705 + 0.409929
NA CpB0922 transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS1015139 3258 - 0.413137
NA CpB0045 HB2 proteinSubName: Full=HB2 protein; SubName: Full=Uncharacterized protein; chromosome CDS55995 1350 + 0.432593
NA CpB0358 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS390681 507 + 0.398422
NA CpB0008 HB1 proteinSubName: Full=HB1 protein; chromosome CDS7605 2895 + 0.408981
NA CpB0765 putative exodeoxyribonuclease V gammaSubName: Full=Exodeoxyribonuclease V, Gamma; SubName: Full=Putative exodeoxyribonuclease V gamma; chromosome CDS824991 3075 + 0.382114
NA CpB0044 DNA polymerase III (gamma and tau subunits) dnaXSubName: Full=DNA Polymerase III Gamma and Tau; SubName: Full=DNA polymerase III (Gamma and tau subunits) dnaX; SubName: Full=DNA polymerase III, gamma subunit; chromosome CDS54314 1329 - 0.407073
NA CpB0491 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS545568 1347 - 0.463252
NA CpB0347 DNA-directed DNA polymerase III beta chainRecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; chromosome CDS379692 1101 + 0.40327
NA CpB0219 mammalian coiled coil synaptonemal complex proteinSubName: Full=Mammalian coiled coil synaptonemal complex protein; SubName: Full=Uncharacterized protein; chromosome CDS253170 1260 - 0.392063
NA CpB0692 DNA-directed DNA polymerase III alpha chainRecName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7; chromosome CDS743710 3723 + 0.402632
NA CpB1033 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1138100 2046 + 0.378788
NA CpB0760 endonuclease IVRecName: Full=Probable endonuclease 4; EC=3.1.21.2; AltName: Full=Endodeoxyribonuclease IV; AltName: Full=Endonuclease IV; chromosome CDS819405 882 + 0.405896
NA CpB0801 uracil DNA glycosylaseRecName: Full=Uracil-DNA glycosylase; Short=UDG; EC=3.2.2.27; chromosome CDS869810 711 + 0.419128
NA CpB0743 DNA gyrase subunit BSubName: Full=DNA Gyrase Subunit B; SubName: Full=DNA gyrase subunit B; SubName: Full=DNA gyrase, subunit B; chromosome CDS798964 1809 + 0.380873
NA CpB0830 excinuclease ABC chain BRecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; chromosome CDS904046 1974 - 0.43769
NA CpB0636 DNA-directed DNA polymerase ISubName: Full=DNA-directed DNA polymerase I; chromosome CDS699341 2613 - 0.381171
NA CpB0629 putative methylaseSubName: Full=Methylase; SubName: Full=Predicted Methylase; SubName: Full=Putative methylase; SubName: Full=Uncharacterized protein; chromosome CDS693469 561 - 0.390374
NA CpB0733 hypothetical proteinSubName: Full=Putative uncharacterized protein CPn0706 Homolog; SubName: Full=Uncharacterized protein; chromosome CDS790499 507 - 0.392505
NA CpB0620 methylated-DNA-protein-cysteineS-methyltransferaseSubName: Full=DNA methyltransferase; SubName: Full=Methylated-DNA-protein-cysteine S-methyltransferase; SubName: Full=Methyltransferase; chromosome CDS683261 522 + 0.438697
NA CpB0150 DNA ligase (NAD+)RecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; chromosome CDS183210 1989 + 0.414781
NA CpB0124 exodeoxyribonuclease V 67K chainSubName: Full=Exodeoxyribonuclease V (Alpha Subunit); SubName: Full=Exodeoxyribonuclease V 67K chain; SubName: Full=Exodeoxyribonuclease V, alpha subunit; chromosome CDS151266 2199 - 0.396089
NA CpB0282 DNA gyrase subunit BRecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome CDS305783 2418 - 0.392473
NA CpB0681 DNA polymerase IIISubName: Full=DNA Polymerase III Epsilon Chain; SubName: Full=DNA polymerase III; SubName: Full=DNA polymerase III epsilon chain; SubName: Full=DNA polymerase III, epsilon subunit, putative; chromosome CDS734420 750 - 0.372
NA CpB0398 putative ssDNA binding proteinRecName: Full=Single-stranded DNA-binding protein; Short=SSB; chromosome CDS431543 483 - 0.416149
NA CpB0281 DNA topoisomerase IV subunit ARecName: Full=DNA gyrase subunit A; EC=5.99.1.3; chromosome CDS303263 2505 - 0.40998
NA CpB0878 swf/snf helicaseSubName: Full=Helicase, Snf2 family; SubName: Full=SWI/SNF family helicase_2; SubName: Full=Swf/snf helicase; chromosome CDS959111 3501 + 0.405884
NA CpB0730 serine/threonine-protein kinaseSubName: Full=Serine/threonine-protein kinase; chromosome CDS787004 1509 - 0.402916
NA CpB0149 protein kinaseRecName: Full=Serine/threonine-protein kinase pkn1; EC=2.7.11.1; chromosome CDS181341 1860 + 0.406989
NA CpB0974 exinuclease ABC subunit CRecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; chromosome CDS1068551 1812 - 0.415011
NA CpB0415 A/G-specific adenine glycosylaseSubName: Full=A/G-specific adenine glycosylase; SubName: Full=Adenine Glycosylase; SubName: Full=Adenine glycosylase; chromosome CDS445385 1110 - 0.408108
NA CpB0613 hypothetical proteinRecName: Full=DNA repair protein RecO; AltName: Full=Recombination protein O; chromosome CDS675962 759 + 0.413702
NA CpB0526 N-methylpurine-DNA glycosylaseRecName: Full=Putative 3-methyladenine DNA glycosylase; EC=3.2.2.-; chromosome CDS585841 591 + 0.460237
NA CpB1100 hypothetical proteinRecName: Full=Protein CPn_1058/CP_0792/CPj1058/CpB1100; Flags: Precursor; chromosome CDS1209452 1092 + 0.418498
NA CpB0866 endonuclease IIIRecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; chromosome CDS944465 630 - 0.422222
NA CpB1105 exodeoxyribonuclease VII large chainRecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit; chromosome CDS1213860 1665 - 0.436637
NA CpB0800 UvrDSubName: Full=UvrD; chromosome CDS867788 1920 - 0.401563
NA CpB1112 ribonuclease HIIRecName: Full=Ribonuclease HIII; Short=RNase HIII; EC=3.1.26.4; chromosome CDS1218066 897 - 0.395764
NA CpB0744 DNA topoisomerase IV subunit ASubName: Full=DNA Gyrase Subunit A; SubName: Full=DNA gyrase, subunit A; SubName: Full=DNA topoisomerase IV subunit A; chromosome CDS800776 1437 + 0.409882
NA CpB0864 SNF proteinSubName: Full=Helicase, Snf2/Rad54 family; SubName: Full=SNF protein; SubName: Full=SWI/SNF family helicase_1; chromosome CDS939365 3648 - 0.408443
NA CpB0432 integration host factor beta chainRecName: Full=Probable DNA-binding protein HU; chromosome CDS459054 303 - 0.40264
NA CpB0767 exodeoxyribonuclease V 135K chainRecName: Full=RecBCD enzyme subunit RecB; EC=3.1.11.5; AltName: Full=Exonuclease V subunit RecB; Short=ExoV subunit RecB; AltName: Full=Helicase/nuclease RecBCD subunit RecB; chromosome CDS828052 3153 + 0.378053
NA CpB0977 DNA primaseRecName: Full=DNA primase; EC=2.7.7.-; chromosome CDS1073335 1773 + 0.402707
NA CpB0700 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS752609 180 + 0.383333
NA CpB0096 excinuclease ABC chain ARecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; chromosome CDS116329 5481 - 0.422368
NA CpB0395 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS428246 948 - 0.424051
NA CpB0440 replication initiation protein dnaARecName: Full=Chromosomal replication initiator protein DnaA 2; chromosome CDS467113 1353 + 0.377679
NA CpB1104 exodeoxyribonuclease VII small chainRecName: Full=Exodeoxyribonuclease 7 small subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit; chromosome CDS1213629 228 - 0.429825
NA CpB0243 hypothetical proteinRecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; chromosome CDS271176 456 + 0.39693
NA CpB0128 HB7 proteinSubName: Full=HB7 protein; chromosome CDS156304 2280 + 0.398246
NA CpB0426 DNA-directed DNA polymerase III alpha chainSubName: Full=DNA-directed DNA polymerase III alpha chain; chromosome CDS452638 699 + 0.41774
dnaA CpB0317 replication initiation proteinRecName: Full=Chromosomal replication initiator protein DnaA 1; chromosome CDS347006 1383 - 0.373102
dnaB CpB0641 replicative DNA helicaseSubName: Full=Replicative DNA helicase; chromosome CDS706056 1407 + 0.399431
dnaX CpB0278 DNA-directed DNA polymerase III chainSubName: Full=DNA-directed DNA polymerase III chain; chromosome CDS301751 756 - 0.382275
mttC CpB0815 MttCSubName: Full=MttC; SubName: Full=MttC protein, putative; SubName: Full=PHP superfamily (Urease/pyrimidinase) hydrolase; chromosome CDS882941 786 + 0.438931
mutL CpB0841 MutLRecName: Full=DNA mismatch repair protein MutL; chromosome CDS916446 1743 + 0.428571
mutS CpB0975 MutSRecName: Full=DNA mismatch repair protein MutS; chromosome CDS1070365 2487 - 0.419381
pkn1 CpB0095 Pkn1RecName: Full=Serine/threonine-protein kinase PknD; EC=2.7.11.1; chromosome CDS113490 2799 + 0.406217
priA CpB0955 primosomal replication factor YRecName: Full=Primosomal protein N; EC=3.6.4.-; AltName: Full=ATP-dependent helicase PriA; chromosome CDS1052375 2250 - 0.428889
recA CpB0790 RecARecName: Full=Protein RecA; AltName: Full=Recombinase A; chromosome CDS855858 1062 - 0.416196
recD CpB0780 exonuclease V alpha-subunitSubName: Full=Exodeoxyribonuclease V, alpha; SubName: Full=Exodeoxyribonuclease V, alpha subunit, putative; SubName: Full=Exonuclease V alpha-subunit; chromosome CDS845926 1482 + 0.397436
recJ CpB0585 ssDNA-specific exonucleaseSubName: Full=Single-stranded-DNA-specific exonuclease RecJ; SubName: Full=SsDNA Exonuclease; SubName: Full=SsDNA exonuclease; SubName: Full=SsDNA-specific exonuclease; chromosome CDS645612 1767 - 0.433503
recR CpB0308 RecRRecName: Full=Recombination protein RecR; chromosome CDS334230 603 + 0.363184
ruvA CpB0646 RuvARecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; chromosome CDS710838 624 - 0.413462
ruvB CpB0402 Holliday junction DNA helicaseRecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; chromosome CDS435631 1014 - 0.427022
ruvC CpB0647 RuvCRecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; chromosome CDS711463 507 - 0.424063
xerC CpB0028 site-specific integrase/recombinaseRecName: Full=Tyrosine recombinase XerC; chromosome CDS36657 939 - 0.42066
xerD CpB1063 tyrosine recombinaseRecName: Full=Tyrosine recombinase XerD; chromosome CDS1172034 900 - 0.462222