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2024-05-17 11:23:56

Gene list

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COG category: Replication, recombination and repair
Organism: Yersinia pestis CO92, CO-92 Biovar Orientalis

Number of genes found: 47

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Yersinia pestis CO92, CO-92 Biovar Orientalis
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
YPCD1.01 putative transposaseSubName: Full=IS transposase; SubName: Full=ORF 78; SubName: Full=ORF12; SubName: Full=Putative transposase; SubName: Full=Putative transposase, N end of IS100 transframe protein; SubName: Full=Putative transposase-orf1 protein; SubName: Full=Transposase; SubName: Full=Transposase for insertion sequence IS100; pCD1 CDS88 1023 + 0.527859
YPCD1.02 putative ATP-binding proteinSubName: Full=ATP-binding protein; SubName: Full=ORF 77; SubName: Full=ORF11; SubName: Full=Putative ATP-binding protein; SubName: Full=Putative transposase; SubName: Full=Transposase; pCD1 CDS1110 780 + 0.503846
YPCD1.04 SubName: Full=YPCD1.04 protein; Flags: Fragment; pCD1 CDS2304 648 + 0.546296
YPCD1.14c putative transposase remnantSubName: Full=Putative transposase remnant; Flags: Fragment; pCD1 CDS9123 264 - 0.503788
YPCD1.15c hypothetical protein YPCD1.15cSubName: Full=Transposase; SubName: Full=Uncharacterized protein; pCD1 CDS9429 459 - 0.551198
YPCD1.16c hypothetical protein YPCD1.16cSubName: Full=Uncharacterized protein; pCD1 CDS9911 324 - 0.481481
YPCD1.25 SubName: Full=YPCD1.25 protein; Flags: Fragment; pCD1 CDS15976 318 + 0.440252
YPCD1.63 putative transposase ORFARecName: Full=Low calcium response locus protein S; pCD1 CDS45581 267 + 0.434457
YPCD1.64 putative transposase ORFBRecName: Full=Low calcium response locus protein T; pCD1 CDS45871 435 + 0.455172
YPCD1.65 putative transposaseSubName: Full=Putative transposase; pCD1 CDS46302 309 + 0.459547
YPCD1.66 SubName: Full=YPCD1.66 protein; Flags: Fragment; pCD1 CDS46623 279 + 0.473118
YPCD1.68c SubName: Full=O68; SubName: Full=Uncharacterized protein; SubName: Full=YPCD1.68c protein; pCD1 CDS48811 207 - 0.608696
YPCD1.69 SubName: Full=YPCD1.69 protein; Flags: Fragment; pCD1 CDS49044 582 + 0.493127
YPCD1.72c putative targeted effector protein kinaseRecName: Full=Protein kinase YpkA; Short=Protein kinase A; EC=2.7.11.1; AltName: Full=Targeted effector protein kinase; Flags: Precursor; pCD1 CDS51473 2199 - 0.481583
YPCD1.75c SubName: Full=YPCD1.75c protein; Flags: Fragment; pCD1 CDS54541 153 - 0.509804
YPCD1.81 SubName: Full=YPCD1.81 protein; Flags: Fragment; pCD1 CDS58307 234 + 0.542735
YPCD1.82c hypothetical protein YPCD1.82cSubName: Full=Uncharacterized protein; pCD1 CDS58523 408 - 0.539216
YPCD1.83c hypothetical protein YPCD1.83cSubName: Full=Uncharacterized protein; pCD1 CDS58954 324 - 0.487654
YPCD1.84c hypothetical protein YPCD1.84cSubName: Full=Putative DNA helicase; SubName: Full=Uncharacterized protein; pCD1 CDS59443 492 - 0.554878
YPCD1.85 SubName: Full=YPCD1.85 protein; Flags: Fragment; pCD1 CDS59946 294 + 0.503401
YPCD1.90c putative transposaseSubName: Full=Putative transposase; SubName: Full=Transposase (Tn1000) homolog; pCD1 CDS62851 2316 - 0.519862
YPCD1.91 putative resolvaseSubName: Full=Putative resolvase; SubName: Full=Resolvase; SubName: Full=Transposon gamma-delta resolvase (Transposon TN1000) homolog; pCD1 CDS65330 552 + 0.46558
YPCD1.93 putative transposaseSubName: Full=Putative IS1617 transposase; SubName: Full=Putative transposase; SubName: Full=Transposase; pCD1 CDS66932 267 + 0.479401
YPCD1.94 putative transposaseSubName: Full=Putative transposase; pCD1 CDS67222 810 + 0.504938
YPCD1.96c putative transposaseSubName: Full=Putative transposase; pCD1 CDS68947 432 - 0.569444
YPCD1.97c putative transposaseSubName: Full=Putative transposase; pCD1 CDS69378 927 - 0.558792
YPMT1.01 putative transposaseSubName: Full=IS transposase; SubName: Full=ORF 78; SubName: Full=ORF12; SubName: Full=Putative transposase; SubName: Full=Putative transposase, N end of IS100 transframe protein; SubName: Full=Putative transposase-orf1 protein; SubName: Full=Transposase; SubName: Full=Transposase for insertion sequence IS100; pMT1 CDS87 1023 + 0.527859
YPMT1.02 putative transposaseSubName: Full=ATP-binding protein; SubName: Full=IS transposase; SubName: Full=Insertion sequence IS100, ATP-binding protein; SubName: Full=Putative ATP-binding protein; SubName: Full=Putative IS100 transposase; SubName: Full=Putative transposase; SubName: Full=Putative transposase ATP-binding protein; SubName: Full=Putative transposase C end of IS100 transframe protein; SubName: Full=Putative transposase-orf2 protein; SubName: Full=Uncharacterized protein; pMT1 CDS1106 783 + 0.50447
YPMT1.16c hypothetical protein YPMT1.16cSubName: Full=Uncharacterized protein; pMT1 CDS20237 474 - 0.544304
YPMT1.30 hypothetical protein YPMT1.30SubName: Full=Uncharacterized protein; pMT1 CDS32138 1560 + 0.514103
YPMT1.37c putative transposaseSubName: Full=Putative transposase; SubName: Full=Transposase; SubName: Full=Transposase for the IS1541 insertion element; pMT1 CDS38084 459 - 0.457516
YPMT1.40c putative exonuclease subunit 2SubName: Full=Putative exonuclease subunit 2; pMT1 CDS40069 1917 - 0.529995
YPMT1.41c putative exonuclease subunit 1SubName: Full=Putative exonuclease subunit 1; SubName: Full=Uncharacterized protein; pMT1 CDS42215 1086 - 0.540516
YPMT1.50c putative recombinaseSubName: Full=Putative recombinase; pMT1 CDS51271 1077 - 0.545961
YPMT1.51c putative exonucleaseSubName: Full=Putative exonuclease; SubName: Full=Uncharacterized protein; pMT1 CDS52616 945 - 0.526984
YPMT1.53c hypothetical protein YPMT1.53cSubName: Full=Uncharacterized protein; pMT1 CDS54769 474 - 0.5
YPMT1.57c putative IS100 transposaseSubName: Full=ATP-binding protein; SubName: Full=IS transposase; SubName: Full=Insertion sequence IS100, ATP-binding protein; SubName: Full=Putative ATP-binding protein; SubName: Full=Putative IS100 transposase; SubName: Full=Putative transposase; SubName: Full=Putative transposase ATP-binding protein; SubName: Full=Putative transposase C end of IS100 transframe protein; SubName: Full=Putative transposase-orf2 protein; SubName: Full=Uncharacterized protein; pMT1 CDS57333 783 - 0.50447
YPMT1.58c putative transposaseSubName: Full=IS transposase; SubName: Full=ORF 78; SubName: Full=ORF12; SubName: Full=Putative transposase; SubName: Full=Putative transposase, N end of IS100 transframe protein; SubName: Full=Putative transposase-orf1 protein; SubName: Full=Transposase; SubName: Full=Transposase for insertion sequence IS100; pMT1 CDS58112 1023 - 0.527859
YPMT1.64c putative DNA methylaseSubName: Full=Adenine-specific methyltransferase; SubName: Full=Putative DNA methylase; SubName: Full=Putative hemagglutinin-associated protein; SubName: Full=Uncharacterized protein; pMT1 CDS64672 678 - 0.581121
YPMT1.70 putative resolvaseSubName: Full=Putative resolvase; SubName: Full=Putative site-specific recombinase; pMT1 CDS71216 621 + 0.495974
YPMT1.75c hypothetical protein YPMT1.75cSubName: Full=Uncharacterized protein; pMT1 CDS76455 471 - 0.558386
YPMT1.77c SubName: Full=YPMT1.77c protein; Flags: Fragment; pMT1 CDS77583 84 - 0.416667
YPMT1.79c putative transposaseSubName: Full=Putative transposase; SubName: Full=Transposase; pMT1 CDS78286 1023 - 0.519062
YPMT1.80c putative transposaseSubName: Full=Putative transposase; SubName: Full=Transposase; SubName: Full=Transposase for the IS285 insertion element; pMT1 CDS79777 1209 - 0.496278
YPMT1.85 putative integraseSubName: Full=Putative integrase; SubName: Full=Uncharacterized protein; pMT1 CDS87147 1179 + 0.478372
YPPCP1.01 putative transposaseSubName: Full=IS transposase; SubName: Full=ORF 78; SubName: Full=ORF12; SubName: Full=Putative transposase; SubName: Full=Putative transposase, N end of IS100 transframe protein; SubName: Full=Putative transposase-orf1 protein; SubName: Full=Transposase; SubName: Full=Transposase for insertion sequence IS100; pPCP1 CDS87 1023 + 0.527859
YPPCP1.02 putative ATP-binding proteinSubName: Full=ATP-binding protein; SubName: Full=IS transposase; SubName: Full=Insertion sequence IS100, ATP-binding protein; SubName: Full=Putative ATP-binding protein; SubName: Full=Putative IS100 transposase; SubName: Full=Putative transposase; SubName: Full=Putative transposase ATP-binding protein; SubName: Full=Putative transposase C end of IS100 transframe protein; SubName: Full=Putative transposase-orf2 protein; SubName: Full=Uncharacterized protein; pPCP1 CDS1106 783 + 0.50447