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2024-05-04 05:24:11

Gene list

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COG category: Replication, recombination and repair
Organism: Deinococcus radiodurans, R1

Number of genes found: 157

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Deinococcus radiodurans, R1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
DR0001 DNA polymerase III, beta subunitchromosome 1 CDS1 1182 - 0.637902
DR0002 chromosomal replication initiator proteinchromosome 1 CDS1904 1365 - 0.644689
DR0004 MutT/nudix family proteinchromosome 1 CDS4378 1053 + 0.679012
DR0079 MutT/nudix family proteinchromosome 1 CDS80122 516 - 0.647287
DR0092 MutT/nudix family proteinchromosome 1 CDS92880 276 - 0.699275
DR0099 single-stranded DNA-binding proteinchromosome 1 CDS100371 432 + 0.601852
DR0120 smf proteinchromosome 1 CDS118232 1113 - 0.725067
DR0131 hypothetical proteinchromosome 1 CDS129577 1653 - 0.719903
DR0144 transposase, putativechromosome 1 CDS142588 984 - 0.577236
DR0146 conserved hypothetical proteinchromosome 1 CDS145257 789 + 0.680608
DR0149 MutT/nudix family proteinchromosome 1 CDS149932 612 - 0.648693
DR0177 transposase, putativechromosome 1 CDS178048 396 + 0.580808
DR0178 transposase, putativechromosome 1 CDS178430 1230 + 0.599187
DR0186 exodeoxyribonuclease VII large subunit, putativechromosome 1 CDS189531 1251 + 0.726619
DR0198 recR proteinchromosome 1 CDS202133 663 - 0.68175
DR0274 MutT/nudix family proteinchromosome 1 CDS276905 537 + 0.72067
DR0289 endonuclease IIIchromosome 1 CDS291364 678 + 0.688791
DR0329 MutT/nudix family proteinchromosome 1 CDS323396 972 - 0.704733
DR0335 ATP-dependent RNA helicase, putativechromosome 1 CDS331099 1437 + 0.718163
DR0354 exodeoxyribonuclease IIIchromosome 1 CDS355939 852 - 0.678404
DR0420 ATP-dependent helicasechromosome 1 CDS418978 2469 + 0.717699
DR0428 conserved hypothetical proteinchromosome 1 CDS426965 420 + 0.67619
DR0440 Holliday junction resolvasechromosome 1 CDS436818 540 + 0.690741
DR0467 conserved hypothetical proteinchromosome 1 CDS467498 1719 - 0.705643
DR0493 formamidopyrimidine-DNA glycosylasechromosome 1 CDS493975 876 + 0.679224
DR0507 DNA polymerase III, alpha subunitchromosome 1 CDS509476 4008 - 0.646457
DR0513 integrase, putativechromosome 1 CDS518499 1335 - 0.722097
DR0534 serine/threonine protein kinase-related proteinchromosome 1 CDS536164 2103 - 0.600571
DR0549 replicative DNA helicasechromosome 1 CDS554038 1347 + 0.628805
DR0596 Holliday junction DNA helicasechromosome 1 CDS608448 1002 - 0.667665
DR0601 DNA primasechromosome 1 CDS612425 1716 + 0.66958
DR0643 N-6 adenine-specific DNA restriction methylase, putativechromosome 1 CDS655597 561 - 0.71836
DR0666 transposase, putativechromosome 1 CDS674933 1227 - 0.524042
DR0667 transposase, putativechromosome 1 CDS676146 423 - 0.520095
DR0689 uracil-DNA N-glycosylasechromosome 1 CDS705155 744 + 0.634409
DR0690 type I topoisomerase, putativechromosome 1 CDS705915 1041 + 0.678194
DR0715 G/U mismatch-specific DNA glycosylasechromosome 1 CDS732946 600 - 0.713333
DR0746 hypothetical proteinchromosome 1 CDS762833 240 + 0.6875
DR0783 MutT/nudix family proteinchromosome 1 CDS798414 468 + 0.645299
DR0784 MutT/nudix family proteinchromosome 1 CDS798934 468 + 0.619658
DR0819 hypothetical proteinchromosome 1 CDS832077 735 + 0.706122
DR0856 DNA polymerase III, epsilon subunit, putativechromosome 1 CDS867308 594 - 0.686869
DR0870 transposase, putativechromosome 1 CDS881473 1251 - 0.583533
DR0876 hypothetical proteinchromosome 1 CDS888868 474 - 0.649789
DR0899 ribonuclease Hchromosome 1 CDS907071 540 + 0.635185
DR0906 DNA gyrase, subunit Bchromosome 1 CDS912217 1992 + 0.629016
DR0928 endonuclease III, putativechromosome 1 CDS942508 1017 + 0.656834
DR0978 transposase, putativechromosome 1 CDS994760 1227 - 0.524042
DR0979 transposase, putativechromosome 1 CDS995973 423 - 0.520095
DR1007 MutT/nudix family proteinchromosome 1 CDS1019945 501 + 0.658683
DR1018 hypothetical proteinchromosome 1 CDS1030452 1197 + 0.703425
DR1025 MutT/nudix family proteinchromosome 1 CDS1038101 480 + 0.641667
DR1089 recF proteinchromosome 1 CDS1096951 1080 - 0.692593
DR1126 single-stranded-DNA-specific exonuclease, putativechromosome 1 CDS1134718 2055 + 0.679319
DR1143 hypothetical proteinchromosome 1 CDS1152328 711 - 0.682138
DR1168 MutT/nudix family proteinchromosome 1 CDS1176525 843 - 0.657177
DR1184 MutT/nudix family proteinchromosome 1 CDS1192879 585 + 0.707692
DR1196 transposase, putativechromosome 1 CDS1204787 867 - 0.568627
DR1213 serine/threonine protein kinase, putativechromosome 1 CDS1220917 1053 + 0.68661
DR1243 serine/threonine protein kinase, putativechromosome 1 CDS1249642 837 + 0.689367
DR1244 conserved hypothetical proteinchromosome 1 CDS1250478 903 + 0.692137
DR1258 SNF2/Rad54 helicase-related proteinchromosome 1 CDS1262806 2751 + 0.70847
DR1259 DNA helicase, SNF2/RAD54 familychromosome 1 CDS1265444 1803 + 0.663894
DR1274 Holliday junction binding proteinchromosome 1 CDS1280889 606 - 0.712871
DR1284 hypothetical proteinchromosome 1 CDS1291027 420 + 0.614286
DR1285 transposase, putativechromosome 1 CDS1291465 708 + 0.60452
DR1289 DNA helicase RecQchromosome 1 CDS1293434 2475 - 0.683636
DR1296 transposase, putativechromosome 1 CDS1302793 813 + 0.554736
DR1334 transposase, putativechromosome 1 CDS1337911 1251 - 0.583533
DR1354 excinuclease ABC, subunit Cchromosome 1 CDS1360069 1854 + 0.6726
DR1381 transposase, putativechromosome 1 CDS1387645 1227 - 0.524042
DR1382 transposase, putativechromosome 1 CDS1388858 423 - 0.520095
DR1455 conserved hypothetical proteinchromosome 1 CDS1457794 297 - 0.619529
DR1477 DNA repair proteinchromosome 1 CDS1490126 1695 + 0.702065
DR1532 transcription-repair coupling factorchromosome 1 CDS1546521 3165 - 0.66793
DR1592 transposase, putativechromosome 1 CDS1611698 423 + 0.520095
DR1593 transposase, putativechromosome 1 CDS1612107 1227 + 0.523227
DR1600 conserved hypothetical proteinchromosome 1 CDS1622933 708 + 0.677966
DR1618 transposase, putativechromosome 1 CDS1638183 1251 + 0.583533
DR1651 transposase, putativechromosome 1 CDS1674972 1227 - 0.524042
DR1652 transposase, putativechromosome 1 CDS1676185 423 - 0.520095
DR1663 hypothetical proteinchromosome 1 CDS1688948 462 + 0.649351
DR1669 conserved hypothetical proteinchromosome 1 CDS1694319 1119 + 0.703306
DR1696 DNA mismatch repair protein MutLchromosome 1 CDS1718755 1644 + 0.741484
DR1707 DNA-directed DNA polymerasechromosome 1 CDS1729561 2871 - 0.660745
DR1721 hypothetical proteinchromosome 1 CDS1747096 1005 - 0.361194
DR1751 DNA polymerase-related proteinchromosome 1 CDS1778496 714 + 0.708683
DR1757 hypothetical proteinchromosome 1 CDS1785144 987 - 0.614995
DR1771 excinuclease ABC, subunit Achromosome 1 CDS1798940 3051 - 0.657162
DR1775 DNA helicase IIchromosome 1 CDS1804529 2238 + 0.646559
DR1776 MutT/nudix family proteinchromosome 1 CDS1806786 528 - 0.666667
DR1819 UV damage endonuclease, putativechromosome 1 CDS1844356 981 + 0.690112
DR1851 serine/threonine-protein kinase-related proteinchromosome 1 CDS1874710 756 - 0.71164
DR1855 competence protein ComEA-related proteinchromosome 1 CDS1879521 381 - 0.706037
DR1898 conserved hypothetical proteinchromosome 1 CDS1916384 1305 + 0.693487
DR1902 exodeoxyribonuclease V, subunit RecD, putativechromosome 1 CDS1919913 2148 - 0.689479
DR1913 DNA gyrase, subunit Achromosome 1 CDS1932399 2439 + 0.639196
DR1916 DNA helicase RecGchromosome 1 CDS1936853 2355 + 0.667516
DR1921 exonuclease SbcD, putativechromosome 1 CDS1941499 1251 + 0.669065
DR1922 exonuclease SbcCchromosome 1 CDS1942746 2730 + 0.689377
DR1927 transposasechromosome 1 CDS1948515 438 - 0.577626
DR1932 transposase, putativechromosome 1 CDS1953297 423 + 0.520095
DR1933 transposase, putativechromosome 1 CDS1953706 1227 + 0.524042
DR1949 ribonuclease HIIchromosome 1 CDS1971295 639 + 0.735524
DR1976 DNA mismatch repair protein MutS, putativechromosome 1 CDS1997556 2301 - 0.67362
DR2069 DNA ligasechromosome 1 CDS2082742 2103 - 0.680932
DR2074 3-methyladenine glycosidasechromosome 1 CDS2089329 573 - 0.706806
DR2077 hypothetical proteinchromosome 1 CDS2091415 510 + 0.692157
DR2162 conserved hypothetical proteinchromosome 1 CDS2160006 546 + 0.712454
DR2204 MutT/nudix family proteinchromosome 1 CDS2203868 603 - 0.689884
DR2222 transposase, putativechromosome 1 CDS2218906 1251 - 0.583533
DR2272 MutT/nudix family proteinchromosome 1 CDS2270912 519 + 0.649326
DR2275 excinuclease ABC, subunit Bchromosome 1 CDS2272809 2193 + 0.643411
DR2282 conserved hypothetical proteinchromosome 1 CDS2280212 372 + 0.728495
DR2285 A/G-specific adenine glycosylasechromosome 1 CDS2282168 1092 - 0.712454
DR2323 transposase, putativechromosome 1 CDS2321524 423 + 0.520095
DR2324 transposase, putativechromosome 1 CDS2321933 1227 + 0.524042
DR2332 DNA polymerase III subunit, putativechromosome 1 CDS2329986 966 + 0.710145
DR2340 recA proteinchromosome 1 CDS2337795 1092 + 0.661172
DR2349 hypothetical proteinchromosome 1 CDS2347866 813 + 0.697417
DR2356 MutT/nudix family proteinchromosome 1 CDS2354268 435 + 0.636782
DR2374 ribonucleoside-diphosphate reductase-related proteinchromosome 1 CDS2372125 4257 + 0.675123
DR2410 DNA polymerase III, tau/gamma subunitchromosome 1 CDS2410637 1848 + 0.705087
DR2425 hypothetical proteinchromosome 1 CDS2428583 609 - 0.563218
DR2438 endonuclease IIIchromosome 1 CDS2438904 780 - 0.665385
DR2444 nucleic acid-binding protein, putative, HRDC familychromosome 1 CDS2443858 1812 - 0.751656
DR2509 conserved hypothetical proteinchromosome 1 CDS2511918 411 - 0.673966
DR2584 DNA-3-methyladenine glycosidase II, putativechromosome 1 CDS2592593 678 + 0.721239
DR2586 hypothetical proteinchromosome 1 CDS2594117 258 + 0.709302
DRA0065 DNA-binding protein HBchromosome 2 CDS71040 414 + 0.642512
DRA0075 transposase, putativechromosome 2 CDS80554 2130 + 0.657277
DRA0155 integrase/recombinase, putativechromosome 2 CDS156140 1035 + 0.711111
DRA0182 hypothetical proteinchromosome 2 CDS187602 807 + 0.644362
DRA0188 excinuclease ABC, subunit Achromosome 2 CDS194287 2769 - 0.678223
DRA0234 hypothetical proteinchromosome 2 CDS243966 174 - 0.655172
DRA0332 protein kinase, putativechromosome 2 CDS360197 1575 + 0.697778
DRA0369 hypothetical proteinchromosome 2 CDS411019 1209 - 0.612076
DRB0005 transposase, putativeMP1 CDS6495 984 + 0.576219
DRB0020 transposase, putativeMP1 CDS21676 984 - 0.576219
DRB0055 transposase, pseudogeneMP1 CDS63851 201 - 0.517413
DRB0057 transposase, putativeMP1 CDS65291 984 + 0.575203
DRB0059 transposase, putativeMP1 CDS67669 1251 + 0.583533
DRB0102 transposase, putativeMP1 CDS121856 984 - 0.576219
DRB0103 transposase, putativeMP1 CDS123011 1230 + 0.595935
DRB0104 integrase/recombinase XerD, putativeMP1 CDS124398 1035 + 0.641546
DRB0114 transposaseMP1 CDS135452 690 + 0.591304
DRB0117 transposase, putativeMP1 CDS137627 984 + 0.577236
DRB0132 transposaseMP1 CDS152866 690 - 0.592754
DRB0134 transposase, putativeMP1 CDS155958 984 + 0.571138
DRB0136 ATP-dependent helicase HepAMP1 CDS162296 2826 + 0.694268
DRB0145 hypothetical proteinMP1 CDS176244 1194 - 0.595477
DRC0005 resolvaseCP1 CDS4763 558 - 0.594982
DRC0006 conserved hypothetical proteinCP1 CDS5471 735 - 0.57551
DRC0018 integrase/recombinase XerD, putativeCP1 CDS20112 711 + 0.644163
DRC0028 transposase, putativeCP1 CDS28929 1002 - 0.580838
DRC0029 transposase, putativeCP1 CDS30272 867 + 0.569781
DRC0033 transposase, putativeCP1 CDS35342 813 + 0.554736