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Gene list

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COG category: Replication, recombination and repair
Organism: Pseudomonas putida
Gene type: CDS

Number of genes found: 14

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# Pseudomonas putida

>gid:868118    putative cointegrate resolution protein S
MKDVGRYLQAGTRENTRRSYQSAIEHFEVTWGGFLPATSDNIARYLVEYA
DTLSLSTLKQRLAALAQWHITQGFPDPTKTPTVRQVLKGIRTLHPAQTKQ
AAPLQLQHLEQAIQWLSREAEQAQQSGNLASLLRSRRDAALLLIGFWRGF
RSDELCRLQVEHIQAEAGAGMSLFLPQSKGDRDNLGTTHYVPALKCLCPV
QAYLDWISAAGIARGAVFCRLDRWGHLSDEALHPGSLISLLRQILQRAGI
SAELYTSHSLRRGFASWATANGWDLKALMTYVGWKDIKSAMRYIDPAISF
GGLAAKPVLELHAGPLGQLSASH
>gid:868136    hypothetical protein
MRILPMSHVSKFTGLHWHTLKALDKLRLEAEAGGIEPGDVRRLGMDEFSL
DKRHRYATVIMDAERTRVLWVGHGTSRQAIRPFFEWPGEHCQHIEAVAMD
MNTAFDLEVKRHCPQAEVVYDLFHVVARYGREVIDRILVDQANLLRDDKP
ARKVVKRSRWLLLKDGQAVQLQELLAANQPLATVYLLKDALKGTSNNARF
SVNPTAK
>gid:868042    putative ligase
MAVKKSQLPARIQPQLVALLTRPPAGEWAYEIKFDGYRMFARIDAGVGLF
TKNGYDWTARMPRLAQDLRSLPIRGAWLDGEVIVQDVEDRPAFQALQEAF
ATGRTDHLVYFAFDLLFIENVDLRSRPVEERRELLRVLLEQVDLDQVRYS
DTLDADPSSLLASACALGIEGIVGKRLGSVYAGERDGSWIKLKCVQRQEF
IILGFTRSSAGIGSLLIGLHNDAGQLQYAGRVRSGFTRRELDRLKERLRP
LVRTTPAMEAPPKLSGAVVWAEPVLVCEVKFAELTPAGKVRHAVYIALRE
DKPASAISLESDTDPV
>gid:868125    transposase subunit B
MHREHQVVARCTVERLMREMGLCGVTRGKTVKTTQPDPDNANPRDLVKRQ
FTAERPNQLWVADFTFVSTWQGFAYVAFIVDVYSRFIVGWRVSRHMRTEF
VLDALEQALHTRRPEPHRLVHHSDRGSQYLSIRYSERLGEAGIEPSVGNT
GDSYDNALAETINGLYKTELIHKRGPWKSVDSLEWETLKWVTWFNHQRLL
EPIGNRPPAEFEALYEQSQATISVAA
>gid:868127    transposase subunit A
MSKHTKFSPEVRDRAIRMVYEVRESRTSQWAAIEAVASKIGCTAQTLSSW
IRKAAAPAAPSASGTDARVKELEREVRELKRANEILKVASAFSAQAELDR
RLK
>gid:868025  res  
MFIRAYLRASTDDQDASRARDSLETFVSSFGLAIAASYMENASGSHANRP
ELIRLLKDAKRGDVLLVESIDRLSRMGDQDWRELKGAIDQRGLRIVAIDL
PTSHQGMTLPTNDEFTDRMLSAINYMMIDMMAAIARKDYQQRRERQSQGI
VKARAAGVYKGRPVDEELRKRVRELLGANLGIRATARHANCSTTTVMRIR
DELSVEPGGNG
>gid:868037  ruvB  
MCSKDPRPIFGLVDVNSFYCSCERIFRPELRHRPVVVLSNSDGCIVARTN
EAKALGLKMGDPYFKVRNFLEQNGVAVFSSNYTLYGELSHRVGVAIASLV
PEWEQYSIDELFVNLDGLPEPIIDVGRAIQARVLQWTALPVGVGIGHTKT
LAKAAQHASKVWREKTGGVVDLRKPDAVEWLLRRMPVDEVWGIGSRMRDN
LARDGITTAWELSQADARAMGRKYSVVLERTIRELQGESCMDLEQTVAPK
QTICSSKMFGQRVHTLQGLQEALATYIHRAAEKLRLQRSLCGAMRIGIQT
SFHGDGPKYANAATCIPAYPTDDVRQLTKYALQAAEQIYRPGFAYSKAEV
LLLDLRKRGEYTQDLFSPSQPERSDALMATMDKINRRWGHDCLRTAAGAT
DP
>gid:868082  ssb  putative SSB protein
MARGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVE
RTEWHRVSLFGKVAEIAGEYLRKGSQCYIEGKLQTREWEKDGIKRYTTEI
IVDMQGTMQLLGGRPQNQQQGGDPYNQGGSNQQPRQQAPRQQRPQQPPAP
QQPAQPAADFDSFDDDIPFMDPYRFNWHLQ
>gid:868208  tnpA  putative transposase
MHFQVDVPDPIACEECGVQGEFVRFGKRDVPYRDLPIHGKRVTLWVVRRR
YTCRACKTTFRPQLPEMVDGFRMTLRLHEYVEKESFNHPYTFVAAQTGLD
EKTVRDIFNARAEFLGRWHRFETPRILGIDELYLNKRYRCILTNIEERTL
LDLLATRRQDVVTNYLMKLKDRQKVEIVSMDMWNPYRAAVKAVLPQARIV
VDKFHVVRMANDALERVRKGLRKELKPSQSRTLKGDRKILLKRAHEVSDR
ERLIMETWTGAFPQLLAAYEHKERFYGIWDATTRLQAEAALDEWIATIPK
GQKEVWSDLVRAVGNWREETMTYFETDMPVTNAYTESINRLAKDKNREGR
GYSFEVMRARMLYTTKHKKKAPTAKVSPFYKKTIGYGLPDFAEELNYGVD
LSTI
>gid:868135  tnpA  putative IS1246 transposase
MVRILVLKRLYNLSDEQMEYQLLDRMSYKRFCGLASAVNIPDRTTVWTFE
NRIGDAGAKVLFDGVTAQLLRHGFIARGGQIVDATLVPAPKQRNSREENK
LVREGAMPANWKPAKRRQKDTDATWTQKHGKNHFGYKLSVNVDKKYKIIR
KFETDTASVHDSKHFDALIDRSNTSGDVYADRGHTSADREGWLKDHGYRN
QIQRKGYRNKPLSECQQRRNHRIAKTRARVEHVFASIEQMGGKLIRTIGQ
GRANFAMTMMAACYNLKRLVYFQKAGIKAF
>gid:868139  tnpA  putative transposase
MRLKYALISQLSADYSVRRLCLTLKVHASGYYAWLAEPKSARAKEDQRLL
GLIKHSWLESGGVYGYRKIHDDLRELGEACGKHRVARLMRLEGLRSQTGY
RRRPGRYGGKPPAASPNHLERRFNVTEPNKVWVTDITYIRTYEGWLYLAV
VLDLFSRQVIGWSMKPQMTSDLAIDALLMAVWRRKPKQEVMIHSDQGSQF
SSGDWQSFLKANNLLGSMSRRGNSHDNAVAESFFQLLKRERIRRKIYSTR
QDARADVFDYIEMFYNPKRRHGFNNQLSPVEFERQHLLSLESV
>gid:868104  tnpR  putative resolvase
MRVSKSDGALSVNLQRDALIAAGVNLAHAYEDHSSGKKLDARPSLTAMLK
ALREGDTLVGWELDRLGGNLRHLINTAHDLTQHGIGFKVLTGHGASIDTT
TPAGRLAFGILAALAEFERELISEHAKAGLVAARARGRKGGAPFKMKAAK
VRLAMAAMGQSGTKVSELCQELGMIRQPLYQHVGSDGSWTTSLSFSCEEA
ATWARQSHMPCIARCQGDCA
>gid:868221  tnpR  Tn4653 resolvase
MQGHRIGYVRVSSFDQNPERQLEQTQVSKVFTDKASGKDTQRPQLEALLS
FVREGDTVVVHSMDRLARNLDDLRRLVQKLTQRGVRIEFLKEGLVFTGED
SPMANLMLSVMGAFAEFERALIRERQREGIALAKQRGAYRGRKKALSDEQ
AATLRQRATAGEPKAQLAREFNISRETLYQYLRTDD
>gid:868242  traC  putative TraC protein
MFNVTLIKGDNQYAAAGYFSNADDYYAKEAPGEWQGIGAELLGLEGAIDQ
KELARLFDGKLPNGERMAKTFDKETGTRRMGLDLTFSAPKSVSMQALIAG
DKDVMAAHDRAVTKSMEEVERLAQTRLKVNGKTMLERSGNLVIGKFRHEM
SRAKDPQMHTHAVVMNMTRRSDGKWRALRNDDIYKIQPQVDAMYKGILAQ
ELRALGYEIRVLDNQGNFELAHISRDQIEAFSSRSKVIEDALAKDGKTRA
DATPLEKQIIAMATRPRKDERDRHLVKEYWVTKARELGIDFGARSHLDNR
EYAPRNGGPAEYSLPQGITPGQAVVQYAINHLTEREQVVGENDLRTVALR
RAVGLATPDQVNDEIRRLVKQGTLIESPPTYRMPNGDLDSPVLSPAGWRA
HLQELKGWSEKEARQYVDKAIKRGSLEPAEKRYTTQKALKREKAILAIER
TGRGQVTPLMTKEQVAKALEGSTLSPGQFQAVEVIVSTNNRFVGIQGDAG
TGKTYSVDRAVKLIDSVNAAMATNNPQDITGYRVVALAPYGNQVTALKNE
GLDAHTLASFFHTKNKGLDAKTIVILDEAGVVGARQMERLMREIEQSGAR
LIQLGDTKQTEAIEAGKPFAQLQQSGMQTARIKEIQRQKDPELKRAVQHA
AEGQPTKSLEHLKHVEELRTASDRHQAIVRDYMALTPDQRKEVLIVAGTN
KDRKEINTMARQALGLFGKGKEFETLNRVDSTDAERRYAPSYKQGMIIQP
EKDYKRAGLVRGELYVVDQALPGNVLVVKDRSGNRFEFNPRQATKLSVYK
LEKPELAVGDLIRINRQDPKLDLTNGDRMRVVSIEGGVVQLASLKEVNGQ
PERTVSLPTNKPLHLEHAYSATVHSAQGLTNDRVMISLNTKSRTTSQNLW
YVAISRARHEARVYADSIKGLPAAIAKRYDKTTALSLQQERERQRRDSIQ
PRTVSDGRALERKQRTGLDGPSSGNARI