Gene list
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COG category: Replication, recombination and repair
Organism: Xanthomonas campestris pv. campestris str. ATCC 33913, ATCC 33913
Number of genes found: 258
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Xanthomonas campestris pv. campestris str. ATCC 33913, ATCC 33913 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
Ada | DNA methylation and regulatory protein Ada or | SubName: Full=DNA methylation and regulatory protein Ada or; | chromosome | CDS | 3141308 | 1464 | + | 0.704235 | |
XCC0015 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 16981 | 1095 | + | 0.686758 | |
XCC0034 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 44888 | 1185 | + | 0.667511 | |
XCC0053 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 67289 | 966 | - | 0.695652 | |
XCC0065 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 79830 | 840 | - | 0.569048 | |
XCC0105 | ATP-dependent DNA ligase | SubName: Full=ATP-dependent DNA ligase; | chromosome | CDS | 126997 | 3006 | + | 0.675316 | |
XCC0127 | IS1479 transposase | SubName: Full=IS1479 transposase; | chromosome | CDS | 162619 | 981 | - | 0.619776 | |
XCC0136 | IS1480 transposase | SubName: Full=IS1480 transposase; | chromosome | CDS | 182656 | 519 | - | 0.56262 | |
XCC0214 | methyltransferase | SubName: Full=Methyltransferase; | chromosome | CDS | 269602 | 1632 | + | 0.531863 | |
XCC0215 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 271235 | 2502 | + | 0.61311 | |
XCC0344 | site-specific recombinase | SubName: Full=Site-specific recombinase; | chromosome | CDS | 413236 | 984 | + | 0.670732 | |
XCC0399 | IS1404 transposase | SubName: Full=IS1404 transposase; | chromosome | CDS | 476652 | 264 | + | 0.590909 | |
XCC0400 | IS1404 transposase | SubName: Full=IS1404 transposase; | chromosome | CDS | 476729 | 1026 | + | 0.617934 | |
XCC0426 | IS1479 transposase | SubName: Full=IS1479 transposase; | chromosome | CDS | 520745 | 213 | + | 0.633803 | |
XCC0521 | ribonuclease | SubName: Full=Ribonuclease; | chromosome | CDS | 628073 | 1035 | - | 0.694686 | |
XCC0524 | helicase | SubName: Full=Helicase; | chromosome | CDS | 632372 | 2904 | + | 0.576446 | |
XCC0533 | ISxcd1 transposase | SubName: Full=IS1477 transposase; SubName: Full=ISxcd1 transposase; | chromosome | CDS | 650057 | 267 | + | 0.629214 | |
XCC0534 | ISxcd1 transposase | SubName: Full=ISxcd1 transposase; | chromosome | CDS | 650356 | 336 | + | 0.675595 | |
XCC0535 | IS1478 transposase | SubName: Full=IS1478 transposase; | chromosome | CDS | 650702 | 1425 | - | 0.633684 | |
XCC0540 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 655007 | 525 | + | 0.681905 | |
XCC0560 | IS1404 transposase | SubName: Full=IS1404 transposase; | chromosome | CDS | 676185 | 987 | - | 0.616008 | |
XCC0561 | IS1404 transposase | SubName: Full=IS1404 transposase; | chromosome | CDS | 677024 | 264 | - | 0.587121 | |
XCC0570 | IS1478 transposase | SubName: Full=IS1478 transposase; | chromosome | CDS | 687637 | 1425 | + | 0.633684 | |
XCC0609 | IS1479 transposase | chromosome | CDS | 733552 | 177 | - | 0.610169 | ||
XCC0610 | ISxcC1 transposase | SubName: Full=ISxcC1 transposase; | chromosome | CDS | 733928 | 768 | - | 0.601562 | |
XCC0611 | ISxcc1 transposase | SubName: Full=ISxcc1 transposase; | chromosome | CDS | 734770 | 267 | - | 0.580524 | |
XCC0612 | ISxcd1 transposase | SubName: Full=ISxcd1 transposase; | chromosome | CDS | 735327 | 123 | - | 0.593496 | |
XCC0638 | IS1478 transposase | SubName: Full=IS1478 transposase; | chromosome | CDS | 762266 | 1368 | - | 0.638889 | |
XCC0710 | conserved hypothetical protein | RecName: Full=UPF0102 protein XCC0710; | chromosome | CDS | 854780 | 369 | - | 0.701897 | |
XCC0838 | MutT-like protein | SubName: Full=MutT-like protein; | chromosome | CDS | 995960 | 660 | - | 0.663636 | |
XCC0993 | conserved hypothetical protein | RecName: Full=3-deoxy-D-manno-octulosonic acid kinase; Short=Kdo kinase; EC=2.7.1.166; | chromosome | CDS | 1145940 | 750 | + | 0.696 | |
XCC1040 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1195408 | 468 | - | 0.645299 | |
XCC1067 | type III restriction-modification enzyme, helicase subunit | SubName: Full=Type III restriction-modification enzyme, helicase subunit; | chromosome | CDS | 1227462 | 3123 | + | 0.582133 | |
XCC1068 | possible DNA methylase | SubName: Full=Possible DNA methylase; | chromosome | CDS | 1230586 | 2919 | + | 0.565605 | |
XCC1069 | putative DNA helicase | SubName: Full=Putative DNA helicase; | chromosome | CDS | 1233504 | 2079 | + | 0.567581 | |
XCC1083 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1250960 | 636 | + | 0.707547 | |
XCC1099 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1276149 | 603 | + | 0.716418 | |
XCC1100 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1276761 | 1419 | + | 0.699084 | |
XCC1131 | DNA-3-methyladenine glycosylase | SubName: Full=DNA-3-methyladenine glycosylase; | chromosome | CDS | 1320013 | 642 | + | 0.679128 | |
XCC1177 | IS1480 transposase | SubName: Full=IS1480 transposase; | chromosome | CDS | 1373511 | 255 | + | 0.552941 | |
XCC1209 | IS1478 transposase | SubName: Full=IS1478 transposase; | chromosome | CDS | 1414467 | 1425 | + | 0.633684 | |
XCC1245 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1450226 | 429 | - | 0.624709 | |
XCC1248 | IS1479 transposase | SubName: Full=IS1479 transposase; | chromosome | CDS | 1454806 | 981 | + | 0.618756 | |
XCC1426 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1658684 | 768 | - | 0.677083 | |
XCC1453 | helicase | SubName: Full=Helicase; | chromosome | CDS | 1692939 | 3198 | + | 0.559725 | |
XCC1454 | IS1478 transposase | SubName: Full=IS1478 transposase; | chromosome | CDS | 1696520 | 1425 | + | 0.633684 | |
XCC1455 | IS1477 transposase | SubName: Full=IS1477 transposase; | chromosome | CDS | 1698035 | 1014 | - | 0.640039 | |
XCC1456 | IS1477 transposase | SubName: Full=IS1477 transposase; SubName: Full=ISxcd1 transposase; | chromosome | CDS | 1698901 | 267 | - | 0.629214 | |
XCC1545 | conserved hypothetical protein | RecName: Full=Ribosomal RNA large subunit methyltransferase K/L; Includes: RecName: Full=23S rRNA m2G2445 methyltransferase; EC=2.1.1.173; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase RlmL; Includes: RecName: Full=23S rRNA m7G2069 methyltransferase; EC=2.1.1.264; AltName: Full=rRNA (guanine-N(7)-)-methyltransferase RlmK; | chromosome | CDS | 1805209 | 2271 | + | 0.677675 | |
XCC1597 | phage-related integrase | SubName: Full=Phage-related integrase; | chromosome | CDS | 1865348 | 1467 | + | 0.603272 | |
XCC1605 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1874953 | 1125 | + | 0.569778 | |
XCC1606 | ISxcc1 transposase | SubName: Full=ISxcc1 transposase; | chromosome | CDS | 1876374 | 267 | + | 0.573034 | |
XCC1607 | ISxcC1 transposase | SubName: Full=ISxcC1 transposase; | chromosome | CDS | 1876715 | 768 | + | 0.582031 | |
XCC1609 | IS1479 transposase | SubName: Full=IS1479 transposase; | chromosome | CDS | 1878689 | 981 | - | 0.619776 | |
XCC1613 | phage-related integrase | SubName: Full=Phage-related integrase; | chromosome | CDS | 1882328 | 1449 | - | 0.592133 | |
XCC1619 | RadC family protein | SubName: Full=RadC family protein; | chromosome | CDS | 1887703 | 480 | + | 0.6375 | |
XCC1627 | IS1477 transposase | SubName: Full=IS1477 transposase; | chromosome | CDS | 1897763 | 267 | + | 0.629214 | |
XCC1628 | IS1477 transposase | SubName: Full=IS1477 transposase; | chromosome | CDS | 1897843 | 1053 | + | 0.641026 | |
XCC1630 | invertase/recombinase protein | SubName: Full=Invertase/recombinase protein; | chromosome | CDS | 1900689 | 567 | - | 0.661376 | |
XCC1633 | ISxac3 transposase | SubName: Full=ISxac3 transposase; | chromosome | CDS | 1902368 | 828 | - | 0.609903 | |
XCC1634 | ISxac3 transposase | SubName: Full=ISxac3 transposase; | chromosome | CDS | 1903240 | 279 | - | 0.616487 | |
XCC1636 | IS1480 transposase | SubName: Full=IS1480 transposase; | chromosome | CDS | 1906915 | 519 | - | 0.566474 | |
XCC1638 | IS1478 transposase | SubName: Full=IS1478 transposase; | chromosome | CDS | 1910557 | 1425 | + | 0.633684 | |
XCC1795 | IS1477 transposase | SubName: Full=IS1477 transposase; | chromosome | CDS | 2093052 | 1053 | - | 0.626781 | |
XCC1796 | IS1477 transposase | SubName: Full=IS1477 transposase; | chromosome | CDS | 2093918 | 267 | - | 0.588015 | |
XCC1823 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2125892 | 552 | + | 0.693841 | |
XCC1976 | ATPase | SubName: Full=ATPase; | chromosome | CDS | 2319852 | 1287 | + | 0.648019 | |
XCC2018 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2367673 | 309 | + | 0.644013 | |
XCC2049 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2419070 | 519 | - | 0.574181 | |
XCC2095 | DNA helicase related protein | SubName: Full=DNA helicase related protein; | chromosome | CDS | 2469862 | 6675 | + | 0.644345 | |
XCC2097 | Tn5041 transposase | SubName: Full=Tn5041 transposase; | chromosome | CDS | 2478711 | 897 | + | 0.567447 | |
XCC2098 | ISxcd1 transposase | SubName: Full=ISxcd1 transposase; | chromosome | CDS | 2478371 | 381 | - | 0.606299 | |
XCC2103 | YeeB-like protein | SubName: Full=YeeB-like protein; | chromosome | CDS | 2485030 | 2100 | - | 0.56 | |
XCC2105 | IS1478 transposase | SubName: Full=IS1478 transposase; | chromosome | CDS | 2488088 | 1368 | - | 0.638889 | |
XCC2107 | IS1595 transposase | SubName: Full=IS1595 transposase; | chromosome | CDS | 2490063 | 963 | + | 0.61163 | |
XCC2316 | 3-methyladenine DNA glycosylase | RecName: Full=Putative 3-methyladenine DNA glycosylase; EC=3.2.2.-; | chromosome | CDS | 2721967 | 624 | + | 0.652244 | |
XCC2392 | conserved hypothetical protein | RecName: Full=Ribosomal RNA small subunit methyltransferase D; EC=2.1.1.171; | chromosome | CDS | 2828282 | 624 | - | 0.733974 | |
XCC2427 | excinuclease ABC subunit C homolog | SubName: Full=Excinuclease ABC subunit C homolog; | chromosome | CDS | 2887144 | 858 | + | 0.645688 | |
XCC2433 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2892736 | 630 | + | 0.68254 | |
XCC2470 | IS1479 transposase | SubName: Full=IS1479 transposase; | chromosome | CDS | 2939079 | 981 | - | 0.620795 | |
XCC2472 | ISD1 transposase | SubName: Full=ISD1 transposase; | chromosome | CDS | 2942234 | 456 | + | 0.559211 | |
XCC2473 | ISD1 transposase | chromosome | CDS | 2943068 | 144 | + | 0.541667 | ||
XCC2490 | IS1478 transposase | SubName: Full=IS1478 transposase; | chromosome | CDS | 2959979 | 1368 | - | 0.638889 | |
XCC2559 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3035597 | 600 | - | 0.603333 | |
XCC2578 | methylated-DNA-protein-cysteine S-methyltransferase related protein | SubName: Full=Methylated-DNA-protein-cysteine S-methyltransferase related protein; | chromosome | CDS | 3062447 | 399 | - | 0.694236 | |
XCC2707 | ISxac3 transposase | SubName: Full=ISxac3 transposase; | chromosome | CDS | 3210982 | 294 | + | 0.612245 | |
XCC2708 | ISxac3 transposase | SubName: Full=ISxac3 transposase; | chromosome | CDS | 3211293 | 855 | + | 0.608187 | |
XCC2709 | IS1479 transposase | SubName: Full=IS1479 transposase; | chromosome | CDS | 3212210 | 981 | + | 0.621814 | |
XCC2747 | conserved hypothetical protein | RecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; | chromosome | CDS | 3258365 | 468 | - | 0.717949 | |
XCC2751 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3261859 | 1275 | + | 0.662745 | |
XCC2786 | replication related protein | SubName: Full=Replication related protein; | chromosome | CDS | 3295305 | 702 | - | 0.696581 | |
XCC2816 | IS1480 transposase | SubName: Full=IS1480 transposase; | chromosome | CDS | 3324586 | 519 | + | 0.572254 | |
XCC2843 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3355331 | 252 | + | 0.670635 | |
XCC2897 | ISxac3 transposase | SubName: Full=ISxac3 transposase; | chromosome | CDS | 3436461 | 828 | - | 0.607488 | |
XCC2898 | ISxac3 transposase | SubName: Full=ISxac3 transposase; | chromosome | CDS | 3437333 | 294 | - | 0.612245 | |
XCC2967 | site-specific DNA-methyltransferase | SubName: Full=Site-specific DNA-methyltransferase; | chromosome | CDS | 3528129 | 705 | - | 0.635461 | |
XCC3007 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3557792 | 276 | + | 0.630435 | |
XCC3072 | conserved hypothetical protein | RecName: Full=UPF0213 protein XCC3072; | chromosome | CDS | 3637565 | 309 | + | 0.682848 | |
XCC3113 | ISxac3 transposase | SubName: Full=ISxac3 transposase; | chromosome | CDS | 3687906 | 279 | + | 0.616487 | |
XCC3114 | degenerated ISxac3 transposase | SubName: Full=Degenerated ISxac3 transposase; | chromosome | CDS | 3688238 | 819 | + | 0.610501 | |
XCC3122 | IS1478 transposase | SubName: Full=IS1478 transposase; | chromosome | CDS | 3698992 | 1368 | - | 0.638889 | |
XCC3123 | ISxcc1 transposase | SubName: Full=ISxcc1 transposase; | chromosome | CDS | 3700520 | 267 | + | 0.580524 | |
XCC3124 | ISxcc1 transposase | SubName: Full=ISxcc1 transposase; | chromosome | CDS | 3700861 | 768 | + | 0.582031 | |
XCC3125 | IS1477 transposase | SubName: Full=IS1477 transposase; | chromosome | CDS | 3701615 | 786 | - | 0.657761 | |
XCC3133 | DNA helicase related protein | SubName: Full=DNA helicase related protein; | chromosome | CDS | 3710567 | 3264 | + | 0.554228 | |
XCC3134 | truncated IS1477 transposase | chromosome | CDS | 3714155 | 267 | + | 0.629214 | ||
XCC3135 | ISxcc1 transposase | SubName: Full=ISxcc1 transposase; | chromosome | CDS | 3714646 | 768 | - | 0.582031 | |
XCC3136 | ISxcc1 transposase | SubName: Full=ISxcc1 transposase; | chromosome | CDS | 3715488 | 267 | - | 0.580524 | |
XCC3137 | truncated IS1477 transposase | SubName: Full=Truncated IS1477 transposase; | chromosome | CDS | 3715776 | 411 | + | 0.618005 | |
XCC3138 | IS1404 transposase | SubName: Full=IS1404 transposase; | chromosome | CDS | 3716225 | 270 | + | 0.581481 | |
XCC3139 | IS1404 transposase | SubName: Full=IS1404 transposase; | chromosome | CDS | 3716308 | 1026 | + | 0.612086 | |
XCC3140 | truncated IS1477 transposase | SubName: Full=Truncated IS1477 transposase; | chromosome | CDS | 3717460 | 237 | + | 0.582278 | |
XCC3158 | aminopeptidase | SubName: Full=Aminopeptidase; | chromosome | CDS | 3738587 | 279 | + | 0.666667 | |
XCC3196 | IS1480 transposase | SubName: Full=IS1480 transposase; | chromosome | CDS | 3797334 | 519 | - | 0.564547 | |
XCC3199 | IS1480 transposase | SubName: Full=IS1480 transposase; | chromosome | CDS | 3800287 | 519 | + | 0.566474 | |
XCC3214 | IS1478 transposase | SubName: Full=IS1478 transposase; | chromosome | CDS | 3816446 | 1635 | - | 0.619572 | |
XCC3217 | IS1404 transposase | SubName: Full=IS1404 transposase; | chromosome | CDS | 3820555 | 264 | + | 0.583333 | |
XCC3218 | IS1404 transposase | SubName: Full=IS1404 transposase; | chromosome | CDS | 3820632 | 1026 | + | 0.612086 | |
XCC3303 | IS1479 transposase | SubName: Full=IS1479 transposase; | chromosome | CDS | 3921716 | 981 | + | 0.619776 | |
XCC3306 | IS1477 transposase | SubName: Full=IS1477 transposase; SubName: Full=ISxcd1 transposase; | chromosome | CDS | 3924103 | 267 | + | 0.629214 | |
XCC3307 | IS1477 transposase | SubName: Full=IS1477 transposase; | chromosome | CDS | 3924183 | 1053 | + | 0.642925 | |
XCC3343 | IS1478 transposase | SubName: Full=IS1478 transposase; | chromosome | CDS | 3977630 | 1368 | - | 0.638889 | |
XCC3443 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4097775 | 1065 | - | 0.709859 | |
XCC3463 | IS1404 transposase | SubName: Full=IS1404 transposase; | chromosome | CDS | 4124553 | 987 | - | 0.612969 | |
XCC3464 | IS1404 transposase | SubName: Full=IS1404 transposase; | chromosome | CDS | 4125392 | 264 | - | 0.587121 | |
XCC3473 | IS1480 transposase | SubName: Full=IS1480 transposase; | chromosome | CDS | 4137739 | 519 | + | 0.564547 | |
XCC3480 | ISxac3 transposase | SubName: Full=ISxac3 transposase; | chromosome | CDS | 4145886 | 828 | - | 0.608696 | |
XCC3481 | ISxac3 transposase | SubName: Full=ISxac3 transposase; | chromosome | CDS | 4146758 | 279 | - | 0.616487 | |
XCC3495 | ISxac3 transposase | SubName: Full=ISxac3 transposase; | chromosome | CDS | 4162579 | 294 | + | 0.615646 | |
XCC3496 | ISxac3 transposase | SubName: Full=ISxac3 transposase; | chromosome | CDS | 4162890 | 855 | + | 0.607018 | |
XCC3527 | endonuclease | SubName: Full=Endonuclease; | chromosome | CDS | 4208940 | 753 | - | 0.625498 | |
XCC3572 | ISxcc1 transposase | SubName: Full=ISxcc1 transposase; | chromosome | CDS | 4259721 | 267 | + | 0.573034 | |
XCC3573 | ISxcc1 transposase | SubName: Full=ISxcc1 transposase; | chromosome | CDS | 4260248 | 582 | + | 0.580756 | |
XCC3575 | IS1404 transposase | SubName: Full=IS1404 transposase; | chromosome | CDS | 4262587 | 264 | + | 0.583333 | |
XCC3576 | IS1404 transposase | SubName: Full=IS1404 transposase; | chromosome | CDS | 4262664 | 1026 | + | 0.61306 | |
XCC3579 | truncated ISxac3 transposase | SubName: Full=Truncated ISxac3 transposase; | chromosome | CDS | 4266279 | 288 | - | 0.625 | |
XCC3580 | IS1477 transposase | SubName: Full=IS1477 transposase; | chromosome | CDS | 4266575 | 1053 | - | 0.641975 | |
XCC3581 | IS1477 transposase | SubName: Full=IS1477 transposase; SubName: Full=ISxcd1 transposase; | chromosome | CDS | 4267441 | 267 | - | 0.629214 | |
XCC3582 | ISxac3 transposase | SubName: Full=ISxac3 transposase; | chromosome | CDS | 4267754 | 582 | - | 0.608247 | |
XCC3583 | ISxac3 transposase | SubName: Full=ISxac3 transposase; | chromosome | CDS | 4268380 | 279 | - | 0.620072 | |
XCC3585 | IS1479 transposase | SubName: Full=IS1479 transposase; | chromosome | CDS | 4270226 | 981 | + | 0.619776 | |
XCC3586 | IS1478 transposase | SubName: Full=IS1478 transposase; | chromosome | CDS | 4271466 | 1368 | - | 0.638889 | |
XCC3602 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4297568 | 504 | - | 0.686508 | |
XCC3626 | RNA-directed DNA polymerase | SubName: Full=RNA-directed DNA polymerase; | chromosome | CDS | 4324395 | 1695 | + | 0.473746 | |
XCC3627 | IS1478 transposase | SubName: Full=IS1478 transposase; | chromosome | CDS | 4326363 | 1368 | + | 0.638889 | |
XCC3664 | DNA polymerase related protein | SubName: Full=DNA polymerase related protein; | chromosome | CDS | 4363529 | 1278 | - | 0.675274 | |
XCC3732 | ISxac3 transposase | SubName: Full=ISxac3 transposase; | chromosome | CDS | 4439870 | 294 | + | 0.615646 | |
XCC3733 | ISxac3 transposase | SubName: Full=ISxac3 transposase; | chromosome | CDS | 4440181 | 855 | + | 0.609357 | |
XCC3776 | ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; | chromosome | CDS | 4487426 | 1722 | - | 0.692799 | |
XCC3871 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4599981 | 540 | + | 0.692593 | |
XCC3881 | DNA polymerase-related protein | SubName: Full=DNA polymerase-related protein; | chromosome | CDS | 4610138 | 660 | + | 0.689394 | |
XCC4098 | conserved hypothetical protein | RecName: Full=Recombination-associated protein RdgC; | chromosome | CDS | 4870562 | 909 | - | 0.633663 | |
XCC4140 | ISxac3 transposase | SubName: Full=ISxac3 transposase; | chromosome | CDS | 4934944 | 273 | + | 0.619048 | |
XCC4141 | ISxac3 transposase | SubName: Full=ISxac3 transposase; | chromosome | CDS | 4935234 | 855 | + | 0.609357 | |
XCC4184 | IS1479 transposase | SubName: Full=IS1479 transposase; | chromosome | CDS | 4991536 | 327 | - | 0.617737 | |
XCC4185 | IS1479 transposase | SubName: Full=IS1479 transposase; | chromosome | CDS | 4991985 | 261 | + | 0.59387 | |
XCC4192 | IS1478 transposase | SubName: Full=IS1478 transposase; | chromosome | CDS | 5001345 | 1368 | - | 0.638889 | |
alkB | DNA repair system specific for alkylated DNA | SubName: Full=DNA repair system specific for alkylated DNA; | chromosome | CDS | 755394 | 606 | + | 0.650165 | |
comEA | DNA transport competence protein | SubName: Full=DNA transport competence protein; | chromosome | CDS | 3291027 | 333 | - | 0.567568 | |
dbpA | ATP-dependent RNA helicase | SubName: Full=ATP-dependent RNA helicase; | chromosome | CDS | 2683748 | 1377 | + | 0.672476 | |
deaD | ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; | chromosome | CDS | 3133068 | 1929 | - | 0.687403 | |
dinG | ATP-dependent helicase | SubName: Full=ATP-dependent helicase; | chromosome | CDS | 4678394 | 2136 | - | 0.674157 | |
dinP | DNA polymerase IV | RecName: Full=DNA polymerase IV; Short=Pol IV; EC=2.7.7.7; | chromosome | CDS | 705301 | 1080 | + | 0.652778 | |
dnaA | chromosomal replication initiator | RecName: Full=Chromosomal replication initiator protein DnaA; | chromosome | CDS | 42 | 1329 | + | 0.659142 | |
dnaB | replicative DNA helicase | SubName: Full=Replicative DNA helicase; | chromosome | CDS | 1668203 | 1431 | + | 0.626136 | |
dnaE1 | DNA polymerase III alpha chain | SubName: Full=DNA polymerase III alpha chain; | chromosome | CDS | 1579471 | 3591 | - | 0.662768 | |
dnaE2 | DNA polymerase III alpha chain | RecName: Full=Error-prone DNA polymerase; EC=2.7.7.7; | chromosome | CDS | 1278532 | 3195 | + | 0.671987 | |
dnaG | DNA primase | RecName: Full=DNA primase; EC=2.7.7.-; | chromosome | CDS | 4539244 | 1749 | + | 0.656947 | |
dnaN | DNA polymerase III beta chain | RecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; | chromosome | CDS | 1646 | 1101 | + | 0.645777 | |
dnaQ | DNA polymerase III epsilon chain | SubName: Full=DNA polymerase III epsilon chain; | chromosome | CDS | 1142346 | 738 | + | 0.650406 | |
dnaX | DNA polymerase III tau and gamma subunits | SubName: Full=DNA polymerase III tau and gamma subunits; | chromosome | CDS | 1150694 | 1962 | + | 0.683486 | |
exo | exodeoxyribonuclease IX | SubName: Full=Exodeoxyribonuclease IX; | chromosome | CDS | 996508 | 999 | - | 0.686687 | |
exoA | exodeoxyribonuclease III | SubName: Full=Exodeoxyribonuclease III; | chromosome | CDS | 4569842 | 801 | - | 0.646692 | |
exoI | succinoglycan biosynthesis protein | SubName: Full=Succinoglycan biosynthesis protein; | chromosome | CDS | 2401312 | 696 | + | 0.652299 | |
fis | DNA-binding protein | RecName: Full=Putative Fis-like DNA-binding protein; | chromosome | CDS | 614868 | 273 | - | 0.626374 | |
gyrA | DNA gyrase subunit A | RecName: Full=DNA gyrase subunit A; EC=5.99.1.3; | chromosome | CDS | 1837968 | 2700 | + | 0.635556 | |
gyrB | DNA gyrase subunit B | RecName: Full=DNA gyrase subunit B; EC=5.99.1.3; | chromosome | CDS | 4853 | 2445 | + | 0.649898 | |
himA | integration host factor alpha chain | RecName: Full=Integration host factor subunit alpha; Short=IHF-alpha; | chromosome | CDS | 2918445 | 300 | - | 0.6 | |
holA | DNA polymerase III delta subunit | SubName: Full=DNA polymerase III delta subunit; | chromosome | CDS | 3104059 | 1029 | - | 0.691934 | |
holB | DNA polymerase III delta' subunit | SubName: Full=DNA polymerase III delta subunit; | chromosome | CDS | 1172706 | 960 | + | 0.695833 | |
holC | DNA polymerase III holoenzyme chi subunit | SubName: Full=DNA polymerase III holoenzyme chi subunit; | chromosome | CDS | 776594 | 426 | - | 0.673709 | |
hrpA | ATP dependent RNA helicase | SubName: Full=ATP dependent RNA helicase; | chromosome | CDS | 3502471 | 4116 | - | 0.679786 | |
hrpB | ATP-dependent RNA helicase | SubName: Full=ATP-dependent RNA helicase; | chromosome | CDS | 337514 | 2511 | - | 0.719634 | |
hup | histone-like protein | SubName: Full=Histone-like protein; | chromosome | CDS | 3269930 | 423 | + | 0.647754 | |
hupB | histone-like protein | SubName: Full=Histone-like protein; | chromosome | CDS | 1135015 | 273 | + | 0.578755 | |
ihfB | integration host factor beta subunit | RecName: Full=Integration host factor subunit beta; Short=IHF-beta; | chromosome | CDS | 2586134 | 312 | - | 0.605769 | |
int | phage-related integrase | SubName: Full=Phage-related integrase; | chromosome | CDS | 1881307 | 996 | - | 0.565261 | |
int | phage-related integrase | SubName: Full=Phage-related integrase; | chromosome | CDS | 465420 | 447 | + | 0.597315 | |
int | integrase | SubName: Full=Integrase; | chromosome | CDS | 4994514 | 225 | + | 0.515556 | |
int | phage-related integrase | SubName: Full=Phage-related integrase; | chromosome | CDS | 3558999 | 1200 | + | 0.5875 | |
int | phage-related integrase | SubName: Full=Phage-related integrase; | chromosome | CDS | 1916589 | 549 | - | 0.615665 | |
intS | phage-related integrase | SubName: Full=Phage-related integrase; | chromosome | CDS | 2494702 | 1938 | - | 0.608875 | |
intS | phage-related integrase | SubName: Full=Phage-related integrase; | chromosome | CDS | 3726461 | 1890 | - | 0.577778 | |
lig1 | DNA ligase | RecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; | chromosome | CDS | 1832376 | 2502 | + | 0.667466 | |
lig2 | DNA ligase | SubName: Full=DNA ligase; | chromosome | CDS | 1507897 | 1605 | - | 0.677259 | |
lig3 | ATP-dependent DNA ligase | SubName: Full=ATP-dependent DNA ligase; | chromosome | CDS | 2712701 | 2550 | - | 0.661176 | |
mfd | transcription-repair coupling factor | RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; | chromosome | CDS | 3196467 | 3468 | + | 0.664648 | |
mttC | type V secretory pathway protein | SubName: Full=Type V secretory pathway protein; | chromosome | CDS | 367077 | 807 | + | 0.66171 | |
mutL | DNA mismatch repair protein | RecName: Full=DNA mismatch repair protein MutL; | chromosome | CDS | 2699842 | 1875 | - | 0.6864 | |
mutM | formamidopyrimidine DNA glycosylase | RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase MutM; Short=AP lyase MutM; EC=4.2.99.18; | chromosome | CDS | 4944183 | 816 | - | 0.628676 | |
mutS | DNA mismatch repair protein | RecName: Full=DNA mismatch repair protein MutS; | chromosome | CDS | 1410066 | 2676 | - | 0.661435 | |
mutT | 7, 8-dihydro-8-oxoguanine-triphosphatase | SubName: Full=7, 8-dihydro-8-oxoguanine-triphosphatase; | chromosome | CDS | 2551171 | 489 | - | 0.650307 | |
mutT | 7, 8-dihydro-8-oxoguanine-triphosphatase | SubName: Full=7, 8-dihydro-8-oxoguanine-triphosphatase; | chromosome | CDS | 2302636 | 459 | - | 0.675381 | |
mutY | A/G-specific adenine glycosylase | SubName: Full=A/G-specific adenine glycosylase; | chromosome | CDS | 2877069 | 1071 | + | 0.6676 | |
nfi | endonuclease V | RecName: Full=Endonuclease V; EC=3.1.21.7; AltName: Full=Deoxyinosine 3endonuclease; AltName: Full=Deoxyribonuclease V; Short=DNase V; | chromosome | CDS | 3217012 | 711 | + | 0.696203 | |
nth | endonuclease III | RecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; | chromosome | CDS | 1794385 | 684 | - | 0.638889 | |
nudC | NADH pyrophosphatase | SubName: Full=NADH pyrophosphatase; | chromosome | CDS | 587541 | 900 | + | 0.681111 | |
nudE | ADP compounds hydrolase | SubName: Full=ADP compounds hydrolase; | chromosome | CDS | 3409438 | 558 | - | 0.668459 | |
nudH | (di)nucleoside polyphosphate hydrolase | RecName: Full=RNA pyrophosphohydrolase; EC=3.6.1.-; AltName: Full=(Di)nucleoside polyphosphate hydrolase; | chromosome | CDS | 578847 | 618 | + | 0.63754 | |
ogt | 6-O-methylguanine-DNA methyltransferase | RecName: Full=Methylated-DNA--protein-cysteine methyltransferase; EC=2.1.1.63; AltName: Full=6-O-methylguanine-DNA methyltransferase; AltName: Full=O-6-methylguanine-DNA-alkyltransferase; | chromosome | CDS | 3142768 | 543 | + | 0.694291 | |
orf35 | phage-related integrase | SubName: Full=Phage-related integrase; | chromosome | CDS | 1702007 | 1017 | + | 0.577188 | |
orf37 | phage-related protein | SubName: Full=Phage-related protein; | chromosome | CDS | 3553413 | 2664 | + | 0.620495 | |
parC | topoisomerase IV subunit A | RecName: Full=DNA topoisomerase 4 subunit A; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit A; | chromosome | CDS | 1624771 | 2244 | - | 0.653743 | |
parE | topoisomerase IV subunit B | RecName: Full=DNA topoisomerase 4 subunit B; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit B; | chromosome | CDS | 1971931 | 1905 | - | 0.647244 | |
phr | photolyase-like protein | SubName: Full=Photolyase-like protein; | chromosome | CDS | 1669888 | 1455 | + | 0.670103 | |
polA | DNA polymerase I | SubName: Full=DNA polymerase I; | chromosome | CDS | 4765994 | 2784 | - | 0.687859 | |
priA | primosomal protein N' | SubName: Full=Primosomal protein N; | chromosome | CDS | 4475965 | 2223 | + | 0.721997 | |
radC | DNA repair protein | RecName: Full=UPF0758 protein XCC3860; | chromosome | CDS | 4582388 | 678 | + | 0.716814 | |
recA | RecA protein | RecName: Full=Protein RecA; AltName: Full=Recombinase A; | chromosome | CDS | 2000077 | 1032 | + | 0.636628 | |
recB | exodeoxyribonuclease V beta chain | SubName: Full=Exodeoxyribonuclease V beta chain; | chromosome | CDS | 5009047 | 4119 | - | 0.714251 | |
recC | exodeoxyribonuclease V gamma chain | SubName: Full=Exodeoxyribonuclease V gamma chain; | chromosome | CDS | 5013162 | 3405 | - | 0.712775 | |
recD | exodeoxyribonuclease V alpha chain | SubName: Full=Exodeoxyribonuclease V alpha chain; | chromosome | CDS | 5006813 | 2238 | - | 0.714477 | |
recF | DNA replication and repair RecF protein | RecName: Full=DNA replication and repair protein RecF; | chromosome | CDS | 3633 | 1107 | + | 0.654923 | |
recG | ATP-dependent DNA helicase | SubName: Full=ATP-dependent DNA helicase; | chromosome | CDS | 3846693 | 2142 | - | 0.693744 | |
recJ | putative single stranded DNA exonuclease | SubName: Full=Putative single stranded DNA exonuclease; | chromosome | CDS | 2148633 | 1740 | + | 0.686207 | |
recN | recombination protein N | RecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; | chromosome | CDS | 1717194 | 1665 | - | 0.702102 | |
recO | DNA repair protein | RecName: Full=DNA repair protein RecO; AltName: Full=Recombination protein O; | chromosome | CDS | 1492246 | 726 | + | 0.690083 | |
recQ | DNA helicase | SubName: Full=DNA helicase; | chromosome | CDS | 3507580 | 1803 | + | 0.674986 | |
recR | recombination protein RecR | RecName: Full=Recombination protein RecR; | chromosome | CDS | 1153079 | 594 | + | 0.671717 | |
rep | ATP-dependent DNA helicase | SubName: Full=ATP-dependent DNA helicase; | chromosome | CDS | 4932357 | 1977 | - | 0.647446 | |
rhlE | ATP-dependent RNA helicase | SubName: Full=ATP-dependent RNA helicase; | chromosome | CDS | 517880 | 1293 | - | 0.694509 | |
rhlE | ATP-dependent RNA helicase | SubName: Full=ATP-dependent RNA helicase; | chromosome | CDS | 710483 | 1389 | - | 0.688985 | |
rnhA | ribonuclease H | RecName: Full=Ribonuclease H; Short=RNase H; EC=3.1.26.4; | chromosome | CDS | 1141885 | 453 | + | 0.657837 | |
rnhB | ribonuclease HII | RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; | chromosome | CDS | 1583298 | 723 | - | 0.692946 | |
rnt | ribonuclease T | RecName: Full=Ribonuclease T; EC=3.1.13.-; AltName: Full=Exoribonuclease T; Short=RNase T; | chromosome | CDS | 1782465 | 651 | - | 0.658986 | |
ruvA | holliday junction binding protein, DNA helicase | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; | chromosome | CDS | 3572231 | 585 | - | 0.690598 | |
ruvB | holliday junction binding protein, DNA helicase | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; | chromosome | CDS | 3567920 | 1041 | - | 0.673391 | |
ruvC | holliday junction resolvase, endodeoxyribonuclease | RecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; | chromosome | CDS | 3572928 | 525 | - | 0.674286 | |
sbcB | exodeoxyribonuclease I | RecName: Full=Exodeoxyribonuclease I; EC=3.1.11.1; | chromosome | CDS | 1811778 | 1446 | - | 0.661134 | |
smf | DNA processing chain A | SubName: Full=DNA processing chain A; | chromosome | CDS | 4459157 | 1137 | + | 0.703606 | |
ssb | single-stranded DNA binding protein | RecName: Full=Single-stranded DNA-binding protein; Short=SSB; | chromosome | CDS | 3244604 | 519 | - | 0.660886 | |
tag | DNA-3-methyladenine glycosylase I | SubName: Full=DNA-3-methyladenine glycosylase I; | chromosome | CDS | 3261323 | 540 | + | 0.627778 | |
topA | DNA topoisomerase I | RecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; | chromosome | CDS | 4462944 | 2496 | + | 0.635817 | |
umuC | polymerase V subunit | SubName: Full=Polymerase V subunit; | chromosome | CDS | 3524399 | 1287 | + | 0.655012 | |
ung | uracil-DNA glycosylase | RecName: Full=Uracil-DNA glycosylase; Short=UDG; EC=3.2.2.27; | chromosome | CDS | 4484144 | 726 | - | 0.668044 | |
uvrA1 | excinuclease ABC subunit A | RecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; | chromosome | CDS | 1334657 | 2967 | - | 0.640377 | |
uvrA2 | excinuclease ABC subunit A | SubName: Full=Excinuclease ABC subunit A; | chromosome | CDS | 1255669 | 2586 | + | 0.67208 | |
uvrB | excinuclease ABC subunit B | RecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; | chromosome | CDS | 2954983 | 2022 | - | 0.628091 | |
uvrC | excinuclease ABC subunit C | RecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; | chromosome | CDS | 2497905 | 1857 | - | 0.662897 | |
uvrD | DNA helicase II | SubName: Full=DNA helicase II; | chromosome | CDS | 4772627 | 2187 | - | 0.659808 | |
wxcB | kinase | SubName: Full=Kinase; | chromosome | CDS | 724009 | 2295 | + | 0.571678 | |
xerC | site-specific recombinase | RecName: Full=Tyrosine recombinase XerC; | chromosome | CDS | 4164143 | 969 | - | 0.664603 | |
xerD | integrase/recombinase | RecName: Full=Tyrosine recombinase XerD; | chromosome | CDS | 782003 | 972 | + | 0.703704 | |
xseA | exodeoxyribonuclease VII large subunit | RecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit; | chromosome | CDS | 2706806 | 1341 | + | 0.697987 | |
xseB | exodeoxyribonuclease VII small subunit | RecName: Full=Exodeoxyribonuclease 7 small subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit; | chromosome | CDS | 3083988 | 264 | + | 0.636364 | |
xthA1 | exodeoxyribonuclease III | SubName: Full=Exodeoxyribonuclease III; | chromosome | CDS | 4798378 | 780 | - | 0.669231 | |
xthA2 | exodeoxyribonuclease III | SubName: Full=Exodeoxyribonuclease III; | chromosome | CDS | 2345666 | 1071 | + | 0.640523 | |
yoaA | ATP-dependent helicase | SubName: Full=ATP-dependent helicase; | chromosome | CDS | 3480746 | 2007 | - | 0.67713 |