TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-03 07:54:07

Gene list

Applied filters:

COG category: Replication, recombination and repair
Organism: Streptococcus pneumoniae R6, R6

Number of genes found: 193

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Streptococcus pneumoniae R6, R6
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
DEAD/H DEAD RNA helicasechromosome CDS1322922 1083 + 0.409049
IS1167 Transposase (orf1)chromosome CDS991498 519 - 0.368015
IS1167 Transposase (orf1)chromosome CDS972009 555 - 0.374775
IS1167 Transposase (orf2)chromosome CDS40224 768 - 0.380208
IS1167 Transposase (orf1)chromosome CDS40982 519 - 0.379576
IS1167 Transposase (orf1)chromosome CDS1647556 519 + 0.387283
IS1167 Transposase (orf1)chromosome CDS761883 519 - 0.38343
IS1167-truncation Degenerate transposase (orf2)chromosome CDS761198 405 - 0.367901
IS1167-truncation Degenerate transposase (fusion of orf1 and orf2)chromosome CDS1701075 1230 + 0.372358
IS1167-truncation Degenerate transposase (orf2)chromosome CDS21106 207 - 0.36715
IS1167-truncation Degenerate transposase (orf2)chromosome CDS971764 255 - 0.407843
IS1167-truncation Degenerate transposase (orf2)chromosome CDS990699 519 - 0.371869
IS1167-truncation Degenerate transposase (orf2)chromosome CDS1648355 519 + 0.371869
IS1167-truncation Degenerate transposase (orf2)chromosome CDS761074 141 - 0.347518
IS1167-truncation Degenerate transposase (orf2)chromosome CDS140419 552 - 0.46558
IS1167-truncation Degenerate transposase (orf2)chromosome CDS971225 504 - 0.353175
IS1167-truncation Degenerate transposase (fusion of orf1 and orf2)chromosome CDS1690139 438 + 0.356164
IS1167-truncation Degenerate transposase (orf1)chromosome CDS1671111 783 + 0.380587
IS1167-truncation Degenerate transposase (orf2)chromosome CDS1671890 528 + 0.367424
IS1167-truncation Degenerate transposase (orf1)chromosome CDS29624 393 - 0.351145
IS1239 Transposasechromosome CDS1348371 1008 - 0.399802
IS1239-truncation Degenerate transposasechromosome CDS817081 921 - 0.402823
IS1239-truncation Degenerate transposasechromosome CDS510846 303 + 0.39934
IS1239-truncation Degenerate transposasechromosome CDS1543913 204 + 0.348039
IS1239-truncation Degenerate transposasechromosome CDS623952 144 - 0.381944
IS1381 Tranposase (orf2)chromosome CDS1928807 390 + 0.376923
IS1381 Tranposase (orf2)chromosome CDS840507 390 - 0.379487
IS1381 Tranposase (orf2)chromosome CDS1871057 390 - 0.374359
IS1381 Tranposase (orf2)chromosome CDS1554092 390 - 0.387179
IS1381 Tranposase (orf2)chromosome CDS978562 390 + 0.392308
IS1381-truncation Degenerate transposase (orf2)chromosome CDS1075330 399 - 0.401002
IS1381-truncation Degenerate transposase (orf2)chromosome CDS1194240 264 - 0.375
IS1381-truncation Degenerate transposase (orf2)chromosome CDS39018 294 + 0.380952
IS861-truncation Degenerate transposase (orf2)chromosome CDS496468 390 - 0.382051
IS861-truncation Degenerate transposase (orf2)chromosome CDS1324655 489 - 0.361963
IS861-truncation Degenerate transposase (orf2)chromosome CDS1432048 489 - 0.378323
IS861-truncation Degenerate transposase (orf1)chromosome CDS1433096 273 - 0.285714
IS861-truncation Degenerate transposase (orf2)chromosome CDS876381 243 - 0.386831
IS861-truncation Degenerate transposase (orf2)chromosome CDS352405 186 - 0.322581
IS861-truncation Degenerate transposase (orf1)chromosome CDS747720 213 + 0.267606
IS861-truncation Degenerate transposase (orf2)chromosome CDS1325119 369 - 0.363144
IS861-truncation Degenerate transposase (orf1)chromosome CDS1325713 270 - 0.288889
IS861-truncation Degenerate transposase (orf1)chromosome CDS876623 198 - 0.282828
IS861-truncation Degenerate transposase (orf2)chromosome CDS496934 258 - 0.337209
IS861-truncation Degenerate transposase (orf2)chromosome CDS352538 354 - 0.372881
IS861-truncation Degenerate transposase (orf1)chromosome CDS353339 276 - 0.286232
IS861-truncation Degenerate transposase (orf2)chromosome CDS748235 369 + 0.363144
IS861-truncation Degenerate transposase (orf2)chromosome CDS496379 108 - 0.314815
IS861-truncation Degenerate transposase (orf1)chromosome CDS497417 276 - 0.289855
IS861-truncation Degenerate transposase (orf2)chromosome CDS1432598 273 - 0.340659
IS861-truncation Degenerate transposase (orf2)chromosome CDS748579 489 + 0.368098
alkD-truncation DNA alkylation repair enzyme, truncationchromosome CDS349534 255 + 0.423529
alkD-truncation DNA alkylation repair enzyme, truncationchromosome CDS349807 273 + 0.3663
ccrB Low similarity to site-specific recombinasechromosome CDS926056 1680 + 0.335714
celA Competence proteinchromosome CDS849966 651 + 0.447005
comFA Involved in transformation; required for DNA uptake but not for binding; Related to ATP-dependent RNA/DNA helicaseschromosome CDS2005956 1299 - 0.401078
comX1 Competence-specific global transcription modulatorchromosome CDS14254 480 + 0.372917
comX2 Competence-specific global transcription modulatorchromosome CDS1795146 480 - 0.372917
cshA Chromosome segregation helicasechromosome CDS1589003 1272 + 0.481918
dinG ATP-dependent DNA helicasechromosome CDS710880 2451 + 0.402285
dinP DNA-damage-inducible protein Pchromosome CDS410657 1071 - 0.408964
dnaA DNA biosynthesis, initiation, binding proteinchromosome CDS1 1362 + 0.363436
dnaB Chromosome replication initiation protein/membrane attachment protein, Putativechromosome CDS1537088 1170 - 0.407692
dnaC Replicative DNA helicasechromosome CDS2000715 1353 - 0.414634
dnaE DNA-polymerase III alpha-chainchromosome CDS795966 3129 + 0.392777
dnaG DNA primasechromosome CDS963503 1776 + 0.421734
dnaI Primosome component (helicase loader)chromosome CDS1536191 897 - 0.405797
dnaN DNA biosynthesis; sliding clamp subunit, required for high processivity; DNA polymerase III beta-subunitchromosome CDS1521 1137 + 0.344767
dnaQ DNA polymerase III, epsilon chainchromosome CDS883965 627 + 0.400319
dnaX DNA-directed DNA polymerase III chainchromosome CDS763092 1656 + 0.419686
exoA Exodeoxyribonucleasechromosome CDS1633221 828 + 0.452899
gyrA DNA gyrase subunit Achromosome CDS1095463 2469 - 0.431349
gyrB DNA gyrasechromosome CDS715818 1947 + 0.427838
hexA DNA mismatch repair protein HexAchromosome CDS1865872 2574 - 0.457653
hexB DNA mismatch repair proteinchromosome CDS168072 1950 + 0.46
hlpA Histone-like DNA-binding proteinchromosome CDS998667 276 + 0.405797
holA DNA polymerase III, delta subunitchromosome CDS678831 1038 + 0.388247
holB DNA polymerase III, delta' subunitchromosome CDS836898 891 + 0.413019
ligA DNA ligasechromosome CDS1003486 1959 + 0.44002
mfd Transcription-repair coupling factorchromosome CDS4756 3510 + 0.350142
mutM Formamidopyrimidine-DNA glycosylasechromosome CDS864795 825 + 0.442424
mutS2 DNA mismatch repair proteinchromosome CDS366411 2337 + 0.452289
mutT 7,8-dihydro-8-oxoguanine-triphosphatasechromosome CDS1585068 429 - 0.414918
mutX 8-oxodGTP nucleoside triphosphatasechromosome CDS1050341 465 - 0.44086
mutY Similar to A/G-specific adenine glycosylasechromosome CDS1108363 1176 - 0.427721
nth endonuclease III (DNA repair)chromosome CDS1161041 630 - 0.446032
ogt O6-methylguanine-DNA methyltransferasechromosome CDS1305516 531 - 0.425612
parC Topoisomerase IV subunit Achromosome CDS752241 2481 + 0.439742
parE Topoisomerase IV subunit Bchromosome CDS749887 1944 + 0.451646
pcrA ATP-dependent DNA helicasechromosome CDS979142 2292 + 0.432373
polA DNA polymerase Ichromosome CDS31306 2634 + 0.439256
polC DNA polymerase III, alpha subunitchromosome CDS251074 4392 + 0.444672
priA Primosomal replication factor Ychromosome CDS1561089 2397 - 0.465582
radC DNA repair proteinchromosome CDS981461 696 + 0.41092
recA DNA recombination/repairchromosome CDS1725078 1167 - 0.418166
recD Exonuclease Vchromosome CDS361275 2367 - 0.446557
recF Recombination protein RecFchromosome CDS2022400 1098 + 0.343352
recG Branch migration of Holliday junctions, junction-specific DNA helicasechromosome CDS1520712 2016 - 0.467758
recJ Single-stranded DNA-specific exonuclease, 5'-3'chromosome CDS535289 2235 + 0.435347
recN DNA repair and genetic recombinationchromosome CDS1080001 1668 - 0.417266
recR Recombination protein RecRchromosome CDS1493609 597 - 0.440536
relaxase-truncation Tn5252, relaxase, truncationchromosome CDS939505 558 + 0.318996
rexA First subunit of major exonucleasechromosome CDS1024754 3651 + 0.434128
rexB Second subunit of major exonucleasechromosome CDS1021482 3276 + 0.430098
rheB ATP-dependent RNA helicasechromosome CDS674561 1344 + 0.404762
rnh Ribonuclease Hchromosome CDS1037149 780 + 0.412821
rnhB Ribonuclease HIIchromosome CDS364501 873 - 0.450172
ruvA Holliday junction DNA helicasechromosome CDS174163 594 + 0.434343
ruvB Branch migration of Holliday structureschromosome CDS232128 999 + 0.457457
smf DNA processing Smf proteinchromosome CDS1145894 861 - 0.408827
snf SWF/SNF family ATP-dependent RNA helicasechromosome CDS1356038 3099 - 0.440787
spnII-interrupted-N Uncharacterized restriction enzyme, interrupted-Nchromosome CDS1102916 1878 - 0.350373
spnIM DNA modification methyltransferasechromosome CDS1280629 1179 + 0.273961
spr0036 Conserved hypothetical proteinchromosome CDS36977 771 + 0.416342
spr0123 Conserved hypothetical proteinchromosome CDS131851 483 + 0.440994
spr0176 Conserved hypothetical proteinchromosome CDS184622 420 + 0.416667
spr0252 Hypothetical proteinchromosome CDS255567 264 + 0.397727
spr0325 Hypothetical proteinchromosome CDS324231 450 + 0.435556
spr0333 Conserved hypothetical proteinchromosome CDS337078 1173 + 0.439898
spr0488 Hypothetical proteinchromosome CDS488925 396 + 0.406566
spr0491 Hypothetical proteinchromosome CDS490727 963 + 0.285566
spr0499 Hypothetical proteinchromosome CDS497816 1068 + 0.386704
spr0500 Hypothetical proteinchromosome CDS498905 342 + 0.356725
spr0501 Hypothetical proteinchromosome CDS499462 204 + 0.367647
spr0502 Hypothetical proteinchromosome CDS499631 285 + 0.37193
spr0503 Hypothetical proteinchromosome CDS499939 633 + 0.371248
spr0548 Conserved hypothetical proteinchromosome CDS549483 579 + 0.443869
spr0566 Hypothetical proteinchromosome CDS579191 408 - 0.394608
spr0567 Hypothetical proteinchromosome CDS579666 246 - 0.369919
spr0650 Conserved hypothetical proteinchromosome CDS656822 456 - 0.407895
spr0702 Conserved hypothetical proteinchromosome CDS701973 480 + 0.39375
spr0721 Conserved hypothetical proteinchromosome CDS722359 423 - 0.394799
spr0892 Conserved hypothetical proteinchromosome CDS881755 546 + 0.413919
spr0964 Hypothetical proteinchromosome CDS944613 1893 + 0.27364
spr1056 Hypothetical proteinchromosome CDS1051604 648 - 0.262346
spr1115 Conserved hypothetical proteinchromosome CDS1114899 468 - 0.433761
spr1184 Hypothetical proteinchromosome CDS1182410 438 + 0.383562
spr1205 Conserved hypothetical proteinchromosome CDS1202025 2637 - 0.324991
spr1294 Hypothetical proteinchromosome CDS1290375 462 - 0.419913
spr1296 Hypothetical proteinchromosome CDS1291130 369 - 0.387534
spr1390 Conserved hypothetical proteinchromosome CDS1371422 300 - 0.42
spr1433 Conserved hypothetical proteinchromosome CDS1416910 678 - 0.430678
spr1440 Conserved hypothetical proteinchromosome CDS1423788 1575 - 0.435556
spr1784 Conserved hypothetical proteinchromosome CDS1758014 540 - 0.45
spr1804 Conserved hypothetical proteinchromosome CDS1775501 561 - 0.470588
spr1805 Conserved hypothetical proteinchromosome CDS1776061 774 - 0.45478
spr1855 Conserved hypothetical proteinchromosome CDS1830044 954 - 0.415094
ssbA Single stranded binding proteinchromosome CDS1374841 471 - 0.435244
ssbB Single-stranded DNA-binding proteinchromosome CDS1704481 396 - 0.429293
tag 3-Methyladenine DNA glycosylase I, constitutivechromosome CDS174766 564 + 0.466312
topA DNA topoisomerase Ichromosome CDS1141707 2106 - 0.424976
transposase A Degenerative transposasechromosome CDS886559 366 + 0.357924
transposase A Transposasechromosome CDS20207 348 + 0.367816
transposase A Transposasechromosome CDS1020607 369 - 0.368564
transposase A Degenerative transposasechromosome CDS1333089 216 - 0.398148
transposase A Transposasechromosome CDS1802664 348 - 0.367816
transposase A Degenerative transposasechromosome CDS142041 267 - 0.378277
transposase A Transposasechromosome CDS722874 348 + 0.364943
transposase A Transposasechromosome CDS313115 348 - 0.356322
transposase A Degenerative transposasechromosome CDS86559 177 + 0.350282
transposase B Transposasechromosome CDS1020110 339 - 0.380531
transposase B Transposasechromosome CDS20733 339 + 0.380531
transposase B Degenerate transposasechromosome CDS1332570 300 - 0.376667
transposase B Degenerate transposasechromosome CDS723532 177 + 0.367232
transposase B Degenerate transposasechromosome CDS273609 207 + 0.386473
transposase B Degenerate transposasechromosome CDS312599 162 - 0.364198
transposase B Degenerate transposasechromosome CDS887083 141 + 0.361702
transposase B Transposasechromosome CDS1802161 324 - 0.382716
transposase C Transposasechromosome CDS720316 405 + 0.395062
transposase C Degenerate transposasechromosome CDS651795 654 - 0.391437
transposase D Transposasechromosome CDS720608 654 + 0.385321
transposase D Degenerate transposasechromosome CDS1324163 417 - 0.386091
transposase D Degenerate transposasechromosome CDS1194544 105 + 0.361905
transposase D Degenerate transposasechromosome CDS2009766 180 + 0.366667
transposase E Degenerate transposasechromosome CDS2010201 288 - 0.402778
transposase E Degenerate transposasechromosome CDS1291786 351 - 0.415954
transposase E Transposasechromosome CDS721347 180 - 0.422222
transposase F Degenerate transposasechromosome CDS820292 528 - 0.373106
transposase F Degenerate transposasechromosome CDS408542 549 - 0.435337
transposase F Degenerate transposasechromosome CDS1863387 315 + 0.412698
transposase G-truncation Transposase, uncharacterized, truncationchromosome CDS323782 447 + 0.425056
transposase H Transposase, uncharacterized, truncationchromosome CDS1977112 282 - 0.379433
transposase H Transposase, uncharacterized, truncationchromosome CDS1976116 993 - 0.394763
transposase H-truncation Transposase, uncharacterized, truncationchromosome CDS523125 174 + 0.41954
ung DNA-uracil glycosylasechromosome CDS1050815 669 - 0.439462
uvrA Excinuclease ABC-subunit Achromosome CDS179215 2832 + 0.472811
uvrB Exonuclease ABC-subunit Bchromosome CDS1116467 1989 - 0.451483
uvrC Exonuclease ABC-subunit Cchromosome CDS543591 1845 + 0.444986
xerC Integrase/recombinasechromosome CDS1040078 1071 + 0.380019
xerD Integrase/recombinasechromosome CDS452481 798 - 0.300752
xerD Recombinase, site specificchromosome CDS1662245 741 - 0.426451
xseA Exodeoxyribonuclease large subunitchromosome CDS1083969 1347 - 0.433556
xseB Exodeoxyribonuclease small subunitchromosome CDS1083779 213 - 0.408451