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2024-04-29 16:32:44

Gene list

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COG category: Replication, recombination and repair
Organism: Thermoanaerobacter tengcongensis MB4, MB4

Number of genes found: 184

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Thermoanaerobacter tengcongensis MB4, MB4
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA TTE0414 transposasechromosome CDS430886 1284 + 0.36215
NA TTE2632 conserved hypothetical proteinchromosome CDS2524444 408 - 0.360294
NA TTE1685 MutS-like ATPases involved in mismatch repair, family 1chromosome CDS1633388 2373 - 0.386431
NA TTE0153 transposasechromosome CDS148742 1284 + 0.338785
NA TTE2667 conserved hypothetical proteinchromosome CDS2565128 756 - 0.328042
NA TTE0163 hypothetical proteinchromosome CDS159713 1437 + 0.347251
NA TTE1114 predicted site-specific integrase-resolvasechromosome CDS1116695 594 + 0.3367
NA TTE1282 hypothetical proteinchromosome CDS1277419 477 + 0.429769
NA TTE1837 hypothetical proteinchromosome CDS1787351 171 - 0.397661
NA TTE0587 hypothetical proteinchromosome CDS589087 1461 + 0.353183
NA TTE1944 conserved hypothetical proteinchromosome CDS1890463 1452 - 0.34022
NA TTE1452 predicted endonuclease distantly related to archaeal Holliday junction resolvasechromosome CDS1427053 369 + 0.338753
NA TTE0235 transposasechromosome CDS240088 1284 + 0.360592
NA TTE1810 hypothetical proteinchromosome CDS1756295 903 - 0.333333
NA TTE2218 transposasechromosome CDS2126269 1368 - 0.414474
NA TTE2007 hypothetical proteinchromosome CDS1956314 561 - 0.376114
NA TTE0853 transposasechromosome CDS861916 1332 - 0.36036
NA TTE0333 transposasechromosome CDS352961 1284 + 0.36215
NA TTE1962 hypothetical proteinchromosome CDS1907104 1452 - 0.34573
NA TTE0586 predicted site-specific integrase-resolvasechromosome CDS588537 594 + 0.333333
NA TTE2378 germination proteinchromosome CDS2266428 1200 - 0.3825
NA TTE2604 transposasechromosome CDS2490198 1698 + 0.341578
NA TTE2242 transposasechromosome CDS2144657 1227 + 0.343113
NA TTE2359 transposasechromosome CDS2250876 1368 + 0.410819
NA TTE0422 transposasechromosome CDS438594 1404 - 0.408832
NA TTE0715 predicted transposasechromosome CDS716265 1197 + 0.316625
NA TTE2638 transposasechromosome CDS2531729 1284 - 0.36215
NA TTE1170 transposasechromosome CDS1169044 1284 + 0.36215
NA TTE2027 antirestriction proteinchromosome CDS1973105 852 - 0.368545
NA TTE0013 transposasechromosome CDS15687 1284 - 0.36215
NA TTE1054 transposasechromosome CDS1057112 1284 + 0.36215
NA TTE1994 hypothetical proteinchromosome CDS1942483 1500 - 0.337333
NA TTE0357 transposasechromosome CDS382720 1284 + 0.36215
NA TTE2635 predicted nucleic acid-binding protein, contains PIN domainchromosome CDS2527058 921 - 0.305103
NA TTE0507 hypothetical proteinchromosome CDS517440 471 + 0.299363
NA TTE2428 SEC-C motifchromosome CDS2319060 1323 + 0.291005
NA TTE1083 conserved hypothetical proteinchromosome CDS1087226 1509 - 0.32273
NA TTE2631 conserved hypothetical proteinchromosome CDS2523470 978 - 0.341513
NA TTE1156 Integrase core domainchromosome CDS1157624 1044 + 0.394636
NA TTE1566 hypothetical proteinchromosome CDS1524848 582 - 0.343643
NA TTE0162 Orf in partial transposonchromosome CDS159467 189 + 0.338624
NA TTE1670 predicted site-specific integrase-resolvasechromosome CDS1618667 408 - 0.308824
NA TTE1745 Reverse gyrasechromosome CDS1688642 3354 + 0.364937
NA TTE0571 hypothetical proteinchromosome CDS573256 1437 + 0.345859
NA TTE0401 transposasechromosome CDS419632 1476 - 0.345528
NA TTE1226 transposasechromosome CDS1226374 1368 - 0.410819
NA TTE2016 transposasechromosome CDS1967576 1284 - 0.36215
NA TTE2692 conserved hypothetical proteinchromosome CDS2587869 975 + 0.389744
NA TTE1152 transposasechromosome CDS1152837 1368 + 0.410819
NA TTE1412 conserved hypothetical proteinchromosome CDS1392809 1365 - 0.404396
NA TTE2633 conserved hypothetical proteinchromosome CDS2524876 1050 - 0.349524
NA TTE0741 predicted site-specific integrase-resolvasechromosome CDS742124 591 + 0.335025
NA TTE2646 transposasechromosome CDS2538790 1668 - 0.351319
NA TTE2355 hypothetical proteinchromosome CDS2244975 1365 - 0.292308
NA TTE0077 Uracil-DNA glycosylasechromosome CDS82998 561 + 0.383244
NA TTE2162 predicted site-specific integrase-resolvasechromosome CDS2082655 351 - 0.31339
NA TTE0347 transposasechromosome CDS370739 1284 + 0.36215
NA TTE0390 hypothetical proteinchromosome CDS413496 606 + 0.250825
NA TTE0865 transposasechromosome CDS873162 1506 + 0.344622
NA TTE1250 predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)chromosome CDS1251270 420 + 0.385714
NA TTE1046 transposasechromosome CDS1050506 1284 + 0.338006
NA TTE0312 transposasechromosome CDS326330 1284 + 0.337227
NA TTE1107 conserved hypothetical proteinchromosome CDS1108014 1437 + 0.345164
NA TTE2433 hypothetical proteinchromosome CDS2324636 477 - 0.345912
NA TTE0691 predicted site-specific integrase-resolvasechromosome CDS695978 594 + 0.333333
NA TTE2500 hypothetical proteinchromosome CDS2390274 195 + 0.307692
NA TTE1171 transposasechromosome CDS1171041 1284 + 0.338785
NA TTE1675 transposasechromosome CDS1623042 1284 - 0.36215
NA TTE2408 transposasechromosome CDS2297777 1698 - 0.3404
NA TTE0670 transposasechromosome CDS672665 1104 + 0.423913
NA TTE0528 hypothetical proteinchromosome CDS534503 1437 + 0.345164
NA TTE2657 conserved hypothetical proteinchromosome CDS2555595 264 - 0.352273
NA TTE0846 transposasechromosome CDS854172 1479 + 0.342799
NA TTE0742 hypothetical proteinchromosome CDS742695 1437 + 0.340988
NA TTE1227 transposasechromosome CDS1227928 1284 + 0.364486
NA TTE0705 predicted site-specific integrase-resolvasechromosome CDS710830 594 + 0.329966
NA TTE1104 transposasechromosome CDS1105836 1218 + 0.399015
NA TTE1714 hypothetical proteinchromosome CDS1666097 1437 - 0.345859
NA TTE0280 hypothetical proteinchromosome CDS292066 522 - 0.316092
NA TTE1784 uncharacterized ATPase related to the helicase subunit of the Holliday junction resolvasechromosome CDS1731507 1323 - 0.402116
NA TTE1436 hypothetical proteinchromosome CDS1411962 1212 - 0.341584
NA TTE1487 N6-adenine-specific methylasechromosome CDS1456011 570 - 0.377193
NA TTE0263 ATP-dependent nucleasechromosome CDS267721 3480 + 0.36954
NA TTE2662 conserved hypothetical proteinchromosome CDS2560444 972 - 0.440329
NA TTE0714 predicted site-specific integrase-resolvasechromosome CDS715631 678 + 0.284661
NA TTE2528 predicted transposasechromosome CDS2419454 804 - 0.317164
NA TTE0527 predicted site-specific integrase-resolvasechromosome CDS533932 591 + 0.333333
NA TTE1124 transposasechromosome CDS1124622 1698 - 0.341578
NA TTE1669 hypothetical proteinchromosome CDS1617250 1437 - 0.34238
NA TTE0239 transposasechromosome CDS244019 1284 + 0.338785
NA TTE2664 conserved hypothetical proteinchromosome CDS2562915 783 - 0.403576
NA TTE1193 hypothetical proteinchromosome CDS1191717 1437 + 0.343772
NA TTE1151 transposasechromosome CDS1151367 1284 - 0.36215
NA TTE0684 hypothetical proteinchromosome CDS686191 1437 + 0.3389
NA TTE1030 transposasechromosome CDS1034898 1284 - 0.362928
NA TTE1173 hypothetical proteinchromosome CDS1173220 1377 + 0.293391
NA TTE1786 transposasechromosome CDS1733573 1275 - 0.338039
NA TTE1379 transposasechromosome CDS1363052 1524 - 0.341864
NA TTE2490 transposasechromosome CDS2378779 1368 + 0.410819
NA TTE0027 transposasechromosome CDS31806 1368 + 0.410819
NA TTE2636 conserved hypothetical proteinchromosome CDS2528002 1434 - 0.301255
NA TTE2634 hypothetical proteinchromosome CDS2525918 1134 - 0.344797
NA TTE0071 hypothetical proteinchromosome CDS78650 1437 + 0.339596
NA TTE2659 RecB family exonucleasechromosome CDS2556951 513 - 0.37232
NA TTE1516 hypothetical proteinchromosome CDS1480625 540 - 0.351852
NA TTE1723 hypothetical proteinchromosome CDS1674022 480 + 0.364583
NA TTE2658 conserved hypothetical proteinchromosome CDS2555923 993 - 0.34139
NA TTE0683 predicted site-specific integrase-resolvasechromosome CDS685617 594 + 0.340067
NA TTE0515 transposasechromosome CDS522012 1500 - 0.347333
NA TTE2637 transposasechromosome CDS2529621 1368 + 0.410819
NA TTE0944 transposasechromosome CDS946293 1284 + 0.36215
NA TTE1984 hypothetical proteinchromosome CDS1933726 1437 - 0.339596
Ada TTE2519 Methylated DNA-protein cysteine methyltransferasechromosome CDS2409232 540 - 0.366667
AlkA TTE0574 3-Methyladenine DNA glycosylasechromosome CDS575165 894 + 0.383669
ComEA TTE0926 DNA uptake protein and related DNA-binding proteinschromosome CDS931752 591 + 0.379019
DinP TTE0254 Nucleotidyltransferase/DNA polymerase involved in DNA repairchromosome CDS257528 1155 + 0.362771
DnaA TTE0001 ATPase involved in DNA replication initiationchromosome CDS365 1332 + 0.363363
DnaB TTE2774 Replicative DNA helicasechromosome CDS2665531 1335 - 0.403745
DnaC TTE2693 DNA replication proteinchromosome CDS2588836 984 + 0.353659
DnaE TTE1818 DNA polymerase III alpha subunitchromosome CDS1765965 3447 - 0.403539
DnaG TTE1756 DNA primase (bacterial type)chromosome CDS1702662 1803 - 0.354964
DnaG2 TTE2018 DNA primase (bacterial type)chromosome CDS1969474 1077 - 0.406685
DnaN TTE0002 DNA polymerase III beta subunitchromosome CDS1934 1113 + 0.377358
DnaX TTE0039 DNA polymerase III, gamma/tau subunitschromosome CDS48666 1557 + 0.379576
GyrA TTE0011 DNA gyrase (topoisomerase II) A subunitchromosome CDS11704 2424 + 0.380776
GyrB TTE0010 DNA gyrase (topoisomerase II) B subunitchromosome CDS9726 1965 + 0.394402
HimA TTE2453 Bacterial nucleoid DNA-binding proteinchromosome CDS2340783 276 - 0.423913
HolA TTE0942 DNA polymerase III delta subunitchromosome CDS944719 1017 + 0.374631
HolB TTE0097 ATPase involved in DNA replicationchromosome CDS98846 963 + 0.333333
Lig TTE0605 NAD-dependent DNA ligase (contains BRCT domain type II)chromosome CDS607685 2001 + 0.42029
Mfd TTE2565 Transcription-repair coupling factor-superfamily II helicasechromosome CDS2452657 3510 - 0.408547
MutL TTE1358 DNA mismatch repair enzyme (predicted ATPase)chromosome CDS1340943 1773 + 0.370558
MutS TTE0725 MutS-like ATPases involved in mismatch repair, family 2chromosome CDS727145 1503 + 0.341317
MutS2 TTE1357 MutS-like ATPases involved in mismatch repair, family 2chromosome CDS1338337 2610 + 0.364751
MutS3 TTE1906 MutS-like ATPases involved in mismatch repair, family 2chromosome CDS1843288 1425 - 0.319298
MutT TTE1129 NTP pyrophosphohydrolases including oxidative damage repair enzymeschromosome CDS1133199 429 + 0.410256
MutT2 TTE1310 NTP pyrophosphohydrolases including oxidative damage repair enzymeschromosome CDS1301252 543 + 0.372007
MutT3 TTE2249 NTP pyrophosphohydrolases including oxidative damage repair enzymeschromosome CDS2150539 429 - 0.342657
MutT4 TTE2793 NTP pyrophosphohydrolases including oxidative damage repair enzymeschromosome CDS2682406 447 - 0.389262
Nfo TTE1276 Endonuclease IVchromosome CDS1272032 867 + 0.403691
Nth TTE1769 predicted EndoIII-related endonucleasechromosome CDS1716324 642 - 0.380062
PolA TTE0874 DNA polymerase I-3'-5' exonuclease and polymerase domainschromosome CDS882689 2616 + 0.377294
PolC TTE1398 DNA polymerase III alpha subunit, the Gram-positive typechromosome CDS1379781 4206 - 0.396101
PriA TTE1508 Primosomal protein N (replication factor Y)-superfamily II helicasechromosome CDS1473051 2199 - 0.386994
RadC TTE0897 DNA repair proteinschromosome CDS906139 702 + 0.380342
RecA TTE1374 RecA/RadA recombinasechromosome CDS1356795 924 - 0.411255
RecB TTE0264 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)chromosome CDS271148 3615 + 0.382573
RecD TTE0489 ATP-dependent exoDNAse (exonuclease V), alpha subunit-helicase superfamily I memberchromosome CDS501695 2298 + 0.397302
RecD2 TTE2109 ATP-dependent exoDNAse (exonuclease V), alpha subunit-helicase superfamily I memberchromosome CDS2030600 2172 - 0.390424
RecF TTE0004 Recombinational DNA repair ATPasechromosome CDS3277 1095 + 0.338813
RecG TTE1492 RecG-like helicasechromosome CDS1458346 2049 - 0.390922
RecJ TTE1191 Single-stranded DNA-specific exonucleasechromosome CDS1188659 2463 + 0.349574
RecJ2 TTE2108 Single-stranded DNA-specific exonucleasechromosome CDS2029141 1476 - 0.382114
RecN TTE1302 ATPases involved in DNA repairchromosome CDS1292393 1701 + 0.343915
RecO TTE0976 Recombinational DNA repair proteinchromosome CDS978217 774 + 0.346253
RecR TTE0041 Recombinational DNA repair proteinchromosome CDS50628 600 + 0.39
RnhA TTE1362 Ribonuclease HIchromosome CDS1344849 462 + 0.367965
RnhB TTE1451 Ribonuclease HIIchromosome CDS1426331 726 + 0.373278
RuvA TTE1179 Holliday junction resolvasome DNA-binding subunitchromosome CDS1177702 564 + 0.397163
RuvB TTE1180 Holliday junction resolvasome helicase subunitchromosome CDS1178276 1017 + 0.396264
RuvC TTE1178 Holliday junction resolvasome endonuclease subunitchromosome CDS1177208 498 + 0.427711
SbcC TTE0266 ATPase involved in DNA repairchromosome CDS275972 3534 + 0.365874
SbcC2 TTE2031 ATPase involved in DNA repairchromosome CDS1975037 1650 - 0.340606
SbcD TTE0265 DNA repair exonucleasechromosome CDS274773 1203 + 0.412303
Smf TTE1450 predicted Rossmann-fold nucleotide-binding protein involved in DNA uptakechromosome CDS1425140 1089 - 0.391185
SplB TTE2677 DNA repair photolyasechromosome CDS2573613 1005 - 0.352239
Ssb TTE0829 Single-stranded DNA-binding proteinchromosome CDS836505 651 + 0.403994
Ssb2 TTE2053 Single-stranded DNA-binding proteinchromosome CDS1990101 462 - 0.406926
Ssb3 TTE2780 Single-stranded DNA-binding proteinchromosome CDS2670877 453 - 0.448124
Tag TTE0091 3-Methyladenine DNA glycosylasechromosome CDS95100 567 + 0.363316
TatD TTE0111 Mg-dependent DNasechromosome CDS113540 771 + 0.368353
TopA TTE1449 Topoisomerase IAchromosome CDS1423005 2085 - 0.398082
Tra8 TTE0737 transposase, IS30 familychromosome CDS739538 1044 + 0.314176
Tra8 TTE0879 transposase, IS30 familychromosome CDS889497 1044 + 0.314176
UvrA TTE1970 Excinuclease ATPase subunitchromosome CDS1916459 2784 - 0.435345
UvrB TTE1971 Helicase subunit of the DNA excision repair complexchromosome CDS1919249 1989 - 0.425339
UvrC TTE1966 Nuclease subunit of the excinuclease complexchromosome CDS1911537 1854 - 0.406149
UvrD TTE0604 Superfamily I DNA and RNA helicaseschromosome CDS605527 2142 + 0.369748
XerC TTE1313 Integrasechromosome CDS1303737 873 + 0.358534
XerC2 TTE1363 Integrasechromosome CDS1345336 1062 + 0.354049
XerC3 TTE2127 Integrasechromosome CDS2041737 1176 + 0.321429
XseA TTE1294 Exonuclease VII large subunitchromosome CDS1284735 1215 + 0.396708
XseB TTE1295 Exonuclease VII small subunitchromosome CDS1285933 228 + 0.307018
XthA TTE2226 Exonuclease IIIchromosome CDS2132658 777 + 0.384813